麦积山肉鞭毛虫的物种多样性

用活体观察法对迄今缺乏了解的麦积山肉鞭类原生动物的物种多样性进行了调查,共鉴定出水生肉鞭虫100种,包括2个未知种。鞭毛亚门（Mastigophora）有2纲9目15科31属59种。植鞭纲（Phytomastigophorea）有52种,其中眼虫目(Euglenida) 36种,占鞭毛虫物种总数的61.02%,为优势类群;动鞭纲（Zoomastigophorea）仅有7种,没有明显的优势类群。肉足亚门（Sarcodina）有4纲6目19科32属41种。叶足纲（Lobosea）有31种,其中变形目（Amoebida）16种,占肉足虫物种总数的39.02%,为优势类群;表壳目（Arcellinida）12种,占29.27%,为次优势类群。在麦积山风景名胜区的南坡（为嘉陵江水系）分布有71种,北坡（为渭河水系）分布有56种,分水岭分布有13种,水生肉鞭毛虫的群落组成也显著不同;与国内典型的长江水系、雅鲁藏布江水系和黄河水系相比,麦积山分布的水生肉鞭毛虫群落组成均存在显著性差异。结果表明,麦积山水生肉鞭毛虫物种十分丰富,特有和稀有物种繁多,具有鲜明的独特性。     

关于物种濒危等级标准之探讨--对IUCN物种濒危等级的思考

为了保存地球上的生物多样性,我们需要根据物种的种群数量与分布、种群数量波动与分布区下降速率来评定濒危物种的濒危等级,并针对物种的濒危等级提出具体的保护措施。1994年11月,IUCN第40次理事会会议正式通过了经过修订的Mace-Lande物种濒危等级标准作为IUCN物种濒危等级标准。IUCN濒危物种红色名录虽然不是国际法和国家法律,但是对于政府间组织、非政府组织的保护决策以及各国的自然法律法规的制定有着深远的影响,在保护生物学理论研究中也发挥了一定作用。我们在研究制定中国水生野生生物濒危等级标准时发现,如果直接应用IUCN物种濒危等级标准评定水生野生生物濒危等级将存在一些问题。如：(1)如何区别对待那些本来就数量稀少、分布区狭窄的物种和那些由于人类活动而导致其种群数量与生境面积急剧下降的物种?(2)不同的动物类群能否应用同一濒危标准尺度?(3)如何区别对待物种边缘分布区和核心分布区的种群数量与密度的差异?(4)如何处理种群的局部灭绝、局部濒危?(5)一些濒危物种在野生环境中濒危,但是这些物种可以人工繁殖,如何处理可以人工繁殖的濒危物种?(6)如果没有种群与栖息地的精确历史资料和统计数据,怎样应用物种的濒危标准评估其濒危等级?在实践中,我们针对这些问题提出了解决方案。考虑与国际流行的IUCN物种濒危等级标准接轨,我们提出来一个由“无危”、“值得关注”、“受胁”、“濒危”和“灭绝”等5个级构成的濒危等级系统,其中“值得关注”、“受胁”、“濒危”又分为“一般”与“高度”两个亚等级。我们提出应区分“生态濒危物种”、“进化濒危物种”;对于不同生物类群,应区分物种的生活史对策,制定不同生活史物种的濒危标准。对于r-对策物种,引入“经济灭绝”这一等级,将这一等级对应于“受胁”等级,以解决缺少物种数量的统计数据和历史数据这一难题;区别对待特有物种,将其濒危等级提升一等;引进集合种群(metapopulation)概念,将集合种群的局域种群(local population)作为“个体”对待。     

厦门植物园多肉植物资源及应用评价

本文概述厦门植物园多肉植物资源的种类和类型,描述其栽培特性,评价多肉植物的园林应用及经济价值的开发状况,为进一步开发利用提供依据。     

濒危物种绒毛皂荚组织培养快繁技术的初步研究

以绒毛皂荚(Gleditsia vestita Chun et How ex B.G.Li)种子为外植体,通过愈伤组织诱导、不定芽分化增殖、生根和驯化移栽,建立了绒毛皂荚组织培养的快速繁殖体系。结果表明:1)绒毛皂荚子叶和胚轴在MS+6-BA3.0 mg/L+KT 0.4 mg/L+IAA 0.3 mg/L培养基上同步诱导出愈伤和芽,愈伤组织诱导率达到90.5%,同步分化率高达77.9%;2)不定芽增殖的最佳培养基为1/2MS+6-BA 1.0 mg/L+IBA 0.3 mg/L+NAA 0.2 mg/L,培养20 d后,增殖倍数为4.0;3)MS+NAA 0.5 mg/L+IAA 0.25 mg/L条件下,生根率高达100%,且移栽后植株长势好,成活率达90%以上。     

甘南亚高寒草甸稀有种对物种多样性和物种多度分布格局的贡献

稀有种不仅影响群落的物种多度分布格局, 同时也是α多样性的重要贡献者。本研究主要通过加性分配和Fortran软件的RAD程序包拟合的方法, 研究了甘南亚高寒草甸不同坡向物种多样性及多度分布格局的变化, 分析了物种多度分布格局及其α多样性的变化特征, 确定了稀有种在物种多度分布格局中的相对贡献。结果表明: (1)在南坡到北坡的变化中, 环境因子差异比较明显, 其中, 土壤全磷、有机碳、速效磷、碳氮比及含水量呈递增趋势; 土壤氮磷比和pH值呈递减趋势; 土壤全氮在西坡显著低于其他坡向, 而速效氮在所有坡向上差异不显著。(2)稀有种对群落物种多样性的影响在南-北坡向梯度上依次增大, 去除稀有种的影响在各坡向均高于去除非稀有种, 可见, 稀有种在甘南亚高寒草甸物种多样性中的相对贡献高于非稀有种。(3)各坡向的稀有种资源获取模式以随机分配占领模式(random fraction模型)为主, 而非稀有种则以生态位优先占领模式(geometric series模型)为主。由于稀有种有较大的扩散率, 在物种多样性较高的生态系统中, 物种之间的生态位重叠会更加明显, 从而抑制物种多样性的增加, 因此能达到维持原有物种多样性的目的。     

基于主成分分析的多肉植物营养液配方筛选

目的：研究不同营养液配方对姬胧月、黄丽两种多肉植物生长量、叶绿素含量、水肥利用效率的影响,筛选适宜的营养液配方。方法：选用改良Hoagland配方（A）、日本山崎配方（B）、低氮配方（C）、斯泰纳配方（D）4种营养液进行水培实验,处理2个月后测定两种多肉植物生长量、叶绿素含量、水分及营养元素利用效率,并进行方差分析和主成分分析。结果：营养液配方对两种多肉植物根数、根体积及根长有显著影响,配方B中新根数最多、根体积最大、根长最短,配方C新根数及根体积最小、根长最长。营养液配方对黄丽叶绿素含量有显著影响,配方A中叶绿素a、叶绿素b及总叶绿素含量均最高,姬胧月叶绿素含量在不同营养配方中无显著变化。营养液配方对两种多肉植物水分及营养元素利用率影响显著,B配方和A配方处理下N、P、K及水分利用效率较高,配方D和配方C较低。根据主成分分析综合评价,两种植物4种营养液得分由高到低是B>A>D>C。结论：B配方在生长表现及营养元素利用效率方面均最优,适合作为景天科姬胧月和黄丽水培的最佳营养液配方。     

基于能值的陆域受威胁和濒危物种价值估算——以福建省厦门市为例

开展受威胁和濒危物种价值评估是生物多样性研究的关键问题之一。当前受威胁和濒危物种研究正处于濒危等级界定和保护优先性确定阶段,存在不同保护等级交叉管理、价值评估方法欠缺及重复性计算等多方面问题。利用IUCN濒危等级和中国特有种等级名录确定厦门市不同濒危等级物种数,在此基础上利用能值转换率和修正的中国能值/货币比率对厦门市陆域受威胁和濒危物种价值进行估算。结果显示,通过多途径整理纳入估算的厦门市陆域野生动植物物种数为1444种,其中受威胁和濒危物种数为318种;2015年厦门市物种能值价值约为3.53×10~(11)元,2010年约为3.08×10~(11)元,其中两期受威胁和濒危物种能值价值均占物种总价值的88.31%;中国特有种等级对价值贡献最大达73.25%,其次是IUCN濒危等级达23.24%。研究表明,能值评估法能够客观凸显受威胁和濒危物种价值,研究结果可为生物多样性及物种保育的管理决策提供技术支撑。     

多物种集合的种-多度关系模型研究进展

种 -多度关系是群落结构研究最基本的方面之一。Preston最早描述的物种“常见性和罕见性的分布”是群落中种 -多度关系的一般特性。自从 Motomura开创性地提出一个几何序列模型用于描述这种特性后 ,生态学家已建立了许多拟合种 -多度关系的经验模型和理论模型 ,主要包括对数序列分布、对数正态分布等统计模型 ,几何序列模型、分割线段模型等生态位模型以及反映群落动态和环境制约作用的动态模型 ,还有其中一些模型的扩展模型。近年来 ,种 -多度关系研究领域已大大拓宽 ,如“群落”的内涵已延伸为“多物种集合”,物种“多度”的测度推广到“广义多度”。尽管种 -多度关系研究已取得很大进展 ,仍有一些问题尚待解决 ,诸如多度指标选择、种 -多度分布时空变化规律及其机制以及种 -多度关系模型的选择、检验、解释与应用。     

两种珍稀植物群落物种多度分布的核方法研究

首次提出物种多度分布的非参数核密度估计方法,介绍了此方法的构造和主要性质。珍稀濒危植物观光木群落和长苞铁杉群落的乔木层、灌木层、所有木本植物物种多度分布实例拟合结果表明,核方法能很好地描述群落物种多度分布。非参数核估计方法是群落物种多度分布模拟的一种有效方法,它丰富了物种多度分布拟合方法,为珍稀濒危植物的管理与保护提供了理论参考。     

基于多源遥感数据的植物物种分类与识别: 研究进展与展望

物种分类与识别是生物多样性监测的基础, 明确物种的类别及其分布是解决几乎所有生态学问题的前提。为深入了解基于多源遥感数据的植物物种分类与识别相关研究的发展现状和存在的问题, 本文对2000年以来该领域的研究进行了总结分析, 发现: 当前大多数研究集中在欧洲和北美地区的温带或北方森林以及南非的热带稀树草原; 使用最多的遥感数据是机载高光谱数据, 而激光雷达作为补充数据, 通过单木分割及提供单木的三维垂直结构信息, 显著提高了分类精度; 支持向量机和随机森林作为应用最广的非参数分类算法, 平均分类精度达80%; 随着计算机技术及机器学习领域的不断成熟, 人工神经网络在物种识别领域得以迅速发展。基于此, 本文对目前基于遥感数据的植物物种分类与识别中在分类对象复杂性、多源遥感数据整合、植物物候与纹理特征整合和分类算法技术等方面面临的挑战进行了总结, 并建议通过整合多时相监测数据、高光谱和激光雷达数据、短波红外等特定波谱信息、采用深度学习等方法来提高分类精度。     

列入《濒危野生动植物物种国际贸易公约》附录的物种的新标准

ＣＩＴＥＳ（濒危野生动植物国际贸易公约）是一个通过控制贸易的方法来维护物种生存及其持续利用的国际法规,其附录中所列的物种是重点管理的对象,主要根据现有的Ｂｅｒｎｅ标准来确定。但是,长期的实践证明,它已不能满足实际的需要。１９９２年６月ＣＩＴＥＳ常务委员会要求世界保护联盟协助制定一个简明、实用、科学和客观的新标准,本文对此作一简介和讨论。     

A comparison in species distribution model performance of succulents using key species and subsets of environmental predictors

Identifying the environmental drivers of the global distribution of succulent plants using the Crassulacean acid metabolism pathway of photosynthesis has previously been investigated through ensemble‐modeling of species delimiting the realized niche of the natural succulent biome. An alternative approach, which may provide further insight into the fundamental niche of succulent plants in the absence of dispersal limitation, is to model the distribution of selected species that are globally widespread and have become naturalized far beyond their native habitats. This could be of interest, for example, in defining areas that may be suitable for cultivation of alternative crops resilient to future climate change. We therefore explored the performance of climate‐only species distribution models (SDMs) in predicting the drivers and distribution of two widespread CAM plants, Opuntia ficus‐indica and Euphorbia tirucalli. Using two different algorithms and five predictor sets, we created distribution models for these exemplar species and produced an updated map of global inter‐annual rainfall predictability. No single predictor set produced markedly more accurate models, with the basic bioclim‐only predictor set marginally out‐performing combinations with additional predictors. Minimum temperature of the coldest month was the single most important variable in determining spatial distribution, but additional predictors such as precipitation and inter‐annual precipitation variability were also important in explaining the differences in spatial predictions between SDMs. When compared against previous projections, an a posteriori approach correctly does not predict distributions in areas of ecophysiological tolerance yet known absence (e.g., due to biotic competition). An updated map of inter‐annual rainfall predictability has successfully identified regions known to be depauperate in succulent plants. High model performance metrics suggest that the majority of potentially suitable regions for these species are predicted by these models with a limited number of climate predictors, and there is no benefit in expanding model complexity and increasing the potential for overfitting.     

Community context and the influence of non-indigenous species on juvenile salmon survival in a Columbia River reservoir

Non-indigenous species (NIS) have been called biological pollutants, which implies that reducing their numbers should reduce negative impacts. To test this hypothesis, we used food web models, parameterized with data from field studies, to ask how reducing the number of NIS co-occurring with endangered salmon would affect salmon mortality. Our analyses indicate that predation on Upper Columbia River spring chinook salmon Oncorhynchus tshawytscha and steelhead O. mykiss juveniles was affected very little by NIS reduction. The effects of removing NIS were partly or totally offset by indirect food web interactions, and were subtle compared to effects of native predator management. We predict that the most effective way of reducing predation on salmon smolts will involve managing native predators and targeted removals of specific NIS. Minimizing impact of established NIS thus entails not only reducing NIS prevalence, but also considering background management practices and community context.     

Effects of microbivore species composition and basal resource enrichment on trophic-level biomasses in an experimental microbial-based soil food web

Previous theoretical and empirical evidence suggests that species composition within trophic levels may profoundly affect the response of trophic-level biomasses to enhanced basal resources. To test whether species composition of microbivorous nematodes has such an effect in microbial-based soil food webs, I created three microcosm food webs, consisting of bacteria, fungi, bacterial-feeding nematodes (Acrobeloides tricornus, Caenorhabditis elegans), fungal-feeding nematodes (Aphelenchus avenae, Aphelenchoides sp.) and a predatory nematode (Prionchulus punctatus). The food webs differed in species composition at the second trophic level: food web A included A. tricornus and Aph. avenae, food web B included C. elegans and Aphelenchoides sp., and food web AB included all four species. I increased basal resources by adding glucose to half of the replicates of each food web, and sampled microcosms destructively four times during a 22-week experiment to estimate the biomass of organisms at each trophic level. Microbivore species composition significantly affected bacterivore and fungivore biomass but not bacterial, fungal or predator biomass. Greatest bacterivore and fungivore biomass was found in food web A, intermediate biomass in food web AB, and smallest biomass in food web B. Basal resource addition increased the biomass of microbes and microbivores but did not affect predator biomass. Importantly, microbivore species composition did not significantly modify the effect of additional resources on trophic-level biomasses. The presence of a competitor reduced the biomass of A. tricornus and Aph. avenae, in that the biomass of these species was less in food web AB than in food web A, whereas the biomass of C. elegans and Aphelenchoides sp. was not affected by their potential competitors. The biomass of Aph. avenae increased with additional resources in the absence of the competitor only, while the biomass of A. tricornus and Aphelenchoides sp. increased also in the presence of their competitors. The results imply that microbivore species composition may determine the second-level biomass in simple microbe-nematode food webs, but may not significantly affect biomass at other levels or modify the response of trophic-level biomasses to enhanced basal resources. The study also shows that even if the role of predation in a food web is diminished, the positive response of organisms to increased resource availability may still be hindered by competition. Received: 22 June 1998 / Accepted: 28 August 1998     

基于SURF指数识别海州湾食物网的关键饵料生物

关键种(keystone species)在生态系统中发挥着不可替代的重要作用,对于群落结构的稳定与演替起着决定性的作用。基于2011年3—12月在海州湾及其邻近海域进行的渔业资源底拖网调查资料以及胃含物分析数据和参考历史文献数据,以物种间的摄食关系作为基础,采用SURF(Supportive Role to Fishery ecosystems)指数识别海州湾食物网中的关键饵料生物。在矩阵中分析每个物种作为饵料生物为捕食者提供的摄食比例及捕食者数量,计算每个物种的关键指标(SURFi)的值,结果表明前五位数值较高的物种是细鳌虾(Leptochela gracilis)、毛虾(Acetessp.)、疣背宽额虾(Latreutes planirostris)、日本鼓虾(Alpheus japonicus)和鳀鱼(Engraulis japonicus),它们是海州湾的关键饵料生物,在整个食物网中起到关键的控制作用,它们的数量波动会对海州湾其他物种产生直接或间接的影响。加强关键饵料生物的保护,对于维持海州湾生态系统的健康和稳定至关重要。     

Detection of pest species with different ratios in tea plant based on electronic nose

It is highly possible that tea (Camellia sinensis) plant is attacked by more than one pest species at the same time, and the determination of their proportion is of great significance to the management of tea plants. However, there are no literatures focusing on it previously. In this work, two pest species (Ectropis obliqua and Ectropis grisescens) in six different ratios (10:0, 8:2, 6:4, 4:6, 2:8 and 0:10) were applied to attack tea plants and electronic nose (E‐nose) was employed to detect them, labelled as group 10:0, 8:2, 6:4, 4:6, 2:8 and 0:10, respectively. Two prediction methods were applied to predict the ratio of E. obliqua and E. grisescens attacking tea plant and their performances were compared. The first method employed regression algorithm for prediction analysis based on the whole E‐nose data directly. The second method classified tea plants into three main classes (the first class contained group 10:0, the second class contained groups 8:2, 6:4, 4:6 and 2:8, and the third class contained group 0:10) first, then regression algorithm was applied to deal with the second class for prediction analysis. The results showed that the second method had a better performance. Its discrimination results showed 100% of the correct classification rate for training set and 93.75% for testing set. Meanwhile, its prediction results showed 0.0005 of root mean square error (RMSE) for calibration set, 0.0064 for validation set and 99.07% of fitting correlation coefficients (R²) for calibration set, 91.22% for validation set, which were acceptable for prediction analysis and proved that E‐nose was a feasible technique for pests' ratio prediction.     

Decline of unionid mussels enhances hybridisation of native and introduced bitterling fish species through competition for breeding substrate

1. Bitterling fishes (Subfamily: Acheilognathinae) spawn in the gills of living freshwater mussels and obligately depend on the mussels for reproduction. On the Matsuyama Plain, Japan, populations of unionid mussels—Pronodularia japanensis, Nodularia douglasiae, and Sinanodonta lauta—have decreased rapidly over the past 30 years. Simultaneously, the population of a native bitterling fish, Tanakia lanceolata, which depends on the three unionids as a breeding substrate, has decreased. Furthermore, a congeneric bitterling, Tanakia limbata, has been artificially introduced, and hybridisation and genetic introgression occur between them. Here, we hypothesised that decline of the unionids has enhanced this invasive hybridisation through competition for the breeding substrate.
2. Three study sites were set in three streams on the Matsuyama Plain. We collected adult bitterling fishes (native T. lanceolata, introduced T. limbata, and foreign Rhodeus ocellatus ocellatus) once a week from April to October 2013 to measure their densities in streams and to examine seasonal differences in female ovipositor length, which elongates in the breeding season. Simultaneously, we set quadrats and captured unionids and measured environmental conditions. Each unionid individual was kept separately in its own aquarium to collect ejected bitterling eggs/larvae. Tanakia eggs and larvae were genotyped using six microsatellite markers and the mitochondrial cytochrome b gene.
3. Introduced T. limbata was more abundant, had a longer breeding period, and produced more juveniles than native T. lanceolata. Hybrids between the two species occurred at all sites, and in total 101 of the 837 juveniles genotyped were hybrids. The density of P. japanensis was low, at most 0.42 individuals/m². Nodularia douglasiae and S. lauta have nearly or totally disappeared from these sites. Hybrid clutches of Tanakia species occurred more frequently where the local density of P. japanensis was low. Mussels were apparently overused and used simultaneously by three species of bitterlings.
4. Decline of freshwater unionid populations has enhanced hybridisation of native and invasive bitterling fishes through increasing competition for breeding substrate. We showed that rapid decline of host mussel species and introduction of an invasive congener have interacted to cause a rapid decline of native bitterling fish.
5. Degradation of habitat and the introduction of invasive species interact to cause a cascade of extinctions in native species. In our study, obligate parasite species are threatened because the host species are disappearing, which means there is a serious threat of coextinction.

     

iLIR: A web resource for prediction of Atg8-family interacting proteins

Macroautophagy was initially considered to be a nonselective process for bulk breakdown of cytosolic material. However, recent evidence points toward a selective mode of autophagy mediated by the so-called selective autophagy receptors (SARs). SARs act by recognizing and sorting diverse cargo substrates (e.g., proteins, organelles, pathogens) to the autophagic machinery. Known SARs are characterized by a short linear sequence motif (LIR-, LRS-, or AIM-motif) responsible for the interaction between SARs and proteins of the Atg8 family. Interestingly, many LIR-containing proteins (LIRCPs) are also involved in autophagosome formation and maturation and a few of them in regulating signaling pathways. Despite recent research efforts to experimentally identify LIRCPs, only a few dozen of this class of—often unrelated—proteins have been characterized so far using tedious cell biological, biochemical, and crystallographic approaches. The availability of an ever-increasing number of complete eukaryotic genomes provides a grand challenge for characterizing novel LIRCPs throughout the eukaryotes. Along these lines, we developed iLIR, a freely available web resource, which provides in silico tools for assisting the identification of novel LIRCPs. Given an amino acid sequence as input, iLIR searches for instances of short sequences compliant with a refined sensitive regular expression pattern of the extended LIR motif (xLIR-motif) and retrieves characterized protein domains from the SMART database for the query. Additionally, iLIR scores xLIRs against a custom position-specific scoring matrix (PSSM) and identifies potentially disordered subsequences with protein interaction potential overlapping with detected xLIR-motifs. Here we demonstrate that proteins satisfying these criteria make good LIRCP candidates for further experimental verification. Domain architecture is displayed in an informative graphic, and detailed results are also available in tabular form. We anticipate that iLIR will assist with elucidating the full complement of LIRCPs in eukaryotes.     

江苏宝华山区药用维管植物资源组成分析

为全面了解江苏宝华山区药用维管植物资源现状,依据“第四次全国中药资源普查”项目的要求,采用线路调查和样方调查相结合的方法,对该区域药用维管植物的种类组成、科属构成、生活型、濒危现状和中药学特征以及重点药用维管植物的资源状况进行了调查和分析。结果显示：宝华山区共有药用维管植物164科620属1089种(含种下等级),分别占江苏省药用维管植物科、属、种数的88.2%、87.3%、81.0%,其中,蕨类植物25科33属50种、裸子植物7科13属16种、被子植物132科574属1023种;在科属构成上均以包含单种和寡种的小科、小属为主。从该区域药用维管植物的生活型看,以草本最为丰富,有734种;乔木和灌木(含木质藤本)较少,分别有125和230种。从所在的植被类型看,阔叶林数量最多,其后依次为针阔混交林、灌草丛、人工植被,针叶林数量最少。从地理分布看,与同区域种子植物的地理分布特征基本吻合,具有亚热带向温带过渡的特点。从珍稀濒危状况看,该区域现存中国特有属14属、国家级珍稀濒危药用维管植物18种、江苏省省级保护药用维管植物32种。从中药材上看,有道地药材17种和重点药用维管植物130种,但各种类的数量总体上较少。从该区域药用维管植物的中药学特征看,在药用部位上以全草(株)类、根和根茎类较多,分别占总种数的44.2%和24.0%;在药性上以平性最多,占30.9%;在药味上以苦味最多,占40.0%;有毒的药用植物占12.9%,其中小毒种类最多。综合分析结果显示：宝华山区药用维管植物种类丰富,其中,道地药材占有一定比例,但重点药用维管植物数量有限且分布频度总体较低。根据上述调查结果,对宝华山区药用维管植物资源的保护和利用提出了一些建议。