Response to Akcali et al.: What keeps them from mingling

The salt marsh beetle Pogonus chalceus has diverged into short‐ and long‐winged populations, which can be found in hundreds of interlaced habitat patches that sharply differ in their hydrological regime. In a recent study, we investigated how a behavioral adaptation to these contrasting hydrological regimes might drive the neat spatial sorting of the ecotypes and facilitate divergence. Simulated inundation experiments revealed that the ecotypes differ in dispersal response toward the hydrological regime and that this is a plastic behavior imprinted during the nondispersive immature stages. In their comment, Akcali and Porter (2017) question if the observed plastic response would effectively reduce gene‐flow in this system. Based on the natural history of this species we demonstrate why this is plausible and we propose future avenues that may further strengthen this conclusion. In addition, Akcali and Porter (2017) illustrate some current inconsistencies in the use of terminology of the different habitat choice mechanisms. We agree that proper classification of the existing theories is indispensable in advancing the field of habitat choice mechanisms and their effect on gene flow, but the unique attributes of any given biological system may thwart this exercise.     

Using connectivity to identify climatic drivers of local adaptation: a response to Macdonald et al.

Macdonald et al. (Ecol. Lett., 21, 2018, 207–216) proposed an analytical framework for identifying evolutionary processes underlying trait‐environment relationships observed in natural populations. Here, we propose an expanded and refined framework based on simulations and bootstrap‐based approaches, and we elaborate on an important statistical caveat common to most datasets.     

Habitat selection as a source of inter‐specific differences in recruitment of two diadromous fish species

• 1 For aquatic species with highly dispersive offspring, the addition of new individuals into an area (recruitment) is a key process in determining local population size so understanding the causes of recruitment variability is critical. While three general causative mechanisms have been identified (the supply of individuals, habitat selection and mortality), we have a limited understanding of how variation in each is generated, and the consequences this may have for the spatial and temporal distribution of recruits.
• 2 We examined whether active habitat selection during settlement could be the cause of variability in populations of two diadromous fish species using a field survey and laboratory‐based choice experiments. If larval behaviour is important, we predicted there would be inter‐specific differences in abundance between sites during the survey, and that larvae would prefer water collected from sites with higher conspecific abundances during the experiments.
• 3 During the field survey, significant differences were detected between two rivers (the Cumberland and Grey), with one species (Galaxias maculatus) found in higher abundances at one site (the Cumberland River) while comparable numbers of a closely related species (Galaxias brevipinnis) were caught at both sites. Laboratory choice experiments were conducted to determine whether larval preferences during settlement could be the cause of these differences. G. maculatus larvae showed a preference for freshwater over saltwater, indicating that the fish may be responding to reduced salinities around river mouths during settlement. The results of a second experiment were consistent with the notion that larval preferences could be the mechanism driving differences in the populations of the two rivers, with G. maculatus preferring water collected from the Cumberland River while G. brevipinnis did not prefer water from either river.
• 4 These results demonstrate that active habitat selection may be important in establishing spatial patterns of larvae at settlement, and that multiple cues are likely to be involved. This study also demonstrates that the behaviours exhibited by individuals can strongly influence the structure and dynamics of populations of aquatic species with complex life cycles.

     

Local adaptation and matching habitat choice in female barn owls with respect to melanic coloration

Local adaptation is a major mechanism underlying the maintenance of phenotypic variation in spatially heterogeneous environments. In the barn owl (Tyto alba), dark and pale reddish-pheomelanic individuals are adapted to conditions prevailing in northern and southern Europe, respectively. Using a long-term dataset from Central Europe, we report results consistent with the hypothesis that the different pheomelanic phenotypes are adapted to specific local conditions in females, but not in males. Compared to whitish females, reddish females bred in sites surrounded by more arable fields and less forests. Colour-dependent habitat choice was apparently beneficial. First, whitish females produced more fledglings when breeding in wooded areas, whereas reddish females when breeding in sites with more arable fields. Second, cross-fostering experiments showed that female nestlings grew wings more rapidly when both their foster and biological mothers were of similar colour. The latter result suggests that mothers should particularly produce daughters in environments that best match their own coloration. Accordingly, whiter females produced fewer daughters in territories with more arable fields. In conclusion, females displaying alternative melanic phenotypes bred in habitats providing them with the highest fitness benefits. Although small in magnitude, matching habitat selection and local adaptation may help maintain variation in pheomelanin coloration in the barn owl.     

Background choice as an anti-predator strategy: the roles of background matching and visual complexity in the habitat choice of the least killifish

Because background matching improves concealment, prey animals have traditionally been expected to prefer parts of the habitat that match their visual appearance. However, empirical support for this is scarce. Moreover, this idea has recently been challenged by an alternative hypothesis: visual complexity of the background impedes prey detection, and hence prey could instead prefer complex parts of the habitat. We used the least killifish to test, with and without predation threat, for the importance of the visual similarity between the fish and the background, and the level of visual complexity of the background. We observed their choice between backgrounds patterned with elements based on the longitudinal black stripe of the fish. Predation risk was important under some circumstances, and induced a preference for a background of matching horizontal stripes compared with mismatching vertical stripes. Interestingly, females under predation threat showed a preference for a complex background of randomly oriented and overlapping stripes compared with matching stripes, whereas males did not discriminate between these two. Additionally, males showed a preference for matching stripes compared with complex shapes, whereas females did not discriminate between these backgrounds. We conclude that matching is important in the choice for safe habitat, but some aspects of visual complexity may override or act together with background matching.     

Habitat choice in shoals of roach as a function of water temperature and feeding rate

Temperature and food availability are two important factors which affect fish growth and therefore are expected to influence habitat choice in fish. In this study, shoals of 16 juvenile roach, Rutilus rutilus , were given a choice between two chambers that differed in temperature by 1·5°C or 3°C whereas food availability was the same in both chambers (ratio 1 : 1) or higher in the colder one (ratio 4 : 1). The number of fish in each chamber was recorded for 10 min each during a pre-feeding, feeding and post-feeding period. Roach generally preferred the warmer over the colder chamber during the pre-feeding periods. Temperature had a significant effect on the distribution of fish during all three time periods whereas food availability was a significant factor only during the feeding period. The important role of temperature was emphasized further by the fact that a relatively small difference in the temperature gradient of 1·5°C had a stronger effect on fish distribution than a four times higher feeding rate during the feeding period. The implications for growth rates of such short-term decision-making of roach are discussed.     

A comment on García et al. (2005, 2007) and related papers on mating patterns and gene dispersal in Prunus mahaleb

In two studies on mating patterns and spatial components of pollen and seed dispersal of Prunus mahaleb based on parentage analysis, García et al. (2005, 2007) depicted their 196 focal trees as a spatially isolated population where all reproductive trees had been genotyped. Additional distributional data for P. mahaleb trees in their study area, however, revealed that García and colleagues’ depiction of their study system bears little resemblance to reality. The trees these authors studied did not form a discrete, geographically isolated population. Around 300 ungenotyped reproductive trees occurred within the 1.5‐km distributional gap to the nearest population proclaimed by García and colleagues. Since exhaustive sampling of potential parental genotypes is essential in parentage analyses, the occurrence of a large number of ungenotyped trees in the immediate neighbourhood of focal trees can severely affect the main conclusions of García et al. (2005, 2007) as well as of several related publications on gene dispersal and mating patterns of P. mahaleb conducted on the same trees and relying on the same false premises of spatial isolation and exhaustive sampling.     

Reliability of map accuracy assessments: A comment on Hunter et al. (2016)

Map validation data that are ambiguously allocated to map units and collected via poorly designed sampling methods are not statistically reliable and will misrepresent map quality. A recent paper published in Ecological Management and Restoration (Ecological Management & Restoration, 17, 2016 and 40) reported that a map in south‐eastern Australia provided little or no predictive accuracy based on new field data, but the validation suffered from the aforementioned pitfalls. In this comment, we outline the basic guidelines for a robust, reliable and transparent accuracy assessment of thematic maps, pointing out where (Ecological Management & Restoration, 17, 2016 and 40) fails to meets these guidelines.     

Matching habitat choice causes directed gene flow: a neglected dimension in evolution and ecology

Gene flow among populations is typically thought to be antagonistic to population differentiation and local adaptation. However, this assumes that dispersing individuals disperse randomly with respect to their ability to use the environment. Yet dispersing individuals often sample and compare environments and settle in those environments that best match their phenotype, causing directed gene flow, which can in fact promote population differentiation and adaptation. We refer to this process as "matching habitat choice." Although this process has been acknowledged by several researchers, no synthesis or perspective on its potentially widespread importance exists. Here we synthesize empirical and theoretical studies, and offer a new perspective that matching habitat choice can have significant effects on important and controversial topics. We discuss the potential implications of matching habitat choice for the degree and rate of local adaptation, the evolution of niche width, adaptive peak shifts, speciation in the presence of gene flow, and on our view and interpretation of measures of natural selection. Because of its potential importance for such a wide range of topics, we call for heightened empirical and theoretical attention for this neglected dimension in evolutionary and ecological studies.     

Reliability of map accuracy assessments: A reply to Roff et al. (2016)

Roff et al. (Ecological Management and Restoration, 17 , 2016, 000) provide a discussion of the criteria expected for the best approach to validation of mapping programs and uses Hunter (Ecological Management & Restoration 17 , 2016, 40) to highlight issues involved. While we support the general principles outlined, we note that the review does not apply the same standards to Sivertsen et al. (Greater Hunter Native Vegetation Mapping Geodatabase Guide (Version 4.0). Office of Environment and Heritage, Department of the Premier and Cabinet, Sydney, Australia, 2011), the original document critiqued by Hunter (Ecological Management & Restoration 17 , 2016, 40). The Hunter (Ecological Management & Restoration 17 , 2016, 40) validation was based on a larger sample size, greater sampling within mapping units and greater representation of landscapes than Sivertsen et al. (Greater Hunter Native Vegetation Mapping Geodatabase Guide (Version 4.0). Office of Environment and Heritage, Department of the Premier and Cabinet, Sydney, Australia, 2011). Survey and validation sites being placed along public roads and lands are common to both the general Office of Environment and Heritage (OEH) and Hunter (Ecological Management & Restoration 17 , 2016, 40) validation methodologies. Thus, the criticisms of Roff et al. (Ecological Management and Restoration, 17 , 2016, 000) of the Hunter (Ecological Management & Restoration 17 , 2016, 40) approach apply equally, if not more, to Sivertsen et al. (Greater Hunter Native Vegetation Mapping Geodatabase Guide (Version 4.0). Office of Environment and Heritage, Department of the Premier and Cabinet, Sydney, Australia, 2011). We outline in the article how the Roff et al. (Ecological Management and Restoration, 17 , 2016, 000) critique was selective and in some cases incorrect in its analysis of issues presented in Hunter (Ecological Management & Restoration 17 , 2016, 40) and did not apply the same criteria to their own work. We conclude by discussing future directions for validating and mapping vegetation communities.     

Persistence and recolonisation determine success of bog restoration for aquatic invertebrates: a comment on Mazerolle et al. (2006)

1. Mazerolle et al. (2006) concluded that some aquatic invertebrate species, including bog‐associated species, readily colonise man‐made bog pools. In contrast, in Dutch bog remnants Van Duinen et al. (2003) found that a considerable number of bog‐associated species do not colonise newly created bog pools. 2. The conclusion of Mazerolle et al. (2006) is based on vagile aquatic invertebrates. Here, we question whether their conclusion can be extended to more sedentary species, which were not captured in the Canadian study, but made up an important part of the invertebrate assemblage in the Dutch study. This discrepancy could be caused by sampling artefacts, low colonisation rates of these species or an incomplete restoration of site conditions. 3. In Canada, chances of recolonisation may be higher than in the Netherlands, as natural and near‐natural bogs are more extensive. In the Netherlands, with low chances of recolonisation, persistence of species may be more important. To disentangle the relative importance of persistence and recolonisation, evaluations of the success of restoration projects need to cover the entire invertebrate assemblage, including both vagile and more sedentary species.     

Habitat differentiation vs. isolation-by-distance: the genetic population structure of Elymus athericus in European salt marshes

We investigated genetic differentiation among populations of the clonal grass Elymus athericus, a common salt-marsh species occurring along the Wadden Sea coast of Europe. While E. athericus traditionally occurs in the high salt marsh, it recently also invaded lower parts of the marsh. In one of the first analyses of the genetic population structure in salt-marsh species, we were interested in population differentiation through isolation-by-distance, and among strongly divergent habitats (low and high marsh) in this wind- and water-dispersed species. High and low marsh habitats were sampled at six sites throughout the Wadden Sea. Based on reciprocal transplantation experiments conducted earlier revealing lower survival of foreign genotypes we predicted reduced gene flow among habitats. Accordingly, an analysis with polymorphic cross-species microsatellite primers revealed significant genetic differentiation between high and low marsh habitats already on a very small scale (< 100 m), while isolation-by-distance was present only on larger scales (60-443 km). In an analysis of molecular variance we found that 14% of the genetic variance could be explained by the differentiation between habitats, as compared to only 8.9% to geographical (isolation-by-distance) effects among six sites 2.5-443 km distant from each other. This suggests that markedly different selection regimes between these habitats, in particular intraspecific competition and herbivory, result in habitat adaptation and restricted gene flow over distances as small as 80 m. Hence, the genetic population structure of plant species can only be understood when considering geographical and selection-mediated restrictions to gene flow simultaneously.     

Habitat use and ecology of Wattled Curassows on islands in the lower Caquetá River,Colombia

ABSTRACT Despite being endangered, little is known about the natural history and habitat use of Wattled Curassows (Crax globulosa). From September 2008 to March 2009, we examined habitat associations of this species on three islands in the lower Caquetá River, Colombia. Observations of curassows were made during line‐transect walks, and habitat variables were measured at points where curassows were and were not observed along those transects to assess potential habitat preferences. A total of 182 sightings yielded encounter rates ranging from 0.1 to 0.89 observations/km across transects. Curassows were more likely to be observed close to the river and to lakes on the islands. Additionally, the importance of the river increased as the distance to internal water sources increased. Other habitat characteristics, including tree density, tree diameter, understory density, and canopy cover, did not differ between areas where Wattled Curassows were and were not observed. Flock size ranged from 1 to 9 individuals; most solitary individuals were males and flocks (>2 individuals) generally consisted of more females than males. The association of Wattled Curassows with water sources during the low‐water season may have conservation implications because it could increase their vulnerability to anthropogenic activities such as agricultural activities, fishing, and hunting. As a result, conservation of these curassows on islands in the lower Caquetá River will likely depend on local support.     

Population Structure, Mobility and Habitat Preferences of the Violet Copper Lycaena Helle (Lepidoptera: Lycaenidae) in Western Germany: Implications for Conservation

We describe population structure, mobility and habitat preferences of the butterfly Lycaena helle using a survey of the populations in the Westerwald area (Western Germany) and mark-recapture techniques. Three out of 83 recorded populations were intensively studied in 1995. In all, 1596 individuals (537 females) were uniquely marked. The average adult residence time was 8 days, the maximum 34 days. L. helle is extremely sedentary. Average distances between first and subsequent captures were 37 and 61 meters for males and females respectively. Population-specific differences are interpreted as being caused by the influence of barriers and corridors. The potential for colonization is regarded as poor, and isolated populations seem to be under a higher risk of extinction than other ones. Preferred habitats were abandoned moist meadows with rich aspects of Polygonum bistorta on sheltered, warm, and humid stands. Owing to the destruction of natural habitats (moorland) L. helle now colonizes almost exclusively anthropogenic ephemeral habitats (abandoned moist meadows) in Central Europe. This results in serious conservation problems, as the biology of the species does not seem to be adapted to a high turn-over rate of habitats.