Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans

Fungi are prolific producers of secondary metabolites (SMs) that show a variety of biological activities. Recent advances in genome sequencing have shown that fungal genomes harbor far more SM gene clusters than are expressed under conventional laboratory conditions. Activation of these “silent” gene clusters is a major challenge, and many approaches have been taken to attempt to activate them and, thus, unlock the vast treasure chest of fungal SMs. This review will cover recent advances in genome mining of SMs in Aspergillus nidulans. We will also discuss current updates in gene annotation of A. nidulans and recent developments in A. nidulans as a molecular genetic system, both of which are essential for rapid and efficient experimental verification of SM gene clusters on a genome-wide scale. Finally, we will describe advances in the use of A. nidulans as a heterologous expression system to aid in the analysis of SM gene clusters from other fungal species that do not have an established molecular genetic system.     

Gene therapy for high-grade glioma: Current approaches and future directions

The treatment of high-grade gliomas remains difficult despite recent advances in surgery, radiotherapy and chemotherapy. True advances may emerge from the increasing understanding in molecular biology and discovery of novel mechanisms for the delivery of tumoricidal agents. In an attempt to overcome this formidable neoplasm, molecular approaches using gene therapy have been investigated clinically since 1992. The clinical trials have mainly been classified into three approaches: suicide gene therapy, immune gene therapy and oncolytic viral therapy. In this article, we review these approaches, which have been studied in previous and ongoing clinical trials.Key words: glioma, gene therapy, suicide gene, cytokine gene, oncolytic viruses     

Gene therapy for high-grade glioma

The treatment of high-grade gliomas remains difficult despite recent advances in surgery, radiotherapy, and chemotherapy. True advances may emerge from the increasing understanding in molecular biology and discovery of novel mechanisms for the delivery of tumoricidal agents. In an attempt to overcome this formidable neoplasm, molecular approaches using gene therapy have been investigated clinically since 1992. The clinical trials have mainly been classified into three approaches: suicide gene therapy, immune gene therapy and oncolytic viral therapy. In this article, we review these approaches, which have been studied in previous and ongoing clinical trials.     

The analysis of mammalian development using allelic isozyme variants

The past decade has seen an explosion of interest in mammalian embryos. Techniques of molecular and genetic analysis coupled with advances in in vitro culture and experimental manipulation of mammalian embryos have provided important insights into mechanisms of embryogenesis. Many of these recent advances have been facilitated by the use of allelic isozyme variants as autonomous cell markers or representative gene products. Investigations aimed at exploring cell lineages and cell commitment, the timing and regulation of gene expression, X chromosome inactivation, and cell interactions have depended on the availability of appropriate isozyme variants. Results from such experiments are summarized here in order to demonstrate the usefulness of this approach and to stimulate its wider application in developmental biology.     

Application of a systems approach to study developmental gene regulation

All cells in a multicellular organism contain the same genome, yet different cell types express different sets of genes. Recent advances in high throughput genomic technologies have opened up new opportunities to understand the gene regulatory network in diverse cell types in a genome-wide manner. Here, I discuss recent advances in experimental and computational approaches for the study of gene regulation in embryonic development from a systems perspective. This review is written for computational biologists who have an interest in studying developmental gene regulation through integrative analysis of gene expression, chromatin landscape, and signaling pathways. I highlight the utility of publicly available data and tools, as well as some common analysis approaches.     

Future prospects for treatment of hemoglobinopathies.

Strategies for the treatment of sickle cell anemia and beta-thalassemia are founded on the knowledge that these disorders result from structural or functional defects in an adult gene for which an intact fetal counterpart exists. During the past decade, several pharmacologic agents have been investigated for their potential to ameliorate sickle cell anemia and beta-thalassemia by increasing the synthesis of fetal hemoglobin in adults. Progress in understanding globin gene regulation is now being combined with advances in retrovirus-mediated gene transfer, and the once-distant goal of providing gene therapy for hemoglobinopathies is rapidly approaching reality.     

基因治疗研究进展

基因治疗研究的最新成就是非常鼓舞人心的,但是还有许多问题等待解决．首先回顾了近年来有关基因治疗的重要基础研究,包括基因导入技术的研究．后者是基础研究中最重要的课题之一,包括逆转录病毒载体和DNA病毒载体的应用,以及非病毒学方法．其次叙述了实验模型建立的研究．最后着重讨论了遗传病,癌症和其疾病的基因治疗的策略,特别着重在爱滋病和心血管疾病基因治疗的一些策略．     

Manipulating the Mouse Genome: New Approaches for the Dissection of Mouse Development

In mammals the molecular events that guide pattern formation during embryonic development have been difficult to characterize, partly because of difficulty in observing the development after implantation and in relating the phenotype of a dysmorphic mutation with a specific gene in which the mutation occurs. However, recent advances in the recombinant DNA technique and in manipulation techniques in mouse embryos have made it possible to clone genes involved in the process of development of mice. In addition, advances in human gene mapping and cloning have facilitated studies on mouse development. Thus, mice are now useful in research on developmental biology.     

Stability and degradation of mRNA

Differential mRNA stability plays an important role in the regulation of gene expression. Several recent advances have helped to define the general pathways by which mRNA is degraded in prokaryotic cells, although many details remain to be elucidated. Much less is known about the pathways of degradation in eukaryotic cells, but recent studies on specific systems have highlighted both differences from and similarities to prokaryotic pathways.     

巴斯德毕赤酵母表达系统研究进展

巴斯德毕赤酵母外源基因表达系统是近年来发展的一种优秀的真核表达系统 ,与传统的大肠杆菌和酿酒酵母表达体系相比 ,其具有的诸多优势使之研究价值及应用价值不断体现。综述了其在生物学特性、表达载体、基因整合、外源蛋白的分泌、诱导表达及发酵等方面的基础研究及新近研究进展。     

New therapies for muscular dystrophy: cautious optimism

The quest for a therapy for muscular dystrophy has been the driving force behind the past 40 years of advances in this field. Numerous results, such as the identification of satellite cells and gene mutations that are responsible for most forms of dystrophies, advances in gene transfer and modification technology and, more recently, stem cells, have fueled hopes. However, administering corticosteroids still remains the only effective treatment available. Several recent advances have uncovered a diversity of possible therapeutic approaches, from pharmacological treatments to gene therapy (exon-skipping and adeno-associated viruses) and cell therapy with different types of newly identified stem cells. Importantly, a combination of these strategies might greatly enhance the possibility of successful therapy.     

基因治疗的发展现状、问题和展望

基因治疗是一种新的治疗手段,可以治疗多种疾病,包括癌症、遗传性疾病、感染性疾病、心血管疾病和自身免疫性疾病。癌症基因治疗是基因治疗的主要应用领域。过去几年里,全球基因治疗临床试验取得了很大的进步。实际上,基因治疗也遇到了很多困难。未来,基因治疗的主要目标是发展安全和高效的基因导入系统,它们能将外源遗传物质靶向性地导入到特异的细胞。本文主要综述基因治疗所取得的突出进展、所遇到的困难和发展前景。     

Gene dynamics and nuclear architecture during differentiation

Abstract Recent advances have demonstrated that placing genes in a specific nuclear context plays an important role in the regulation of coordinated gene expression, thus adding an additional level of complexity to the mechanisms of gene regulation. Differentiation processes are characterized by dynamic changes in gene activation and silencing. These alterations are often accompanied by gene relocations in relation to other genomic regions or to nuclear compartments. Unraveling of mechanisms and dynamics of chromatin positioning will thus expand our knowledge about cellular differentiation.     

Gene therapy of the rheumatic diseases: 1998 to 2008

During the decade since the launch of Arthritis Research, the application of gene therapy to the rheumatic diseases has experienced the same vicissitudes as the field of gene therapy as a whole. There have been conceptual and technological advances and an increase in the number of clinical trials. However, funding has been unreliable and a small number of high-profile deaths in human trials, including one in an arthritis gene therapy trial, have provided ammunition to skeptics. Nevertheless, steady progress has been made in a number of applications, including rheumatoid arthritis and osteoarthritis, Sjögren syndrome, and lupus. Clinical trials in rheumatoid arthritis have progressed to phase II and have provided the first glimpses of possible efficacy. Two phase I protocols for osteoarthritis are under way. Proof of principle has been demonstrated in animal models of Sjögren syndrome and lupus. For certain indications, the major technological barriers to the development of genetic therapies seem to have been largely overcome. The translational research necessary to turn these advances into effective genetic medicines requires sustained funding and continuity of effort.     

家禽主要组织相容性复合体的研究进展

随着家禽基因组计划的开展,对家禽的主要组织相容性复合体（MHC）的研究取得了较大的进展。关于家禽MHC的各部分基因研究正在逐步深入,并且完成了MHC部分测序和染色体定位工作。 本文介绍近些年来对家禽MHC的基因结构和作用、与抗体的作用以及相关的基因组研究所取得的进展。人、小鼠及其他动物的相关研究结果将对家禽MHC研究的发展产生重要的影响。 Abstract:As the development of poultry genome project,it has been acquired many advances in the study of poultry MHC.At present,we have achieved some MHC sequences 、 locations of MHC on chromosome and some MHC gene functions.This article give a detailed introduction about gene structure of poultry MHC and its role in immune reaction、relation with antibody and advances in poultry genome about MHC.With the development of related research,how to use the result of the study more efficiently become more and more important to the poultry MHC study.     

基因治疗的应用及研究进展

基因治疗是一种新的治疗手段,可用于癌症、遗传性疾病、感染性疾病、心血管疾病和自身免疫性疾病等的治疗。癌症基因治疗是基因治疗的主要应用领域。过去几年里,全球基因治疗临床试验取得了很大的进步,也遇到了很多困难。未来基因治疗的主要目标是发展安全和高效的基因导入系统,它们能将外源遗传物质靶向性地导入特异的细胞。简要综述了基因治疗研究和应用的进展、困难及其发展前景。     

Plant pigments: the many faces of light perception

Good reviews have been published over the years regarding many aspects of plant response to light, such as important advances in understanding the molecular mechanisms of light perception, signaling and control of gene expression by the photoreceptors. Moreover, many efforts have been undertaken on the manipulation of these mechanisms to improve horticultural crop production. In this paper we present an overview about the photoreceptors, the relationship between their absorptive and reflective properties and their control of plant development as well perspectives focused on photomorphogenesis manipulation.