Genotoxic evaluation in two amphibian species from Brazilian subtropical wetlands

Biomarkers analysis serves as an early warning system for the presence of pollutants because their responses appear before irreversible damage to the ecosystem takes place. The genotoxic effects of pollutants may occur at cellular pollutant concentrations that are well below levels that would cause gross cytotoxicity, making this a useful tool to detect early effects of toxic environmental agents. Combining the importance of Brazilian wetlands to the conservation of amphibian biodiversity with the potential negative impacts of irrigated rice fields in the surrounding areas, the aim of the present study was to evaluate genotoxic damage in two amphibian species, Pseudis minuta, and Leptodactylus gr latrans, from the southern Brazilian wetlands. Adult specimens from both Anuran species were captured from preserved (Taim Ecological Station = TAIM) and non-preserved (Senandes) wetlands. Nuclear abnormalities were quantified in erythrocytes, and the results were compared using the Mann–Whitney U test. There was a higher incidence of micronucleated erythrocytes in P. minuta, and of notched nuclei in L. gr latrans that were collected in TAIM when compared to those that were collected in Senandes, despite the fact that TAIM is a conservation unit. These findings indicate that Anurans are coping with genotoxic substances in their habitats, and underscore the need to implement monitoring programs in TAIM to determine which compounds or mixtures might be causing cell damage and to investigate the effects of such compounds on other anuran species and animal groups.     

Killing kinetics of anidulafungin,caspofungin and micafungin against Candida parapsilosis species complex: Evaluation of the fungicidal activity

Background

Candida parapsilosis, Candida metapsilosis and Candida orthopsilosis are emerging as relevant causes of candidemia. Moreover, they show differences in their antifungal susceptibility and virulence. The echinocandins are different in terms of in vitro antifungal activity against Candida. Time-kill (TK) curves represent an excellent approach to evaluate the fungicidal activity of antifungal drugs.

A new genotype of Cryptosporidium from giant panda (Ailuropoda melanoleuca) in China

Fifty-seven fecal samples were collected from giant pandas (Ailuropoda melanoleuca) in the China Conservation and Research Centre for the Giant Panda (CCRCGP) in Sichuan and examined for Cryptosporidium oocysts by Sheather's sugar flotation technique. An 18-year-old male giant panda was Cryptosporidium positive, with oocysts of an average size of 4.60 × 3.99 μm (n = 50). The isolate was genetically analyzed using the partial 18S rRNA, 70 kDa heat shock protein (HSP70), Cryptosporidium oocyst wall protein (COWP) and actin genes. Multi-locus genetic characterization indicated that the present isolate was different from known Cryptosporidium species and genotypes. The closest relative was the Cryptosporidium bear genotype, with 11, 10, and 6 nucleotide differences in the 18S rRNA, HSP70, and actin genes, respectively. Significant differences were also observed in the COWP gene compared to Cryptosporidium mongoose genotype. The homology to the bear genotype at the 18S rRNA locus was 98.6%, which is comparable to that between Cryptosporidium parvum and Cryptosporidium hominis (99.2%), or between Cryptosporidium muris and Cryptosporidium andersoni (99.4%). Therefore, the Cryptosporidium in giant pandas in this study is considered as a new genotype: the Cryptosporidium giant panda genotype.     

Characterization of d-amino acid aminotransferase from Lactobacillus salivarius

We searched a UniProt database of lactic acid bacteria in an effort to identify d-amino acid metabolizing enzymes other than alanine racemase. We found a d-amino acid aminotransferase (d-AAT) homologous gene (UniProt ID: Q1WRM6) in the genome of Lactobacillus salivarius. The gene was then expressed in Escherichia coli, and its product exhibited transaminase activity between d-alanine and α-ketoglutarate. This is the first characterization of a d-AAT from a lactic acid bacterium. L. salivarius d-AAT is a homodimer that uses pyridoxal-5′-phosphate (PLP) as a cofactor; it contains 0.91 molecules of PLP per subunit. Maximum activity was seen at a temperature of 60 °C and a pH of 6.0. However, the enzyme lost no activity when incubated for 30 min at 30 °C and pH 5.5 to 9.5, and retained half its activity when incubated at pH 4.5 or 11.0 under the same conditions. Double reciprocal plots of the initial velocity and d-alanine concentrations in the presence of several fixed concentrations of α-ketoglutarate gave a series of parallel lines, which is consistent with a Ping-Pong mechanism. The K_m values for d-alanine and α-ketoglutarate were 1.05 and 3.78 mM, respectively. With this enzyme, d-allo-isoleucine exhibited greater relative activity than d-alanine as the amino donor, while α-ketobutylate, glyoxylate and indole-3-pyruvate were all more preferable amino acceptors than α-ketoglutarate. The substrate specificity of L. salivarius d-AAT thus differs greatly from those of the other d-AATs so far reported.     

Flexible chain conformation of (1 → 3)-β-d-glucan from Poria cocos sclerotium in NaOH/urea aqueous solution

A water-insoluble polysaccharide (PCS3-II) extracted from sclerotium of Poria cocos was identified as a linear (1 → 3)-β-d-glucan by ¹³C NMR and gas chromatography. Aqueous 0.5 M NaOH/0.2 M urea was a good solvent for PCS3-II and the dependence of intrinsic viscosity ([η]) on weight-average molecular weight (M_w) was established in the M_w range from 7.68 × 10⁴ to 5.14 × 10⁵ to be [η] = 3.39 × 10^?2 $M_{\text{W}}^{0.62}{\text{cm}}^3{\text{g}}^{-1}$ at 25 °C by using laser light scattering and viscometry. The chain conformation parameters of PCS3-II in the 0.5 M NaOH/0.2 M urea solution was 2.3 (± 0.3) nm for persistence length (q), 580 g mol^?1 nm^?1 for molar mass per unit contour length (M_L), 0.8 (± 0.2) nm for the diameter of the chain (d) and 3.63 for limited characteristic ratio (C_∞). The results revealed, for the first time, that PCS3-II existed as a flexible chain in 0.5 M NaOH/0.2 M urea aqueous solution.     

Shrinking factors of hyperbranched polysaccharide from fungus

The branched structure properties of hyperbranched polysaccharides (TM3a and TM3b), extracted from sclerotia of Pleurotus tuber-regium, were studied by using laser light scattering and viscometry. The configurational shrinking factor (g) and viscometric shrinking factor (g′) of TM3a and TM3b were discussed, where curdlan and pullulan were taken as the linear references for derivation of g and g′. The dependences of g factor, g′ factor, and Flory factor (Φ_branched) on weight average molecular weight (M_w) were established to be g = 1.07 × 10²$M_{\text{w}}^{-0.48\pm 0.09}$, g′ = 3.63 × 10¹$M_{\text{w}}^{-0.43\pm 0.01}$, and Φ_branched = 7.08 × 10²⁰$M_{\text{w}}^{0.39\pm 0.1}$ for TM3a in 0.25 M LiCl/DMSO at 25 °C, when curdlan acted as the linear reference. A power law relationship g′ = 2.71 × 10^?1g^?0.61±0.1 for TM3a was found, and the exponent was approximately same to 0.60 established by Kurata et al. for polystyrene star molecules. The dependence of g factor on M_w for TM3b was found to be g = 1.99 × 10²$M_{\text{w}}^{-0.53\pm 0.02}$, when pullulan was used as the linear reference. On the basis of Zimm–Stockmayer equation for tetrafunctional units, molecular weight of branching unit (M₀) deduced from nonlinear curve fitting of g versus M_w was 8739 ± 564 g/mol and 3961 ± 1245 g/mol for TM3a and TM3b, respectively. The effect of different linear reference curves and polydispersity was discussed. This work gave valuable information on branched structure characterization and insights into the biosynthetic pathways of the hyperbranched polysaccharide from fungus.     

A new species of Microraptor from the Jehol Biota of northeastern China

Herein we describe a new species of Microraptor from northeastern China that provides new information on the characteristics of the genus and anatomical details suggesting a gliding behaviour. Although specimens of Microraptor have been known for at least a decade, the completeness of the new fossil provides additional morphology that highlights the uniqueness of this taxon. The new specimen, Microraptor hanqingi, is the key to understanding the evolutionary significance of hindlimb wings. A four-winged structure present on an organism sharing an evolutionary lineage leading to modern birds implies that gliding was a stage in the development of avian flight. M. hanqingi represents the largest known microraptorian from China with a total length of approximately 1 m, and was closely-related to the venomous form, Sinornithosaurus.     

Queratitis fúngica por Curvularia hominis: primer caso descrito en España

Background

Dematiaceous fungal genus Curvularia is a causal agent of keratitis, onychomycosis, and skin infections. In 2014, using DNA sequencing techniques, five new species, including Curvularia hominis, were described. In this article, a report is presented on the first clinical case of C. hominis infection in Spain. It concerns a corneal ulcer caused by this recently described species.

Factors influencing diurnal variation in height among adults

This study evaluates height loss during the day in light of variables assessable through participant self-report. Participants were 19 female and 15 male staff and students who met with us twice with a mean interval between measurement sessions of 6.96 h (SD = 0.86). Hypotheses were evaluated using two-stage least squares regression analysis (SYSTAT 10). Males and females lost similar amounts of height between sessions $(\text{male},\overline{x}=6.9\text{mm};\text{female},\overline{x}=7.4\text{mm})$. Among factors considered to impact overall height loss, sleep duration (Adj. R² = 0.181, p = 0.022) and height (Adj. R² = 0.121, p = 0.048) were useful in univariate analyses, though they were not significant in any models that included variables other than sex. Judging from log-transformed BMI variation, heavier males and females lost more height (F_{(2, 31)} = 4.59, Adj. R² = 0.179, p = 0.018). Among factors anticipated to reduce height loss by acting prior to morning measurements, only time spent walking was significantly associated (β = 2.6 ± 0.8 mm, t = 3.16, p = 0.004) when included as a predictor along with sex (p = 0.17) and log-BMI (p = 0.003). This model explained about 38% of height loss variance. None of the factors considered as potentially acting between measurement sessions showed statistically significant influences when included in the model just described, though predictor coefficients were in the anticipated direction. Results suggest that self-reported activities may be an important supplement to anthropometric studies, both for planning and later evaluation, particularly in large studies.     

Field and culture studies on the ecophysiology of the toxic dinoflagellate Alexandrium minutum (Halim) present in Greek coastal waters

In Greek coastal waters, the toxic dinoflagellate Alexandrium minutum (strain AJ879163) was detected for the first time in spring 2002. This species proliferated during spring–summer of 2002 and 2003 over a wide geographic range along the north-south Aegean Sea coastline, mostly at low concentrations (average: 10²–10³ cells L⁻¹) with one exception of higher abundance (average: 10⁵ cells L⁻¹). This study presents data on environmental (temperature, salinity, chl α, nutrients) and ecological (phytoplankton species composition, diversity, taxa dominance, community dissimilarities) parameters in the areas of A. minutum occurrence. A. minutum was isolated and grown in batch cultures used in a series of bioassay experiments for determination of its pigment composition by HPLC, half saturation constants (K_s) for nitrogen and phosphorus, and its response to different nitrogen to phosphorus (N:P) ratios.     

The genus Vietbocap Lourenço & Pham, 2010 in the Thien Duong cave,Vietnam: A possible case of subterranean speciation in scorpions (Scorpiones: Pseudochactidae)

Two new species of scorpion belonging to the family Pseudochactidae and to the genus Vietbocap are described based on specimens collected in the Thien Duong cave, which belongs to the Vom cave system, in the Phong Nha–Ke Bang National Park, Quang Binh Province, Vietnam. The previously described species from this cave, Vietbocap thienduongensis Lourenço & Pham, 2012 was collected in the initial section of the cave (1500 to 1800 m from the cave entrance) and proved to be a true troglobitic element. The diagnosis of this species, only known from males, is completed based on females collected at 750 m from the cave entrance. The two new species described here were collected respectively at 3000 and 5000 m from the cave entrance and are also true troglobitic elements, very similar to V. thienduongensis, but showing some clear morphological differences. This observed situation suggests a possible case of speciation within the cave system, the first one ever reported for scorpions. The population found at 5000 m from the entrance of the cave is a total new record of distance from a cave entrance for scorpions.     

Rumen ciliates of domestic cattle (Bos taurus taurus) in Kastamonu,Turkey, with the description of a new species

Species composition and distribution of ciliates were investigated in the rumen contents of 25 domestic cattle (Bos taurus taurus L.) living in Kastamonu, Turkey. Forty-seven species and 37 morphotypes representing 15 genera were identified. Of them, a new species of Ostracodinium was recognized and described as Ostracodinium anatolicum n. sp. This new species has two caudal lobes. The dorsal lobe is small and rounded and the ventral lobe is triangular shaped and bent toward the dorsal side like a thick hook. Furthermore, the anterior end of the macronucleus (1/5 of the length) is bent toward the left like a hook. The density of rumen ciliates in cattle was 96.8 ± 43.3 × 10⁴ cells mL⁻¹ and the mean number of ciliate species per host was 14.2 ± 4.4. Entodinium longinucleatum, E. nanellum, E. simulans and Isotricha prostoma were the most abundant species, each with a prevalence of 88%. Entodinium chatterjeei, E. bifidum m. monospinosum, Hsiungia triciliata, Oligoisotricha bubali, Ostracodinium dogieli, O. mammosum and O. munham are new host records for cattle from Turkey.     

Phylogeny and systematic revision of the karyorelictid genus Remanella (Ciliophora,Karyorelictea) with descriptions of two new species

We present here the systematic relationships and taxonomy of some newly collected karyorelictid ciliates from the genus Remanella isolated from the intertidal zone in China. Three species were investigated using observation in vivo and silver staining methods, of which two new species were identified: R. macrostoma sp. nov. and R. achroma sp. nov. Small subunit (SSU) rRNA genes were sequenced for six species and phylogenetic analyses indicated that the genus Remanella is paraphyletic, with three Loxodes species nesting within it. The monophyly of Remanella, however, could not be rejected through the approximately unbiased (AU) test (p = 0.311 > 0.05) and therefore we considered Remanella to be a valid genus. Based on a critical review of the literature, the validity of all nominal species of Remanella was discussed. Remanella unirugosa and R. multicorpusculata were regarded as junior synonyms of R. rugosa and R. granulosa respectively. We also presented here an illustrated taxonomic key based on morphologic and morphometric characteristics and containing all Remanella species considered identifiable in this revision.     

Dispersal pattern of airborne emissions from an aluminium smelter in Ouro Preto,Brazil, as expressed by foliar fluoride accumulation in eight plant species

In order to evaluate the dispersal pattern of airborne fluoride emissions, from a single source in the city of Ouro Preto, Brazil, the fluoride impact on some herbaceous plant species was studied using the plants as passive bioindicators. Foliar fluoride contents of eight species collected at different distances from an aluminium smelter were analyzed. The plant species were: Baccaharis dracunculifolia, Bidens pilosa, Borreria verticillata, Calopogonium mucunoides, Erigeron bonariensis, Hedychium coronarium, Ipomoea purpurea and Ipomoea cairica. In all species the fluoride accumulation decreased exponentially with the distance from the emission source. There was specific and distinct variation in fluoride accumulation among the species, a group of high-accumulator species (B. dracunculifolia and Bidens pilosa) and a group of low-accumulator species (I. cairica, H. coronarium and Borreria verticillata). C. mucunoides and E. bonariensis occupied an intermediate position. There was a pattern of plant contamination response during the periods analyzed. The plants nearest to the emission source, between 0.4 km northwest and 1.1 km east, showed fluoride contamination traits in leaves reaching values between 100 and 500 μg g⁻¹. Moreover, fluoride contents higher than 1000 μg g⁻¹ were found in these plants. At the most distant stations, situated 2.9 km northwest and 6 km east from the factory, the fluoride content of the dry matter was less than 10 μg g⁻¹ showing that plants at those distances were submitted to minimum contamination. There were different patterns of tolerance among the species analyzed. While B. dracunculifolia accumulated fluoride up to 1500 μg g⁻¹ in dry matter without any signs of injury, Borreria verticillata showed severe necrosis in leaves, but the fluoride content found was not higher than 120 μg g⁻¹.