Mechanisms underpinning climatic impacts on natural populations: altered species interactions are more important than direct effects

Shifts in species' distribution and abundance in response to climate change have been well documented, but the underpinning processes are still poorly understood. We present the results of a systematic literature review and meta‐analysis investigating the frequency and importance of different mechanisms by which climate has impacted natural populations. Most studies were from temperate latitudes of North America and Europe; almost half investigated bird populations. We found significantly greater support for indirect, biotic mechanisms than direct, abiotic mechanisms as mediators of the impact of climate on populations. In addition, biotic effects tended to have greater support than abiotic factors in studies of species from higher trophic levels. For primary consumers, the impact of climate was equally mediated by biotic and abiotic mechanisms, whereas for higher level consumers the mechanisms were most frequently biotic, such as predation or food availability. Biotic mechanisms were more frequently supported in studies that reported a directional trend in climate than in studies with no such climatic change, although sample sizes for this comparison were small. We call for more mechanistic studies of climate change impacts on populations, particularly in tropical systems.     

Patch size effects are more important than genetic diversity for plant–herbivore interactions in Brassica crops

1. Considerable evidence suggests that the diversity within plant communities may strongly affect the strength of species interactions, but the majority of studies only considered interspecific diversity. 2. This paper examines the effect of intraspecific genetic diversity within Brassica fields on two Brassica specialists, cabbage root fly, and diamondback moth, and on a parasitoid attacking diamondback moths. Genetic diversity was manipulated both in a replacement and an additive design. 3. Both herbivore densities and parasitism rates were higher in smaller plots, with limited responses to increased within‐plot diversity. All species showed variable densities across genotypes, and preference hierarchies were species specific. 4. Responses to plot size in root flies scaled with the diameter‐to‐area ratio, suggesting that patch detectability affected local density, whereas responses by diamondback moths and parasitoids deviated from this ratio. These species differences could be traced to differences in the residence time within patches, where diamondback moths typically spend longer and more variable time periods in patches than root flies. 5. The lack of response to genetic diversity by both herbivores suggests that egg‐laying rates are affected by decisions on the plant and not by attraction from a distance, neither to the plant itself nor the patch. Patterns of differential attack may then be due to different acceptability for studied genotypes. 6. Future theories on insect responses to spatial heterogeneity should focus on species traits and how traits interact with information landscapes in the field.     

Untangling the relationships among regional occupancy,species traits,and niche characteristics in stream invertebrates

The regional occupancy and local abundance of species are affected by various species traits, but their relative effects are poorly understood. We studied the relationships between species traits and occupancy (i.e., proportion of sites occupied) or abundance (i.e., mean local abundance at occupied sites) of stream invertebrates using small‐grained data (i.e., local stream sites) across a large spatial extent (i.e., three drainage basins). We found a significant, yet rather weak, linear relationship between occupancy and abundance. However, occupancy was strongly related to niche position (NP), but it showed a weaker relationship with niche breadth (NB). Abundance was at best weakly related to these explanatory niche‐based variables. Biological traits, including feeding modes, habit traits, dispersal modes and body size classes, were generally less important in accounting for variation in occupancy and abundance. Our findings showed that the regional occupancy of stream invertebrate species is mostly related to niche characteristics, in particular, NP. However, the effects of NB on occupancy were affected by the measure itself. We conclude that niche characteristics determine the regional occupancy of species at relatively large spatial extents, suggesting that species distributions are determined by environmental variation among sites.     

Climate stability is more important than water–energy variables in shaping the elevational variation in species richness

Changes in climate variables have an important impact on the prediction and protection of elevational biodiversity. Gaps exist in our understanding of the elevational distribution patterns in seed plant species richness. Our study examines the importance of climate variables in shaping the elevational variation in species richness. The importance of boundary constraint was also taken into account. Model selection based on Akaike's information criterion was used to select the best explaining climate models. Variation partitioning was used to assess the independent and joint effects of water–energy, physiological tolerance, and environmental stability variables on species richness. Our results revealed that: (a) Both raw (boundary constraint unreduced) and estimated (boundary constraint reduced) species richness showed large elevational variation, with the peak species richness seen at midelevations. The environmental variables were better at explaining the distribution pattern of species richness along the elevation, when the effect of boundary constraint was reduced; (b) the physiological tolerance and environmental stability variables explained more variation in raw and estimated species richness compared with the water–energy variables. Estimated species richness was better explained (98.6%) by the environmental variables than raw species richness (94%); (c) the water‐related variables generally had the highest independent effect on raw and estimated species richness and were dominant in shaping the elevational variation in species richness. Our findings quantify the influence of boundary constraint on the distribution pattern of species along an altitudinal gradient and compare the relative contributions of environmental stability and water–energy in explaining the altitude gradient distribution pattern of plant seed species.     

Site factors are more important than management for indicator species in semi-natural grasslands in southern Sweden

Plant Ecology - Management of semi-natural grasslands is essential to retain the characteristic diversity of flora and fauna found in these habitats. To maintain, restore or recreate favourable...     

Functional and phylogenetic dimensions are more important than the taxonomic dimension for capturing variation in stream fish communities

Biodiversity is inherently multidimensional in nature, differences in evolutionary history, attributes of species, taxonomic composition constitutes a small fraction of whole variation present in this multidimensional space. Despite its multidimensional characteristic, biodiversity has been traditionally measured by assessing its dimensions separately through metrics of diversity. However, assessing multiple dimensions in a common framework opens the possibility of answering interesting questions that, until now, are poorly understood, such as: What dimensions capture most of the variation present in biodiversity among communities? We assess this question by extending the framework of Importance Values (IVs) to three dimensions of variation in biodiversity, functional, taxonomic and phylogenetic, and evaluate which of these captures the most variation in biodiversity space. To address this question we used data from stream fish communities of the Ivinhema River Basin in Brazil. We found that functional and phylogenetic dimensions are more important than the taxonomic dimension (represented by richness) in capturing variation in the biodiversity space formed by these three dimensions together. Furthermore, the IVs of these three dimensions were similar along an altitudinal gradient, indicating similar contributions by a given dimension in different environmental conditions. We highlight the importance of adopting a multidimensional approach when describing biodiversity, since richness (the proxy for taxonomic dimension), despite being the most commonly used, is an incomplete surrogate to capture the variation present in the biodiversity space of stream fish communities.     

Soil resource availability is much more important than soil resource heterogeneity in determining the species diversity and abundance of karst plant communities

Resource availability and heterogeneity are recognized as two essential environmental aspects to determine species diversity and community abundance. However, how soil resource availability and heterogeneity determine species diversity and community abundance in highly heterogeneous and most fragile karst landscapes is largely unknown. We examined the effects of soil resource availability and heterogeneity on plant community composition and quantified their relative contribution by variation partitioning. Then, a structural equation model (SEM) was used to further disentangle the multiple direct and indirect effects of soil resource availability on plant community composition. Species diversity was significantly influenced by the soil resource availability in shrubland and woodland but not by the heterogeneity in woodland. Abundance was significantly affected by both soil resource availability and heterogeneity, whereas variation partitioning results showed that soil resource availability explained the majority of the variance in abundance, and the contribution of soil resource heterogeneity was marginal. These results indicated that soil resource availability plays a more important role in determining karst plant community composition than soil resource heterogeneity. Our SEMs further found that the multiple direct and indirect processes of soil resource availability in determining karst species diversity and abundance were different in different vegetation types. Soil resource availability and heterogeneity both played a certain role in determining karst plant community composition, while the importance of soil resource availability far exceeded soil resource heterogeneity. We propose that steering community restoration and reconstruction should be highly dependent on soil resource availability, and multiple direct and indirect pathways of soil resource availability for structuring karst plant communities need to be taken into account.     

Biotic interactions hold the key to understanding metacommunity organisation

Biotic interactions are fundamental drivers governing biodiversity locally, yet their effects on geographical variation in community composition (i.e. incidence-based) and community structure (i.e. abundance-based) at regional scales remain controversial. Ecologists have only recently started to integrate different types of biotic interactions into community assembly in a spatial context, a theme that merits further empirical quantification. Here, we applied partial correlation networks to infer the strength of spatial dependencies between pairs of organismal groups and mapped the imprints of biotic interactions on the assembly of pond metacommunities. To do this, we used a comprehensive empirical dataset from Mediterranean landscapes and adopted the perspective that community assembly is best represented as a network of interacting organismal groups. Our results revealed that the co-variation among the beta diversities of multiple organismal groups is primarily driven by biotic interactions and, to a lesser extent, by the abiotic environment. These results suggest that ignoring biotic interactions may undermine our understanding of assembly mechanisms in spatially extensive areas and decrease the accuracy and performance of predictive models. We further found strong spatial dependencies in our analyses which can be interpreted as functional relationships among several pairs of organismal groups (e.g. macrophytes–macroinvertebrates, fish–zooplankton). Perhaps more importantly, our results support the notion that biotic interactions make crucial contributions to the species sorting paradigm of metacommunity theory and raise the question of whether these biologically-driven signals have been equally underappreciated in other aquatic and terrestrial ecosystems. Although more research is still required to empirically capture the importance of biotic interactions across ecosystems and at different spatial resolutions and extents, our findings may allow decision makers to better foresee the main consequences of human-driven impacts on inland waters, particularly those associated with the addition or removal of key species.     

Drivers of understorey biomass: tree species identity is more important than richness in a young forest

林下生物量影响因素：幼龄林树种特性比丰富度更重要 生物多样性与生态系统功能的正相关关系已被广泛报道,其主要来源于对草原生态系统的研究。然而,该结论并不一定适用于更复杂的环境,例如具有不同垂直层次的森林。举例而言,已有研究表明上层乔木树种丰富度与林下生产力降低有关。树种丰富度是否会通过增加(由于生境异质性)或降低(通过增强竞争)资源的可利用性进而影响林下生产力,以及林下生产力是否受树种特性的影响更大,这些影响机制都可能会随着时间的推移而改变。此外,研究还表明,丰富度-生产力关系随着环境背景的变化而改变。本研究利用可以操控树种丰富度的实验林场研究了这些不同垂直层位里的时间和环境动态。在中国亚热带森林生物多样性与生态系统功能(BEF-China)研究计划的框架下,我们在3年时间里沿树种丰富度梯度反复采集林下生物量样本,研究了不同环境处理中树种丰富度、树种特性和时间对林下生物量的影响。尽管我们发现乔木层特性对林下生物量有显著和一致的影响,但是树种丰富度对后者却不具有这种影响。另外,在森林结构层之间,可能并不存在单一的、具有普遍性的上层乔木树种丰富度与林下生产力的相关关系,并且与上层乔木相关的环境因素(如透光率)对林下生产力的贡献程度会随着时间而变化。总体而言,我们的结果表明,在研究森林结构层之间的关系时应将时间动态变化考虑在内。     

三亚岩相潮间带底栖海藻群落结构及其季节变化

为了解三亚潮间带大型海藻生态现状,布设6条岩相断面,于2008年1—11月进行了四季野外的调查,并使用物种多样性指数与聚类分析研究了潮间带大型海藻四季的群落结构和多样性变化。调查共鉴定出大型底栖藻类130种,隶属于4门75属,其中红藻门41属67种、褐藻门16属31种、绿藻门15属29种、蓝藻门3属3种。潮间带海藻种类数季节变化不大,并呈低潮带>中潮带>高潮带的垂直分布特征,且中低潮带有共同分布种,夏季尤为普遍。潮间带海藻夏冬两季平均生物量高于春秋两季,但并无显著差异。优势种季节变化明显:春季有波利团扇藻Padina boryana、日本仙菜Ceramium japonicum、半叶马尾藻Sargassum hemiphyllum、海柏Polyopes polyideoides,夏季有波状软凹藻Chondrophycus undulates、冠叶马尾藻Sargassum cristaefolium、宽扁叉节藻Amphiroa dilatata、石花菜Gelidium amansii,秋季有冠叶马尾藻、波状软凹藻、叶状铁钉菜Ishige foliacea,冬季有瓦氏马尾藻Sargassum vachellianum、苔状鸭毛藻Symphyocladia marchantioides、珊瑚藻Corallina officinalis、波利团扇藻、日本仙菜。群落多样性冬高夏低:Shannon多样性和Margalef丰富度指数最大值出现在冬季,Shannon多样性和Pielou均匀度指数最低值出现在夏季。区域底栖藻类以暖水性热带-亚热带种为主,其次为温水性的暖温带种类,基本符合南海南区暖水区系特点。研究表明,尽管三亚潮间带底栖海藻种类数与生物量上并无显著的季节差异,但群落结构与多样性均显示出一定的季节变化。     

山东蒙山6种造林树种40余年成林效果评价

植被恢复一直是恢复生态学研究的核心问题和首要解决目标。该文拟评估山东蒙山森林植被恢复与重建的现状和程度, 评价不同造林树种对植物多样性的影响, 筛选一批造林工具种, 为今后沂蒙山区森林植被恢复与重建的调控和预测提供依据。采用样地法和样方法, 选择林龄超过40年的6种主要人工林为样地, 采用典型取样法进行林内调查。根据乔木层、灌木层和草本层的物种丰富度、Shannon-Wiener多样性指数、Simpson多样性指数和Pielou均匀度指数评价物种多样性, 分析乔木径级分布, 判断植物发展类型。结果表明: 乔木层、灌木层和草本层的4种多样性指数较为一致地显示赤松(Pinus densiflora)、栓皮栎(Quercus variabilis)、黑松(Pinus thunbergii)、日本落叶松(Larix kaempferi)和刺槐(Robinia pseudoacacia)的成林效果较好, 油松(Pinus tabuliformis)相对较差。6种人工林群落灌木层和草本层的4种多样性指数基本无显著差异, 而乔木层中, 油松人工林群落的4种多样性指数与黑松人工林、刺槐人工林、栓皮栎人工林和日本落叶松人工林存在部分显著差异(p < 0.05)。从整体上看, 人工林群落灌木层发育最好, 4种多样性指数均为灌木层>乔木层>草本层, 且差异大多极显著(p < 0.01)。研究发现: 乔木扩展种29种、隐退种3种、稳定侵入种9种和随机侵入种11种, 表明人工林群落正处于向森林演替的过程中。数据显示: 3种隐退种赤松、油松和日本落叶松均为群落局部优势种, 赤松和油松种群更新困难, 日本落叶松完全没有更新幼苗。作者认为林下发达的灌草层可能是阻碍针叶林天然更新的关键因素。评估筛选出15种造林工具种: 早期开荒工具种(A类) 7种和后期顶级工具种(B类) 8种。其中A1类(建群种) 2种: 赤松和油松, A2类(伴生种) 5种: 黄檀(Dalbergia hupeana)、花曲柳(Fraxinus rhynchophylla)、君迁子(Cerasus serrulata)、山合欢(Albizia kalkora)和鹅耳枥(Carpinus turczaninowii); B1类(建群种) 2种: 栓皮栎和麻栎(Quercus acutissima), B2类(伴生种) 6种: 水榆花楸(Sorbus alnifolia)、槲树(Quercus dentata)、山樱花(Diospyros lotus)、小叶朴(Celtis bungeana)、大叶朴(Celtis koraiensis)和三桠乌药(Lindera obtusiloba)。     

Climate and geographic distance are more influential than rivers on the beta diversity of passerine birds in Amazonia

Variation in the spatial structure of communities in terms of species composition (beta diversity) is affected by different ecological processes, such as environmental filtering and dispersal limitation. Large rivers are known as barriers for species dispersal (riverine hypothesis) in tropical regions. However, when organisms are not dispersal limited by geographic barriers, other factors, such as climatic conditions and geographic distance per se, may affect species distribution. In order to investigate the relative contribution of major rivers, climate and geographic distance on Passeriformes beta diversity, we divided Amazonia into 549 grid cells (1° of latitude and longitude) and obtained data of species occurrence, climate and geographic position for each cell. Beta diversity was measured using taxonomic, phylogenetic and functional metrics of composition. The influence of climatic variables, geographic distance and rivers on these metrics was tested using regression analyses. Passerine beta diversity is characterized mainly by the change in species taxonomic identity and in phylogenetic lineages across climatic gradients and over geographic distance. However, species with similar traits are found throughout the entire Amazonia. The size of rivers was proportional to their effect on species composition. However, climate and geographic distance are relatively more important than rivers for Amazonian taxonomic and phylogenetic species composition.     

Sympatric sister species in rodents are more chromosomally differentiated than allopatric ones: implications for the role of chromosomal rearrangements in speciation

A meta‐analysis approach was used to test for chromosomal speciation in rodents. Forty‐one pairs of sister species, identified in the two most species‐rich rodent families (Cricetidae and Muridae), were used as phylogenetically independent data points, each resulting from a speciation event. About 30% of sister species have an identical karyotype. There was a significant difference in the number of chromosomal differences between sympatric and allopatric sister species, compatible with a direct role of chromosomal rearrangements in speciation.     

Patterns of tree species richness in relation to environment in southeastern New South Wales,Australia

Abstract We present regression models of species richness for total tree species, two growth forms, rainforest trees (broadleaf evergreens) and eucalypts (sclerophylls), and two large subgenera of Eucalyptus. The correlative models are based on a data set of 166 tree species from 7208 plots in an area of southeastern New South Wales, Australia. Eight environmental variables are used to model the patterns of species richness, four continuous variables (mean annual temperature, rainfall, radiation and plot size), plus four categorical factors (topographic position, lithology, soil nutrient level and rainfall seasonality). Generalized linear modelling with curvilinear and interaction terms, is used to derive the models. Each model shows a significant and differing response to the environmental predictors. Maximum species richness of eucalypts occurs at high temperatures, and intermediate rainfall and radiation conditions on ridges with aseasonal rainfall and intermediate nutrient levels. Maximum richness of rainforest species occurs at high temperatures, intermediate rainfall and low radiation in gullies with summer rainfall and high nutrient levels. The eucalypt subgenera models differ in ways consistent with experimental studies of habitat preferences of the subgenera. Curvilinear and interaction terms are necessary for adequate modelling. Patterns of richness vary widely with taxonomic rank and growth form. Any theories of species diversity should be consistent with these correlative models. The models are consistent with an available energy hypothesis based on actual evapotranspiration. We conclude that studies of species richness patterns should include local (e.g. soil nutrients, topographic position) and regional (e.g. mean annual temperature, annual rainfall) environmental variables before invoking concepts such as niche saturation.     

Habitat quality is more important than matrix quality for bird communities in protected areas

Protected areas are meant to preserve native local communities within their boundaries, but they are not independent from their surroundings. Impoverished habitat quality in the matrix might influence the species composition within the protected areas through biotic homogenization. The aim of this study was to determine the impacts of matrix quality on species richness and trait composition of bird communities from the Finnish reserve area network and whether the communities are being subject of biotic homogenization due to the lowered quality of the landscape matrix. We used joint species distribution modeling to study how characteristics of the Finnish forest reserves and the quality of their surrounding matrix alter species and trait compositions of forest birds. The proportion of old forest within the reserves was the main factor in explaining the bird community composition, and the bird communities within the reserves did not strongly depend on the quality of the matrix. Yet, in line with the homogenization theory, the beta‐diversity within reserves embedded in low‐quality matrix was lower than that in high‐quality matrix, and the average abundance of regionally abundant species was higher. Influence of habitat quality on bird community composition was largely explained by the species' functional traits. Most importantly, the community specialization index was low, and average body size was high in areas with low proportion of old forest. We conclude that for conserving local bird communities in northern Finnish protected forests, it is currently more important to improve or maintain habitat quality within the reserves than in the surrounding matrix. Nevertheless, we found signals of bird community homogenization, and thus, activities that decrease the quality of the matrix are a threat for bird communities.