A new species of Late Pleistocene rail (Aves: Rallidae) from Abaco, the Bahamas

We describe a new species of rail from the Sawmill Sink blue hole on Abaco Island in the northern Bahamas. Known from abundant, beautifully preserved Late Pleistocene fossils, Rallus cyanocavi sp. nov. was a medium-sized, flightless species that probably was endemic to the Little Bahama Bank, which is a carbonate platform surrounded by deeper water. We are uncertain whether R. cyanocavi survived into the Holocene, when higher sea levels transformed the Little Bahama Bank from a single large, Late Pleistocene island (ca. 12000 km²) to the scattering of smaller islands seen today, the largest of which is Abaco (1681 km²). Fossils of additional extinct, flightless species of Rallus probably await discovery on some of the 21 other carbonate banks that span the Bahamian Archipelago.     

Phylogeography of the Alcippe morrisonia (Aves: Timaliidae): long population history beyond late Pleistocene glaciations

Background  

The role of Pleistocene glacial oscillations in current biodiversity and distribution patterns varies with latitude, physical topology and population life history and has long been a topic of discussion. However, there had been little phylogeographical research in south China, where the geophysical complexity is associated with great biodiversity. A bird endemic in Southeast Asia, the Grey-cheeked Fulvetta, Alcippe morrisonia, has been reported to show deep genetic divergences among its seven subspecies. In the present study, we investigated the phylogeography of A. morrisonia to explore its population structure and evolutionary history, in order to gain insight into the effect of geological events on the speciation and diversity of birds endemic in south China.     

Global diversity of freshwater birds (Aves)

Among the 10,000 birds species living on earth, 5% (e.g., 560) need imperatively freshwater habitat in order to satisfy at least one of their life history traits. About 11 completed families could even disappear if their wetland habitat left. About 10% (58) of these can be considered as endemic. Africa contains the biggest number of endemic (20) and more precisely Madagascar. Among freshwater species, ducks and geese have a major importance in human activities in northern hemisphere related to food resources (hunting) or birding. Guest editors: E.V. Balian, C. Lévêque, H. Segers & K. Martens Freshwater Animal Diversity Assessment     

The Anatidae and Scolopacidae (Aves: Anseriformes,Charadriiformes) from the late Neogene of Gargano,Italy

The late Neogene (MN13-14) fissure fillings found in the limestone quarries near Apricena (Foggia, Southern Italy) contain a well-diversified fossil bird assemblage. Most of the bird taxa show endemic characteristics following the high degree of insularity of the whole vertebrate assemblage. In addition to the endemic taxa, some non-endemic forms are present, mostly only recently found after the still ongoing revision of the whole bird remains. Here the remains of Anatidae and Scolopacidae are presented. This analysis reveals the occurrence of at least two taxa of Anatidae, Anas velox and Anatidae indet., and two taxa of Scolopacidae, Calidris sp. and an Scolopacidae indet. In addition, some remains are determined as Charadriiformes indet., but they probably represent more than one taxon, even if their bad status of preservation does not allow any further consideration. The detailed study of these remains and their comparison with the other European Neogene taxa already described is carried out.     

The Casal de' Pazzi archaic parietal: comparative analysis of new fossil evidence from the late Middle Pleistocene of Rome

A fossilized fragment of human parietal bone has been recently recovered from the lowest layer of the Casal de' Pazzi fluvial deposit (stratigraphically dated at about 200–250 ky BP). The fossil presents characters-i.e., thickness, degree and development of curvature, type of endocranial vascularization-which distinguish it from the corresponding cranial regions of both Homo erectus and anatomically modern Homo sapiens. While a morphological orientation towards Neanderthal characters can be considered, the affinities of the Casal de' Pazzi parietal are primarily with other late Middle Pleistocene specimens. The authors conclude that the Casal de' Pazzi human find can be assigned to the “archaic Homo sapiens” group falling within the European pre-Neanderthal range. Its particular morphology constitutes new evidence of human evolution from the geographical area of Rome.     

The craniofacial air sac system of Mesozoic birds (Aves)

Birds are characterized by pneumatization of their skeletons by epithelial diverticula from larger, air—filled cavities. The diverticula—or 'air sacs'—that invade the postcranium result from outgrowths of the lungs; postcranial pneumaticity has been very well studied. Much more poorly understood are the air sacs that pneumatize the skull. Study of craniofacial pneumaticity in modern birds (Neornithes) indicates the presence of two separate systems: nasal pneumaticity and tympanic pneumaticity. The lacrimal and maxillary bones are pneumatized by diverticula of the main paranasal cavity, the antorbital sinus. There are five tympanic diverticula in neornithines that pneumatic the quadrate, articulare and the bones of the braincase. The pneumatic features of the following six genera of Mesozoic birds are examined: Archaeopteryx, Enaliornis, Baptornis, Parahesperornis, Hesperornis and Ichthyornis. Despite the 'archaic' aspect of most of these birds, many of the pneumatic features of neornithines are found in Mesozoic birds and are considered primitive for Aves. The phylogenetic levels at which most of the avian pneumatic features arose within Archosauria are uncertain. Until the phylogenetic levels at which homologous pneumatic features arose are determined, it is unwise to use most pneumatic characters in the discussion of avian origins. Within avian phylogeny, Ornithurae and Neornithes are well–supported by pneumatic synapomorphies. There is a trend towards reduction of craniofacial pneumaticity within Hesperornithiformes. Within Neornithes, four derived pneumatic characters suggest that the Palaeognathae (ratites and tinamous) is monophyletic.     

亚洲最古老鸽子(Columbidae)物种有效性再检验：北京周口店早更新世丛氏原鸽(Columba congi)（英文）

丛氏原鸽(Columba congi)出土于周口店北京猿人遗址早更新世第12地点(～1.7 Ma)。丛氏原鸽共出土11件骨骼碎片,但是由于年代久远,仅遗存4件肱骨标本,且遗存标本的形态学特征并不支持最初的物种鉴定特征。对遗存的4件肱骨标本进行了重新描述和对比,其肱骨气窝腹侧外缘平直和背髁上突位于肱骨更远端的位置这两个特征或为作为灭绝鸽类物种的丛氏原鸽提供稳定的识别特征。丛氏原鸽是亚洲地区已知最古老的鸽属化石,推测其生存于温暖且潮湿的森林环境。对丛氏原鸽的研究或能为解决鸽属物种的古生物地理分布以及目前广泛分布的原鸽的起源等问题提供帮助。     

A new earthworm trace fossil from paleosols: Aestivation chambers from the Late Pleistocene Sopas Formation of Uruguay

A new ichnotaxon, attributed to earthworm aestivation chambers, is described from paleosols of the Sopas Formation (Upper Pleistocene) of northern Uruguay. This ichnofossil consists of a spherical chamber with a constructed wall of imbricated faecal pellets and a filling of rounded to meniscate pellets arranged in winding strings. The strings may also be connected to specimens of Taenidium serpentinum in the paleosol, resulting in a compound trace fossil. Castrichnus incolumis igen. et isp. nov. is interpreted as an earthworm aestivation chamber based on its morphological similarity to the chambers produced by extant earthworms. As such, C. incolumis is considered an indicator of subaerial exposure, and also of seasonal climate. C. incolumis is the second trace fossil that can be attributed with certainty to earthworms. In addition, the Castrichnus–T. serpentinum compound specimens indicate that in paleosols, earthworms can be the producers of T. serpentinum. Aestivation chambers would represent a new ethological category.     

Two new species of Grindelia (Astereae,Asteraceae) from Uruguay

Taxonomic revision of South American species ofGrindelia Willd. has revealed two new species from Uruguay:G. rupestris, an erect subshurb with crowded obovate denticulate leaves, subsessile heads, and pappus composed of numerous awns, andG. linearifolia, a prostrate shrublet with small entire linear leaves. Both species are described and illustrated. A key for the UruguayanGrindelia species is provided.     

A phylogenetic supertree of oscine passerine birds (Aves: Passeri)

Oscine passerine birds make up almost half of all avian diversity. Relationships within the group, and its classification, have long been controversial. Over the last 10 years numerous molecular phylogenies have been published. We compiled source phylogenies from 99 published studies to construct an oscine supertree. We aimed to illustrate weak and strong parts of the phylogeny and set targets for future phylogenetic work and therefore preferred a heuristic approach where we judged the adequacy of taxon sampling and molecular method of each source tree instead of using matrices and automated tree-building programs. We present an estimate of the phylogenetic relationships of 1723 extant and one extinct species of oscine passerine birds (Aves: Passeri) — more than 37% of the total. We included 34/35 (97%) families, 38/39 (97%) subfamilies and 40/43 (93%) tribes. Overall resolution is 83% of a fully bifurcating tree. The basal lineages are all distributed in the Australo-Papuan region, but several more distal lineages dispersed out of this region and radiated in other parts of the world. However, taxa of the Australian region suffer from larger evolutionary gaps and the deep branches of the Sylvioidea and nine South American primaried oscines are still poorly resolved.     

Mammalian Carnivore Coprolites from the Sopas Formation (Upper Pleistocene,Lujanian Stage), Uruguay

Continental tetrapod coprolites from Uruguay are described for the first time. These remains come from the Piedra Pintada locality (Artigas Department), northern Uruguay, where the Sopas Formation crops out (Upper Pleistocene, Lujanian Stage). It was possible to identify several attributes indicative of a coprolitic origin, such as anisopolar shape, extrusion marks, pointed ends, sutures, gas bubbles, and inclusions. These specimens are assigned to carnivorous mammals, probably large felids, based on morphological attributes and inclusions of rodent bones and teeth.     

Stephanorhinus hundsheimensis (Mammalia,Rhinocerotidae) from the late early Pleistocene deposits of the Denizli Basin (Anatolia,Turkey)

Pleistocene rhinoceroses are poorly documented in Turkey where they have been reported only from the late early Pleistocene (1.3–1.1 Ma) travertine deposits of the Denizli Basin. In this work, new rhinoceros remains collected from this basin are assigned to a relatively large-sized Stephanorhinus hundsheimensis on the basis of their morphology and morphometry. The first Turkish record of this species is approximately coeval with the first appearance of S. hundsheimensis in Europe, chronologically referred to the late early Pleistocene, ca. 1.2 Ma. During that time, S. etruscus still survived in Iberian Peninsula, central Italy and Dacian Basin. The presence of two successive evolutionary morphs for S. hundsheimensis during the Pleistocene is not confirmed.     

DNA barcodes provide new evidence of a recent radiation in the genus Sporophila (Aves: Passeriformes)

The capuchinos are a group of birds in the genus Sporophila that has apparently radiated recently, as evidenced by their lack of mitochondrial genetic diversity. We obtained cytochrome c oxidase I (COI) sequences (or DNA barcodes) for the 11 species of the group and various outgroups. We compared the patterns of COI variability of the capuchinos with those of the largest barcode data set from neotropical birds currently available (500 species representing 51% of avian richness in Argentina), and subjected COI sequences to neighbour-joining, maximum parsimony and Bayesian phylogenetic analyses as well as statistical parsimony network analysis. A clade within the capuchinos, the southern capuchinos, showed higher intraspecific and lower interspecific divergence than the remaining Argentine species. As most of the southern capuchinos shared COI haplotypes and pairwise distances within species were in many cases higher than distances between them, the phylogenetic affinities within the group remained unresolved. The observed genetic pattern is consistent with both incomplete lineage sorting and gene flow between species. The southern capuchinos constitute the only large group of species among the neotropical birds barcoded so far that are inseparable when using DNA barcodes, and one of few multispecies avian groups known to lack reciprocal monophyly. Extending the analysis to rapidly evolving nuclear and mitochondrial markers will be crucial to understanding this radiation. Apart from giving insights into the evolution of the capuchinos, this study shows how DNA barcoding can rapidly flag species or groups of species worthy of deeper study.     

A new elephant fossil from the late Pleistocene of Alghero: The puzzling question of Sardinian dwarf elephants

Endemic elephants, variously reduced in size, have been reported from a number of Mediterranean islands. Most of these originated from the mainland species Palaeoloxodon antiquus. A few dwarf mammoth remains are recorded from Crete and Sardinia. In Sardinia, a largely incomplete skeleton and a few mammoth teeth have been reported from localities believed to range in age from the late middle to the late Pleistocene. The chronology of colonisation by the ancestral species, the actual persistence through time of Mammuthus lamarmorai on the island, and the morphological and dimensional range of the species are, however, poorly known. This research aims to describe a distal portion of a left tibia of a dwarf elephant found in the Alghero area (NW Sardinia), showing some morphological traits and dimensions consistent with those of the endemic Sardinian mammoth (Mammuthus lamarmorai). The main unanswered questions about chronology, colonisation and population dynamics of endemic Sardinian elephants are highlighted and briefly discussed.     

Improved COI barcoding primers for Southeast Asian perching birds (Aves: Passeriformes)

The All Birds Barcoding Initiative aims to assemble a DNA barcode database for all bird species, but the 648-bp 'barcoding' region of cytochrome c oxidase subunit I (COI) can be difficult to amplify in Southeast Asian perching birds (Aves: Passeriformes). Using COI sequences from complete mitochondrial genomes, we designed a primer pair that more reliably amplifies and sequences the COI barcoding region of Southeast Asian passerine birds. The 655-bp region amplified with these primers overlaps the COI region amplified with other barcoding primer pairs, enabling direct comparison of sequences with previously published DNA barcodes.     

The palaeoecology of the micromammals from the late middle Pleistocene site of Hoedjiespunt 1 (Cape Province, South Africa)

The palaeontological site of Hoedjiespunt 1 (HDP1) represents a fossilized hyaena lair. A rich mammalian fauna, including four hominid teeth, has been recovered from the site. Micromammals were recovered from the same sediments as the larger fauna. Taphonomic analysis suggests that the micromammal assemblages from HDP1 were accumulated by a barn owl. The barn owl produces micromammal assemblages that provide a broad sample of micromammals, within a certain size range, living in the hunting area of the owl. There are size-related and other biases inherent in the prey selection of this predator, and owls may roost in one area and hunt in another however, the barn owl has frequently been found to provide a better indication of micromammals living within an area than trapping. The micromammals from HDP1 were used to reconstruct the microhabitats in the vicinity of the site. Two taxonomic habitat indexes were used to assess the environment and dominant habitat types at Hoedjiespunt 1. The variability and adaptability of many of the southern African micromammals complicates interpretation of the results, however, it appears that the micromammals from the HDP1 fossil assemblages utilized habitats of open, scrub vegetation, and rocky and sandy areas. It is suggested that the environment was not markedly different from today, but it may have been relatively more arid. A comparison between HDP1 and other fossil sites in the area dating from the terminal Pleistocene to the Holocene indicates that HDP1 is lacking certain species that are common to all the other west coast fossil sites. There is some discrepancy in the environment indicated by the large mammals as compared that indicated by to the micromammals at the site. It is suggested that this discrepancy may reflect the fact that an owl is likely to have hunted in the vicinity of the hyaena den, probably in the more open areas around the roost site, whereas the macrofauna, accumulated by the further-ranging brown hyaena (Hyaena brunnea), represents environments from further afield.     

Late Pleistocene and Holocene chitons (Mollusca, Polyplacophora) from Uruguay: Palaeobiogeography and palaeoenvironmental reconstruction in mid latitudes of the southwestern Atlantic

Here we present a revision of the fossil record of chitons (Mollusca, Polyplacophora) of Late Pleistocene and Holocene marine deposits of Uruguay and discuss their potential for palaeoenvironmental reconstruction. Chitons were recorded as isolated valves in bivalve- and gastropod-rich assemblages. They are represented by the species Chaetopleura angulata (Spengler), C. isabellei (d’Orbigny), C. asperrima (Gould) and Ischnochiton striolatus (Gray). The last two species are recorded for the first time as fossils not only in Uruguay but also in South America. Exclusively recorded for the Late Pleistocene is the warm water species I. striolatus, whose current southern range limit is located in Santa Catarina, Brazil. Higher temperatures than at present are inferred for the Uruguayan coast during the Late Pleistocene, probably driven by the southward influence of the warm Brazilian Current along the eastern margin of South America. Chitons from Holocene deposits show a wider geographic distribution along the Uruguayan coast in comparison to current distributions. They are recorded where an estuarine and eurihaline fauna lives today, which suggests the former existence of marine conditions. This is explained by the westward displacement of the marine front in the Uruguayan coast during the Holocene transgressive events. Chitons have proven to be useful palaeoenvironmental proxies for the reconstruction of salinity and temperature trends in the Uruguayan coast during the climatic oscillations of the Late Pleistocene and Holocene epochs. As such, their patterns of distribution are related to the recent physical evolution of the Southwestern Atlantic Ocean.