Mericarp morphology and its systematic implications for the genus Salvia L. section Hymenosphace Benth. (Lamiaceae) in Turkey

Mericarp morphology of 15 taxa of Salvia L. section Hymenosphace Benth. in Turkey were investigated by light microscopy (LM) and scanning electron microscopy (SEM) to evaluate the utility of mericarp characters in systematic studies. Mericarps ranged from 2.50 to 5.38?mm in length and 2.04 to 4.70?mm in width. Mericarp shape was prolate-spheroid or near spherical with a length-to-width ratio of 1.02?C1.48. Transverse sections of the mericarps were rounded or rounded-trigonous. Mericarp surfaces presented colliculate, reticulate, verrucate or foveate sculpturing patterns, mostly as a result of the sculpturing of the exocarp cell walls with the pattern determined by whether the periclinal walls were concave or convex and whether the anticlinal walls were raised or sunken. Colliculate surface sculpturing (periclinal walls convex) was the most common among the taxa examined. The variation in the nature of surface sculpturing, mericarp shape and size, exocarp cell shape, nature of transverse sections and abscission scar diameter proved useful diagnostic characters. Variation was sufficient to distinguish taxa at species level, including morphologically similar species. Data provided here are also relevant to phylogenetic questions at higher levels within Salvia.     

Three groups of species in Petunia sensu Jussieu (Solanaceae) inferred from the intact seed

The intact seed surface morphology in 45 taxa of Petunia sensu Jussieu native to South America (Petunia sensu Wijsman plus Calibrachoa) was compared under scanning electron microscopy. The existence of three groups of species, differentiated in terms of seed morphology, was revealed as follows: (1) all species of Petunia sensu Wijsman, having coarse wavy middle lamellae and anticlinal walls; (2) Calibrachoa parviflora and C. pygmaea, having fine wavy middle lamellae embedded in straight anticlinal walls; and (3) the other species of Calibrachoa, having straight middle lamellae and anticlinal walls. Close relationships between seed morphology and the other characteristics observable in the groups of species are discussed.     

光、温限制后铜绿微囊藻和斜生栅藻的超补偿生长与竞争效应

研究了铜绿微囊藻(Microcystis aeruginosa)和斜生栅藻(Scenedesmus obliquus)低温和低光照限制后的超补偿效应,以及共培养条件下的竞争效应。结果表明,低温和低光照均显著抑制微藻的生长发育,但低温对铜绿微囊藻的抑制效应更强,而斜生栅藻则对低光胁迫更敏感。经过低光和低温培养后,铜绿微囊藻和斜生栅藻在恢复正常培养时藻细胞密度短期内都表现出超补偿增长效应,但不同藻类超补偿模式不同,斜生栅藻补偿生长时间不超过1周,而铜绿微囊藻的补偿效应可以持续10天;此外,统计结果表明铜绿微囊藻细胞密度对低温限制解除表现出更显著的补偿生长,斜生栅藻则在低光解除后表现出更强的超补偿效应。微藻叶绿素a指标在光恢复条件下都表现出显著的补偿效应,但温度恢复过程中叶绿素a含量与藻密度增长不同步,低温胁迫对恢复正常培养后微藻叶绿素a的形成产生了一定的负效应;铜绿微囊藻产毒株(912)在两种恢复模式下脱氢酶活性显著高于对照,产毒株(912)脱氢酶活性的补偿响应明显高于其它两种材料。共培养实验结果表明斜生栅藻同铜绿微囊藻产毒株(912)相比处于竞争劣势,而在同无毒株(469)的共培实验中,尽管连续正常培养情况下两者竞争能力差异不显著,但在恢复培养条件下斜生栅藻竞争能力显著高于后者。因此产毒型铜绿微囊藻低温和低光后的补偿生长效应以及对斜生栅藻的竞争优势可能是蓝藻爆发的内源性机制之一。     

Variability in natural behaviour, and observed reactions to an ROV, by mid-slope fish species

The behaviour of eight large benthopelagic fish taxa was analysed using video records collected with an ROV on the mid-slope of the Bay of Biscay. The studied species were roundnose grenadier (Coryphaenoides rupestris), orange roughy (Hoplostethus atlanticus), deep-sea scorpionfish (Trachyscorpia cristulata echinata), and black scabbardfish (Aphanopus carbo), as well as individuals belonging to the families Alepocephalidae, Chimaeridae, and Scyliorhinidae, and to the order Squaliformes. Some of the observed fish were grouped at the family taxonomical level due to visual identification to species being unreliable. Assumed natural (undisturbed) behaviour was categorised in terms of (i) body position with respect to the bottom sea floor, (ii) locomotion and (iii) activity type. Reaction (disturbed) behaviour to the approaching ROV was categorised in terms of reaction type and distance. Environmental conditions (depth, temperature, current speed and direction) and observation conditions (ROV speed and altitude) were recorded simultaneously with fish observations in order to explain the variability in the observed reaction behaviour. A multivariate analysis identified three groups corresponding to a behaviour pattern of a sit and wait strategist (one species), an active bottom hunter (three taxa), and a group of species displaying little activity in their bottom habitat (three taxa). At species level the environmental and observation conditions had some explanatory power for individual behaviour variability. It is hypothesised that the varied behaviour of mid-slope benthopelagic fish contributes to maintain a high species diversity of large predators in an energy poor environment.     

Genotypic and Phenotypic Diversity of Cyanobacteria in Biological Soil Crusts of the Succulent Karoo and Nama Karoo of Southern Africa

Biological soil crusts (BSCs) are communities of cryptogamic organisms, occurring in arid and semiarid regions all over the world. Based on both morphological identification and genetic analyses, we established a first cyanobacterial inventory using the biphasic approach for BSCs within two major biomes of southern Africa. The samples were collected at two different sites in the Succulent Karoo and one in the Nama Karoo. After cultivation and morphological identification, the 16S rRNA gene was sequenced from the cyanobacterial cultures. From the soil samples, the DNA was extracted, and the 16S rRNA gene sequenced. All the sequences of the clone libraries from soil and cultures were compared with those of the public databases. Forty-five different species were morphologically identified in the samples of the Succulent Karoo (observatories of Soebatsfontein and Goedehoop). Based on the genetic analyses, 60 operational taxonomic units (OTUs) were identified for the Succulent Karoo and 43 for the Nama Karoo (based on 95 % sequence similarity). The cloned sequences corresponded well with the morphologically described taxa in cultures and sequences in the public databases. Besides known species of typical crust-forming cyanobacterial genera (Microcoleus, Phormidium, Tolypothrix and Scytonema), we found sequences of so far undescribed species of the genera Leptolyngbya, Pseudanabaena, Phormidium, Oscillatoria, Schizothrix and Microcoleus. Most OTUs were restricted to distinct sites. Grazed soils showed lower taxa numbers than undisturbed soils, implying the presence of early successional crust types and reduced soil surface protection. Our combined approach of morphological identification and genetic analyses allowed both a taxa inventory and the analysis of species occurring under specific habitat conditions.     

Examination of host-taxon,environment, and distance effects on leaf fungal endophytes in the dominant woody genus,Metrosideros, on Oʻahu

Fungal endophyte (FE) communities can be shaped by environmental conditions and/or host-plant affinities. Hawaiʻi's landscape-dominant woody genus Metrosideros (Myrtaceae) comprises several vegetatively distinct taxa that are non-randomly distributed across environments, and their FE communities are poorly known. We examined the relative importance of Metrosideros taxon and environment (elevation) on FE communities on Oʻahu. ITS1 rDNA barcoding and sequencing of 113 trees detected a richness of 1,637 FEs representing 5 phyla, 223 genera, and 200 species. Variation in FE diversity was significantly explained by host taxon and site with considerable overlap in FE communities among taxa. FE communities did not vary between pubescent and glabrous taxa or across elevations, possibly due to the relatively narrow range of environmental conditions represented on Oʻahu relative to taller islands. A significant pattern of isolation by distance in FE composition was detected both among and within sites, consistent with restricted dispersal of FEs across the island.     

Should ecomorphs be conserved? The case of Nostoc flagelliforme,an endangered extremophile cyanobacteria

Nostoc flagelliforme has been reported from deserts of all continents and more recently from semiarid environments in south-east Spain and Australia. Its cylindrical thalli are very conspicuous on soils after rains and can be easily differentiated from other taxa and it is considered endangered in some countries, e. g. China. It was firstly described as variety flagelliforme of Nostoc commune but later was considered a separate species. The morphology, fine structure and ecology of populations of both taxa from Australia and different regions of Spain were studied and 16S rRNA and trnL^Leu (UAA) genes were sequenced to identify their intraspecific genetic variation. The morphological study revealed the presence of several intermediate morphs, from spheres and sheets to ribbons followed by the cylindrical thalli and the overlapping of cell dimensions, permitting the differentiation of cylindrical morphs from the others. The molecular data did not allow for a distinction between N. commune and N. flagelliforme which is clearly polyphyletic and both show a high genetic diversity. The presence of cylindrical thalli seems to be related to extreme conditions of aridity, usually on soils but occasionally on rock walls. The ecotype that N. flagelliforme represents deserves to be protected for itself and for the evolutionary process it represents opening up the possibility of implementation of recovery measures and even opportunities to explore its biotechnological production from a different point of view.     

Impact of the invasive moss Campylopus introflexus on carabid beetles (Coleoptera: Carabidae) and spiders (Araneae) in acidic coastal dunes at the southern Baltic Sea

Campylopus introflexus is an invasive moss in Europe and North America that is adapted to acidic and nutrient-poor sandy soils with sparse vegetation. In habitats like acidic coastal dunes (grey dunes) it can reach high densities, build dense carpets and modify habitat conditions. While the impact of the moss invasion on the vegetation is well analyzed, there is a lack of knowledge regarding possible effects on arthropods. In the present study we analyzed the impact of Campylopus introflexus on the ground-dwelling arthropods carabid beetles and spiders, as both taxa are known to be useful indicator taxa even on a small-scale level. In 2009 we compared species composition in a) invaded, moss-rich (C. introflexus) and b) native, lichen-rich (Cladonia spp.) acidic coastal dunes by using pitfall traps. A total of 1,846 carabid beetles (39 species) and 2,682 spiders (66 species) were caught. Species richness of both taxa and activity densities of spiders were lower in invaded sites. Species assemblages of carabids and spiders differed clearly between the two habitat types and single species were displaced by the moss encroachment. Phytophagous carabid beetles, web-building spiders and wolf spiders were more abundant in native, lichen-rich sites. Shifts in species composition can be explained by differences in the vegetation structure, microclimate conditions and most likely a reduced food supply in invaded sites. By forming dense carpets and covering large areas, the moss invasion strongly alters typical arthropod assemblages of endangered and protected (EU-directive) acidic coastal dunes.     

Cell wall organic matrix composition and biomineralization across reef-building coralline algae under global change

Crustose coralline algae (CCA) are one of the most important benthic substrate consolidators on coral reefs through their ability to deposit calcium carbonate on an organic matrix in their cell walls. Discrete polysaccharides have been recognized for their role in biomineralization, yet little is known about the carbohydrate composition of organic matrices across CCA taxa and whether they have the capacity to modulate their organic matrix constituents amidst environmental change, particularly the threats of ocean acidification (OA) and warming. We simulated elevated pCO₂ and temperature (IPCC RCP 8.5) and subjected four mid-shelf Great Barrier Reef species of CCA to 2 months of experimentation. To assess the variability in surficial monosaccharide composition and biomineralization across species and treatments, we determined the monosaccharide composition of the polysaccharides present in the cell walls of surficial algal tissue and quantified calcification. Our results revealed dissimilarity among species' monosaccharide constituents, which suggests that organic matrices are composed of different polysaccharides across CCA taxa. We also observed that species differentially modulate composition in response to ocean acidification and warming. Our findings suggest that both variability in composition and ability to modulate monosaccharide abundance may play a crucial role in surficial biomineralization dynamics under the stress of OA and global warming.     

Ectomycorrhizal fungal communities of Quercus liaotungensis along local slopes in the temperate oak forests on the Loess Plateau, China

Topographic factors strongly affect the diversity of plants and local environmental conditions, yet little is known about their effects on the distribution of ectomycorrhizal fungi (EMF). By combining morphological and molecular identification methods, we investigated the relationship between EMF communities of Quercus liaotungensis and topographic factors along local slopes in the temperate oak forest on the Loess Plateau of northwest China. ITS-RFLP analysis revealed a high diversity of EMF taxa (135 taxa) associated with Q. liaotungensis along three local slopes. EMF communities among slope sites or slope positions, tended to share major common EMF species, which accounted for more than 80 % of the total EMF abundance, and showed a diverse distribution, which mainly related to rare species. Ordination analyses showed that EMF taxa distribution was significantly correlated with several environmental variables (slope site, slope position, slope gradient, and soil C:N). Topography-mediated changes of environmental conditions may be important determinants of the distribution of EMF taxa along local slopes (slope position and slope site) in the central Loess Plateau.     

Levels of seed proteins in Citrullus and Praecitrullus accessions

Variation among 17 accessions of Citrullus lanatus from different geographic regions and interspecific relationships of six taxa of Citrullus and Praecitrullus were studied using electrophoretic patterns of their seed storage proteins. Globulins, the salt soluble proteins, represented the major fraction with their proportion varying between 56.6% and 67.0%. These were followed by albumins (16.6–20.8%) and glutelins (13.5–18.5%) with prolamins as the lowest (2.2–4.1%) of the four fractions. Two-dimensional gel electrophoresis under nonreducing conditions in the first dimension and reducing conditions in the second revealed disulphide-bonded subunit pairs of molecular weight 53, 52, 50 and 41 kDa, unlike the single subunit pair generally reported in different cucurbits, each consisting of a large and a small subunit. In the UPGMA dendrogram based on polypeptide patterns, the occurrence of C. lanatus var. lanatus, C. lanatus var. citroides and C. lanatus accession PI 482318 in one subcluster suggested that phylogenetically C. lanatus var. citroides and C. lanatus var. lanatus are closely related. The recently described annual wild species, Citrullus rehmii, occurred independently nearest to the subcluster of these cultivated and wild taxa. Citrullus colocynthis, the perennial wild species occurred farther from this cluster showing relatively more genetic distance from the watermelons. Praecitrullus fistulosus was outclustered and appeared genetically distant from all the Citrullus taxa; this supported its placement in a separate genus unlike its nomenclature as a botanical variety of watermelon or as a separate species of Citrullus proposed in certain earlier studies.     

Major vegetation trends in the Tertiary of Patagonia (Argentina): A qualitative paleoclimatic approach based on palynological evidence

The patterns of Patagonian vegetation change suggest a strong relationship between the major thermal characters of the flora and the global paleoclimatic trends during Tertiary times. This conclusion was reached from the assessment of fossil pollen data from Patagonia throughout the Paleogene and Early Neogene periods and the subsequent comparison of palynological data to the global deep-sea oxygen isotope record. Four main time intervals were recognized based on the temporal distribution of selected angiosperm key taxa. (1) Paleocene to Early Eocene: presence of megatherm elements (e.g. Nypa, Pandanus), probably integrating mangrove communities in Patagonian lowlands. (2) Middle Eocene to Early Oligocene: rise to dominance of mesotherm and microtherm Nothofagus species. Megatherm taxa were well recorded at the beginning of this interval (e.g. Ilex) but were shown to disappear towards the end. (3) Late Oligocene to Middle Miocene: new increases of megatherm taxa such as palms, Cupania and Alchornea. First occurrences of mesotherm Asteraceae, represented by trailing Mutisieae, were reported. (4) Late Miocene: dispersal of meso-microtherm and arid adapted taxa (e.g. Ephedraceae and Asteraceae) across the non-Andean region of Patagonia. Microtherm Nothofagacean forests probably occurred on the higher rainfall regions of western Patagonia. The current vegetation was most likely reached during this last stage with the forest development under wetter conditions on the Andean sectors, and the steppe throughout the non-Andean region of Patagonia.     

Utilization of dissolved organic phosphorus by different groups of phytoplankton taxa

The utilization of nine dissolved organic phosphorus (DOP) compounds by five bloom-causing phytoplankton species was studied under batch culture conditions. The DOP compounds included were adenosine 5-triphosphate (ATP), adenosine 5-monophosphate (AMP), cytidine 5-monophosphate (CMP), guanosine 5-monophosphate (GMP), uridine 5-monophosphate (UMP), glucose-6-phosphate (G6P), sodium glycerophosphate (GYP), 4-nitrophenyl phosphate (NPP), and triethyl phosphate (TEP), and the phytoplankton taxa were Skeletonema costatum, Prorocentrum micans, Alexandrium tamarense, Chattonella marina, and Heterosigma akashiwo. The four flagellate taxa, P. micans, A. tamarense, C. marina, and H. akashiwo, grew well under various DOP regimes. P. micans and C. marina were the most capable of using DOP compounds, sustaining better growth on a majority of nucleotides (ATP, AMP, CMP, GMP, and UMP) and phosphomonoesters (G6P and GYP) than in inorganic phosphorus (P) controls. A. tamarense and H. akashiwo showed equivalent growth in most organic and inorganic P cultures, while the diatom species, S. costatum, could only utilize AMP and GMP. Furthermore, A. tamarense and C. marina could endure N, P-depleted conditions. Among the nine DOP compounds tested, the nucleotide compounds had the highest nutritional value for algal cell growth, while TEP could not sustain growth as the sole source of P. These results suggest that enhanced DOP utilization and the endurance of nutrient-limitation by harmful flagellate taxa offer their competitive advantages, which may account for the frequent occurrence of their blooms in coastal waters.     

The composition and zonation of a Fucus serratus community in strangford lough,co. down

The flora and fauna associated with the serrated wrack, Fucus serratus L., in Strangford Lough have been studied. Fucus plants were larger where they were most abundant and their distribution was determined largely by the availability of suitable substratum; however, plant size was reduced under turbulent conditions. The fauna contained 79 taxa, of which eleven were common: these comprised four polyzoans, two tunicates, two sponges, two hydroids and a serpulid. All except three were more abundant on plants with low silt loads in turbulent, weedy areas. All species except Electra pilosa (L.) tended to occur on the concave surfaces of the plant. Evidence of zonation in each species' distribution along the plants was obtained. Analysis of association coefficients for the commonest species suggested that there are two distinct species groupings within the community.     

Checklist of fauna found in zooplankton samples from the Barents Sea

We present a list of zooplankton taxa occurring in the Barents Sea based on our analysis of 360 samples from the upper 100 m of the water column as well as on reports from published sources. Moreover, we provide information on adult size, ecological and geographical distribution, habitat preference and frequency of occurrence of each taxon. The list encompasses a total of 374 species and higher taxa. Most are mesozooplankton, with Copepoda prevailing (153 species), and belong to the holoplankton. However, pseudoplankton, organisms only circumstantially occurring in the water column, also comprise a significant part of the fauna (86 taxa). The coastal zooplankton (264 neritic species) was richer than the fauna of the open sea. In our samples, the majority of the zooplankton taxa were rarely found (94 of 157 taxa, equivalent of 60%), 46 taxa (29%) were moderate and only 17 taxa (11%) were common (found in >80% of the samples). Among these, the copepods Calanus finmarchicus, C. glacialis, Oithona similis and Pseudocalanus minutus were most frequent.     

Global Wild Annual Lens Collection: A Potential Resource for Lentil Genetic Base Broadening and Yield Enhancement

Crop wild relatives (CWRs) are invaluable gene sources for various traits of interest, yet these potential resources are themselves increasingly threatened by the impact of climate change as well as other anthropogenic and socio-economic factors. The prime goal of our research was to cover all aspects of wild Lens genetic resource management like species characterization, agro-morphological evaluation, diversity assessment, and development of representative sets for its enhanced utilization in lentil base broadening and yield improvement initiatives. We characterized and evaluated extensively, the global wild annual Lens taxa, originating from twenty seven counties under two agro-climatic conditions of India consecutively for three cropping seasons. Results on various qualitative and quantitative characters including two foliar diseases showed wide variations for almost all yield attributing traits including multiple disease resistance in the wild species, L. nigricans and L. ervoides accessions. The core set developed from the entire Lens taxa had maximum representation from Turkey and Syria, indicating rich diversity in accessions originating from these regions. Diversity analysis also indicated wide geographical variations across genepool as was reflected in the core set. Potential use of core set, as an initial starting material, for genetic base broadening of cultivated lentil was also suggested.     

Molecular differentiation of Chenopodium album complex and some related species using ISSR profiles and ITS sequences

The present study was undertaken to understand the genetic differentiation and relationships in various components of C. album complex, C. giganteum and some related species using inter simple sequence repeats (ISSR) profiles and internal transcribed spacer (ITS) sequences. The relationships based on UPGMA dendrograms have shown the heterogenous nature of C. album complex. The 2x taxa while showing close relation among themselves are sharply segregated from 4x and 6x taxa belonging to C. album and C. giganteum. Among the three cytotypes from North Indian plains the 4x shows greater similarity to 6x than to 2x which is corroborated by the karyotypic studies. Furthermore, the 6x C. album and C. giganteum accessions of American and European origin are clearly segregated from those of Indian origin which may show their separate origin. Other related species show relationships according to their taxonomic position. The present study based on ISSR profiles and ITS sequences has therefore been very useful in explaining the relationships between various components of C. album complex and related species. However, more work needs to be done using different CpDNA loci to define correct species boundary of the taxa under C. album complex from Himalayas and North Indian Plains.     

Pollen morphology of Carthamus L. species in Anatolian flora

In flora of Turkey, there are six species of Carthamus L: Carthamus dentatus (Forssk.) Vahl., C. glaucus M. Bieb. subsp. glaucus, C. lanatus L., C. tenuis (Boiss. & Blanche) Bornm., C. persicus Desf. ex Willd. and C. tinctorius L. Within these species, C. tinctorius L. is an alien species for the Turkish flora. The pollen grains belonging to six taxa collected from different locations of Anatolia and examined both under light microscope (LM) and under scanning electron microscope (SEM). As a result of these examinations and measurements, pollen grains of taxa are radially symmetrical, isopolar, oblate-spheroid, spheroid, tricolporate rarely tetracolporate, echinate. There are high similarities among taxa but some differences are recorded in size and spin length. According to cluster analyses of Carthamus species’ pollens, C. glaucus and C. tenuis have the most similar pollens. C. dentatus grouped with these two. C. persicus placed as the closest relative of C. tinctorius in the dendrogram.     

Vertical distribution of chitons (Mollusca: Polyplacophora) in the rocky intertidal zone of central Chile

The patterns of vertical distribution of chitons in various exposed rocky shore habitats of central Chile are described. The density and size of the individuals were determined at different levels on intertidal rock walls, in pools and on boulders. A group of four species was found on rock walls while another group of four species was found in tidal pools and on boulders. The species showed vertical separation on rock walls and segregation according to a range of increasing frequency of water movement in pools and on boulders. Only the two species with largest adult individuals (Acanthopleura echinata (Barnes) and Chitonlatus Sowerby) showed vertical segregation in size. Small-sized species and small individuals of large-sized species were found higher on rock walls or in zones where water movement is less; large chitons occur in zones of greatest water impact. This suggests that water movement may be a significant factor in setting the lower limits of distribution of these herbivores. Some of the species examined were extremely abundant (600·m^-2) with densities of one to two orders of magnitude greater than for other chiton species elsewhere.