Himalayan musk deer (Moshcus leucogaster) behavior at latrine sites and their implications in conservation

Elusive species often use latrines which also serves as communication and information hubs. Thus, studying behavior at latrines may provide critical insights into the species’ ecology and behavior. While it is established that musk deer use latrines for defecating, very little is known about the endangered Himalayan musk deer (Moschus leucogaster) and their latrines. We examined musk deer behavior from the various video clips lasting 238 min altogether, captured at latrine sites during both breeding and non‐breeding seasons in the Annapurna Conservation Area of Nepal. A total of 428 visits by musk deer and 479 behavioral events by them were captured. We constructed an ethogram to describe musk deer behavior and compared behavior across individuals and sex using parametric and non‐parametric tests. We found that musk deer are crepuscular and nocturnal animals. Both male and female musk deer repeatedly and independently visited shared latrine sites as well as exclusively used latrine sites. The proportion of male musk deer visited latrine sites were significantly higher than that of female musk deer. Hence, male musk deer were found more active (>2 times) than females during both seasons. The most frequently observed behavioral activities at the latrine sites were defecating, sniffing and browsing, followed by scrapping and covering, and ignoring the latrine sites. The defecating and sniffing activity were performed throughout breeding and non‐breeding seasons to establish communication among peers and to claim territory. Based on the behaviors observed at the latrine sites, we can presume that Himalayan musk deer likely use latrines to convey various messages, including personality, maturity, sexual status, and territory marking among conspecifics. These findings of this study can be used for the conservation of musk deer in its natural habitat and replicated in captivity to enhance breeding performance that improves long‐term conservation prospects for this species.     

Six microsatellite loci in forest musk deer,Moschus berezovskii

Through an improved enrichment protocol, 20 microsatellite loci were isolated and characterized in an endangered animal, forest musk deer (Moschus berezovskii). In which, six loci showed high polymorphism with five to 13 alleles in 48 sampled individuals. The observed and expected heterozygosities were 0.362–0.955 and 0.784–0.906, respectively. The average polymorphism information content (PIC) was 0.8108 in these six microsatellites and they could be the valuable genetic markers for further investigation of forest musk deer species.     

Genetic diversity of captive forest musk deer (Moschus berezovskii) inferred from the mitochondrial DNA control region

Forest musk deer ( Moschus berezovskii ) were once distributed widely in China. However, wild populations have declined dramatically because of poaching and habitat loss. Captive breeding populations have been established for several decades, but the genetic backgrounds of most captive populations were unclear and the population sizes increased very slowly. To provide useful information for conservation and management of this species, we investigated the genetic diversity and population structure of forest musk deer by analysing a 582-bp fragment of the mitochondrial DNA (mtDNA) control region (CR) in three captive breeding populations in Sichuan Province, China. Ninety-four variable sites and 27 haplotypes were observed in 109 individuals, and the nucleotide and haplotype diversities were relatively high compared with those of other endangered mammals. Of the three investigated populations, the Maerkang population had the highest nucleotide diversity ( π  = 0.0568), haplotype diversity ( h  =   0.836) and average intra-population genetic distance (0.062). The analysis of molecular variance demonstrated that most variation occurred within samples and that there was significant differentiation of the three populations. Estimates of gene flow indicated that there were few genetic exchanges among the three populations. Building pedigree records and increasing gene flow between populations will be helpful for conserving these populations and this species.     

Major histocompatibility complex class II genetic variation in forest musk deer (Moschus berezovskii) in China

The major histocompatibility complex (MHC) plays an important role in the immune system of vertebrates. We used the second exon of four MHC class II genes (DRA, DQA1, DQA2 and DRB3) to assess the overall MHC variation in forest musk deer (Moschus berezovskii). We also compared the MHC variation in captive and wild populations. We observed 22 alleles at four loci (four at DRA, four at DQA1, four at DQA2 and 10 at DRB3), 15 of which were newly identified alleles. Results suggest that forest musk deer maintain relatively high MHC variation, which may result from balancing selection. Moreover, considerable diversity was observed at the DRA locus. We found a high frequency of Mobe‐DRA*02, Mobe‐DQA1*01 and Mobe‐DQA2*05 alleles, which may be important for pathogen resistance. A Ewens–Watterson test showed that the DRB3 locus in the wild population had experienced recent balancing selection. We detected a small divergence at the DRA locus, suggesting the effect of weak positive selection on the DRA gene. Alternatively, this locus may be young and not yet adapted a wide spectrum of alleles for pathogen resistance. The significant heterozygosity deficit observed at the DQA1 and DRB3 loci in the captive population and at all four loci in the wild population may be the result of a population bottleneck. Additionally, MHC genetic diversity was higher in the wild population than in the captive, suggesting that the wild population may have the ability to respond to a wider range of pathogens.     

林麝幼体的换毛序和胎毛、夏毛、冬毛的形态

被毛是哺乳动物最主要的特征之一,有关动物换毛序与环境关系的研究,是动物生态学研究的一个重要方面。从1853年Browne开始研究毛发结构以来,人们对毛发的形态学、分类学和种属关系等方面的研究已开展了大量工作,特别是随着电镜技术的应用,这些方面的工作在逐渐深入(曹汉民等,19     

原麝和林麝冬夏两季粪便真菌菌群多样性

肠道微生物群对宿主健康的影响取决于饮食环境和宿主等因素.本研究通过Illumina MiSeq平台对冬、夏两季林麝和原麝粪便真菌ITS1区段进行测序,探究原麝和林麝肠道真菌菌群结构特性及季节因素对其多样性的影响.结果 表明,林麝和原麝肠道真菌组成中子囊菌门Ascomycota均为优势菌门,它们的相对丰度随物种和季节因素...     

Habitat selection by endangered Himalayan musk deer (Moschus chrysogaster) and impacts of livestock grazing in Nepal Himalaya: Implications for conservation

Habitat management within and outside protected areas is a key to effective conservation of wildlife. This is particularly vital for declining wildlife populations within the boundary of conservation areas, while sharing their potential habitat range with foraging livestock. In an effort to understand the habitat selection by Himalayan musk deer (Moschus chrysogaster) and explore any potential impacts of livestock grazing, we conducted the present study in a conservation area of central Nepal Himalaya. We recorded data on musk deer and livestock presence and absence (based on signs of fecal pellet, footprint, and resting site) along the elevational transect with associated topographic features (elevation, slope, aspect, distance to water, and vantage point distance) and vegetation features (tree spp., shrub spp., herb spp., and canopy-cover). Using logistic regression model we found that elevation, aspect, canopy-cover, and tree spp. in the area significantly affect the likelihood of habitat selection by musk deer. In particular, they selected the southern aspect of the area with elevation ≥ 3529 m, canopy-cover ≥ 42%, and with stands of Pinus spp. and Abies spp. Slope and canopy-cover significantly affected the foraging area selection by livestock. They selected the gentler slopes in the northern aspect of the area with altitude < 3529 m and canopy-cover < 42%. Also, presence of one group of herbivore (i.e. musk deer and livestock) was not found to affect the likelihood of habitat selection by the other group. These independent habitat selections are possibly the responses to morphological and behavioral adaptations than to impacts and interactions between these two groups of herbivores. We suggest to avoid any disturbances and livestock grazing on the area that disrupt the resources and conditions likely selected and occupied by musk deer population.     

The reproductive performance of female Forest musk deer (Moschus berezovskii) in captivity

Reproductive performance of 750 adult female Forest musk deer (FMD, Moschus berezovskii) was monitored (from 2005 to 2009) on two Forest musk deer farms in Sichuan province, China. The mean (± SEM) lengths of the estrous cycle, pregnancy, and consecutive fawning intervals were 17.5 ± 0.8 d (n = 64), 182.9 ± 0.8 d (n =190), and 363.2 ± 2.4 d (n = 120), respectively. Copulation occurred from the end of October to early March, with the majority (84.1 ± 1.9%) during November and December (P < 0.05). The fawning rate was 68.7 ± 2.2% in yearling hinds and 73.3 ± 1.3% in adult hinds. Fawning occurred from the end of April to early September, with the majority (88. 9 ± 2.2%) during May and June (P < 0.005), including a peak in May (52.0 ± 1.0%). Yearling hinds fawned later (7.3 ± 1.8 d) than adult hinds. Rates of premature delivery and dystocia were 2.7 ± 0.4 and 2.0 ± 0.3%, respectively. There was a 1.07:1 female-to-male ratio at birth (P > 0.05), with 67.7% twins, but only two cases of triplets and one set of quadruplets among 537 fawns. Birth weight averaged 518.7 ± 10.3 g, ranging from 304 to 775 g (n = 240), with male fawns slightly heavier than females (521.1 ± 14.8 vs 516.9 ± 14.3 g). Postnatal and pre-weaning mortality rates were 25.0 ± 1.2 and 17.9 ± 3.1%, respectively. Postnatal mortality and urinary calculus were much more common in male fawns (P < 0.01). The mortality rate due to suppuration and dyspepsia were different (P < 0.001) between postnatal and pre-weaning periods. Due to higher mortality of male fawns, the adult sex ratio was significantly female-biased. In conclusion, captive FMD had similar seasonal patterns of copulation and fawning as wild FMD and other musk deer species.     

Species dilemma of musk deer (Moschus spp) in India: molecular data on cytochrome c oxidase I suggests distinct genetic lineage in Uttarakhand compared to other Moschus species

Musk deer are of high conservation priority owing to poaching pressure because of its musk pod. Representation of musk deer status using genetics is poorly documented in India, and it is not confirmed as to how many species of musk deer are present. We characterize for the first time, the genetic diversity of musk deer from Uttarakhand using Cytochrome Oxidase sub-unit (COI) gene (486?bp) and compared with the data available for other species. Results revealed the presence of six haplotypes in the Uttarakhand population amongst 17 sequences. Of these, 12 sequences shared the single haplotype. The intra-species sequences divergence was 0.003–0.017, whereas divergence with other species of musk deer was 0.071–0.081. Bayesian phylogenetic tree revealed that samples from Uttarakhand formed a separate clade with respect to other species of musk deer, whereas three species distributed in China clustered in the same clade and showed low sequences divergence, i.e., 0.002–0.061. Because of different ecomorph reported, we suggest using the barcoding based approach for inter and intra-species distinction and delineating species boundaries across the range for effective conservation. Besides, systematic classification, DNA barcoding would also help in dealing wildlife offence cases for disposal of the legal report in court.     

Isolation and characterization of microsatellite loci from forest musk deer (Moschus berezovskii)

This study reported the isolation and characterization of eight polymorphic microsatellite loci in endangered forest musk deer Moschus berezovskii. An improved enrichment protocol was used to isolate microsatellites, and polymorphism was explored with samples from wild musk deer population collected in Miyalo of Sichuan Province in China. Approximately 70% of clones from the genomic library constructed in current study contained dinucleotide (AC) repeats. Eight microsatellite loci amplified were highly polymorphic within forest musk deer population. The number of alleles per locus ranged from 6 to 14, and the observed and expected heterozygosities ranged from 0.41 approximately 1.0 and from 0.8 approximately 0.9, respectively. The average polymorphic information content (PIC) value for these markers was 0.82. This demonstrated that the eight microsatellite loci developed here are highly polymorphic, and can be used as genetic markers for further investigation of musk deer. Also, the results showed that the musk deer distributed in Miyalo had a relatively higher level of genetic variation.     

圈养马麝的个性分类

本研究在甘肃兴隆山国家级自然保护区马麝繁育场展开,分别于2012年7月和2013年8月,针对374只圈养马麝,采用基于量表的个性评价法进行评价调查。结果表明:可建立包含17个个性项目的圈养马麝个性量表,因子分析显示每个项目公因子方差和载荷均大于0. 4,各因子累计贡献率为60. 33%,表明此量表具有较好的结构效度。此外Cronbach’sα系数为0. 787,表明量表具有较高的内部一致性信度,量表设计合理;因子分析和聚类分析结果显示,可将圈养马麝划分为五大个性维度:侵略性、社会性、刻板性、温顺性、活跃性。研究发现,圈养马麝个性维度与野生个体的个性类型划分存在差异,主要是受圈养条件和人为干扰等影响。圈养马麝个性量表和五大个性维度的建立对指导马麝繁育管理具有重要实践价值,填补了马麝个性研究的空缺,并为进一步进行麝类动物个性研究奠定了基础。另外,此类个性层次研究方法具有较好区分度,可为其他动物个性的初期研究提供参考。     

Modeling and mapping the current and future climatic-niche of endangered Himalayan musk deer

Identification of geographical space enveloped by suitable climatic conditions (i.e., climatic niche) that support species survival over space and time is crucial in conservation biogeography. Numerous algorithms (e.g., Maxent, GARP) with increasing accuracy have been devised and are being employed to overcome the challenges of forecasting climatic niche of species with incomplete information. The current study was conducted to map the distribution of current and future climatic niche of endangered Himalayan musk deer, a species endemic to Asia. Maxent and GARP modeling algorithms were individually employed to forecast current and future climatic niche of the species using randomly collected occurrence records of the species and bioclimatic variables with 30″ resolution from ‘WorldClim’ datasets. Both the modeling processes performed optimally with regard to AUC and TSS values and forecasted an increase/expansion of climatically-suitable geographical space in the future. A final climatic niche distribution map was produced by combining the binary maps generated from each of the processes to produce a relatively realistic and potentially accurate distribution of climatic niche of the species over space and time. Conservation of forecasted suitable geographical space is recommended and future survey efforts for potentially unexplored populations of the species in the forecasted suitable area are suggested.     

Complete mitogenome of Kashmir musk deer (Moschus cupreus) and its comparative phylogenetic relationships

Molecular Biology Reports - Kashmir musk deer, Moschus cupreus (KMD) is one the most threatened species endemic to the Himalayan region of Kashmir, Pakistan and Afghanistan. Herein, we have...     

甘肃兴隆山养麝场圈养高山麝的产香量

兴隆山国家级自然保护区(E103。50'-104。10',N35。38-58')位于甘肃省兰州市榆中县境内,是高山麝(Moschus chrysogaster)的自然分布区.     

凉山山系林麝夏季利用生境特征

采用样线法对位于四川凉山山系的美姑大风顶自然保护区林麝(Moschus ber-ezovskii)的夏季利用生境特征进行了调查,并对利用生境样地(n=44)和非利用样地(n=209)的生境变量进行了比较.结果表明:大风顶保护区的林麝夏季利用生境的郁闭度(32.4%±1.9%)、灌木盖度(27.1%±2.4%)及竹子盖度...     

圈养林麝的活跃性及与社会亲和度的关系

采用扫描取样和焦点动物取样法对四川马尔康林麝繁育场的45头圈养林麝进行行为取样,以其非静息行为的发生率作为活跃性指标,以社会亲和行为的发生强度作为社会亲和度指标,分析圈养林麝活跃性与其性别、圈群密度及社会亲和度的关系。结果表明:圈群密度和社会亲和度对圈养林麝的活跃性有显著影响(P < 0.05),但活跃性雌雄差异不显著(P > 0.05)。与高密度圈群的林麝(0.25 ± 0.021, n=32)相比,低密度圈群中的个体更活跃(0.40 ± 0.022, n = 4);活跃性与社会亲和度之间显著相关(r = 0.390, P = 0.01),活跃性较高个体倾向于展现高的社会亲和度。建议麝场在进行麝群构建时,充分考虑林麝个体的活跃性差异及与圈群密度的关系,以提高圈群稳定性和驯养生产力。     

圈养马麝刻板行为表达与粪样类固醇激素的关系

2017年7月1日-8月31日及2018年6月1日-7月31日,在甘肃兴隆山保护区马麝繁育中心,采用焦点取样法和连续记录法进行了圈养马麝的刻板行为取样,采集同期粪样,并用放射免疫分析法（RIA）检测粪样中肾上腺皮质醇、睾酮及雌二醇激素的水平,分析了圈养马麝刻板行为表达与上述3种激素水平的关系。结果显示,展现刻板行为的圈养马麝的皮质醇水平（111.099 ± 16.231）ng/g略高于无刻板行为表达的马麝（95.640± 9.738） ng/g,差异未达显著（P> 0.05）;展现刻板行为雄麝的睾酮水平（135.900± 21.582）ng/g略高于无刻板行为的雄麝（108.182 ± 9.689） ng/g,差异也不显著（P> 0.05）;展现刻板行为雌麝的雌二醇水平（0.445 ± 0.116）ng/g显著低于无刻板行为雌麝（10.843 ± 1.142）ng/g（P< 0.05）。研究结果表明,圈养雄性马麝的刻板行为表达与其类固醇激素水平不相关;而雌麝的刻板行为表达与雌二醇分泌显著负相关,这与其繁殖及健康状况有关。在麝类驯养实践中,可将粪样类固醇激素水平（尤其是雌二醇）作为其受胁迫水平及行为健康的监测指标。     

圈养林麝社会等级与粪样类固醇激素水平的关系

动物社群的社会等级可对个体的资源分配、社群稳定及个体的行为对策产生重要影响,圈养动物的类固醇激素水平与饲养管理有关,可反映动物的社群紧张水平.深入理解圈养动物的社会等级与其类固醇激素水平的关系是进行濒危动物迁地保育和成功驯养的基础.2018年6月15日—8月15日,用焦点取样法对四川马尔康林麝繁育场的25头林麝进行了冲...     

The essential differences in microbial and chemical components of musk of different qualities secreted by captive male forest musk deer (Moschus berezovskii)

Musk is a precious raw material and ingredient in Chinese traditional medicine. The production of unqualified musk has become a puzzling problem in forest musk deer (FMD) breeding. However, what the essential differences between so-called unqualified musk and mature qualified musk have not yet been elucidated. In this study, 12 musk samples were collected and separated into two groups according to their external properties. One group is white or black cream-like secretion with sour or unpleasant odour (MM); the other group is brown or blackish brown solid secretion with pleasant fragrance (DM). Next-generation sequencing and gas chromatography-mass spectrometry were used to explore the essential differences between the DM and MM groups in microbial and chemical compositions. The results indicate that the DM group has more heterogenous microbial structure but simpler relationships among microbial communities. LEfSe analysis showed that 14 taxa at the genus level could be used to distinguish the DM and MM groups and Bacillus, Paracoccus, tenoteophomonas, Mycobacterium and Leuconostoc were more abundant in the DM group (P < 0.05). In addition, six compounds were identified to specifically distinguish the DM and MM groups under the OPLS-DA model. PICRUSt analysis revealed that metabolic pathways such as carbohydrate metabolism, nucleotide metabolism, energy metabolism, transport and catabolism were enriched in the DM group. All these findings of differences in microbiota and chemical compositions would provide potential clues for MM quality improvement and new evidence for the scientific establishment of a quality evaluation standard for musk.     

Molecular polymorphism of MHC-DRB gene and genetic diversity analysis of captive forest musk deer (Moschus berezovskii)

The major histocompatibility complex (MHC) is one of the most important elements in immune system for nearly all vertebrates, and is thought to be essential for an organism to recognize foreign molecules. In this study, we investigated the MHC variation in 51 forest musk deer (Moschus berezovskii) collected from three captive populations in Sichuan Province, China. Seventeen haplotypes were isolated from the 51 samples. A total of 51 mutation sites were identified and yielded a nucleotide diversity of 0.056. These haplotype sequences possessed 83 putative amino acid sites, including 24 PBR sites (peptide binding region) and 59 non-PBR sites. Out of 24 PBR sites, 15 codons showed variation (0.625), while 12 codons showed variation (0.203) in 59 non-PBR sites. Non-synonymous substitutions primarily occurred in PBR, with analyses suggesting that the Mobe-DRB gene had undergone strong positive selection during their evolution. Compared with that of some other endangered species, the forest musk deer had relatively high level of MHC diversity. Our results suggested that the MHC diversity characteristic of captive forest musk deer populations might be not responsible for their high morbidity of abscess disease.