Tracing nitrate sources using the isotopic composition of skeletal-bound organic matter from the calcareous green algae Halimeda

Coral Reefs - The nitrogen (N) isotopic composition (δ15N) of water column nitrate (NO3−) reveals important information about the source(s) of N, and/or the transformation processes...     

Gradient-dominated ecosystems: sources and regulatory functions of dissolved organic matter in freshwater ecosystems

The emergent wetland and littoral components of the land-water zone are functionally coupled by the amounts and types of dissolved organic matter that are released, processed, transported to, and then further processed within the recipient waters. Operational couplings and integrations in freshwater ecosystems occur along physical and metabolic gradients of a number of scales from micrometer to kilometer dimensions. The operation and turnover of the microbial communities, largely associated with surfaces, generate the metabolic foundations for material fluxes along larger-scale gradients. Because of the predominance of small, shallow freshwater bodies, most dissolved organic carbon (DOC) of lacustrine and riverine ecosystems is derived from photosynthesis of higher plants and microflora associated with detritus, including sediments, and is only augmented by photosynthesis of phytoplankton. As the dissolved organic compounds generated in the wetland and littoral interface regions move toward the open-water regions of the ecosystems, partial utilization effects a selective increase in organic recalcitrance. Even though DOC from allochthonous and from interface sources is more recalcitrant than that produced by planktonic microflora, decomposition of the much larger interface quantities imported to the pelagic zone dominates ecosystem decomposition. The observed high sustained productivity of the land-water interface zone results from extensive recycling of essential resources (nutrients, inorganic carbon) and conservation mechanisms. On the average in lakes and streams, greater than 90 percent of the decomposition in the ecosystem is by bacteria utilizing DOM from non-pelagic sources of primary productivity. In addition to direct mineralization of DOC from non-pelagic sources, many of the organic compounds function indirectly to influence metabolism. New evidence is presented to demonstrate formation of complexes between humic and fulvic organic acids and extracellular enzymes. These complexes inhibit enzyme activity and can be transported within the ecosystem. The complex can be decoupled by mild ultraviolet photolysis with regeneration of enzyme activity in displaced locations.     

Tracing estuarine organic matter sources into the southern North Sea using C and N isotopic signatures

Sources and distribution of particulate organic matter in surface waters of the Humber and Thames estuaries and in the East Anglian plume in the southern North Sea were investigated in winter 2006/2007. Carbon (C) and nitrogen (N) stable isotopes provided evidence for the presence of three particulate organic matter sources; riverine plankton (δ¹³C ?30 ‰ and δ¹⁵N 7.9 ‰) identified in the Thames estuary only, marine plankton (average δ¹³C ?21.4 ‰ and δ¹⁵N 4.5 ‰) and a third source with an enriched ¹³C signature (>?16.7 ‰) and elevated C:N ratio (>12.7). Particulate organic matter with enriched ¹³C values were observed throughout the Humber estuary and at the marine end-member of the Thames estuary. While bacterial cycling of organic carbon undoubtedly takes place within these estuaries, these processes on their own are unlikely to account for the isotopic signatures seen. The ¹³C enriched organic matter source is suggested to be due to particulate organic matter input from marsh plants and seagrasses such as Spartina spp. and Zostera on the adjacent salt marshes and mudflats and/or macroalgae along the banks of the estuaries. This ¹³C enriched signal was also identified approximately 50 km offshore within the southern North Sea, in the East Anglian plume, which transports UK riverine water off-shore in a discrete plume. This plume therefore provides a mechanism to transport this estuarine derived organic matter pool offshore out of the estuaries. These results indicate that estuarine derived organic matter from marsh plants, seagrasses and/or macroalgae contributes to the southern North Sea organic matter pool and is therefore likely to contribute to winter-time shelf sea carbon and nitrogen cycles.     

Tannins in nutrient dynamics of forest ecosystems - a review

Tannins make up a significant portion of forest carbon pools and foliage and bark may contain up to 40% tannin. Like many other plant secondary compounds, tannins were believed to function primarily as herbivore deterrents. However, recent evidence casts doubts on their universal effectiveness against herbivory. Alternatively, tannins may play an important role in plant–plant and plant–litter–soil interactions. The convergent evolution of tannin-rich plant communities on highly acidic and infertile soils throughout the world, and the intraspecific variation in tannin concentrations along edaphic gradients suggests that tannins can affect nutrient cycles. This paper reviews nutrient dynamics in forest ecosystems in relation to tannins. Tannins comprise a complex class of organic compounds whose concentration and chemistry differ greatly both among and within plant species. Because the function and reactivity of tannins are strongly controlled by their chemical structure, the effects of tannins on forest ecosystem processes are expected to vary widely. Tannins can affect nutrient cycling by hindering decomposition rates, complexing proteins, inducing toxicity to microbial populations and inhibiting enzyme activities. As a result, tannins may reduce nutrient losses in infertile ecosystems and may alter N cycling to enhance the level of organic versus mineral N forms. The ecological consequences of elevated tannin levels may include allelopathic responses, changes in soil quality and reduced ecosystem productivity. These effects may alter or control successional pathways. While a great deal of research has addressed tannins and their role in nutrient dynamics, there are many facets of tannin biogeochemistry that are not known. This lack of information hinders a complete synthesis of tannin effects on forest ecosystem processes and nutrient cycling. Areas of study that would help clarify the role of tannins in forest ecosystems include improved characterization and quantification techniques, enhanced understanding of structure-activity relationships, investigation of the fate of tannins in soil, further determination of the influence of environmental factors on plant tannin production and decomposition, and additional information on the effects of tannins on soil organisms.     

Complementary pathways of dissolved organic carbon removal pathways in clear-water Amazonian ecosystems: photochemical degradation and bacterial uptake

Dissolved organic carbon (DOC) photochemical reactions establish important links between DOC and planktonic bacteria. We hypothesize that seasonal changes in DOC quality, related to the flood pulse, drive the effects of light-DOC interactions on uptake by planktonic bacteria uptake in clear-water Amazonian ecosystems. Water samples from two ecosystems (one lake and one stream) were incubated in sunlight during different hydrological periods and were then exposed to bacterial degradation. Photochemical and bacterial degradation were driven by seasonal DOC inputs. Bacterial mineralization was the main degradation pathway of autochthonous DOC in the lake, while allochthonous DOC was more available for photochemical oxidation. We suggest that sunlight enhances the bacterial uptake of refractory DOC but does not alter uptake of labile forms. We also observed a positive relationship between sunlight and bacterial degradation of DOC, instead of competition. We conclude that photochemical reactions and bacteria complementarily degrade the different sources of DOC during the flood pulse in Amazonian clear-water aquatic ecosystems.     

Seasonal patterns of ammonium and nitrate uptake in nine temperate forest ecosystems

Summary Seasonal patterns of net N mineralization and nitrification in the 0–10 cm mineral soil of 9 temperate forest sites were analyzed using approximately monthlyin situ soil incubations. Measured nitrification rates in incubated soils were found to be good estimates of nitrification in surrounding forest soils. Monthly net N mineralization rates and pools of ammonium-N in soil fluctuated during the growing season at all sites. Nitrate-N pools in soil were generally smaller than ammonium-N pools and monthly nitrification rates were less variable than net N mineralization rates. Nitrate supplied most of the N taken up annually by vegetation at 8 of the 9 sites. Furthermore, despite the large fluctuations in ammonium-N pools and monthly net N mineralization, nitrate was taken up at relatively uniform rates during the growing season at most sites.     

土壤溶解性有机碳在陆地生态系统碳循环中的作用

土壤溶解性有机碳(DOC)是有机碳库的活跃组分,在陆地生态系统碳循环中发挥重要作用.本文从碳循环重要性着手,综述了土壤DOC在土壤碳固持与温室气体排放中的作用;结合我国的现实情况(如土壤酸化、气候变暖等),探讨了土壤DOC的相关影响因素如土壤性质、环境因素、人为活动对土壤DOC的影响及作用机制,对进一步理解土壤DOC在陆地生态系统碳循环与温室气体减排中的作用具有重要意义.     

Experimental warming studies on tree species and forest ecosystems: a literature review

Temperature affects a cascade of ecological processes and functions of forests. With future higher global temperatures being inevitable it is critical to understand and predict how forest ecosystems and tree species will respond. This paper reviews experimental warming studies in boreal and temperate forests or tree species beyond the direct effects of higher temperature on plant ecophysiology by scaling up to forest level responses and considering the indirect effects of higher temperature. In direct response to higher temperature (1) leaves emerged earlier and senesced later, resulting in a longer growing season (2) the abundance of herbivorous insects increased and their performance was enhanced and (3) soil nitrogen mineralization and leaf litter decomposition were accelerated. Besides these generalizations across species, plant ecophysiological traits were highly species-specific. Moreover, we showed that the effect of temperature on photosynthesis is strongly dependent on the position of the leaf or plant within the forest (canopy or understory) and the time of the year. Indirect effects of higher temperature included among others higher carbon storage in trees due to increased soil nitrogen availability and changes in insect performance due to alterations in plant ecophysiological traits. Unfortunately only a few studies extrapolated results to forest ecosystem level and considered the indirect effects of higher temperature. Thus more intensive, long-term studies are needed to further confirm the emerging trends shown in this review. Experimental warming studies provide us with a useful tool to examine the cascade of ecological processes in forest ecosystems that will change with future higher temperature.     

Correlations between nitrate and sulfate in the soil solution of disturbed forest ecosystems

Based on data from three German forest ecosystems severely disturbed by windthrow events, correlation patterns between NO₃ ⁻ and SO₄ ²⁻ dynamics in the soil solution are described. Each of the correlation types was related to site-specific SO₄ ²⁻ retention processes. The relative importance of SO₄ ²⁻ adsorption/desorption and precipitation/dissolution was found to be different for the studied soils depending on their contents of SO₄ ²⁻ -adsorbing sesquioxides and of A1 hydroxy sulfate minerals. Enhanced NO₃ ⁻ concentrations in the soil solution resulting from excess nitrification promoted either SO₄ ²⁻ adsorption or the dissolution of Al hydroxy sulfates. Both processes result in different ecological consequences: Whereas the former reaction reduces anion concentration peaks in the soil solution, the latter increases them. Thus, a prediction of cation export from soil ecosystems subjected to excess nitrification has to regard site-specific interrelationships between NO₃ ⁻ and SO₄ ²⁻. As a third type of conelation the independence of NO₃ ⁻ and SO₄ ²⁻ concentrations in the soil solution is presented. This type is suggested to be typical for soils with low SO₄ ²⁻. adsorption capacity and absence of A1 hydroxy sulfates.     

Seasonal and diel relationships between the isotopic compositions of dissolved and particulate organic matter in freshwater ecosystems

A study of the isotopic composition of organic matter was conducted in a freshwater marsh over seasonal and diel time scales to determine the sources of dissolved organic matter (DOM) and the processes leading to its formation. Bulk C and N isotopic compositions of the bacterial fraction (0.2–0.7 m) and particulate organic matter (POM; 0.7–10 m) were compared on a seasonal basis with the change in ¹³C of DOM. The bulk isotopic data support the idea that DOM was, in part, derived from the breakdown of larger organic matter fractions. The bacterial fraction and POM were compositionally similar throughout the year, based on a comparison of the ¹³C of individual amino acids in each fraction. Annual variation in the ¹³C of amino acids in DOM was greater relative to the variation in larger fractions indicating that microbial reworking was an important factor determining the proteinaceous component of DOM. The ¹³C enrichment of serine and leucine in each organic matter fraction suggested microbial reworking was an important factor determining organic matter composition during the most productive times of year. Changes in the bulk ¹³C of DOM were more significant over daily, relative to seasonal, time scales where values ranged by 6 and followed changes in chlorophyll a concentrations. Although bulk ¹³C values for POM ranged only from –29 to –28 during the same diel period, the ¹³C of alanine in POM ranged from –30 to –22. Alanine is directly synthesized from pyruvate and is therefore a good metabolic indicator. The ¹³C of individual amino acids in DOM revealed the diel change in the importance of autotrophic versus heterotrophic activity in influencing DOM composition. Diel changes in the ¹³C of phenylalanine, synthesized by common pathways in phytoplankton and bacteria, were similar in both DOM and POM. The diel change in ¹³C of isoleucine and valine, synthesized through different pathways in phytoplankton and bacteria, were distinctly different in DOM versus POM. This disparity indicated a decoupling of the POM and DOM pools, which suggests a greater source of bacterial-derived organic matter at night. The results of this study demonstrate the use of the isotopic composition of individual amino acids in determining the importance of microbial reworking and autotrophic versus heterotrophic contributions to DOM over both diel and seasonal time scales.     

Tracing origins and migration of wildlife using stable isotopes: a review

To understand the ecology of migratory animals it is important to link geographic regions used by individuals including breeding, wintering, and intermediate stopover sites. Previous conventional approaches used to track animal movements have relied on extrinsic markers and typically the subsequent recovery of individuals. This approach has generally been inappropriate for most small, or non-game animals. The use of intrinsic markers such as fatty acid profiles, molecular DNA analyses, and the measurement of naturally occurring stable isotopes in animal tissues offer alternative approaches. This paper reviews the use of stable isotope analyses (primarily δ¹³C, δ¹⁵N, δ³⁴S, δD, δ⁸⁷Sr) to trace nutritional origin and migration in animals. This approach relies on the fact that foodweb isotopic signatures are reflected in the tissues of organisms and that such signatures can vary spatially based on a variety of biogeochemical processes. Organisms moving between isotopically distinct foodwebs can carry with them information on the location of previous feeding. Such an approach has been used to track animal use of inshore versus offshore, marine versus freshwater, terrestrial C₃ versus marine, terrestrial mesic versus xeric, and C₃ versus C₄ or Crassulacean acid metabolism foodwebs. More recently, the use of stable hydrogen isotope analyses (δD) to link organisms to broad geographic origin in North America is based on large-scale isotopic contours of growing-season average δD values in precipitation. This technique, especially when combined with the assay of other stable isotopes, will be extremely useful in helping to track migration and movement of a wide range of animals from insects to birds and mammals. Future research to refine our understanding of natural and anthropogenic-induced isotopic gradients in nature, and to explore the use of stable isotopes of other elements, is recommended. Received: 1 July 1998 / Accepted: 9 December 1998     

Influence of land use history on seed banks in European temperate forest ecosystems: a review

This study summarises European research on seed banks in temperate forest systems and analyses for differences in seed bank composition between geographically scattered forests with a different land use history. Special attention is given to seed bank characteristics of ancient forest species. Results of Detrended Correspondence Analysis suggest that historical land use is a key factor in determining the seed bank composition. Particularly seed banks of forests on former heathland sites differ from seed banks of ancient forest due to a high contribution of early successional species. The effect of former land use decreases after 50 yr, due to seed senescence. Total seed density decreases with recent forest age. Seed bank composition of eastern European forests is different from northern or western European forests, a difference which is mainly caused by species with a higher Ellenberg indicator value for continentality, temperature and reaction. In general, ancient forest species are poorly represented. Only a limited number is mentioned to have a persistent seed bank, and their densities are relatively low, which means that restoration of typical ancient forest vegetation can not rely on the seed bank. However, there is still a considerable lack of knowledge concerning seed bank and germination characteristics of forest species.     

Estimating carbon carrying capacity in natural forest ecosystems across heterogeneous landscapes: addressing sources of error

Evaluating contributions of forest ecosystems to climate change mitigation requires well‐calibrated carbon cycle models with quantified baseline carbon stocks. An appropriate baseline for carbon accounting of natural forests at landscape scales is carbon carrying capacity (CCC); defined as the mass of carbon stored in an ecosystem under prevailing environmental conditions and natural disturbance regimes but excluding anthropogenic disturbance. Carbon models require empirical measurements for input and calibration, such as net primary production (NPP) and total ecosystem carbon stock (equivalent to CCC at equilibrium). We sought to improve model calibration by addressing three sources of errors that cause uncertainty in carbon accounting across heterogeneous landscapes: (1) data‐model representation, (2) data‐object representation, (3) up‐scaling. We derived spatially explicit empirical models based on environmental variables across landscape scales to estimate NPP (based on a synthesis of global site data of NPP and gross primary productivity, n=27), and CCC (based on site data of carbon stocks in natural eucalypt forests of southeast Australia, n=284). The models significantly improved predictions, each accounting for 51% of the variance. Our methods to reduce uncertainty in baseline carbon stocks, such as using appropriate calibration data from sites with minimal human disturbance, measurements of large trees and incorporating environmental variability across the landscape, have generic application to other regions and ecosystem types. These analyses resulted in forest CCC in southeast Australia (mean total biomass of 360 t C ha^?1, with cool moist temperate forests up to 1000 t C ha^?1) that are larger than estimates from other national and international (average biome 202 t C ha^?1) carbon accounting systems. Reducing uncertainty in estimates of carbon stocks in natural forests is important to allow accurate accounting for losses of carbon due to human activities and sequestration of carbon by forest growth.     

Using a nitrogen and oxygen isotopic approach to identify nitrate sources and cycling in the Wei River of northwestern China

The Wei River is the largest tributary of the Yellow River in China. To understand the sources and cycling of nitrate in the Wei River, we determined the concentrations and nitrogen and oxygen isotopic values of nitrate from water samples. Our results revealed that NO₃^?-N dominated the inorganic N and ranged from 0.1 to 8.8 mg/L (averaging 3.3 mg/L). Although this NO₃^?-N concentration does not exceed the World Health Organization's drinking water standard of 10 mg/L, the NO₃^?-N content of most water samples exceeded 3 mg/L, indicating poor water quality. The NO₃^?-N concentrations and δ¹⁵N-NO₃^? values demonstrate that there are significant differences in the spatial distribution of nitrogen between the tributaries and the main stream of the Wei River. In addition, a negative linear relationship (r² = 0.63) between NO₃^?-N concentrations and δ¹⁸O-NO₃^? values suggests mixing between two distinct sources (fertilizer and manure or sewage). Furthermore, we infer that the main source of nitrate is not manure or sewage itself, but rather the nitrification of NH₄⁺ in manure and sewage. Finally, no obvious denitrification processes were observed. These results expand our understanding of sewage as a major source of nitrate to the Wei River, emphasizing the role of nitrification.     

High-resolution profiles of temperature and dissolved oxygen in a river

Longitudinal profiles of water quality along a well-mixed tidal river are, ideally, based on simultaneous measurements at fixed stations distributed along the river. The resolution of the profiles is limited by the density of the stations. However, for a given number of stations the resolution is greatly increased if water quality date can be extrapolated upstream and downstream of the stations, making use of velocity data; the resolution is then determined by the density of the extrapolated data points, which may be an order of magnitude higher than the density of the stations. A 15-km length of river was investigated using 5 current meters equipped to measure depth, temperature, conductivity and dissolved oxygen. Data were recorded simultaneously every 10 minutes. When the average cross-sectional speed was 0.25 ms⁻¹ (typical of tidal conditions), the extrapolated data points were 150 m apart, so the resolution of the resulting profiles (7 per kilometre) was much higher than that of the stations alone (0.3 per kilometre). The extrapolation process required a means of deducing the average cross-sectional speed from the speed measured at a given station. The key to this was provided by temperature data recorded during the onset of a spate, when tidal flow was suspended and the average cross-sectional speed was uniformly about 0.75 ms ⁻¹ at four of the stations. Profiles of temperature and dissolved oxygen were generated by this method; the resolution was about 2 data points km⁻¹ during the onset of the spate, and 6 points km⁻¹ during tidal flow.     

Implications of seasonal variation in nitrate export from forested ecosystems: a review from the hydrological perspective of ecosystem dynamics

In recent decades, the seasonal variation in NO₃ ^? discharge from forest ecosystems has been used increasingly by ecologists and hydrologists as a diagnostic indicator of the nutrient status of ecosystems. Major factors underlying the seasonal patterns of stream NO₃ ^? concentration include seasonal variations in (1) ecosystem nutrient demand, (2) solute transport capability of the hydrological condition, and (3) in-stream nutrient usage and supply. In this article I show how case studies have helped elucidate the dominant controlling factors by comparing data from Japanese catchments with previously compiled data from studies in North America and Europe. Moreover, I explain the different influences that hydrological and biogeochemical controls exert in regions with rainy (Japan) and dry (northeastern United States and Europe) summers. The seasonal variation in hydrological conditions is the predominant controlling factor in Japanese forests, whereas nutrient demand may predominate in the northeastern United States and Europe. I emphasize the importance of comparing seasonal patterns among regions with differing climates to obtain more universal explanations of seasonal variations in NO₃ ^?-related biogeochemical and hydrological dynamics in a forest ecosystem. In addition, multi-scale investigations will be needed to provide insight into the relative contributions of hillslope biogeochemical effects and in-stream biological activities.     

Phytoplankton production in subarctic lake and river ecosystems: development of a photosynthesis-temperature-irradiance model

We investigated the size-dependent temperature response of naturalphytoplankton communities from a lake and a river in the Canadiansubarctic. Photosynthesis by total, <2 m and >2 µmsize fractions was determined at 11 irradiances (1–109%of ambient solar radiation) and five temperatures (5–25C)in outdoor solar incubators. Temperature had no effect on photosynthesisat low irradiance, but strongly regulated the photosyntheticresponse at saturating and inhibiting irradiances. For the riverphytoplankton, low temperatures lowered EK values (onset oflight saturation) and shifted photosynthesis in the water columnfrom light dependence to temperature depend ence. A photosynthesis-temperature-irradiance(P-T-E) model was developed to describe the varied temperatureresponse of photosynthesis across the full range of limiting,saturating and inhibiting irra diances. The P-T-E model explained74–95% of the variation in photosynthesis for all sizefractions (total community, >2 µ fraction and <2µm fraction). Picoplankton (<2 µm) had greaterphotosyn thetic rates (P_max) at all temperatures than did thetotaland >2 µm communities. The picoplankton fraction wasalso more responsive to increasing temperature than larger cells,implying a greater sensitivity to diurnal or longer term changesin lake water temperature.