Why do plants have phosphoinositides?

Phosphoinositides are inositol-containing phospholipids whose hydrolysis is a key step in the rapid responses of animal cells to extracellular signals. Whether they play similar roles in plant cells has not been established, and some have suggested alternative roles as direct modulators of specific proteins. Nonetheless, evidence is accumulating that phosphoinositide hydrolysis mediates transduction of some signal in plants. The evidence is strongest for a role in triggering the shedding of flagella by the unicellular alga Chlamydomonas reinhardtii under acid stress. Rapid kinetic analysis indicates that phosphoinositide hydrolysis occures within half a second and could trigger the rapid loss of flagella. Plant responses to pathogens and osmotic stress, as well as the regulation of turgor changes which underlie stomatal opening and closing and the movement of leaves and flower parts, may also be mediated by phosphoinositide hydrolysis. The evidence thus indicates that at least one reason plants have phosphoinositides is to mediate transduction of environmental signals.     

Why do microorganisms have aquaporins?

Aquaporins are channel proteins that enhance the permeability of cell membranes for water. They have been found in Bacteria, Archaea and Eukaryotes. However, their absence in many microorganisms suggests that aquaporins do not fulfill a broad role such as turgor regulation or osmoadaptation but, instead, fulfill a role that enables microorganisms to have specific lifestyles. The recent discovery that aquaporins enhance cellular tolerance against rapid freezing suggests that they have ecological relevance. We have identified several examples of large-scale freeze-thawing of microbes in nature and we also draw attention to alternative lifestyle-related functions for aquaporins, which will be a focus of future research.     

Why do schistosomes have separate sexes?

Paul Basch postulates that the familiar Schistosoma of humans evolved from hermaphroditic blood flukes of Mesozoic reptiles as those host became warm-blooded. The reproductive superiority that accompanied tendencies to protandry and protogyny in hermaphroditic blood flukes has led to subsequent sexual separation and dimorphism but substantial fragments of the ancestral contrasex genome persist in present-day males, as shown by common tendencies toward hermaphroditism. In present-day females the loss of the male-specific genome is far more complete and in the process of optimizing reproductive efficiency, present-day females have sacrificed many structural elements including locomotory and pharyngeal muscles. These losses have created dependency on the well-muscled male, whose primary functions seem to be compensatory; ie., physical transport of the female from the point of pairing to the point of egg deposition, stimulating growth and development by pumping blood into the female, who unpaired would starve, plus, less importantly, fertilization of the oocytes.     

Why do protein architectures have boltzmann-like statistics?

A theoretical study has shown that the occurrence of various structural elements in stable folds of random copolymers is exponentially dependent on the own energy of the element. A similar occurrence-on-energy dependence is observed in globular proteins¹ from the level of amino acid conformations to the level of overall architectures. Thus, the structural features stabilized by many random sequences are typical of globular proteins while the features rarely observed in proteins are those which are stabilized by only a minor part of the random sequences. © 1995 Wiley-Liss, Inc.     

Adaptive landscapes and emergent phenotypes: why do cancers have high glycolysis?

Investigating the causes of increased aerobic glycolysis in tumors (Warburg Effect) has gone in and out of fashion many times since it was first described almost a century ago. The field is currently in ascendance due to two factors. Over a million FDG-PET studies have unequivocally identified increased glucose uptake as a hallmark of metastatic cancer in humans. These observations, combined with new molecular insights with HIF-1α and c-myc, have rekindled an interest in this important phenotype. A preponderance of work has been focused on the molecular mechanisms underlying this effect, with the expectation that a mechanistic understanding may lead to novel therapeutic approaches. There is also an implicit assumption that a mechanistic understanding, although fundamentally reductionist, will nonetheless lead to a more profound teleological understanding of the need for altered metabolism in invasive cancers. In this communication, we describe an alternative approach that begins with teleology; i.e. adaptive landscapes and selection pressures that promote emergence of aerobic glycolysis during the somatic evolution of invasive cancer. Mathematical models and empirical observations are used to define the adaptive advantage of aerobic glycolysis that would explain its remarkable prevalence in human cancers. These studies have led to the hypothesis that increased consumption of glucose in metastatic lesions is not used for substantial energy production via Embden-Meyerhoff glycolysis, but rather for production of acid, which gives the cancer cells a competitive advantage for invasion. Alternative hypotheses, wherein the glucose is used for generation of reducing equivalents (NADPH) or anabolic precursors (ribose) are also discussed. Supported by NIH Grants R01 CA 077575 (RJG), and CA 093650 (RAG).     

Why do snails have hairs? A Bayesian inference of character evolution

Background  

Costly structures need to represent an adaptive advantage in order to be maintained over evolutionary times. Contrary to many other conspicuous shell ornamentations of gastropods, the haired shells of several Stylommatophoran land snails still lack a convincing adaptive explanation. In the present study, we analysed the correlation between the presence/absence of hairs and habitat conditions in the genus Trochulus in a Bayesian framework of character evolution.     

Why do olfactory neurons have unspecific receptive fields?

Biological olfactory neurons are deployed as a population, most responding to a large variety of chemical compounds, that is, they possess unspecific receptive fields. The question of whether this unspecificity results from some physical constraint placed upon chemical transduction, or on the other hand, is beneficial to system performance is unclear. In this paper we employ the notion of Fisher information to address this question by quantifying how both the distribution and the tunings of the receptive fields within olfactory receptor populations affect the optimal estimation performance of the system. Our results show that overlapping sensory neuron tunings that respond to common chemical compounds have better estimation performance than perfectly specific tunings. Our results suggest two phenomena that might represent general principles of organization within biological sensory systems responding to multiple stimuli: maximization of the diversity of tunings and homogeneity in the distribution of these different receptive fields across the stimulus space (independent of the statistics of the input stimuli). Our model predicts that a local randomized mechanism controlling receptor specificities generates optimal multidimensional stimulus estimation, for which there is some experimental evidence from the biology.     

Why do older workers have problems with technology?

Why do older workers seem to have problems with technology? In this paper, I will review several possible reasons and illustrate them with evidence, often anecdotal, from our work as ergonomics practitioners. We find that older workers have more to "unlearn" from their accumulated experience. They may suffer from gradual or not so gradual ailing faculties of sight, hearing, dexterity, stamina, memory, and reaction time. They may exhibit a fear of making mistakes, and they may have strongly established preferences and pessimism about technological gimmicks. But the real problem is often that the designers have failed to anticipate the requirements of their users; they have failed to design for a range of abilities broader than their own; they have failed to test their designs with real people; and they have failed to learn from the experience of the market. Getting design right for older users is really only a continuation of getting design right for all.     

Why do good hunters have higher reproductive success?

Anecdotal evidence from many hunter-gatherer societies suggests that successful hunters experience higher prestige and greater reproductive success. Detailed quantitative data on these patterns are now available for five widely dispersed cases (Ache, Hadza, !Kung, Lamalera, and Meriam) and indicate that better hunters exhibit higher age-corrected reproductive success than other men in their social group. Leading explanations to account for this pattern are: (1) direct provisioning of hunters’ wives and offspring, (2) dyadic reciprocity, (3) indirect reciprocity, (4) costly signaling, and (5) phenotypic correlation. I examine the qualitative and quantitative evidence bearing on these explanations and conclude that although none can be definitively rejected, extensive and apparently unconditional sharing of large game somewhat weakens the first three explanations. The costly signaling explanation has support in some cases, although the exact nature of the benefits gained from mating or allying with or deferring to better hunters needs further study. For comments on earlier drafts, I thank Monique Borgerhoff Mulder, Mike Gurven, Ray Hames, Kristen Hawkes, Kim Hill, Robert Kelly, Frank Marlowe, John Patton, and Polly Wiessner. Rebecca Bliege Bird and Douglas W. Bird invited me to collaborate in the Meriam research and (along with Del Passi of Mer) collected the data on Meriam demography. Geoff Kushnick and Matt Wimmer ably assisted with coding and statistical analysis of these data. Eric Alden Smith (PhD 1980, Cornell University) is a professor of anthropology at the University of Washington, Seattle. His research interests include the links between production and reproduction, the ecology and evolution of collective action, and politics in small-scale societies. He has conducted fieldwork among Inuit on Hudson Bay, Meriam in Torres Strait, and Mardu Aborigines in the Australian Western Desert.     

Why does Escherichia coli have two primary pathways for synthesis of glutamate?

Escherichia coli has two primary pathways for glutamate synthetase-glutamate synthase pathway is known to be essential for synthesis at low ammonium concentrations and for regulation of the glutamine pool, but the necessity for glutamate dehydrogenase (GDH) has been uncertain. The results of competition experiments between the wild type and a GDH-deficient mutant during nutrient-limited growth and of direct enzyme measurements suggest that GDH is used in glutamate synthesis when the cell is limited for energy (and carbon) but ammonium and phosphate are present in excess, while the glutamine synthetase-glutamate synthase pathway is used when the cell is not under energy limitation. The use of alternative routes for glutamate synthesis implies that the energy cost of biosynthesis may be less when energy is limited than when energy is unlimited.     

Temporal pollen pattern in temperate trees: expedience or fate?

European forests are populated with a variety of wind‐pollinated tree species. Their pollen productivity and spatio‐temporal pattern are largely unknown. Long‐term data (17 years) collected at 22 sites across Austria were presented and the pollen production of 12 tree genera was analysed. We ranked the tree genera according to their pollen productivity taking actual tree abundances of the Austrian Forestry Inventory into account. The productivity varied strongly among tree genera with a maximum for Betula. Pollen production in Larix, Abies and Picea amounted to approximately 1/20, while in increasing order Salix, Quercus, Alnus, Populus and Fraxinus produced approximately 1/3 to 1/4 of the respective Betula estimate. In general, pollen quantity in broadleaves was higher than in conifers. We analysed the temporal pollen production pattern by means of hierarchical cluster analysis and identified three major groups: [(Fagus, Larix, Picea, Abies), (Alnus, Betula, Fraxinus)], [Carpinus],[Populus, Salix, Pinus, Quercus]. Distance matrices based on life‐history traits as well as molecular phylogeny were also constructed; they correlated significantly with each other by means of Mantel‐tests. However, there was no significant relationship between the distances on temporal pollen production with the other matrices. Intermittent or idiosyncratic pollen production was studied by means of deviation from expected means, skewness and spindle diagrams. We proposed that Fagus, Carpinus, Larix, Picea and Abies belong to ‘masting pollen producers’, while the remaining genera idiosyncratically produced pollen over the monitored period. Moreover we correlated the distance matrix of pollen production for each tree genus at each sampling site with respective ‘ecological distance matrices’ based on aerial and altitudinal distance among sites. Significant correlations were detected for tree genera (Fagus, Larix, Picea) which were also prone to pollen masting, thus indicating a Moran effect.     

Why do tumor cells have a high aerobic glycolysis?

In Ehrlich ascites cells and several other tumors, the high aerobic glycolysis is maintained by generation of ADP and Pi by the plasma membrane Na+K+ ATPase. The high ATP activity is caused by a defective pump that operates at a low efficiency. Studies of the mechanism of action of the Na+K+ ATPase and other pump ATPases suggest several alternative mechanisms that might account for the decreased efficiency. The possibility of involvement of a proteolipid is under investigation.     

Why do male snakes have longer tails than females?

In most snake species, males have longer tails than females of the same body length. The adaptive significance of this widespread dimorphism has attracted much speculation, but few tests. We took advantage of huge mating aggregations of red-sided gartersnakes (Thamnophis sirtalis parietalis) in southern Manitoba to test two (non-exclusive) hypotheses about the selective forces responsible for this dimorphism. Our data support both hypotheses. First, relative tail length affects the size of the male copulatory organs (hemipenes). Males with longer tails relative to body length have longer hemipenes, presumably because of the additional space available (the hemipenes are housed inside the tail base). Second, relative tail length affects male mating success. Males with partial tail loss (due to predation or misadventure) experienced a threefold reduction in mating success. Among males with intact tails, we detected strong stabilizing selection on relative tail length in one of the two years of our study. Thus, our data support the notion that sex divergence in tail length relative to body length in snakes reflects the action of sexual selection for male mating success.