Systematic relationships within the Microtus arvalis (Rodentia: Cricetidae) group in Iran,inferred from cytogenetic analyses

The distribution of C-heterochromatin and nucleolar organizer regions (NORs) was studied in three species of voles of the Microtus arvalis group in Iran: M. mystacinus, M. kermanensis, and M. transcaspicus. The C-banding pattern and NORs distribution were similar in M. mystacinus and M. kermanensis suggesting taxonomic proximity of these two species. At the same time, the karyotypes of M. mystacinus from Iran were different in C-banding pattern from the complements of conspecific 54-chromosome voles from Europe and other regions of Asia. The most distinct difference was in size of the distal C-positive block of heterochromatin on the X chromosome. In this respect M. mystacinus from Iran and M. kermanensis resembled M. transcaspicus. Small size of the distal C-positive heterochromatic block may be ancestral whereas larger size is derived. The X chromosome of M. transcaspicus can be derived from that of M. mystacinus and M. kermanensis by a large inversion or centromeric shift.     

Pairing and recombination between individual chromosomes of wheat and rye in hybrids carrying the ph1b mutation

Wheat-rye chromosome associations at metaphase I studied by Naranjo and Fernández-Rueda (1991) in ph1b ABDR hybrids have been reanalysed to establish the frequency of pairing between individual chromosomes of wheat and rye. Wheat chromosomes, except for 2A and 2D, and their arms were identified by C-banding. Diagnostic C-bands and other cytological markers such as telocentrics or translocations were used to identify each one of the rye chromosomes and their arms. Both the amount of telomeric C-heterochromatin and the structure of the rye chromosomes relative to wheat affected the level of wheatrye pairing. The degree to which rye chromosomes paired with their wheat homoeologues varied with each of the three wheat genomes; in most groups, the B-R association was more frequent than the A-R or D-R associations. Recombination between arms 1RL and 2RL and their homoeologues of wheat possessing a different telomeric C-banding pattern was detected and quantified at anaphase I. The frequency of recombinant chromosomes obtained supports the premise that recombination between wheat and rye chromosomes may be estimated from wheat-rye pairing.     

Meiotic behaviour of Un,D and R genomes in the amphiploid Aegilops ventricosa -Secale cereale and the parental species

Summary Meiotic pairing frequencies of the Un and D genomes of Ae. ventricosa and the R of S. cereale could be easily established at metaphase I in Aegilops ventricosa — Secale cereale amphiploid plants as well as in its parental species by using the C-banding technique procedure. The results show a high diminution of chromosome pairing for all genomes in the amphiploid with respect to its parental species probably due to C-heterochromatin content and/or genotypic or cryptic interactions between the three genomes.     

C-heterochromatin polymorphism in Baetica ustulata: intraindividual variation and fluorescence banding patterns

In an attempt to determine the nature and extent of the extensive C-banding heterochromatin variation found in the monospecific genus Baetica, 52 individuals were analysed by C-banding and fluorescence methods. The use of fluorescent DNA-binding dyes with different specificities allowed us to distinguish three major categories of constitutive C-heterochromatin. Two of these correspond to AT-rich and GC-rich DNA; the third shows no fluorescence with any of the fluorochromes employed. Apart from confirming polymorphisms for C-band patterns in the medium-sized autosomes, several C-banding variants (cytotypes) were found in the two testes of one individual. From a comparative study of these cytotypes we deduce that equal or unequal sister chromatid exchanges, as well as mitotic crossovers, operating during the early germ line divisions have been the major mechanisms responsible for this intraindividual variation. Because of the high level of C-band polymorphism found in this species, it seems reasonable to argue that, for unknown reasons, certain processes that normally occur over generations have occurred repeatedly in this abnormal individual.     

Nature and distribution of heterochromatinized regions in the chromosomal races of Pycnogaster cucullata (Insecta,Orthoptera)

Populations belonging to the XO and neo-XY races of P. cucullata have been analysed with C-banding and fluorescent DNA-binding dyes. The extent of C-heterochromatin variation was found to be considerably greater than that described in previous papers. Most of the heterochromatinized regions are GC-rich and could be derived from the GC-rich sequences of the NORs. Since the gain of heterochromatin does not involve detectable modification of the chromosome size, the heterochromatinization process may be considered as an example of euchromatin transformation. On the other hand, the distribution of heterochromatin in the sex chromosomes seems to be markedly non-random, probably due to the selective advantage of a complementary distribution between neo-X and neo-Y chromosomes.     

DNase I digestion as a tool for the quantitative evaluation of C-heterochromatic-DNA in situ.

The amount of DNA resisting the C-banding pre-treatments (C-heterochromatic-DNA) was found to account for the interspecific differences of genome size in different Primate groups. The evaluation of this parameter is therefore of great interest in cytotaxonomy. In this work, DNase I digestion was used instead of the pre-treatments C-banding, in an attempt to set up a suitable method for the quantitative evaluation of C-heterochromatic-DNA in both metaphase chromosomes and interphase chromatin. In fact DNase I is known to preferentially digest "active or potentially active" chromatin, and the highly repetitive and inactive DNA in C-heterochromatin should characteristically resist DNase I cleavage. As a model system, differently fixed mouse splenocytes were treated with DNase I for various times, and the digestion was monitored by flow cytometry after propidium iodide staining. In addition, mouse metaphase preparations from lymphocyte cultures were also digested with DNase I, and the amount of residual DNA was evaluated by static microfluorometry. Under controlled conditions of fixation, enzyme concentration, time and temperature, the same limit-digest can be obtained in both interphase nuclei and metaphases, which corresponds to the amount of residual DNA after C-banding and has a C-banding-like pattern in chromosomes.     

Constitutive heterochromatin in karyotypes of two Cicadidae species from Japan (Cicadoidea,Hemiptera)

Karyotypes of males of cicadas Tibicen bihamatus (Motschulski) and Platypleura kuroiwae Matsumura were studied using C-banding technique. In Tibicen bihamatus two types of C-band distribution were observed. Two chromosome pairs have C-bands at one of the chromosome ends, while in the other, including the sex chromosome, C-heterochromatin blocks occurred at both ends. Platypleura kuroiwae has a smaller amount of C-heterochromatin located as small subterminal blocks. The intercalar C-bands were seen in the early spermatogonial metaphase chromosomes.     

C-banding karyotype and relationship of the dipodids Allactaga and Jaculus (Mammalia: Rodentia) in Egypt

The C-banding karyotype of the jerboas Allactaga tetradactyla, Jaculus jaculus jaculus, and Jaculus orientalis was described and interspecific relationships were discussed. Despite the conservation of a relatively small amount of C-heterochromatin located at the centromeric region of some chromosomes in all karyotypes, a striking loss of C-heterochromatin was clearly observed in J. orientalis. C-bands were totally absent in 33 of the 48 chromosomes of J. orientalis, compared to only 7 for J.j.jaculus and 11 for A. tetradactyla. The differences in C-banding amongst karyotypes of the three species were attributed either to transformation of heterochromatin into euchromatin or vice versa, deletion of heterochromatic segments resulting from pericentric inversions, or to variation of euchromatin content and its correlation with the chromosome size and arrangement of heterochromatin. The present findings are consistent with the main hypotheses derived from morphological, chromosomal, and biochemical data that the genera Allactaga and Jaculus have independently developed from a common ancestral form and that J. jaculus and J. orientalis are both distinct congeneric species, but revealed that the C-banding karyotypes of both J.j.jaculus and J. orientalis are distantly related to each other. Therefore, it is concluded that the karyotype of J.j.jaculus may be ancestral and that of J. orientalis may have derived from it.     

Chromosomal evidence for a polytypic structure of Arvicanthis niloticus (Rodentia, Muridae)

The analysis of R- and C-banding patterns of chromosomes of Arvicanthis niloticus from five localities of Africa (Egypt, Senegal, Burkina-Faso, Mali and Central African Republic) revealed the existence of three karyotypic forms labelled in the study as ANI-1, ANI-2 and ANI-3. These forms differ from each other by 6 to 8 chromosomal rearrangements such as reciprocal and Robertsonian translocations and pericentric inversions. Moreover, they possess different quantities of C-heterochromatin. The data indicate that these three forms are distinct species, cytogenetically isolated, and that a further taxonomic analysis of the genus Arvicanthis is needed.     

C-heterochromatin polymorphism and variation in chiasma localization in Euchorthippus pulvinatus gallicus (Acrididae,Orthoptera)

Eight populations of the grasshopper Euchorthippus pulvinatus gallicus have been analyzed by means of C-banding. Chromosome pairs M6, M7 and S8 show both quantitative and qualitative variation in their C-heterochromatin. There are at least four different types of M6, three of M7 and two of S8. Differences in the frequencies of these chromosome types have been found between populations. Within a given population the frequencies of the different M7 and S8 chromosomes fit a Hardy-Weinberg distribution and they remain constant within and between generations. The possible adaptative role of supernumerary heterochromatin as leading to a redistribution of chiasmata in the heterochromatin carrier chromosomes is discussed.     

Nucleotide sequence of a highly repeated DNA sequence and its chromosomal localization in Allium fistulosum

A highly repeated DNA sequence with a repeating unit of approximately 380bp was found in EcoRV digests of the total genomic DNA of Allium fistulosum. Three independent clones containing this unit were isolated, and their repeating units sequenced. These units showed more than 94% sequence homology, and the copy number was estimated to be about 2.8×10⁶ per haploid genome. In situ hybridization, with the repeating unit as a probe, and C-banding analyses indicated that the repeated DNA sequence of A. fistulosum is closely associated with the major C-heterochromatin in the terminal regions of all 16 chromosomes at mitotic metaphase. The characters of the repeating unit are similar to those of the A. cepa unit, which is taxonomically closely related to A. fistulosum.     

Infraspecific variation in C-banded karyotype and chiasma frequency inCucumis sativus (Cucurbitaceae)

Infraspecific cytogenetical variation was studied in a diverse collection of five non-cultivated and cultivatedCucumis sativus accessions. The individual chromosomes of different accessions could be identified by the C-banding pattern and chromosome measurements. About 40–50% of the genomic area are made up of heterochromatin inC. sativus. The non-cultivated accessions exhibit more heterochromatin and lower chiasma frequencies per pollen mother cell than cultivated accessions. There is infraspecific variation in C-banding pattern, karyomorphology and multinucleolate cells. The use of C-banding in infraspecific classification is discussed.     

Stability of C-band heterochromatin polymorphism in 2 transplantable human cell lines differing in sensitivity to Coxsackie virus B3

Heterochromatin of chromosomes is studied by means of a C-banding technique for the J-96 line of human cells, which is susceptible to enteroviruses and for the J-41 cell line derived from this culture and possessing high specific resistance to Coxsackie B viruses. The data obtained demonstrate stability of variform C-heterochromatin of chromosome pairs 1, 9 16 and certain marker chromosomes in the course of long-term cultivation.     

Identification and chromosomal location of tandemly repeated DNA sequences in Allium cepa

A 314-bp tandemly repeated DNA sequence, named pAc074, was characterized in Allium cepa by fluorescence in situ hybridization (FISH) analyses using random amplified fragment as probe. The nucleotide sequences of the clone pAc074 is partially homologous to the satellite DNA sequences, ACSAT1, ACSAT2, and ACSAT3, of A. cepa with 81%, 81% and 78% similarity, respectively. Our sequential C-banding and FISH with pAc074 probe also clearly showed a close relation between Cheterochromatin at telomeric region and pAc074 sequences on all the chromosomes except on chromosome 6. On the long arm of chromosome 7, pAc074 sequences appeared as interstitial band which did not correspond to C-heterochromatin bands. Instead, the C-heterochromatin bands corresponded with the 5S rDNA signals. This is the first evidence of simultaneous banding of the 5S rDNA and C-band in A. cepa.     

Cytochemical evaluation of C-heterochromatic-DNA in metaphase chromosomes.

A method is proposed to evaluate the amount of DNA resistant to the C-banding pretreatments (C-heterochromatic-DNA) in metaphase chromosomes. Measurements were performed by microfluorometry on propidium iodide stained metaphases of man, gorilla and mouse; in these species, C-heterochromatin exhibits significant differences of both base composition and distribution along the chromosomes. The amount of C-heterochromatic-DNA was found to be about 16%, 28% and 58% of the total DNA content (genome size) in man, gorilla and mouse, respectively. The areas of C-bands after Giemsa staining were also assessed by microdensitometry, and corresponded to about 8%, 15% and 14% of the total karyotype area of man, gorilla and mouse respectively. No direct relation thus exists between C-band areas and the amount of DNA resistant to the C-banding pretreatments. In man and gorilla, the amount of C-heterochromatic-DNA accounts for the differences observed in genome size.     

Analysis of different banding patterns and late replicating regions in chromosomes of Allium cepa,A. sativum and A. nigrum

Different banding procedures and preferential Giemsa staining of late replicating DNA-rich regions were carried out in metaphase chromosomes of three species belonging to different sections of the genus Allium (A. cepa, A. sativum and A. nigrum). The banding, as well as the late replicating patterns were species-specific. The late replicating pattern proved to be, in all cases, the more detailed, and represented the highest percentage of the karyotype differentially stained. Lower percents of the karyotype positively stained were accounted for by C-banding, by modified C-banding and by N-banding. In A. cepa interphase nuclei the pattern of constitutive heterochromatin fitted well with that of late replicating DNA-rich regions, but the coincidence with that revealed by C-banding was only partial. This supports the suggestion that late replicating regions may be considered to be a special category of heterochromatin. On the other hand, it seems that not all C-banded material replicates at the end of the S phase. By the modified C-banding, stained centromere dots or small bands, as well as bands at the NORs are observed.     

G-band homology and C-band variation in the Japanese mustelids,Mustela erminea nippon andM. sibirica itatsi

The diploid number(2n)and fundamental number (FN) were 44 and 64 inMustela erminea nippon and 38 and 64 inM. sibirica itatsi. In spite of such a marked dissimilarity in their chromosome constitution, most of the chromosomes of these two species showed high G-band homology. On the other hand, interspecific variations in the amount of C-heterochromatin were observed in several pairs of chromosomes which were regarded, based on their G-banding patterns, to have arisen from a common origin. Some of the chromosome pairs associated with the C-heterochromatin variations showed significant differences in length or arm ratio, whereas others did not. These findings strongly indicate that the G-banding patterns might have been well conserved, at least in the euchromatic regions, through the speciation process; in contrast, C-heterochromatin showed quantitative variations, some of which could be regarded to have been formed by duplication. Thus, the karyological relationships between the Japanese ermine and the Japanese weasel could be explained by Robertsonian fusion and quantitative alteration of C-heterochromatin.     

Analysis of metaphase I chromosome association in species of the genus Aegilops

Summary Metaphase-I chromosome associations in every diploid and polyploid species of the genus Aegilops were studied using C-banding in order to analyse the cytogenetic behaviour of the whole complement as well as of specific genomes in different polyploid species. Differences were observed in the frequency of associations per cell among different species of the same ploidic level and even between species sharing the same genomic constitution. Differences were also found between different genomes within the same polyploid species and between the same genome when present in several diploid and polyploid species. Several factors proposed as having an influence on the frequency of metaphase-I associations, such as chromosome morphology, C-heterochromatin content, genetic control and genome interactions, are discussed. Most of the polyploid Aegilops species showed a diploid-like behaviour at metaphase I although multivalents involving homoeologous associations were occasionally observed in Ae. biuncialis, Ae. juvenalis and Ae. crassa(6x); therefore, the Aegilops diploidising genetic system is not equally effective in all polyploid species.     

Computer assisted karyotype analysis of Pyrrhopappus carolinianus

With the help of Computer Aided Karyotyping procedures, Ag-NOR staining and C-banding techniques, the karyotype of Pyrrhopappus carolinianus (Asteraceae, Lactuceae) has been studied. The species has 2n=12 chromosomes. Silver staining reveals that the two shortest pairs of chromosomes possess NOR's. On the basis of chromosome length and centromere position, only the longest chromosome pair and the satellite chromosomes can be identified. Two types of C-banding can be obtained, dependent on the temperature of the hydrochloric acid hydrolysis of the root tips. Hydrolysis at 60°C results exclusively in centromeric bands, whereas a treatment at room temperature reveals a pattern of intercalary bands. A computer assisted analysis of the intercalary banding pattern resulted in the construction of schematic representation of the average C-banding pattern. This banding pattern allows an easy identification of each of the chromosome pairs.     

Evaluation of Phylogenetic Relationships between Five Polyploid Aegilops L. Species of the U-Genome Cluster by Means of Chromosome Analysis

Four tetraploid (Aegilops ovata, Ae. biuncialis, Ae. columnaris, and Ae. triaristata) and one hexaploid (Ae. recta) species of the U-genome cluster were studied using C-banding technique. All species displayed broad C-banding polymorphism and high frequency of chromosomal rearrangements. Chromosomal rearrangements were represented by paracentric inversions and intragenomic and intergenomic translocations. We found that the processes of intraspecific divergence of Ae. ovata, Ae. biuncialis,and Ae. columnaris were probably associated with introgression of genetic material from other species. The results obtained confirmed that tetraploid species Ae. ovata and Ae. biuncialis occurred as a result of hybridization of a diploidAe. umbellulata with Ae. comosa and Ae. heldreichii, respectively. The dissimilarity of the C-banding patterns of several chromosomes of these tetraploid species and their ancestral diploid forms indicated that chromosomal aberrations might have taken place during their speciation. Significant differences of karyotype structure, total amount and distribution of C-heterochromatin found between Ae. columnarisand Ae. triaristata, on the one hand, and Ae. ovata and Ae. biuncialis, on the other, evidenced in favor of different origin of these groups of species. In turn, similarity of the C-banding patterns of Ae. columnaris and Ae. triaristata chromosomes suggested that they were derived from a common ancestor. A diploid species Ae. umbellulata was the U-genome donor of Ae. columnaris and Ae. triaristata;however, the donor of the second genome of these species was not determined. We assumed that these tetraploid species occurred as a result of introgressive hybridization. Similarity of the C-banding patterns of chromosomes of Ae. recta and its parental species Ae. triaristata and Ae. uniaristata indicated that the formation of the hexaploid form was not associated with large modifications of the parental genomes.