Internal reference frame for the representation and storage of visual information during standing

The roles of different afferent systems in the organization of an internal reference frame was studied. The task of visual comparison was performed by subjects under different experimental conditions: in the upright standing position and with the body or head inclined in the frontal plane and with the visual information about an external environment available or not available. It was shown that the dominant orientation of a referent stimulus (the minimum value of the mean error in the reproduction of the stimulus and the minimal variability of the error) was correlated with the body position, mainly the position of the head, more than with the gravitational or visual vertical, even when the visual information was available. This means that the proprioceptive information about the longitudinal axis of body, rather than gravity, is mainly used by the central nervous system for creating the internal representing of vertical during standing.     

A neural representation of prior information during perceptual inference

Perceptual inference is biased by foreknowledge about what is probable or possible. How prior expectations are neurally represented during visual perception, however, remains unknown. We used functional magnetic resonance imaging to measure brain activity in humans judging simple visual stimuli. Perceptual decisions were either biased in favor of a single alternative (A/ approximately A decisions) or taken without bias toward either choice (A/B decisions). Extrastriate and anterior temporal lobe regions were more active during A/ approximately A than A/B decisions, suggesting multiple representations of prior expectations within the visual hierarchy. Forward connectivity was increased when expected and observed perception diverged ("prediction error" signals), whereas prior expectations fed backward from higher to lower regions. Finally, the coincidence between expected and observed perception activated orbital prefrontal regions, perhaps reflecting the reinforcement of prior expectations. These data support computational and quantitative models proposing that a visual percept emerges from converging bottom-up and top-down signals.     

Internal models for visual perception

 Although the extrapolation of past perceptual history into the immediate and distant future is a fundamental phenomenon in everyday life, the underlying processing mechanisms are not well understood. A network model consisting of interacting excitatory and inhibitory cell populations coding for stimulus position is used to study the neuronal population response to a continuously moving stimulus. An adaptation mechanism is proposed that offers the possibility to control and modulate motion-induced extrapolation without changing the spatial interaction structure within the network. Using an occluder paradigm, functional advantages of an internally generated model of a moving stimulus are discussed. It is shown that the integration of such a model in processing leads to a faster and more reliable recognition of the input stream and allows for object permanence following occlusion. The modeling results are discussed in relation to recent experimental findings that show motion-induced extrapolation. Received: 19 December 2001 / Accepted: 26 November 2002 / Published online: 3 April 2003 Correspondence to: W. Erlhagen (e-mail: wolfram.erlhagen@mct.uminho.pt) Acknowledgements. The author would like to thank D. Jancke for useful discussions and two anonymous reviewers for helpful comments and suggestions on a previous version of this paper. This research was supported by a European grant (IST-2000-29689) and by the Portuguese Science Foundation (POSI/SRI/38051/2001).     

An architecture for biological information extraction and representation

Motivations: Technological advances in biomedical research are generating a plethora of heterogeneous data at a high rate. There is a critical need for extraction, integration and management tools for information discovery and synthesis from these heterogeneous data. RESULTS: In this paper, we present a general architecture, called ALFA, for information extraction and representation from diverse biological data. The ALFA architecture consists of: (i) a networked, hierarchical, hyper-graph object model for representing information from heterogeneous data sources in a standardized, structured format; and (ii) a suite of integrated, interactive software tools for information extraction and representation from diverse biological data sources. As part of our research efforts to explore this space, we have currently prototyped the ALFA object model and a set of interactive software tools for searching, filtering, and extracting information from scientific text. In particular, we describe BioFerret, a meta-search tool for searching and filtering relevant information from the web, and ALFA Text Viewer, an interactive tool for user-guided extraction, disambiguation, and representation of information from scientific text. We further demonstrate the potential of our tools in integrating the extracted information with experimental data and diagrammatic biological models via the common underlying ALFA representation. CONTACT: aditya_vailaya@agilent.com.     

Orality,rhythmography and visual representation

This paper explores the epistemological problems which occur in analysis of orality through visual images. Narrow disciplinary orientations are argued to impede understanding of what the semiotician Charles Sanders Peirce calls the final interpretant, that which would be agreed by the scholarly community to be the ultimate opinion. When filmmakers or scholars take the imaging medium for granted they fail to “see” the visual codes which structure the oral content and fail to reach the final interpretant. In the case study described below, the video camera was the provocation of the oral message in the first place. The paper provides some methods for visualizing oral information in such a way that the rhythms and balances of the original pro‐filmic oral event are identified and retained when captured in print or on video. The method is developed from Peirce's categories of interpretant and methodology of phaneroscopy, manifested in three levels of making sense: a) the nature of the encounter; b) the experience of the interacting parties; and c) how each reaches intelligibility on the matter.     

Temporal encoding of spatial information during active visual fixation

Humans and other species continually perform microscopic eye movements, even when attending to a single point. These movements, which include drifts and microsaccades, are under oculomotor control, elicit strong neural responses, and have been thought to serve important functions. The influence of these fixational eye movements on the acquisition and neural processing of visual information remains unclear. Here, we show that during viewing of natural scenes, microscopic eye movements carry out a crucial information-processing step: they remove predictable correlations in natural scenes by equalizing the spatial power of the retinal image within the frequency range of ganglion cells' peak sensitivity. This transformation, which had been attributed to center-surround receptive field organization, occurs prior to any neural processing and reveals a form of matching between the statistics of natural images and those of normal eye movements. We further show that the combined effect of microscopic eye movements and retinal receptive field organization is to convert spatial luminance discontinuities into synchronous firing events, beginning the process of edge detection. Thus, microscopic eye movements are fundamental to two goals of early visual processing: redundancy reduction and feature extraction.     

Standard data model representation for taxonomic information

The names used by biologists to label the observations they make are imprecise. This is an issue as workers increasingly seek to exploit data gathered from multiple, unrelated sources on line. Even when the international codes of nomenclature are followed strictly the resulting names (Taxon Names) do not uniquely identify the taxa (Taxon Concepts) that have been described by taxonomists but merely groups of type specimens. A standard data model for exchange of taxonomic information is described. It addresses this issue by facilitating explicit communication of information about Taxon Concepts and their associated names. A representation of this model as a XML Schema is introduced and the implications of the use of Globally Unique Identifiers discussed.     

Dual coding hypotheses for neural information representation

Information is represented and processed in neural systems in various ways. The rate coding, population coding, and temporal coding are typical examples of representation. It is a hot issue in neuroscience what kinds of coding is used in real neural systems. Different regions of the brain may resort to different coding strategies. Moreover, recent studies suggest the possibility of dual or multiple codes, in which different modes of information are embedded in one neural system. The present paper reviews various possibilities of neural codes focusing on dual codes.     

Reference frame for rapid visual processing of line orientation.

Detection of a uniquely oriented line element in a background field of uniformly oriented line elements depends on the orientation of the background field. Is the orientational reference frame for this anisotropy entirely dependent on the orientations of structures outside the line-element display, the spatial regularity of the stimulus elements, and the direction of gravity? The effects of these potential cues were investigated in target-detection experiments with brief displays. The anisotropy was found whether or not gravitational or visual cues defined an orientational reference frame. Stimulus orientation may be coded with respect to the retina or body axis in rapid visual processing.     

Probabilistic pathway representation of cognitive information

We present for mental processes the program of mathematical mapping which has been successfully realized for physical processes. We emphasize that our project is not about mathematical simulation of the brain's functioning as a complex physical system, i.e., mapping of physical and chemical processes in the brain on mathematical spaces. The project is about mapping of purely mental processes on mathematical spaces. We present various arguments--philosophic, mathematical, information, and neurophysiological--in favor of the p-adic model of mental space. p-adic spaces have structures of hierarchic trees and in our model such a tree hierarchy is considered as an image of neuronal hierarchy. Hierarchic neural pathways are considered as fundamental units of information processing. As neural pathways can go through the whole body, the mental space is produced by the whole neural system. Finally, we develop the probabilistic neural pathway model in that mental states are represented by probability distributions on mental space.     

Spectral analysis of the human body sway during standing on firm and compliant surfaces under different visual conditions

Effects of different visual conditions on the vertical posture maintenance were compared in subjects standing on a firm or compliant surface. These visual conditions included a motionless visual environment (MVE), eyes-closed condition (EC), and a virtual visual environment (VVE). The VVE consisted of two planes: the foreground and background. The foreground displayed a room window with adjacent walls, and the background was represented by an aqueduct with the adjacent landscape. The VVE was destabilized by inducing either the cophased or the antiphased relation between the foreground of the visual scene and the body sway. We evaluated changes in the amplitude spectra of two elementary variables calculated from the trajectories of the plantar center of pressure (CoP) displacements in the anteroposterior and lateral directions, namely, the trajectories for the center of gravity projections on the support (the CG variable) and the differences between the CoP and CG trajectories (the CoP–CG variable).The CG trajectory was considered as a controlled variable, and the difference between the CoP and CG trajectories were considered as a variable related to the body acceleration and reflecting changes in the resultant stiffness in ankle joints. The rootmean-square (RMS) values for the spectra of both variables calculated from the body sway in the anteroposterior direction in standing on a firm support decreased proportionately with antiphased relation between the foreground and the body sway and increased with the cophased relation, compared with the RMS calculated for the MVE conditions. RMS for the spectra of the CG variable in the cophased relation were nearly the same, as in standing with eyes closed (EC), while the RMS for the spectra of the CoP–CG variable were significantly less than with EC. The body sway during standing on a compliant support significantly increased in both the anteroposterior and the lateral directions under all visual conditions. RMS for the spectra of both variables with EC increased considerably higher than in the cophased relation. Furthermore, the RMS for the spectra of the CG variable calculated from the body sway in the lateral direction on a compliant support was substantially higher in the antiphased relation than in the cophased relation, whereas the RMS for the spectra of the CoP–CG variable under both conditions had similar values. The analysis of body sway and the results under some visual conditions have shown that the amplitude characteristics of the CG and CoP–CG variables changed not always proportionately with the passage from standing on a firm support to a compliant support. It is suggested that the found disproportion of changes in these two variables is probably associated with the contribution of another additional factor to the process of postural control, the passive elastic component of musculo-articular stiffness generated by fascial-tendon tissues.     

The roles of visual and proprioceptive information during motor program choice in frogs

Previous studies have shown that leopard frogs, Rana pipiens, use tongue prehension to capture small prey and jaw prehension to capture large prey. After hypoglossal nerve transection, the frogs fail to open their mouths when attempting to feed on small prey, but open their mouths and capture large prey. Here, we investigate how visual information about the prey and proprioceptive information from the tongue interact to influence the motor program choice. Using pieces of earthworm of various sizes, we found that Rana exhibits two different behavior patterns based on prey size. The frogs captured the 1.5-cm prey using tongue prehension, whereas 2.0-cm and larger prey were captured using jaw prehension. After hypoglossal transection, the frogs never opened their mouths when they tried to feed on 1.5-cm prey. When feeding on 3.0-cm and larger prey after transection, they always opened their mouths and captured the prey using jaw prehension. When offered 2.0-cm prey, they alternated randomly between opening and not opening the mouth. Therefore, deafferentation changed the pattern of motor program choice at the behavioral border. This implies that afferents from the tongue interact with visual input to influence motor program choice.     

A common frame of reference for learned and communicated vectors in honeybee navigation

Humans draw maps when communicating about places or verbally describe routes between locations. Honeybees communicate places by encoding distance and direction in their waggle dances. Controversy exists not only about the structure of spatial memory but also about the efficiency of dance communication. Some of these uncertainties were resolved by studies in which recruits' flights were monitored using harmonic radar. We asked whether the two sources of vector information--the previously learned flight vector to a food source and the communicated vector--are represented in a common frame of spatial reference. We found that recruits redirect their outbound flights and perform novel shortcut flights between the communicated and learned locations in both directions. Guidance by beacons at the respective locations or by the panorama of the horizon was excluded. These findings indicate a spatial reference based on either large-scale vector integration or a common geocentric map-like spatial memory. Both models predict a memory structure that stores the spatial layout in such a way that decisions are made according to estimated distances and directions. The models differ with respect to the role of landmarks and the time of learning of spatial relations.