Deer of the genus <Emphasis Type="Italic">Megaloceros</Emphasis> (Mammalia,Cervidae) from the Early Pleistocene of Ciscaucasia

A new deer species, Megaloceros stavropolensis sp. nov., from the pre-Apsheronian sandy–clayey deltaic deposits of the Georgievsk sand pit (village of Podgornoe, Stavropol Region) is described. The fauna of large and small mammals from the bone beds of this locality is dated terminal Villanian, end of the MNQ 17 Zone, beginning of the Late Villafranchian, and assigned to the beginning of the Psekups Mammalian Assemblage. This is the earliest known member of the genus, which possesses antlers with well-developed palmation. The middle tine is absent and the posterior tine is a part of the antler palmation. Other specimens of Early Pleistocene Megaloceros are represented by fragments.     

Identification of pregnancy-associated glycoproteins and alpha-fetoprotein in fallow deer (Dama dama) placenta

Background

This paper describes the isolation and characterization of pregnancy-associated glycoproteins (PAG) from fetal cotyledonary tissue (FCT) and maternal caruncular tissue (MCT) collected from fallow deer (Dama dama) pregnant females. Proteins issued from FCT and MCT were submitted to affinity chromatographies by using Vicia villosa agarose (VVA) or anti-bovine PAG-2 (R#438) coupled to Sepharose 4B gel. Finally, they were characterized by SDS-PAGE and N-terminal microsequencing.

Results

Four distinct fallow deer PAG (fdPAG) sequences were identified and submitted to Swiss-Prot database. Comparison of fdPAG with PAG sequences identified in other ruminant species exhibited 64 to 83% identity. Additionally, alpha-fetoprotein was identified in fetal and maternal tissues.

Conclusion

Our results demonstrate the efficacy of VVA and bovine PAG-2 affinity chromatographies for the isolation of PAG molecules expressed in deer placenta. This is the first report giving four specific amino acid sequences of PAG isolated from feto-maternal junction (FCT and MCT) in the Cervidae family.     

Phylogeography and founder effect of the endangered Corsican red deer (<Emphasis Type="Italic">Cervus elaphus corsicanus</Emphasis>)

Red deer (n = 149) from eight geographical locations, including the endangered endemic populations from the Tyrrhenian islands (Sardinia and Corsica), were analysed at eight polymorphic microsatellite loci. Two questions were addressed: (1) Is there a founder effect in the Corsican population, which was reintroduced to the island using Sardinian deer after the species’ extinction on Corsica? (2) What is the origin of the Tyrrhenian or Corsican red deer (Cervus elaphus corsicanus)? Our results showed signs of a founder effect for the red deer on Corsica in that these deer showed differentiation from the Sardinian population as measured by F_ST values, assignment tests (with and without a priori definition of populations) and individual-based dendrograms. Genetic variability, however, did not differ significantly between the two populations. With respect to the phylogeography of C. e. corsicanus we found that both deer from North-Africa and Mesola on the Italian mainland were genetically close to the Corsican red deer, but phylogenetic trees based on genetic distances were only poorly supported statistically. Among all populations studied the Mesola red deer showed the lowest distance values from Corsican red deer and yielded allele frequencies that were more similar to those of C. e. corsicanus than were those of North-African red deer. These results are in line with recent palaeontological and archaeozoological findings which suggest that the Corsican red deer is derived from small Italian red deer introduced from the mainland to Sardinia and Corsica during the Late Neolithic and just before the beginning of Classical Antiquity, respectively. They also suggest a possible recent introduction of Tyrrhenian red deer to North-Africa (rather than the other way around), thus accounting for the close genetic relationship (especially based on mitochondrial DNA) that has repeatedly been found between C. e. corsicanus and C. e. barbarus.     

Evidence for diversification of <Emphasis Type="Italic">Calophyllum</Emphasis> L. (Calophyllaceae) in the Neogene Siwalik forests of eastern Himalaya

Here, we report fossil leaves, woods, and pollen grains comparable to Calophyllum L. (mainly to Calophyllum inophyllum L. and Calophyllum polyanthum Wall. ex Choisy) of Calophyllaceae from the upper (Kimin Formation, late Pliocene-early Pleistocene), middle (Subansiri Formation, Pliocene) Siwalik sediments of the Arunachal sub-Himalaya, and lower (Gish Clay Formation of Sevok Group; middle to late Miocene) Siwalik sediments of the Darjeeling foothills, eastern Himalaya. Their presence indicates a warm and humid tropical environment in the region during the period of Siwalik sedimentation. Considering all records of Calophyllum, it is suggested that Calophyllum was a frequent forest element throughout the period of Siwalik sedimentation during the Neogene (Miocene time). At present, C. polyanthum grows in the eastern Himalaya, but C. inophyllum is totally absent from north-eastern regions suggesting differential adaptability of these taxa to changing ecoclimatic conditions. Distinct climate change in the area, possibly related to the Himalayan Orogeny during Miocene–Pleistocene times, might have caused the disappearance of C. inophyllum from the entire eastern Himalaya and north-east Indian plains and a move to littoral/coastal and swampy forests of India and other adjoining south-east Asian regions, Polynesia, and the east coast of Africa. The past global distribution of Calophyllum is also discussed, and it is suggested that India may have been its primary centre of origin. This is the first time Cenozoic fossil leaves Calophyllum siwalikum Khan, R.A.Spicer & Bera, sp. nov. comparable to C. inophyllum are described using the both macro- and micromorphological characters.     

On the history of <Emphasis Type="Italic">Brasenia</Emphasis> Schreb. in the European Pleistocene

Brasenia Schreb. is a monotypic genus in the Cabombaceae, present nowadays on all continents except Europe and Antarctica. This thermophilous aquatic plant, which originated in the Tertiary, was a frequent element of aquatic plant life during the interglacial stages of the European Pleistocene. A systematic review of the palaeobotanical records of Brasenia pollen and seeds reveals its history in Europe from the Plio-Peistocene until the Eemian interglacial. Remains of Brasenia were typical for the climatic optima during each of these stages of the Pleistocene. In this paper the diversity of fossil Brasenia species is also shown. The most abundant and morphologically diverse seeds were found in sediments from eastern European sites. Brasenia species became extinct in Europe at the end of the last interglacial or at the beginning of the Weichselian glaciation. Different scenarios for their disappearance are proposed, including the specificity of the floral cycle, probable poor dispersal of seeds, or the scarcity of suitable water bodies for it to survive.     

Molecular identification of two Sarcocystis species in fallow deer (Dama dama) from Lithuania

Due to the lack of molecular research conducted, little is known about Sarcocystis species diversity in the fallow deer (Dama dama). Until now, Sarcocystis jorrini and Sarcocystis morae were described to form sarcocysts in the muscles of this host. In the present study diaphragm muscle samples of free-ranging fallow deer from Lithuania were investigated for Sarcocystis species. Sarcocysts were detected in 39 out of 48 (81.3%) fallow deer examined. Under a light microscope two types of sarcocysts having hair-like and finger-like protrusions were observed. Based on DNA sequence analysis of cox1 and 18S rDNA, two species, S. morae and Sarcocystis entzerothi were identified. In prior studies, the latter species was only detected in Lithuanian roe deer (Capreolus capreolus) and in sika deer (Cervus nippon). The haplotype network of S. morae sequences specified close relationships between haplotypes found in the same country. According to current knowledge, the fallow deer is characterised by low Sarcocystis species richness as compared with other cervid species from Europe.     

Genetic diversity and genetic structure of the Siberian roe deer (<Emphasis Type="Italic">Capreolus pygargus</Emphasis>) populations from Asia

Background

The roe deer, Capreolus sp., is one of the most widespread meso-mammals of Palearctic distribution, and includes two species, the European roe deer, C. capreolus inhabiting mainly Europe, and the Siberian roe deer, C. pygargus, distributed throughout continental Asia. Although there are a number of genetic studies concerning European roe deer, the Siberian roe deer has been studied less, and none of these studies use microsatellite markers. Natural processes have led to genetic structuring in wild populations. To understand how these factors have affected genetic structure and connectivity of Siberian roe deer, we investigated variability at 12 microsatellite loci for Siberian roe deer from ten localities in Asia.

Results

Moderate levels of genetic diversity (H _E = 0.522 to 0.628) were found in all populations except in Jeju Island, South Korea, where the diversity was lowest?(H _E?= 0.386). Western populations showed relatively low genetic diversity and higher degrees of genetic differentiation compared with eastern populations (mean Ar = 3.54 (east), 2.81 (west), mean F _ST = 0.122). Bayesian-based clustering analysis revealed the existence of three genetically distinct groups (clusters) for Siberian roe deer, which comprise of the Southeastern group (Mainland Korea, Russian Far East, Trans-Baikal region and Northern part of Mongolia), Northwestern group (Western Siberia and Ural in Russia) and Jeju Island population. Genetic analyses including AMOVA (F _RT = 0.200), Barrier and PCA also supported genetic differentiation among regions separated primarily by major mountain ridges, suggesting that mountains played a role in the genetic differentiation of Siberian roe deer. On the other hand, genetic evidence also suggests an ongoing migration that may facilitate genetic admixture at the border areas between two groups.

Conclusions

Our results reveal an apparent pattern of genetic differentiation among populations inhabiting Asia, showing moderate levels of genetic diversity with an east-west gradient. The results suggest at least three distinct management units of roe deer in continental Asia, although genetic admixture is evident in some border areas. The insights obtained from this study shed light on management of Siberian roe deer in Asia and may be applied in conservation of local populations of Siberian roe deer.

     

A Middle Pleistocene Sea Otter from Northern California and the Antiquity of <Emphasis Type="Italic">Enhydra</Emphasis> in the Pacific Basin

Extant sea otters (Enhydra lutris) are remarkably well understood in terms of behavior, ecology, and interactions with humans, but the evolutionary history of this charismatic marine mammal is limited owing to a fragmentary fossil record. Disagreements over the generic assignment of various fossil otter remains to members of the tribe Enhydrini, and limited geochronologic data for these records have impeded attempts to interpret the evolutionary biogeography of Enhydra. A well-preserved femur of Enhydra sp. from a middle Pleistocene horizon within the Merced Formation of northern California is the oldest record of Enhydra in the Pacific with robust geochronologic age control. Bracketing ⁸⁷Sr/⁸⁶Sr dates indicate an age of 620–670 ka. Reappraisal of the geochronologic age of various occurrences of Enhydrini indicate dispersal of Enhydra into the Pacific through the Bering Strait no earlier than the middle Pleistocene. Somewhat older early Pleistocene fossils of Enhydra from Alaska and England suggest an Arctic or North Atlantic origin of the Enhydra lineage.     

The earliest musk deer of the genus <Emphasis Type="Italic">Moschus</Emphasis> and their significance in clarifying of evolution and relationships of the family Moschidae

Moschus grandaevus Schlosser, the most ancient musk deer, is recorded from two Late Miocene localities in the south of Eastern Siberia, Olkhon Island (Lake Baikal) and Taralyk-Cher near Kyzyl (Tuva). The morphological study of the species elucidates the origin, evolution, and relationships of the genus Moschus and the entire family Moschidae. A new classification of the Moschidae is proposed.     

New paleobiogeographical and paleoenvironmental insight through the Tortonian brachiopod and ichnofauna assemblages from the Mediterranean-Atlantic seaway (Guadix Basin,SE Spain)

The paleogeography of the Late Neogene Atlantic-Mediterranean seaway via the Betic-Rifean Domain is quite complex due to the presence of several marine corridors. The study of transitional basins in these seaways is crucial to understand the configuration and evolution of the Mediterranean-Atlantic inter-connection. A mixed skeletal-siliciclastic sandstone succession located in one of these transitional areas (Guadix Basin, Southern Spain) was studied from a comprehensive paleontological standpoint focused on the main benthic assemblages (foraminifera, brachiopods, and trace fossils), integrating the data with the study of planktic foraminifera for an accurate biostratigraphic framework. Brachiopods are mostly represented by the Aphelesia-Gryphus assemblage. Two trace fossil assemblages were observed, dominated by Ophiomorpha with Bichordites (1) and Macaronichnus (2), respectively. The benthic foraminiferal assemblage is mostly represented by Planulina and Cibicides. The data gathered from the benthic communities reveal habitats with high-energy and turbulent conditions in an outer neritic-upper bathyal bathymetric range. Brachiopods from the Alicún section show a Mediterranean paleobiogeographic affinity. They were constrained in the Late Tortonian to the restricted basins of the Betic-Rifean Seaway and after the Messinian Salinity Crisis proliferated in both Mediterranean- and Atlantic-type basins of the Betic-Rifean Domain. The Guadix Basin contributed to the Mediterranean-Atlantic faunal inter-connection through the Betic-Rifean Seaway during the Late Tortonian and facilitated the earliest Pliocene expansion of brachiopods in the Mediterranean.     

Revision of Late Pleistocene and Holocene Galliformes Fauna from the Crimean Mountains

The Late Pleistocene and Holocene Galliformes faunas from the Crimean Mountains included seven species of birds belonging to the families Phasianidae and Tetraonidae: Phasianus colchicus, Alectoris chukar, Perdix perdix, Coturnix coturnix, Lyrurus tetrix, Lagopus mutus, and Lagopus lagopus. The habitation of Gallus representatives in the Crimea in the Late Pleistocene has not been confirmed. Representatives of the family Phasianidae were present in the Crimean fauna at least for most of the Late Pleistocene. All of them survived until the Late Holocene. Pheasants became extinct around the eighteenth century, and the rock partridge seems to have disappeared only in the first half of the twentieth century. The species were restored in the Crimea in the second half of the twentieth century. Gray partridges were common resident birds of the Crimean Mountains throughout the Late Pleistocene and Holocene. Quail was not a numerous breeding species of the Crimean Mountains at the same time, but mass migration of this species through the Crimea appeared only at the end of the Late Pleistocene and evolved over the Holocene warming. Species of Tetraonidae appeared in the fauna of the Crimea long before the beginning of the cold-phase maximum of the last glaciations but no later than 28000 years ago and became extinct in the Early Holocene warming but no later than 9000 years ago.     

A Finding of the Red Squirrel (Rodentia,Sciuridae, <Emphasis Type="Italic">Sciurus vulgaris</Emphasis> Linnaeus, 1758) and Forest Dormouse (Rodentia,Gliridae, <Emphasis Type="Italic">Dryomys nitedula</Emphasis> Linnaeus, 1778) in the Pleistocene of the Southern Urals

The study deals with a new sample of the mammalian fossils from the Pleistocene deposits of the Ignatievskaya Cave in Southern Urals (54°53' N, 57°46' E). Among the rodent fossils, the teeth of red squirrel (Sciurus vulgaris) and forest dormouse (Dryomys nitedula) have been identified. The enamel differentiation quotient (SDQ) of the water vole teeth matches the Arvicola terrestris species from locations of the end of Middle and Late Pleistocene (oxygen isotope stages, OIS 6 and OIS 5–2, respectively). The high SDQ value for the water vole and the presence of the squirrel and dormouse in the fauna allow dating the finding near the end of the Middle Pleistocene and beginning of the Late Pleistocene (OIS 6 and OIS 5e, respectively). The widespread open and forest landscapes were inhabited by this fauna.     

Systematics and Acceleration of Cranial Evolution in <Emphasis Type="Italic">Cerradomys</Emphasis> (Rodentia,Cricetidae, Sigmodontinae) of Quaternary Sandy Plains in Southeastern Brazil

The genus Cerradomys, comprising eight species, is distributed mainly in transitional, dry, open and inland South American biomes like Caatinga, Cerrado, and Chaco. However, Cerradomys goytaca is restricted to very harsh ecosystems along the Quaternary coast sandy plains (restingas) of the Rio de Janeiro and Espírito Santo states, in southeastern Brazil. Cytochrome b and IRBP DNA data were used for elucidating the phylogenetic relationships of Cerradomys and estimating the time of divergence of different evolutionary lineages, while morphometric analyses were carried out for analyzing the rate of phenotypic evolution. Our findings showed that the first speciation events occurred in the Pliocene and early Pleistocene, leading to the C. marinhus, C. maracajuensis, and C. scotti distributed in central and western Brazil while species from eastern Brazil (C. langguthi, C. vivoi, C. subflavus, and C. goytaca) originated in the middle to late Pleistocene. Cerradomys goytaca populations diverged from inland C. subflavus ca. 0.29 MYBP with an accelerated rate of phenotypic evolution resulting in unique craniometric attributes, likely due to the strong selective pressures imposed by harsh habitats.     

Shell Microstructure of <Emphasis Type="Italic">Rhynchonella loxiae</Emphasis> Fischer (Brachiopoda,Rhynchonellida) from the Upper Volgian of Moscow Region

The shell microstructure of Late Jurassic rhynchonellids of the family Rhynchonellidae from the boreal basin of the Russian Platform is studied for the first time. The studied rhynchonellids differ in the shell microstructure from the Late Jurassic and Early Cretaceous rhynchonellids of the families Cyclothyrididae, Praecyclothyrididae, Basiliolidae, and Norellidae from the warm-water Mediterranean basin. The revealed peculiarities of shell structure of Rhynchonella loxiae (type species of Rhynchonella) may be added to the diagnosis of Rhynchonella and should be considered in characterizing the family Rhynchonellidae.     

Distribution and range expansion of deer in Ireland

• 1 Throughout Europe, the range of many deer species is expanding. We provide current distribution maps for red deer Cervus elaphus, sika Cervus nippon, fallow deer Dama dama and muntjac deer Muntiacus sp. in Ireland, and estimates of range expansion rates for red deer, sika and fallow deer.
• 2 There was a considerable expansion in the ranges of red deer, sika and fallow deer between 1978 and 2008. The compound annual rate of expansion was 7% for red deer, 5% for sika and 3% for fallow deer. The total range increase was 565% for red deer, 353% for sika and 174% for fallow deer. The potential implications of these expansions are discussed.
• 3 There are unknown numbers of red‐sika hybrid deer in some parts of Ireland. Range expansion is likely to lead to further hybridizations with implications for the genetic integrity of deer stocks.
• 4 Sightings of free‐roaming muntjac deer were first recorded in 2007. The distribution of confirmed sightings of single and multiple animals in the eastern region of Ireland suggests multiple releases.
• 5 Deer are already impacting on both the economic and biodiversity values of habitats in Ireland, where, at present, no sustainable deer management policy exists.

     

Functional Anatomy of the Forelimb of <Emphasis Type="Italic">Plesiotypotherium achirense</Emphasis> (Mammalia,Notoungulata, Mesotheriidae) and Evolutionary Insights at the Family Level

In the present work, we provide muscular reconstruction and we infer functional properties of the forelimb of Plesiotypotherium achirense, a fossil mesotheriid notoungulate from the late Miocene of Achiri (Bolivia). This locality has yielded the widest sample ever available for the forelimb of a mesotheriid. In addition, we propose a qualitative comparison of the forelimb (osteology and myology) at the family level, including the Miocene–Pleistocene mesotheriines Mesotherium cristatum, Plesiotypotherium achirense, Caraguatypotherium munozi, Plesiotypotherium casirense, and Pseudotypotherium sp, and the late Oligocene trachytheriine Trachytherus alloxus. Functional properties are consistent with a digging ability and a “scratch-digger” lifestyle for Mesotheriidae. In general, there are only slight differences among the comparison sample, except for Mesotherium cristatum, which reflect significant osteological modifications, likely to help increasing the moment arm while scratch-digging. These features are mainly observable on scapulae (distal border caudally displaced) and humeri (deltoid crest distally oriented and crista supracondylaris lateralis laterally projected).     

Ants of the Genus <Emphasis Type="Italic">Fallomyrma</Emphasis> Dlussky et Radchenko (Hymenoptera,Formicidae, Myrmicinae) from Late Eocene European Ambers

The extinct monotypic ant genus Fallomyrma was described by Dlussky and Radchenko in 2006 based on workers from Late Eocene Rovno (Ukraine), Scandinavian (Denmark), and Bitterfeld (Germany) ambers. Three new Fallomyrma species from the Rovno amber are here described based on workers: F. anodonta sp. nov., F. marginata sp. nov., and F. robusta sp. nov. A key to all known species of this genus is compiled. The quantity ratios (of the numbers of species and specimens) of Fallomyrma and other amber Myrmicinae genera are considered. The opinion of the autochthonous origin of the Rovno amber is confirmed.