产纤维素体菌厌氧降解纤维素制乙醇的研究进展

纤维素(植物细胞壁的主要成分)是自然界最丰富的一种可再生资源,但是极难降解利用。纤维素体是一种多酶复合体,能够高效降解纤维素,降解产物能够被某些厌氧微生物利用发酵产乙醇。综述了近年来产纤维素体菌厌氧降解纤维素制乙醇的研究进展,报道了纤维素体结构和功能、重组设计型纤维素体、代谢工程、混菌培养等研究方向的最新成果和思路,并对其前景作了展望。可以预期,随着研究的深入,生物质制乙醇必将日益显示出其强大的市场竞争力。     

纤维素降解菌的筛选与复合菌系的初步构建

目的针对大庆地区土地盐碱化较严重,盐碱面积较大等现状,从大庆特征性盐碱地区土壤样品中分离出能够降解纤维素的菌株,为降解植物废料以及缓解土壤盐碱化改善土壤环境提供功能菌株。方法通过刚果红染色法初步筛得到具有纤维素降解能力菌株,进一步用比色法测定其纤维素降解率,同时测定菌株耐盐、耐碱、产酸性能,选择性能优良的3株菌作为纤维素降解菌复合菌系构建菌株,通过耐盐性、耐碱性和纤维素降解率实验测定复合菌系菌株最佳组合,进一步通过上述实验确定复合菌系菌株最佳混合比例。结果得到由DX-5和DX-9按照2∶3进行组合复合菌系纤维素降解率最高,达到87.96%,且具有较高的耐盐以及耐碱能力。结论通过实验得到纤维素降解菌的复合菌系,具有较高纤维素降解率以及改善土壤盐碱性能力。     

甲基纤维素对生黄瘤胃球菌降解纤维素的抑制效应

高度甲基化的长链纤维素强有力地抑制瘤胃器官的几种纤维素分解菌的纤维素降解作用。确切地说,甲基纤维素对生黄瘤胃球菌FDI生长的抑制效应是由浓度决定的,如0.1％(W/V)时具完全抑制作用;它不抑制菌体在纤维素或纤维寡糖上的生长,甲基化纤维寡糖混合物平均聚合度为6.7—9.5才抑制纤维素降解,平均聚合度为1.0—4.5时则不抑制纤维素的降解。用对硝基酚—β—D—纤维二糖类物质的水解作用测纤维酶活性时,观察到甲     

瘤胃微生物对纤维素降解机理

城市有机垃圾中木质纤维素难以被降解的根本原因 ,在于其木质素的物理屏障作用及纤维素本身的结晶结构 ,瘤胃微生物能够高效降解木质纤维素 ,是因为瘤胃菌群中存在各种可以分别降解木素和结晶纤维素微生物 ,它们分泌的各种酶类是降解的关键所在。     

Cumulative cellulolytic enzyme activities and initial litter quality in prediction of cellulose degradation in an alpine meadow of the eastern Tibetan Plateau

植物凋落物分解是决定陆地生态系统碳和养分循环的关键生态系统过程。作为凋落物的主要组成部分,纤维素是与凋落物分解相关的微生物的重要能量来源。纤维素酶在凋落物纤维素降解过程中的重要作用已为人们所熟知,然而纤维素降解的季节模式、累积酶活性和凋落物质量是否能预测高寒草甸的纤维素降解仍是一个未解之谜,这限制了我们对草本植物凋落物纤维素降解的认识。 为了探究纤维素降解的季节性模式以及累积纤维素分解酶活性和凋落叶初始质量对纤维素降解的影响,我们在青藏高原东部的高山草甸选取了三种优势种[圆叶筋骨草(Ajuga ovalifolia)、藏羊茅(Festuca wallichanica)和草甸马先蒿(Pedicularis roylei)],进行了为期两年的凋落物网袋分解实验。 我们的研究发现,纤维素在第一年中迅速降解且降解率超过50%,而且主要发生在第一个生长季(31.9%–43.3%)在两年的分解过程中,纤维素降解由累积内切葡聚糖酶(R²= 0.70),累积纤维二糖水解酶(R²= 0.59)和累积1,4-β-葡糖苷酶(R²=       0.57)共同驱动。此外,在这两年的分解过程中,纤维素、可溶性有机碳、总酚、木质素的浓度和木质素/N可以解释纤 维素降解变异的52%–78%)。用初始纤维素浓度模型预测纤维素降解效果最佳(R² = 0.78)。在凋落物的分解过程中,酶效率和微生物对纤维素分解酶的分配因物种而异。藏羊茅凋落物中纤维素酶效率较高,但质量相对较低。与草甸马先蒿相比,完全降解圆叶筋骨草和藏羊茅的纤维素需要4倍和6.7倍的内切葡聚糖酶、3倍和4.5倍的纤维二糖水解酶、1.2倍和1.4倍的1,4-β-葡糖苷酶。我们的研究结果表明,虽然微生物酶活性和凋落物初始质量都对高山草甸纤维素降解有显著影响,但使用纤维素浓度来预测纤维素降解是简化凋落物分解过程中纤维素降解和C循环模型的好方法。     

瘤胃纤维素降解菌的分离鉴定及其纤维素降解特性

纤维素是地球上最丰富的可再生有机资源,但是其不溶于水和有机溶剂的难降解特性限制了它的利用.多年来,研究者们在利用纤维素资源方面做着努力,其中,利用微生物产生的纤维素酶降解纤维素,具有条件温和、产物产率高和无二次污染等特点,成为目前较有效且更接近自然的一种纤维素处理方法.同时,由微生物产生的纤维素酶在食品、酿酒、造纸、饲料和纺织等行业也有着广泛的应用.     

大熊猫肠道正常菌群降解纤维素的机制

大熊猫的主食竹类粗纤维含量很高,而大熊猫自身的消化系统不能降解纤维素。现已从大熊猫的肠道正常菌群中鉴定出涵盖7个菌门的22种菌,相关的研究证明大熊猫的肠道正常菌群能降解纤维素。大熊猫肠道中的假单胞菌产生的漆酶能对竹纤维中的木质素进行氧化,使纤维素得以暴露,梭菌属、淀粉芽胞杆菌等产生的纤维素酶将其降解成大熊猫可利用的糖类。其具体机制有待进一步研究。     

六种白腐菌预处理对毛白杨木材酶水解效果的影响

通过化学分析和酶水解试验,研究了不同的白腐菌对毛白杨的预处理效果及不同组分的降解对酶水解的影响。毛白杨木片经6种白腐菌预处理30d后,各组分都发生了降解,其中半纤维素的损失最为显著,Trametes ochracea C6888引起半纤维素降解率高达47.19%,其次是纤维素和酸不溶木素的降解。在后续酶水解过程中,6种白腐菌处理后的样品显示出不同的水解模式,菌株Trametes ochracea C6888、T. pubescens C7571和T. versicolor C6915预处理效果最为显著,还原糖得率在整个酶水解过程中一直高于对照,其中T. ochracea C6888在水解96h后还原糖得率达到15.93%,比未处理样品提高了25%。分析酸不溶木素降解率及半纤维素降解率与还原糖得率的关系发现,不同菌株在作用同一种基质时,预处理效果差异显著,木质素和半纤维素的脱除都会影响木质纤维素的酶水解。     

青霉生产木质纤维素降解酶系的研究进展

木质纤维素降解酶系的高效生产是实现植物生物质大规模生物炼制的重要支撑。就地生产木质纤维素降解酶,有助于降低其使用成本,提高技术经济效益。青霉是自然界常见的木质纤维素降解真菌,可以合成分泌种类多样、组分齐全的木质纤维素降解酶系,已被应用于纤维素酶制剂的工业生产。文中从就地生产降解酶,为木质纤维素生物炼制构建“糖平台”的角度,综述了青霉木质纤维素降解酶系的性质、菌株遗传改造及发酵工艺的研究进展。     

生孢噬纤维细菌的滤纸纤维素的降解过程研究

生孢噬纤维细菌(Sporocytophaga)是能够降解纤维素的滑动细菌,它可将滤纸和棉花纤维素完全降解;但其可测得的纤维素酶活性极低。为研究其纤维素降解机制,本文采用扫描电子显微镜观察了一株生孢噬纤维细菌(Sporocytophaga sp.) JL01对滤纸纤维素的降解过程,分析了在此过程中滤纸纤维素的降解与菌体形态变化之间的关系。结果表明：生孢噬纤维细菌在纤维素降解过程中,形成长度为2.5μm～4.0μm可弯曲的细长杆状细胞,该细长杆状细胞通过与纤维素分子的吸附或嵌入纤维素中完成对纤维素的降解;在降解后期,杆状细胞转化为直径约为0.6μm的小孢囊休眠细胞。     

Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii

The complete DNA sequence of the aerobic cellulolytic soil bacterium Cytophaga hutchinsonii, which belongs to the phylum Bacteroidetes, is presented. The genome consists of a single, circular, 4.43-Mb chromosome containing 3,790 open reading frames, 1,986 of which have been assigned a tentative function. Two of the most striking characteristics of C. hutchinsonii are its rapid gliding motility over surfaces and its contact-dependent digestion of crystalline cellulose. The mechanism of C. hutchinsonii motility is not known, but its genome contains homologs for each of the gld genes that are required for gliding of the distantly related bacteroidete Flavobacterium johnsoniae. Cytophaga-Flavobacterium gliding appears to be novel and does not involve well-studied motility organelles such as flagella or type IV pili. Many genes thought to encode proteins involved in cellulose utilization were identified. These include candidate endo-beta-1,4-glucanases and beta-glucosidases. Surprisingly, obvious homologs of known cellobiohydrolases were not detected. Since such enzymes are needed for efficient cellulose digestion by well-studied cellulolytic bacteria, C. hutchinsonii either has novel cellobiohydrolases or has an unusual method of cellulose utilization. Genes encoding proteins with cohesin domains, which are characteristic of cellulosomes, were absent, but many proteins predicted to be involved in polysaccharide utilization had putative D5 domains, which are thought to be involved in anchoring proteins to the cell surface.     

哈氏噬纤维菌吸附纤维素的影响因素

[目的]探索哈氏噬纤维菌(Cytophaga hutchinsonii)吸附纤维素的作用机制.[方法]通过比较不同因素对哈氏噬纤维菌吸附纤维素的影响,包括:菌龄、pH、温度、表面电荷、细胞活力、细胞表面蛋白、细胞表面多糖以及纤维素类似物等,寻找在吸附过程中起重要作用的细胞成分.[结果]菌体经蛋白酶及热处理,对纤维素的吸附能力完全丧失;叠氮化钠、甲醛和戊二醛处理对菌体吸附能力影响不明显;菌体经刚果红和高碘酸钠处理,吸附能力变化不大;菌体对纤维素底物的吸附具有特异性,吸附作用不受纤维二糖和羧甲基纤维素的抑制.[结论]实验表明,哈氏噬纤维菌吸附纤维素的能力与菌体表面蛋白密切相关,而受细胞的代谢活性和胞外多糖影响较小,推测细胞表面可能存在特异性的纤维素结合蛋白.     

Identification of a cell-surface protein involved in glucose assimilation and disruption of the crystalline region of cellulose by Cytophaga hutchinsonii

Journal of Industrial Microbiology & Biotechnology - The crystalline region of cellulose is the main barrier to the utilization of crystalline cellulose. Cytophaga hutchinsonii actively digests...     

Mesophilic aerobic Gram negative cellulose degrading bacteria from aquatic habitats and soils

New procedures have been developed for the isolation and purification of aerobic and facultatively anaerobic bacteria able to utilize cellulose as sole source of carbon and energy. Wood pulp medium was used for enrichment, and bacterial cellulose, obtained from cultures of Acetobacter aceti subsp. xylinus , was employed as carbon substrate during purification and for the rapid screening of colonies for cellulolytic activity. The methods have revealed several new groups of Gram negative cellulose-degrading bacteria, including organisms that form differentiated colonies superficially similar to myxobacterial sori. The organisms formed several phenetic clusters, three of which contained reference strains of Cellvibrio fulvus, Pseudomonas fluorescens var. cellulosa and Cytophaga hutchinsonii . No cellulose degrading cluster included non-cellulose degrading strains. Most of the cellulose degraders studied were flagellated and, of these, the majority had polar or lophotrichous flagella, although one cluster included peritrichously flagellated organisms. The cellulose degraders in this study included five organisms that grew on nitrate-free medium; these appeared in two different clusters. A few Gram positive isolates appeared to belong to the genera Streptomyces and Thermoactinomyces .     

哈氏噬纤维菌生活史中形态的变化

【目的】研究哈氏噬纤维菌Cytophaga hutchinsonii 在生活史中细胞形态的变化。【方法】利用光学显微镜、荧光显微镜和电子扫描显微镜对哈氏噬纤维菌生活状态进行详细观察。【结果】发现在饥饿状态下,长杆状菌体开始逐渐弯曲,菌体两端靠近成环形,环形菌体又进一步盘绕收缩成微小球形体,微小球形体在一定条件下能像生孢噬纤维菌的小孢囊一样萌发形成长杆状菌。另外还观察到哈氏噬纤维菌特殊的类核分裂现象。【结论】首次对哈氏噬纤维形成环形菌体和类似小孢囊的微小球形体的过程进行详细描述,为进一步揭示其形态变化与纤维素降解能力之间的关系提供依据。     

A new locus affects cell motility, cellulose binding, and degradation by Cytophaga hutchinsonii

Cytophaga hutchinsonii is a Gram-negative gliding bacterium, which can rapidly degrade crystalline cellulose via a novel strategy without any recognizable processive cellulases. Its mechanism of cellulose binding and degradation is still a mystery. In this study, the mutagenesis of C. hutchinsonii with the mariner-based transposon HimarEm3 and gene complementation with the oriC-based plasmid carrying the antibiotic resistance gene cfxA or tetQ were reported for the first time to provide valuable tools for mutagenesis and genetic manipulation of the bacterium. Mutant A-4 with a transposon mutation in gene CHU_0134, which encodes a putative thiol-disulfide isomerase exhibits defects in cell motility and cellulose degradation. The cellulose binding ability of A-4 was only half of that of the wild-type strain, while the endo-cellulase activity of the cell-free supernatants and on the intact cell surface of A-4 decreased by 40?%. Sodium dodecyl sulfate polyacrylamide gel electrophoresis of proteins binding to cellulose in the outer membrane showed that most of them were significantly decreased or disappeared in A-4 including some Gld proteins and hypothetical proteins, indicating that these proteins might play an important role in cell motility and cellulose binding and degradation by the bacterium.     

Crystallographic aspects of sub-elementary cellulose fibrils occurring in the wall of rose cells culturedin vitro

Summary Quantities of disencrusted sub-elementary cellulose fibrils from the cell wall of rose cells culturedin vitro were prepared. Following an X-ray and electron diffraction analysis, these fibrils gave a cellulose diffraction pattern which presented only two strong equatorial diffraction spacings at 0.409 and 0.572 nm indicating that the fibrils have a crystalline structure resembling that of cellulose IV_I. This observation is best explained in terms of a lateral disorganization of the cellulose chains within the fibrils. This disorganization cannot be eliminated and is connected with the small width of the fibrils which contain from 12 to 25 cellulose chains only. In these fibrils, most of the cellulose chains are superficial and not locked with neighboring chains in a tight hydrogen bond system as in thicker cellulose microfibrils.     

A mutant β-glucosidase increases the rate of the cellulose enzymatic hydrolysis

The enzymatic hydrolysis of cellulose and lignocellulosic materials is marked by a rate decrease along the reaction time. Cellobiohydrolase slow dissociation from the substrate and its inhibition by the cellobiose produced are relevant factors associated to the rate decrease. In that sense, addition of β-glucosidases to the enzyme cocktails employed in cellulose enzymatic hydrolysis not only produces glucose as final product but also reduces the cellobiohydrolase inhibition by cellobiose. The digestive β-glucosidase GH1 from the fall armyworm Spodoptera frugiperda, hereafter called Sfβgly, containing the mutation L428V showed an increased k_cat for cellobiose hydrolysis. In comparison to assays conducted with the wild-type Sfβgly and cellobiohydrolase TrCel7A, the presence of the mutant L428V increased in 5 fold the initial rate of crystalline cellulose hydrolysis and reduced to one quarter the time needed to TrCel7A produce the maximum glucose yield. As our results show that mutant L428V complement the action of TrCel7A, the introduction of the equivalent replacement in β-glucosidases is a promising strategy to reduce costs in the enzymatic hydrolysis of lignocellulosic materials.     

Recent progress in cellulose biosynthesis

Cellulose comprises the major polymer of the plant cell wall. It consists of a set of parallel chains composed of glucans and these chains are highly oriented to form a structure known as a microfibril. The orientation of the microfibrils controls the extension of the direction of the plant cell. Extensive studies on the cellulose biosynthesis have been carried out for over three decades, and recently (1996) genes for cellulose biosynthesis in plants (CesA) were isolated. In the year 2002, a specific primer for cellulose biosynthesis reaction has been discovered and cellulose synthetic activity has been also confirmed by recombinant protein derived from the plant CesA gene. Furthermore, other proteins involved in cellulose biosynthesis besides CesA proteins were also proposed at the same time. One of these proteins, Korrigan cellulase, was suggested to act by removing sitosterol from the primer for biosynthesis reaction of cellulose. A membrane-bound sucrose synthase was also suggested to provide UDP-glucose as a substrate for cellulose biosynthesis. On the basis of these results, a new pathway for cellulose biosynthesis was proposed. Now, the research field of cellulose biosynthesis is facing a major turning point. Electronic Publication     

The mechanism of formation of Cellulose-like microfibrils in a cell-free system from Acetobacter xylinum

The mechanism of formation of cellulose-like microfibrils by a non-soluble, particulate enzyme and uridine diphosphoglucose (UDPG) in a cell-free system from Acetobacter xylinum was studied by transmission electron microscopy and X-ray diffraction. The suspension of particles to which the enzyme is adsorbed is composed of whole, dense ovoids, 50–250 nm long when wet, of fragments of the ovoids, and amorphous substance. There is a typical unit membrane around each ovoid but initially there is no trace of fibrillar material in the suspension. When the suspension of particles is incubated with UDPG, linear wisps of fibrils are produced which associate rapidly to form longer and wider threads, especially in 0.01 M NaCl. There is no visible attachment of the wisps to the particles. After 20 min incubation, threads with the typical morphology of cellulose microfibrils are formed that later tend to become entangled in clumps. The microfibrils are insoluble in hot, aqueous, alkaline solutions and resistant to the action of trypsin, but may be degraded by glusulase. After treatment with 1 M NaOH at 100° C or with cold 18% NaOH they show an X-ray diffraction pattern which resembles that of Cellulose II from mercerized, authentic bacterial cellulose. Incorporation of radioactive glucose into the insoluble residue is enhanced by drying of the cellulose microfibrils before alkaline digestion and especially by the addition of a gross excess of carrier cellulose after incubation. In this system there is no evidence for participation of linear, axial, synthesizing sites on the cell wall of the bacterium or for ordered, organized granules in the assembly of the microfibrils. That is, cellulose-like microfibrils may be formed in a cell-free system without the action of any of the previously suggested cell organelles. In addition, these observations are consistent with a previously described notion of a transient, hydrated, nascent, bacterial cellulose microfibril. The possibility that cellulose microfibrils of green plants may be formed in the same way is considered.N.R.C.C. 18314