Enhancing the biodiversity of Scotland's forest resource through the development of a network of forest habitats

Scottish Natural Heritage, the statutory conservation agency, is considering the desirability and feasibility of developing a network of woodland habitats to redress the long term trend of fragmentation and isolation. Woodland conservation has long been based on site protection, but recent changes in policy, attitude and practice have opened up the possibility of recreating native forest cover on a much larger scale. The ECONET approach appears to have much to offer as the basis for enhancing the biodiversity of Scotland's forest resource. A network could be developed from existing woods to form a Scotland-wide network of Core Forest Areas and major landscape links, largely associated with major valleys. To achieve this, existing concentrations of woodland would be extended into poorly wooded districts. Many vulnerable wildlife species are likely to benefit, and there would be other benefits for recreation, landscape and timber production.     

Using Bayesian networks to incorporate uncertainty in habitat suitability index models

Habitat suitability index (HSI) models rarely characterize the uncertainty associated with their estimates of habitat quality despite the fact that uncertainty can have important management implications. The purpose of this paper was to explore the use of Bayesian belief networks (BBNs) for representing and propagating 3 types of uncertainty in HSI models—uncertainty in the suitability index relationships, the parameters of the HSI equation, and measurement of habitat variables (i.e., model inputs). I constructed a BBN–HSI model, based on an existing HSI model, using Netica™ software. I parameterized the BBN's conditional probability tables via Monte Carlo methods, and developed a discretization scheme that met specifications for numerical error. I applied the model to both real and dummy sites in order to demonstrate the utility of the BBN–HSI model for 1) determining whether sites with different habitat types had statistically significant differences in HSI, and 2) making decisions based on rules that reflect different attitudes toward risk—maximum expected value, maximin, and maximax. I also examined effects of uncertainty in the habitat variables on the model's output. Some sites with different habitat types had different values for E[HSI], the expected value of HSI, but habitat suitability was not significantly different based on the overlap of 90% confidence intervals for E[HSI]. The different decision rules resulted in different rankings of sites, and hence, different decisions based on risk. As measurement uncertainty in habitat variables increased, sites with significantly different (α = 0.1) E[HSI] became statistically more similar. Incorporating uncertainty in HSI models enables explicit consideration of risk and more robust habitat management decisions. © 2012 The Wildlife Society.     

Terrestrial food web complexity in Amazonian forests decays with habitat loss

1. Download : Download high-res image (141KB)
2. Download : Download full-size image

     

跨区域视角下苏锡常地区白鹭生境网络优化

打破行政界线,跨区域协同治理生态问题,是生态文明建设的必然要求。选取快速城镇化地区苏锡常为研究区域,地区优势物种白鹭为研究对象,在等量保护成本限定下,基于跨区域和分区视角,将保护成本用于生境斑块优化,通过设定不同的优化情景,确定新增生境斑块的优化顺序,计算出各情景下生态保护成本与生态收益提升值,对比不同优化方案下网络结构指数变化情况,进而探讨跨区域生境网络优化是否能够更好地实现物种保护的"最大覆盖问题"。结果表明:(1)新增生境斑块的总量和空间布局都呈现为不均匀分布,以苏州最多,无锡次之,常州最少;具有"网络连通性较高但保护成本较低"的斑块分布特征与之相同;(2)根据单位效益成本值大小对生境斑块优化排序,将保护成本优先用于"网络连通性指数较高而保护成本较低"的生境斑块。在等量保护成本限定下,跨区域生境网络优化比分区优化的网络连通性指数α、β、γ分别提升了13.17%、12.97%、13.76%,实现保护成本的生态效益提升最大化,更好地解决了物种保护的"最大覆盖问题"。     

Node self‐connections and metapopulation persistence: reply to Saura (2018)

Saura ( 2018 ) claims that studies using the Probability of Connectivity metric (PC) had already demonstrated the importance of including node self‐connections in network metrics. As originally defined and used, PC cannot test the importance of self‐connections. However, with key terms redefined, PC could be a useful tool in future work.     

Apps can help bridge restoration science and restoration practice

Scientists need to find innovative ways to communicate their findings with restoration practitioners in an era of global change. Apps are a promising bridge between restoration science and practice because they apply broad scientific concepts to specific situations. For example, habitat connectivity promotes ecological function, but practitioners lack ways to incorporate connectivity into decision‐making. We created an app where users calculate how habitat restoration or loss affects connectivity. By providing our app as an example and discussing the benefits and challenges in creating apps for practitioners, we encourage other restoration ecologists to similarly create apps that bridge science with practice.     

基于多源数据的城市生境网络规划方法研究与实践

生态文明建设导向下的城镇发展建设,需要切实平衡人与自然的空间发展矛盾,应用多源数据分析和判断如何建设一个体系更健康、结构更合理、功能更完善的城市绿色空间体系,具有重要的规划探索和实践意义。选定目标鸟种,研究建立其潜在生境空间参数指标体系,运用多源数据分析潜在生境、廊道和踏脚石增设需求。构建以鸟类生境为代表的特定类型生境网络、指导城市绿色空间布局。随着多源数据获取成本的逐步降低和物种类群生境参数的逐步深化发展,该方法在研究城市生境网络构建和绿色空间布局上的作用还将进一步提升。     

多类群水鸟共存栖息地网络结构稳定性及其优化方案——以盐城滨海湿地为例

作为新设立的世界自然遗产地,盐城滨海湿地水鸟栖息地保护受到广泛关注。鉴于该区域在全球生物多样性与水鸟栖息地保护中重要性,针对具有空间隔离特征的水鸟栖息地开展网络稳定性研究,对提高遗产地栖息地保护质量具有重要的示范意义。基于此,利用复杂网络理论、生态踏脚石原理和电流模型,分析了盐城滨海湿地多类群水鸟栖息地网络结构现状及不同情景下网络鲁棒性。研究结果显示,三类水鸟重要生境区主要分布在各栖息地内部以及大丰至条子泥栖息地一带,其中,北部生境区数量为18个,南部生境区6个。北部生境区总面积相当于南部生境区的1/2,而平均面积仅相当于1/6。从踏脚石分布来看,其主要分布在重要生境区附近,不同栖息地存在差异。研究区踏脚石网络由35个重要节点和153个一般节点组成,南北部网络结构要素存在差异。最佳保护情景下,网络鲁棒性表现较好,中心度值大的节点对整个网络连通性的支撑作用良好。提出了栖息地网络优化方案。     

How does temporal variation in habitat connectivity influence metapopulation dynamics?

Metapopulation persistence depends on connectivity between habitat patches. While emphasis has been placed on the spatial dynamics of connectivity, much less has been placed on its short‐term temporal dynamics. In many terrestrial and aquatic ecosystems, however, transient (short‐term) changes in connectivity occur as habitat patches are connected and disconnected due, for example, to climatic or hydrological variability. We evaluated the implications of transient connectivity using a network‐based metapopulation model and a series of scenarios representing temporal changes in connectivity. The transient loss of connectivity can influence metapopulation persistence, and more strongly autocorrelated temporal dynamics affect metapopulation persistence more severely. Given that many ecosystems experience short‐term and temporary loss of habitat connectivity, it is important that these dynamics are adequately represented in metapopulation models; failing to do so may yield overly optimistic‐estimates of metapopulation persistence in fragmented landscapes.     

动物的生境选择

动物的生境选择颜忠诚陈永林（中国科学院动物研究所,北京１０００８０）ＨａｂｉｔａｔＳｅｌｅｃｔｉｏｎｉｎＡｎｉｍａｌｓ．ＹａｎＺｈｏｎｇｃｈｅｎｇ,ＣｈｅｎＹｏｎｇｌｉｎ（ＩｎｓｔｉｔｕｔｅｏｆＺｏｏｌｏｇｙ,ＡｃａｄｅｍｉａＳｉｎｉｃａ,Ｂｅｉｊｉ...     

Strategic Habitat Conservation for Beach Mice: Estimating Management Scenario Efficiencies

The Perdido Key beach mouse (Peromyscus polionotus trissyllepsis), Choctawhatchee beach mouse (P. p. allophrys), and St. Andrew beach mouse (P. p. peninsularis) are 3 federally endangered subspecies that inhabit coastal dunes of Alabama and Florida, USA. Conservation opportunities for these subspecies are limited and costly. Consequently, well-targeted efforts are required to achieve their downlisting criteria. To aid the development of targeted management scenarios that are designed to achieve downlisting criteria, we developed a Bayesian network model that uses habitat characteristics to predict the probability of beach mouse presence at a 30-m resolution across a portion of the Florida Panhandle. We then designed alternative management scenarios for a variety of habitat conditions for coastal dunes. Finally, we estimated how much area is needed to achieve the established downlisting criterion (i.e., habitat objective) and the amount of effort needed to achieve the habitat objective (i.e., management efficiency). The results suggest that after 7 years of post-storm recolonization, habitat objectives were met for Perdido Key (within its Florida critical habitat) and Choctawhatchee beach mice. The St. Andrew beach mouse required 5.14 km² of additional critical habitat to be protected and occupied. The St. Andrew beach mouse habitat objective might be achieved by first restoring protected critical habitat to good dune conditions and then protecting or restoring the unprotected critical habitat with the highest predicted probability of beach mouse presence. This scenario provided a 28% increase in management efficiency compared to a scenario that randomly protected or restored undeveloped unprotected critical habitat. In total, when coupled with established downlisting criteria, these quantitative and spatial decision support tools could provide insight into how much habitat is available, how much more is needed, and targeted conservation or restoration efforts that might efficiently achieve habitat objectives. © 2020 The Wildlife Society.     

Demography and feeding behavior of the kelp crab Taliepus marginatus in subtidal habitats dominated by the kelps Macrocystis pyrifera or Lessonia trabeculata

We studied the population and feeding ecology of the kelp crab Taliepus marginatus in subtidal kelp forests dominated by either of two morphologically different kelp species (Macrocystis pyrifera or Lessonia trabeculata) in northern Chile. The sizes and abundances of T. marginatus differed between the two kelp habitats. Kelp crabs were more abundant in the M. pyrifera forest than in the L. trabeculata forest. Size‐frequency distributions showed that juvenile and immature crabs were more common in the M. pyrifera forest than in the L. trabeculata forest, where reproductive adults predominated. The smaller crabs in the M. pyrifera habitat also consumed a higher proportion of kelp tissues than the larger crabs in the L. trabeculata habitat, which had a higher proportion of animal food in their diet. In both kelp forests, individuals of T. marginatus showed a similar pattern of nocturnal feeding over a 24‐h period, consuming more food at night than during the day. The more complex and dense forests of M. pyrifera appear to present better nursery habitats for juvenile kelp crabs than the more open and less dense forests dominated by L. trabeculata. These results suggest that the role of the two kelp habitats for T. marginatus varies during the life cycle of the kelp crabs, with M. pyrifera tending to have nursery function and L. trabeculata being more suitable as a reproductive habitat.     

濒危乔木红豆杉不同更新阶段的生境特征比较

以福建梅花山自然保护区濒危乔木红豆杉(Taxus chinensis(Pilger)Rehd.)为对象,对红豆杉的种子排放、幼苗更新、幼树更新3个更新阶段的生境特征进行研究,并比较生态位的变化,以此评价红豆杉不同更新阶段的生境需求。结果显示:随着个体发育生长,红豆杉更新生境发生了明显转变,种子排放地与幼苗生境空间一致性较高,而它们与幼树生境存在明显的空间不一致性。从生态位角度来看,种子排放地和幼苗生境重叠指数≤0.5的仅有海拔和坡度2个因子,这说明幼苗的空间格局受到鸟类传播的强烈影响,鸟类传播所排放的种子能萌发并生长成幼苗。幼苗和幼树生境重叠指数≤0.5的因子有海拔、坡向、植被类型,说明在大尺度景观因子和庇护植被层面上,植物的更新需求出现了明显的不一致。研究结果表明红豆杉的更新生境存在明显的阶段变化,可能造成植物更新出现建成限制,使幼树阶段成为更新的瓶颈阶段。     

官山保护区白颈长尾雉栖息地适宜性评价

2009年4月-2009年5月和2009年12月-2010年1月,在江西官山国家级自然保护区对白颈长尾雉(Syrmaticus ellioti) 繁殖期和越冬期的栖息地进行调查。通过实地调查,结合已有研究结果,确定了官山自然保护区白颈长尾雉栖息地适宜性评价因子,即植被类型、海拔、坡度和坡向等4个栖息地因子。基于"被利用生境-可获得生境比较法",以对各评价因子不同梯度的资源选择指数为依据,确定了白颈长尾雉适宜性评价准则。应用ArcGIS 9.3空间分析功能和栖息地片断化指数,对官山保护区白颈长尾雉栖息地进行了适宜性评价。结果表明:在官山自然保护区适宜白颈长尾雉繁殖的栖息地斑块有502个,总面积为3307 hm²,占保护区总面积的28.6%,分离度指数和片断化程度指数分别为0.365和0.912;适宜白颈长尾雉越冬的栖息地斑块有514个,总面积2755 hm²,占保护区总面积的23.8%,分离度指数和片断化程度指数分别为0.443和0.939。官山保护区白颈长尾雉栖息地片断化较严重,片断化现象在白颈长尾雉越冬期加剧。因此,迫切需要采取措施白颈长尾雉现存栖息地进行保护,特别是要高度重视其越冬栖息地的保护。     

土壤理化性质驱动烤烟根际细菌群落的组配及其共现性网络互作

【目的】解析土壤微生物在植物根际的组配机制对于认识和维护农田生态系统的稳定性至关重要。【方法】通过Illumina高通量测序和生物信息学分析方法明确了我国主要种植烟草生态区烤烟根际土壤细菌群落与土壤理化性质的互作关系。【结果】烤烟根际细菌类群主要为放线菌纲(Actinobacteria)、α-变形菌纲(Alphaproteobacteria)、γ-变形菌纲(Gammaproteobacteria)和嗜热油菌纲(Thermoleophilia)。细菌群落组成按生态区聚类,且样本空间距离和细菌群落相似度显著负相关。共现性网络分析表明,烤烟根际细菌群落间协同作用大于拮抗作用,武陵秦巴生态区、黄淮平原生态区、南岭丘陵生态区和沂蒙丘陵生态区细菌群落高度模块化,小单胞菌属(Micromonospora)为南岭丘陵生态区和黄淮生态区细菌共现性网络的网络中心,Bryobacter和气单胞菌属(Arenimonas)为南岭丘陵生态区细菌网络的模块核心,其菌群特性而非相对丰度决定了其在稳定细菌网络中的重要作用。冗余分析结果证实pH、有效铁、交换性镁和有效锰能显著影响烤烟根际细菌群落结构。【结论】烤烟根际细...     

Do isolation and local habitat jointly limit the structure of stream invertebrate assemblages?

1. Both local and regional processes simultaneously control species assemblages depending on spatial habitat configuration. In dendritic networks like streams, the unique spatial arrangement of habitats produces various combinations of local habitat size and isolation. Stream invertebrate assemblages could therefore be controlled by different combinations of local and regional processes, depending on their location in the network. 2. Using quantile regression, we investigated how local habitat size, local environmental conditions and spatial isolation influenced variation in assemblage composition. Adult Trichoptera and benthic macroinvertebrate assemblages were represented by non‐metric multidimensional scaling (NMDS) ordination scores, as were local environmental conditions, in four headwater stream networks in New Zealand. 3. With increasing local habitat size, there was a decrease in variation in assemblage composition (NMDS scores) of both adult Trichoptera and benthic macroinvertebrates. This relationship between habitat size and assemblage variation was related to local habitat conditions at the upper limit of assemblage variability and spatial isolation at the lower limit of assemblage variability, for both adult Trichoptera and benthic assemblages, indicating joint local and regional controls on stream invertebrate assemblages. 4. The relationships between local assemblages and their neighbours, based on community similarity scores, differed between benthic macroinvertebrates and adult Trichoptera. For benthic assemblages, the larger the stream, the more similar assemblages were to neighbouring assemblages, whereas there was no consistent relationship between assemblage similarity and stream size for adult Trichoptera. This difference in structuring could be attributed to contrasting spatial influences linked to the different dispersal modes of adults and larvae. However, because adult and benthic assemblages are not independent, the influence of life stage on spatial distribution is difficult to determine (i.e. it is essentially a ‘chicken and egg’ argument). 5. Overall, our approach using quantile regression to evaluate limit responses, rather than regressions on means, has highlighted the joint importance of local habitat and spatial processes in structuring stream invertebrate assemblages. Furthermore, we have provided evidence for the importance of the spatial network arrangement and interactions between life stages and dispersal processes, in structuring stream assemblages.     

Interhabitat migration of juvenile Atlantic salmon in a Newfoundland river system, Canada

Migrations of juvenile Atlantic salmon between habitats (both fluvial and lacustrine) were studied in a Newfoundland river system from May through September. Salmon parr showed poor site fidelity in fluvial habitats, and high rates of migration, especially in spring-early summer. Most habitat shifts were upstream from fluvial habitats to a lake at the head of a small tributary. In September, 10% of the salmon parr caught in the lake ( n =275) had been marked in the main stem of the river or in the tributary stream (total n =641). The abundance of parr in the lake increased in May-June, then declined gradually to September. Most of the lacustrine immigrants were 1+ parr. Mature males were found amongst the autumnal emigrants. Salmon parr in the lake grew larger than those in the river, and lacustrine smolts captured in the lake were larger than those caught at the mouth of the river.     

Simple predictions of instream habitat model outputs for fish habitat guilds in large streams

1. In the context of a generalised modification of hydraulic conditions in medium to large streams, modelling the impacts of stream regulation on fish communities in multiple streams is an important challenge for basic and applied freshwater ecology. Conventional instream habitat models such as PHABSIM link a hydraulic model with preference curves for various species to estimate habitat value changes with discharge in stream reaches. Despite world‐wide applications, they have been scarcely used in multiple sites with multiple species. 2. We assigned 21 size classes of European fish species to four habitat guilds (cluster analysis grouping size classes with comparable microhabitat preference curves). Then, we ran a conventional instream habitat model on 28 French stream reaches belonging to the `barbel zone', to estimate habitat values versus discharge curves for the 21 size classes. We summarised the outputs as mean habitat values for guilds, and tested if they were predictable from average characteristics of reaches (discharge, depth, width, particle size). 3. As was obtained elsewhere for populations, habitat values for guilds were strongly related to average, dimensionless characteristics of reaches. The Reynolds number of reaches, equivalent to a discharge per width unit, reflected most of the discharge‐dependent changes in habitat values (within reaches). In particular, habitat values of species preferring bank (respectively midstream) microhabitats decreased (respectively increased) with increasing Reynolds number. The Froude number at median discharge was the major predictor of reach‐dependent but discharge‐independent variations in habitat values. Habitat values of species preferring riffle versus pool or bank microhabitats were higher in reaches with high Froude numbers. These relationships were consistent with existing knowledge on the different species. 4. Such results suggest that the input variables required to estimate habitat values for fish communities can be greatly simplified, as illustrated by a general estimation of the sensitivity of species preferring midstream habitats to discharge changes in any reach. Cost‐efficient alternatives to conventional instream habitat models should facilitate their validation in multiple sites, a point that remains critical in instream habitat modelling of fish communities.     

土地利用变化对生境网络的影响——以苏锡常地区白鹭为例

生境网络对于物种更具有生态意义。研究土地利用变化对生境网络的影响,对破碎景观中种群的扩散和迁徙至关重要。研究结果有助于区域生境网络的恢复和完善,从物种的角度而非景观结构的角度优化生态网络。以城市化快速发展、土地利用变化明显的苏锡常地区为研究区域,优势湿地鸟类白鹭为代表物种,构建物种生境斑块约束条件概念模型,提出按照物种生活习性特征划分、选择生境斑块的方法,并从斑块和网络结构两个视角分析了土地利用变化对生境网络的影响。结果表明:(1)2000—2010年研究区白鹭生境的适宜地类总面积虽有所增加,但主要由于大量新增线性人为干扰致使白鹭生境网络质量下降;(2)白鹭生境网络在研究区不是全区覆盖的回路,基本由宜兴—溧阳片、无锡滨湖片、苏州吴中片和苏州阳澄湖片4个小片网构成,其完整程度按照宜溧片、滨湖片、吴中片、阳澄湖片降次排列;至2010年,宜溧片破坏最为严重,滨湖片和吴中片次之,阳澄湖片受破坏程度相对最弱。总体上,白鹭生境境况在10年间恶化明显,土地利用变化朝着不利于白鹭持续生存的方向发展。     

基于生境组团化分析与景观廊道模拟的南京市白鹭生境网络构建与优化

保持生境连通性是全球生物多样性保护面临的主要挑战之一。生境网络构建与优化是一种积极主动的景观策略,但其成效取决于异质性景观背景下生境分布格局与物种响应。以南京市为例、白鹭为目标物种,开展了基于生境组团化分析与景观廊道(LSCorridors)模拟的生境网络构建与优化研究。通过整合生境适宜性评价、干扰度评价、最大熵(MaxEnt)模型模拟,实现了物种生境源地综合识别;利用景观连通性指标与核密度分析,识别了物种生境分布的组团化格局;在最小成本路径(LCPs)的基础上,定义了优化新增型与提升型两类廊道,并从物种感知与适应性变化出发,应用LSCorridors软件模拟了这两类目标优化廊道的多重随机路径及其空间范围。结果表明,南京市白鹭生境斑块共计428个,总面积达31525.75 hm²,主要是林地与水域,具有较为明显的破碎化和局部集聚特征,九大生境组团以南京长江段水域斑块为轴,沿两侧分布,彼此联系比较薄弱;最佳距离阈值4.5 km内,识别LCPs共907条,总长度1548.59 km,平均较短、分布紧凑,主要位于各生境组团内部,但仅少数连接着不同生境组团;确定的8条优化新增型廊道和10条优化提升型廊道,其LSCorridors模拟结果与LCPs存在空间偏差,前者更符合现实进而有益于避免保护低效和促进多类型、差异化的优化措施制定。研究成果能为面向生物多样性保护的南京市生境网络保护以及重点生态廊道的规划实践提供决策参考。