Rice leaf extract synthesized silver nanoparticles: An in vitro fungicidal evaluation against Rhizoctonia solani,the causative agent of sheath blight disease in rice

Silver nanoparticles (Ag NP) were synthesized using rice leaf extract and optimized synthetic conditions were found to be 0.4 % leaf extract, 0.6 mM AgNO₃ and 30 min of autoclaving. Produced NP were characterized using UV–vis, DLS, zeta potential, XRD, TEM and FTIR. Ag NP formation was established from UV–vis spectra and NP showed zeta potential value of −27.4 mV. NP were spherical, polydisperse and average size was 16.5 ± 6.2 nm. Antifungal activity of Ag NP was assessed by poisoned food technique and resazurin broth dilution against mycelium and sclerotia of fungus R. solani, the causative agent of sheath blight disease in rice. Results confirmed effective hyphal growth inhibition and % growth inhibition was dose dependent (2.5–10 μg/mL). Ag NP showed enhanced mycelial inhibition (81.7–96.7 %) at 10 μg/mL. MIC values of Ag NP were in the range of 5–10 and 15–20 μg/mL towards fungal mycelium and sclerotia, respectively. Ag NP treatment (20 μg/mL) completely inhibited the disease incidence at 20 μg/mL. Ag NP treatment (10 μg/mL) caused 1.3 and 1.5 times enhancement in seedling vigor index. Hence, Ag NP can be utilized towards management and control of various fungal diseases of crops.     

广西玉米种质资源对纹枯病的抗性鉴定

在人工接种条件下,对860份玉米材料进行了纹枯病抗性鉴定和评价,旨在为进一步开展玉米纹枯病抗性育种和分子生物学研究奠定基础。结果显示,在鉴定的860份玉米材料中,没有发现免疫的材料,高抗、抗、中抗、感和高感的比例分别为3．49％、28．60％、26．16％、10．35％和31．40％;在农家种、群体种和杂交种（组合）等杂合体中,抗病材料所占比例较大,而自交系等纯合体中,感病材料所占比例较大,表明玉米杂合体种质资源材料中可能蕴藏着不同的抗纹枯病基因,特别是广西农家种中可能存在对纹枯病具有稳定抗性的材料,值得进一步研究和利用。     

玉米种质资源对纹枯病的抗性鉴定与评价

在人工接种条件下,对国内常用的285份玉米种质资源进行抗纹枯病大田鉴定与评价,未发现免疫材料,抗病材料很少.高抗、抗和中抗材料的比例分别为1.0%、3.2%、13.7%;绝大多数材料属于感病或高感,分别占29.8%、52.3%.株高、主穗位高、主穗位高/株高之比值与病情指数呈负相关,病斑高、病斑高/株高、病斑高/主穗位高之比值与病情指数呈正相关,可以将病斑高度与主穗位高度的比值作为抗性鉴定与评价指标之一.采用带菌麦粒在拔节中后期定位接种,以病斑到达的叶鞘位作为病情和抗性评价体系是较为准确和规范的方法.     

Over-expression of the cloned rice thaumatin-like protein (PR-5) gene in transgenic rice plants enhances environmental friendly resistance to Rhizoctonia solani causing sheath blight disease

 A 1.1-kb DNA fragment containing the coding region of a thaumatin-like protein (TLP-D34), a member of the PR-5 group, was cloned into the rice transformation vector pGL2, under the control of the CaMV 35S promoter. The Indica rice cultivars, ‘Chinsurah Boro II’, ‘IR72’, and ‘IR51500’ were transformed with the tlp gene construct by PEG-mediated direct gene transfer to protoplasts and by biolistic transformation using immature embryos. The presence of the chimeric gene in T₀, T₁, and T₂ transgenic plants was detected by Southern blot analysis. The presence of the expected 23-kDa TLP in transgenic plants was confirmed by Western blot analysis and by staining with Coomassie Brilliant Blue. Bioassays of transgenic plants challenged with the sheath blight pathogen, Rhizoctonia solani, indicated that over-expression of TLP resulted in enhanced resistance compared to control plants. Received: 11 August 1998 / Accepted: 26 August 1998     

1株拮抗水稻纹枯病菌鼠乳杆菌的筛选与鉴定

采用平板对峙法从浙江省金华市水稻田土壤中筛选获得1株拮抗水稻纹枯病菌的细菌QT-0304菌株,最大拮抗带宽达到20 mm。根据形态特征、生理生化特征、16S rRNA基因比对及进化树构树分析,鉴定QT-0304菌株为鼠乳杆菌（Lactobacillus murinus）。抗菌谱实验结果表明：QT-0304菌株对苹果腐烂病菌（Valsa mali）和杨树溃疡病病菌（ Botryosphaeria dothidea）均有较好的抑制作用,拮抗带宽分别达到34.5 mm和23.0 mm。     

Characterization of antimicrobial peptides against a US strain of the rice pathogen Rhizoctonia solani

AIM: To identify antimicrobial peptides with high lytic activity against Rhizoctonia solani strain LR172, causal agent of rice sheath blight and aerial blight of soyabeans in the US. METHODS AND RESULTS: Among 12 natural and synthetic antimicrobial peptides tested in vitro, the wheat-seed peptide, purothionin, showed the strongest inhibitory activity that was similar to the antifungal antibiotics, nystatin and nikkomycin Z. Cecropin B, a natural peptide from cecropia moth, and synthetic peptide D4E1 produced the highest inhibitory activity against R. solani among linear peptides. Membrane permeabilization levels strongly correlated with antifungal activity of the peptides. Noticeable changes in membrane integrity were observed at concentrations of >/=0.5 micromol l(-1) for purothionin, 2 micromol l(-1) for cecropin B, D4E1, D2A21, melittin, and phor21, and 8 micromol l(-1) for magainin II and phor14. An increase of nuclear membrane permeabilization was observed in fungal cells treated with cecropin B, but not with purothionin. Diffusion of nuclear content was observed by fluorescent microscopy 10 min after adding a lethal concentration of cecropin B. Evaluation by electron microscopy confirmed severe cytoplasmic degradation and plasma membrane vesiculation. Purothionin and cecropin B were the most stable against proteolytic degradation when added to liquid cultures of R. solani. CONCLUSIONS: Purothionin, cecropin B, D4E1 and phor21 were shown to exhibit high in vitro lytic activity against R. solani strain LR172 for rice and soyabean. These peptides are greater than 16 amino acids long and rapidly increase fungal membrane permeabilization. Resistance to proteolysis is important for sufficient antifungal activity of antimicrobial peptides. SIGNIFICANCE AND IMPACT OF THE STUDY: Selected antimicrobial peptides offer an attractive alternative to traditional chemicals that could be utilized in molecular breeding to develop crops resistant to rice sheath blight and aerial blight of soyabean.     

Identification of functional candidate genes for drought tolerance in rice

Drought tolerance (DT) in rice is known to be controlled by many quantitative trait loci (QTLs) and involved differential expression of large numbers of genes, but linking QTLs with their underlying genes remains the most challenging issue in plant molecular biology. To shed some light on this issue, differential gene expression in response to PEG simulated drought in 3 unique genetic materials (a lowland rice, IR64 and its derived line, PD86 which has 11 introgressed DT QTLs, and a upland rice IRAT109) was investigated using a PCR-based subtractive hybridization strategy. More than 300 unique subtracted cDNA sequences, covering genes of diverse cellular activities and functions, were identified and confirmed by semi-quantitative and quantitative RT-PCR. Detailed bioinformatics analyses of the data revealed two interesting results. First, the levels and mechanisms of DT of the three rice lines were associated with the number and types of differentially expressed genes, suggesting different DT mechanisms in rice are controlled by different sets of genes and different metabolic pathways, and most differentially expressed genes under drought were able to contribute to DT. Second, there appeared a high correspondence in genomic location between DT QTLs and clusters of differentially expressed genes in rice, suggesting some DT QTLs may represent clusters of co-regulated and functionally related genes. Thus, differential gene expression analyses using genetically characterized materials can provide additional insights into the molecular basis of QTLs and convergent evidence to shortlist the candidate genes for target QTLs. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Bin-Ying Fu and Jian-Hua Xiong are contributed to this work equally.     

Biology,Epidemiology and Management of Rhizoctonia solani on Potato

Black scurf and stem canker on potato is an economically important disease complex, causing both quantitative and qualitative damage to potato crops which occurs in potato production areas throughout the world. The ribosomal DNA internal transcribed spacer sequence analysis is currently accepted and a commonly used method for classifying Rhizoctonia species and anastomosis groups (AGs). To date, 13 AGs have been recognized. The updated AG distribution in potato worldwide production areas confirm the status of AG‐3 as the most prevalent AG in potato and reflects the population dynamics of the pathogen probably due to global trading of tubers. As R. solani is a tuber‐ and soilborne pathogen, the ability to detect its levels in the seed tubers and in the soil and predict the potential damage is an important factor in controlling the disease. Effective disease management of Rhizoctonia disease requires implementation of an integrated disease management approach and knowledge of each of its stages. Although the most important control measures are cultural, chemical control (either by seed tuber‐ or in‐furrow treatments) is still an important tool in reducing the damages caused by R. solani.     

Morphological and pathological variations of rice sheath blight inciting south Indian Rhizoctonia solani isolates

Frequent assessment of pathogen diversity is one of the most important criteria in designing disease management programmes. A study on diversity of field isolates of Rhizoctonia solani from sheath blight-infected rice fields of south India has been carried out. A total of 236 R. solani isolates were obtained from 45 locations in the surveyed area. Sclerotial features such as colour, size and shape and distribution pattern were varying among isolates. However, no other morphological features found to differ among isolates. Majority of the R. solani isolates were fast growers as they attained complete mycelial growth within 2 days in a 90-mm Petri plate and the emergence of sclerotial structures was seen even in 4 days of incubation. Selected 10 R. solani isolates exhibited considerable variations in pathogenicity on three different rice cultivars. Vellai ponni was found to be the most susceptible rice cultivar to all the field isolates of R. solani.     

Involvement of secondary metabolites and extracellular lytic enzymes produced by Pseudomonas fluorescens in inhibition of Rhizoctonia solani, the rice sheath blight pathogen

Fourteen strains of Pseudomonas fluorescens isolated from rhizosphere soil of rice were tested for their antagonistic effect towards Rhizoctonia solani, the rice sheath blight fungus. Among them, PfMDU2 was the most effective in inhibiting mycelial growth of R. solani in vitro. Production of chitinase, beta-1,3-glucanase, siderophores, salicylic acid (SA) and hydrogen cyanide (HCN) by P. fluorescens strains was evaluated. The highest beta-1,3-glucanase activity, siderophore production, SA production and HCN production were recorded with PfMDU2. A significant relationship between the antagonistic potential of P. fluorescens against R. solani and its level of beta-1,3-glucanase, SA and HCN was observed.     

一株水稻纹枯菌拮抗细菌的分离与鉴定

【目的】从土壤中分离并鉴定水稻纹枯菌拮抗细菌,测定其体外抑菌和温室防治效果。【方法】采用系列稀释法和平板对峙法筛选拮抗细菌,基于形态、生理特征及16S rDNA序列鉴定其分类地位,采用种子细菌化温室试验测定其防效。【结果】从蔬菜根际土壤中筛选出一株纹枯菌拮抗细菌,命名为kwkjT4。菌株具有明显的体外抑菌活性,对水稻纹枯病的温室防效与井冈霉素相当,初步鉴定为假紫色色杆菌(Chromobacterium pseudoviolaceum)。最适生长条件为pH 7.0,温度32°C,培养时间为36 h;抑菌活性物质产生的最适培养条件为pH 6.0,温度28°C,培养时间为48 h;表明两者并不一致。【结论】kwkjT4菌株在水稻纹枯病的生物防治中具有潜在的应用价值。这是C.pseudoviolaceum拮抗纹枯菌的首次报道。     

A host-specific toxin of Rhizoctonia solani triggers superoxide dismutase (SOD) activity in rice

Changes in the activity of superoxide dismutase (SOD) in rice in response to treatment with Rhizoctonia solani toxin and/or R. solani elicitor were studied. Treatment of rice leaf sheaths with R. solani-toxin significantly increased the SOD activity within 12?h and the maximum enzyme activity was detected 36?h after treatment at which period a fourfold increase in SOD activity was recorded compared to control plants. Isozyme analysis indicated that five new SOD isozymes (SOD-1, SOD-3, SOD-6, SOD-7 and SOD-8) were induced in rice 1?–?2 days after toxin treatment. In elicitor-treated rice leaf sheaths, SOD-2 increased in activity 1?–?5 days after treatment. Pretreatment of rice leaf sheaths with elicitor suppressed the toxin-induced accumulation of SOD.     

水稻纹枯病时空生态位施药干扰研究

以施药作为干扰因子,研究干扰条件下水稻纹枯病菌的时间和空间生态位变化.结果表明,各施药处理与对照纹枯病菌的空间生态位存在差异,其中孕穗期施药+齐穗期施药和孕穗期施药+灌浆期施药两处理的空间生态位宽度指数分别为0.520、0.572,与对照的空间生态位宽度指数0.8563相差最大;分蘖盛期一次施药处理的空间生态位宽度指数为0.8577,与对照相差最小.各施药处理和对照的时间生态位宽度无显著差异,表明施药对纹枯病菌的时间生态位宽度影响不大.空间生态位宽度指数、病叶(鞘)率、病情指数及防治效果等计测结果表明,两次施药对病害的控制好于一次施药,其中两次施药中以孕穗期施药+齐穗期施药和孕穗期施药+灌浆期施药对病害的控制作用最强.施药不但压缩了水稻纹枯病菌的空间生态位宽度,限制了其在产量形成较为重要的上部叶位的扩张,而且压缩了水稻纹枯病菌的时间生态位宽度,限制了其在水稻产量形成时期的扩张.但施药只改变了病菌生态位的分布,调整压缩了水稻产量形成期的病害生态位,病菌生态位势的总和不变.     

Characterization of quantitative trait loci (QTLs) in cultivated rice contributing to field resistance to sheath blight (Rhizoctonia solani)

Sheath blight, caused by Rhizoctonia solani, is one of the most important diseases of rice. Despite extensive searches of the rice germ plasm, the major gene(s) which give complete resistance to the fungus have not been identified. However, there is much variation in quantitatively inherited resistance to R. solani, and this type of resistance can offer adequate protection against the pathogen under field conditions. Using 255 F₄ bulked populations from a cross between the susceptible variety Lemont and the resistant variety Teqing, 2 years of field disease evaluation and 113 well-distributed RFLP markers, we identified six quantitative trait loci (QTLs) contributing to resistance to R. solani. These QTLs are located on 6 of the 12 rice chromosomes and collectively explain approximately 60% of the genotypic variation or 47% of the phenotypic variation in the LemontxTeqing cross. One of these resistance QTLs (QSbr4a), which accounted for 6% of the genotypic variation in resistance to R. solani, appeared to be independent of associated morphological traits. The remaining five putative resistance loci (QSbr2a, QSbr3a, QSbr8a, QSbr9a and QSbr12a) all mapped to chromosomal regions also associated with increased plant height, three of which were also associated with QTLs causing later heading. This was consistent with the observation that heading date and plant height accounted for 47% of the genotypic variation in resistance to R. solani in this population. There were also weak associations between resistance to R. solani and leaf width, which were likely due to linkage with a QTL for this trait rather than to a physiological relationship.     

外源硅对纹枯病菌(Rhizoctonia solani)侵染下水稻叶片光合功能的改善

为了进一步探讨外源加硅增强水稻对纹枯病的抗性作用,以抗病品种91SP和感病品种Lemont为材料,研究了人工接种纹枯病菌条件下外源硅对水稻叶片叶绿素含量、光合作用、叶绿素荧光特性和MDA含量的影响。结果表明：（1）外源加硅能降低抗病品种91SP的纹枯病病级和病情指数,显著降低感病品种Lemont的病级和病情指数;（2）接种纹枯病菌后,水稻叶片叶绿素含量、净光合速率（Pn）、气孔导度（Gs）均明显降低,胞间CO2浓度（Ci）增大,而加硅处理的水稻叶片叶绿素含量、Pn、Gs不同程度增加,Ci有所降低;（3）接种纹枯病菌后,两个品种PSⅡ最大光化学效率（Fv／Fm）、PSⅡ有效光化学效率（Fv＇／Fm＇）、PSⅡ实际光化学效率（ФPSⅡ）、光化学猝灭系数（qP）和表观光合电子传递速率（ETR）均降低,非光化学猝灭系数（qNP）增大,而对于加硅处理的水稻叶片,上述荧光参数在纹枯病菌侵染条件下的变化均受到不同程度的抑制。（4）外源硅可不同程度地减缓纹枯病菌侵染引起的丙二醛（MDA）含量的增加,对感病品种Lemont的缓解作用要大于抗病品种91SP。可见,外源硅处理可以不同程度地缓解纹枯病菌侵染条件下非气孔因素引起的水稻叶片光合速率的下降以及对光合机构的破坏作用,提高光化学效率,改善叶片的光合功能,减轻叶片膜脂过氧化程度,增强水稻对纹枯病的抗性。     

Suppression of Rhizoctonia solani and induction of host plant resistance by Paenibacillus kribbensis PS04 towards controlling of rice sheath blight

We have identified a promising antagonistic micro-organism for suppressing Rhizoctonia solani and triggering induced resistance in rice. The isolate PS04 was identified as Paenibacillus kribbensis. PS04 and its crude metabolites showed inhibitory effects against R. solani both in vitro and in vivo, and with high stability against temperature and pH. Strain PS04 is a great biocontrol agent.     

Pyramiding transgenic resistance in elite indica rice cultivars against the sheath blight and bacterial blight

Elite indica rice cultivars were cotransformed with genes expressing a rice chitinase (chi11) and a thaumatin-like protein (tlp) conferring resistance to fungal pathogens and a serine-threonine kinase (Xa21) conferring bacterial blight resistance, through particle bombardment, with a view to pyramiding sheath blight and bacterial blight resistance. Molecular analyses of putative transgenic lines by polymerase chain reaction, Southern Blot hybridization, and Western Blotting revealed stable integration and expression of the transgenes in a few independent transgenic lines. Progeny analyses showed the stable inheritance of transgenes to their progeny. Coexpression of chitinase and thaumatin-like protein in the progenies of a transgenic Pusa Basmati1 line revealed an enhanced resistance to the sheath blight pathogen, Rhizoctonia solani, as compared to that in the lines expressing the individual genes. A transgenic Pusa Basmati1 line pyramided with chi11, tlp, and Xa21 showed an enhanced resistance to both sheath blight and bacterial blight. S. Maruthasalam and K. Kalpana have contributed to this article equally.     

Improving the Genome Annotation of Rhizoctonia solani Using Proteogenomics

Background Rhizoctonia solani is a pathogenic fungus that causes serious diseases in many crops, including rice, wheat, and soybeans. In crop production, it is very important to understand the pathogenicity of this fungus, which is still elusive. It might be helpful to comprehensively understand its genomic information using different genome annotation strategies.MethodsAiming to improve the genome annotation of R. solani, we performed a proteogenomic study based on the existing data. Based on our study, a total of 1060 newly identified genes, 36 revised genes, 139 single amino acid variants (SAAVs), 8 alternative splicing genes, and diverse post-translational modifications (PTMs) events were identified in R. solani AG3. Further functional annotation on these 1060 newly identified genes was performed through homology analysis with its 5 closest relative fungi.ResultsBased on this, 2 novel candidate pathogenic genes, which might be associated with pathogen-host interaction, were discovered. In addition, in order to increase the reliability and novelty of the newly identified genes in R. solani AG3, 1060 newly identified genes were compared with the newly published available R. solani genome sequences of AG1, AG2, AG4, AG5, AG6, and AG8. There are 490 homologous sequences. We combined the proteogenomic results with the genome alignment results and finally identified 570 novel genes in R. solani.ConclusionThese findings extended R. solani genome annotation and provided a wealth of resources for research on R. solani.