稳定同位素技术在鲨鱼摄食和洄游行为研究中的应用

随着稳定同位素分析技术的不断成熟,其在生态学领域中的应用也增长迅速,并成为动物摄食生态学的重要研究工具.鲨鱼因其在生物系统进化过程中的独特地位和海洋生态系统中的重要作用已成为海洋食物网研究的重点,然而国内针对鲨鱼摄食习性和洄游行为等方面的研究仍处于起步阶段.本文在总结了国内外鲨鱼稳定同位素分析组织样品选取和样品预处理方法的基础上,系统归纳了稳定同位素技术在鲨鱼摄食生态学,尤其在其摄食和洄游行为研究领域中的应用,着重分析稳定同位素技术在鲨鱼稳定同位素判别值和更新速率、食性分析、营养级评估、洄游路径分析和生态位分布等核心问题上的应用现状和发展前景,以期为国内学者开展鲨鱼类基础生物、生态学研究提供有益参考.     

Sharks, skates and rays in the northeast Atlantic: population status, advice and management

The fisheries management system in the northeast Atlantic is complicated. It was not designed with management or conservation of elasmobranchs in mind. Gradually, however, the system has taken elasmobranchs into account. Managers have asked science to provide advice, and in some cases management actions have followed. The purpose of this short review is to explain the system of assessment and advice, especially how it relates to sharks, skates and rays. Emphasis is on the legal framework, however, soft law and the role of the conservation movement are also discussed.     

Carbon and nitrogen discrimination factors for elasmobranch soft tissues based on a long-term controlled feeding study

The foraging ecology of elasmobranchs (sharks, skates, and rays) is difficult to study because species have spatially and temporally diverse diets. Many diet and habitat preference studies for mammals, birds, and teleosts use stable isotope analysis, but interpretations are limited for elasmobranch studies because taxon-specific isotope discrimination factors from a controlled experiment are unavailable. Trophic discrimination factors for plasma, red blood cells, and muscle were determined from an experiment with leopard sharks (Triakis semifasciata) fed a constant diet of squid over 1000?days. The ??¹³C values for shark tissues at equilibrium with the squid diet did not vary significantly among individuals, but plasma and red blood cell ??¹⁵N values differed significantly among individuals and sampling day. Individual variation of muscle ??¹⁵N averages was observed and likely related to growth. Overall, carbon and nitrogen discrimination factors corresponded to previous studies featuring high-protein diets and carnivorous taxa. The muscle-to-diet discrimination factors from the controlled feeding study were applied to blue sharks (Prionace glauca) and smooth hammerhead sharks (Sphyrna zygaena) caught offshore from Baja California, Mexico. This case study demonstrates the potential of stable isotope analysis to illuminate differences in foraging patterns between elasmobranch species.     

Higher elasmobranch phylogeny and biostratigraphy

Living sharks, skates and rays share several derived skeletal characters that are absent in most extinct elasmobranchs, suggesting a monophyletic group of 'higher' elasmobranchs. Within this group opinions vary as to phylogenetic relationships, although three broad groups are generally recognized. Arguments for and against monophyly of these group (batoids; squalomorphs; galeomorphs) are examined. Many of their contained taxa are also of questionable validity. Cladistic analysis of living galeomorphs reveals a sequence of characters supporting monophyly of the group as whole, but not of its more generalized contained taxa. The temporal distribution of fossil galeomorphs corroborates the hypothesis of relationship suggested by neontological data; i.e. there is considerable stratigraphic harmony with Recent phylogenetic data.     

Molecular phylogenetic evidence refuting the hypothesis of Batoidea (rays and skates) as derived sharks

Early morphological studies regarding the evolutionary history of elasmobranchs suggested sharks and batoids (skates and rays) were respectively monophyletic. More modern morphological cladistic studies, however, have tended to suggest that batoids are derived sharks, closely related to sawsharks and angelsharks, a phylogenetic arrangement known as the Hypnosqualea hypothesis. Very few molecular studies addressing interordinal relationships of elasmobranchs have been published; the few that do exist, are very limited in terms of both taxon representation and/or aligned sequence positions, and are insufficient to answer the question of whether batoids are derived sharks. The purpose of this study was to address this issue with more complete taxon representation, concomitant with a reasonable number of aligned sequence positions. The data set included a 2.4-kb segment of the mitochondrial 12S rRNA-tRNA valine-16S rRNA locus, and in terms of taxa, representatives of two orders of Batoidea, at least one representative of all orders of sharks, and as an outgroup, the widely recognized sister group to elasmobranchs-Holocephali. The results provide the first convincing molecular evidence for shark monophyly and the rejection of the Hypnosqualea hypothesis. Our phylogenetic placement of batoids as a basal elasmobranch lineage means that much of the current thinking regarding the evolution of morphological and life history characteristics in elasmobranchs needs to be re-evaluated.     

An improved method for separation of leucocytes from peripheral blood of the little skate (Leucoraja erinacea)

Cartilaginous fish, especially sharks, rays and skates (elasmobranchs), hold interest as comparative models in immunology because they are thought to be among the organisms most closely related to the ancestor animal that first developed acquired immunity. The aim of this study was to improve methods used for the purification of viable leucocytes from peripheral blood of elasmobranchs. Here we describe modifications of density gradient centrifugation and medium formulation that improve isolation and analysis of highly purified leucocytes from peripheral blood of a model elasmobranch, Leucoraja erinacea, the little skate. These techniques contribute to the preparation of elasmobranch immune cells that can be reliably analyzed by a variety of means, including the study of immune function.     

Glial architecture of the ghost shark (Callorhinchus milii, Holocephali, Chondrichthyes) as revealed by different immunohistochemical markers

This article presents the first study on the glial architecture of a representative species of Holocephali, Callorhinchus milii (ghost shark). Holocephali are a small subclass of Chondrichthyes, with only a few extant genera, and those are considered to have a brain organization more similar to squalomorph sharks than to galeomorph sharks, skates, and rays. Three different astroglial markers--glial fibrillary acidic protein, S-100 protein, and glutamine synthetase (GS)--were investigated by immunohistochemical methods, applying both diaminobenzidine (DAB) and fluorescent techniques. They revealed similar glial structures, although most of them were detected by immunohistochemical reaction against GS and visualized by DAB. The predominant elements were radial ependymoglia spanning the area between the ventricular and meningeal surfaces, as in squalomorph sharks. Other similar features were the light appearance of myelinated neural tracts devoid of immunoreactivity, and the glial architecture of the reticular formation of the brain stem, cerebellum, and tectum, the latter with recognizable layers. The immunoreactivity of the vascular walls was similar; however, it is believed that different cell types form the blood-brain barrier in chimeras and in elasmobranchs. Some glial structures, however, resembled those of skates, rays, and galeomorph sharks. In C. milii astrocyte-like elements were observed in the telencephalon, using GS and S-100, although typical astrocyte-rich regions were not found. In some areas, especially the telencephalon, not only endfeet but also cell bodies were observed to be attached to the meningeal surface, with processes extending into the brain substance.     

The requirement for accurate diet-tissue discrimination factors for interpreting stable isotopes in sharks Comment on: stable isotope dynamics in elasmobranch fishes

Stable isotopes of nitrogen and carbon (δ¹⁵N and δ¹³C) provide an important tool to examine diet, trophic position and movement/migration of both aquatic and terrestrial animals. Over the past 10 years, there have been repeated calls to tighten up basic assumptions when applying stable isotopes, one of the most important being the application of accurate, species-specific diet-tissue discrimination factors (DTDFs). Taxa- or species-specific DTDFs are required for (i) predicting dietary sources to a consumer using stable isotope mixing models and (ii) for estimating trophic position relative to primary consumers or known base species. Logan & Lutcavage (2010) recently presented data on stable isotope dynamics in elasmobranch fishes and concluded that DTDFs for teleost fish were suitable for elasmobranch fish, endorsing the generally applied value of 3.4‰. When considering (i) a recent study which found that DTDFs were lower for large sharks than teleost fish (Hussey et al., 2010) and (ii) that the Logan and Lutcavage study did not experimentally address the issue of DTDFs, we would argue that this conclusion is misleading. We demonstrate this point by estimating the proportion of prey items of a captive shark with a known diet history by modelling the δ¹⁵N values of the shark and its prey. The often repeated implication of inaccurate DTDFs is clear, with model results highly variable depending on the selected DTDF. In addition, model results for the standard teleost DTDF of 3.4‰ provided erroneous estimates of prey consumption. The suggestion that DTDFs for teleost fish are suitable for elasmobranchs may mislead investigators to choose DTDFs which are likely not applicable to their study species. Caution is therefore warranted in advocating this approach. Continued experimental work to examine stable isotopes in sharks is required and recommendations are made.     

Distribution and feeding ecology of the Greenland shark (Somniosus microcephalus) in Greenland waters

Greenland sharks are widely distributed and most likely a highly abundant predator in arctic waters. Greenland sharks have previously been considered scavengers, but recent studies suggest that Greenland sharks also predate on live prey. In this study, distribution and feeding ecology in Greenland waters were investigated. Based on data from 25 years of surveys, Greenland sharks were usually caught at 400–700 m but were found at all depths between 100 and 1,200 m. Based on examination of stomachs from 30 Greenland sharks (total length of 258–460 cm), the most important prey items were Atlantic cod (65.6 % IRI), harp seal (9.9 % IRI), skates (5.2 % IRI) and wolffish (4.4 % IRI), but large geographical variations were observed. Prey composition and qualitative observations support the hypothesis of active predation. Consistent with other studies, the results of this work support the notion that the Greenland shark is an apex predator with the potential to influence trophic dynamics in the Arctic.     

Molecular phylogeny of elasmobranchs inferred from mitochondrial and nuclear markers

The elasmobranchs (sharks, rays and skates) being the extant survivors of one of the earliest offshoots of the vertebrate evolutionary tree are good model organisms to study the primitive vertebrate conditions. They play a significant role in maintaining the ecological balance and have high economic value. Due to over-exploitation and illegal fishing worldwide, the elasmobranch stocks are being decimated at an alarming rate. Appropriate management measures are necessary for restoring depleted elasmobranch stocks. One approach for restoring stocks is implementation of conservation measures and these measures can be formulated effectively by knowing the evolutionary relationship among the elasmobranchs. In this study, a total of 30 species were chosen for molecular phylogeny studies using mitochondrial cytochrome c oxidase subunit I, 12S ribosomal RNA gene and nuclear Internal Transcribed Spacer 2. Among different genes, the combined dataset of COI and 12S rRNA resulted in a well resolved tree topology with significant bootstrap/posterior probabilities values. The results supported the reciprocal monophyly of sharks and batoids. Within Galeomorphii, Heterodontiformes (bullhead sharks) formed as a sister group to Lamniformes (mackerel sharks): Orectolobiformes (carpet sharks) and to Carcharhiniformes (ground sharks). Within batoids, the Myliobatiformes formed a monophyly group while Pristiformes (sawfishes) and Rhinobatiformes (guitar fishes) formed a sister group to all other batoids.     

Cell and molecular biology of SAE, a cell line from the spiny dogfish shark, Squalus acanthias

Cartilaginous fish, primarily sharks, rays and skates (elasmobranchs), appeared 450 million years ago. They are the most primitive vertebrates, exhibiting jaws and teeth, adaptive immunity, a pressurized circulatory system, thymus, spleen, and a liver comparable to that of humans. The most used elasmobranch in biomedical research is the spiny dogfish shark, Squalus acanthias. Comparative genomic analysis of the dogfish shark, the little skate (Leucoraja erincea), and other elasmobranchs have yielded insights into conserved functional domains of genes associated with human liver function, multidrug resistance, cystic fibrosis, and other biomedically relevant processes. While genomic information from these animals is informative in an evolutionary framework, experimental verification of functions of genomic sequences depends heavily on cell culture approaches. We have derived the first multipassage, continuously proliferating cell line of a cartilaginous fish. The line was initiated from embryos of the spiny dogfish shark. The cells were maintained in a medium modified for fish species and supplemented with cell type-specific hormones, other proteins and sera, and plated on a collagen substrate. SAE cells have been cultured continuously for three years. These cells can be transfected by plasmids and have been cryopreserved. Expressed Sequence Tags generated from a normalized SAE cDNA library included a number of markers for cartilage and muscle, as well as proteins influencing tissue differentiation and development, suggesting that SAE cells may be of mesenchymal stem cell origin. Examination of SAE EST sequences also revealed a cartilaginous fish-specific repetitive sequence that may be evidence of an ancient mobile genetic element that most likely was introduced into the cartilaginous fish lineage after divergence from the lineage leading to teleosts.     

Diet Reconstruction and Resource Partitioning of a Caribbean Marine Mesopredator Using Stable Isotope Bayesian Modelling

The trophic ecology of epibenthic mesopredators is not well understood in terms of prey partitioning with sympatric elasmobranchs or their effects on prey communities, yet the importance of omnivores in community trophic dynamics is being increasingly realised. This study used stable isotope analysis of ¹⁵N and ¹³C to model diet composition of wild southern stingrays Dasyatis americana and compare trophic niche space to nurse sharks Ginglymostoma cirratum and Caribbean reef sharks Carcharhinus perezi on Glovers Reef Atoll, Belize. Bayesian stable isotope mixing models were used to investigate prey choice as well as viable Diet-Tissue Discrimination Factors for use with stingrays. Stingray δ¹⁵N values showed the greatest variation and a positive relationship with size, with an isotopic niche width approximately twice that of sympatric species. Shark species exhibited comparatively restricted δ¹⁵N values and greater δ¹³C variation, with very little overlap of stingray niche space. Mixing models suggest bivalves and annelids are proportionally more important prey in the stingray diet than crustaceans and teleosts at Glovers Reef, in contrast to all but one published diet study using stomach contents from other locations. Incorporating gut contents information from the literature, we suggest diet-tissue discrimination factors values of Δ¹⁵N ≊ 2.7‰ and Δ¹³C ≊ 0.9‰ for stingrays in the absence of validation experiments. The wide trophic niche and lower trophic level exhibited by stingrays compared to sympatric sharks supports their putative role as important base stabilisers in benthic systems, with the potential to absorb trophic perturbations through numerous opportunistic prey interactions.     

Evolution of Upper Jaw Protrusion Mechanisms in Elasmobranchs

Upper jaw protrusion is a prominent component of the feedingmechanism in most elasmobranchs and has received considerableattention over the years. In this paper, we review what is knownof muscle activity during prey capture in elasmobranchs, particularlythat of upper jaw protrusion, and evaluate the extent to whichfunctional modifications have evolved through changes in anatomyor patterns of muscle activity. To date, motor activity duringfeeding has been documented in only four species of elasmobranchs,although they represent the three major elasmobranch groups:Galea (typical sharks); Squalea (dogfish sharks); and Batoidea(skates and rays). Our efforts show that while muscles involvedin cranial elevation and lower jaw depression and elevationshow a conserved pattern of motor activity and function acrossspecies, other muscles show a more variable history. Our observationsof elasmobranch upper jaw protrusion mechanisms suggest a mosaicof character changes over the course of evolution that involveanatomical changes in all cases and modifications of muscleactivation patterns in some cases. During the evolution of feedingmechanisms of elasmobranchs, there have been two structuralchanges incorporating a pre-existing motor pattern to yieldan unmodified kinematic profile, the original preorbitalis andthe descendent preorbitalis. One additional instance of structuralmodification is accompanied by an alteration in the motor patternleading to a change in movement pattern, the levator palatoquadrati.     

New insights on the trophic ecology of blue (Prionace glauca) and shortfin mako sharks (Isurus oxyrinchus) from the oceanic eastern South Pacific

The blue shark (Prionace glauca) and the shortfin mako shark (Isurus oxyrinchus) are two large and highly migratory sharks distributed in most oceans. Although they are often caught in the south Pacific Ocean long-line fisheries, their trophic ecology is poorly understood. Stable isotopes with Bayesian mixing and dependence concentration models were performed to determine the diet and trophic differences between the two species in the South-eastern Pacific Ocean. According to the mixing models, fishes are the most important prey of these sharks. Dolphin calves and remains were found in the stomachs of both species, which represents a novel finding in trophic ecology of South Pacific sharks. Intra-specific differences were found in P. glauca, but not in specimens of I. oxyrinchus. The two sharks showed a high degree of diet overlap (73%), primarily over mackerel and dolphin carcasses. Our results indicate that blue and shortfin mako sharks have a generalist feeding strategy in the eastern Pacific Ocean, with a strong preference for teleost fishes and also for dolphin carcasses. Therefore, trophic studies are useful to understand energy flow through the food web, and the trophic position of key species.     

Characterization of food web structure of the upper continental slope of the Celtic Sea highlighting the trophic ecology of five deep‐sea fishes

In marine ecosystems, the study of trophic relationships has extensively benefited from the development of stable isotope analyses (SIA) as dietary tracers. SIA are particularly useful in elucidating the structure of deep sea food webs given the constraints involved in obtaining gut‐content data from deep trawling. We used carbon and nitrogen stable isotope analyses and Stable Isotope Bayesian Ellipses in R (SIBER) and Stable Isotope Analysis in R (SIAR) routines, to determine the trophic ecology of five deep‐sea fishes from the upper continental slope of the Celtic Sea. SIA made it possible to deduce some general tendencies in food‐web structure and species trophic interactions and confirmed diet determined by gut‐content analysis for the same species, in other ecoregions. More specifically, mixing models revealed that the deep sea species considered are omnivorous and are able to feed on all the sampled taxa. Based on isotopic ratio, no clear differences in fish diet could be detected from one species to another except for rabbit fish, which has benthic affinities. Three species, blackbelly rosefish, greater forkbeard and softhead grenadier showed overlapping isotopic niches. This study is the first attempt to describe the trophic ecology of deep sea species on the Celtic Sea upper continental slope. In the context of the development of ecosystem integrated modeling approaches for managing fisheries in the Celtic sea, and considering the vulnerability of deep‐water species, improving the knowledge on the trophic ecology of these local species is of importance in order to allow their sustainable exploitation.     

Reassessing the trophic role of reef sharks as apex predators on coral reefs

Apex predators often have strong top-down effects on ecosystem components and are therefore a priority for conservation and management. Due to their large size and conspicuous predatory behaviour, reef sharks are typically assumed to be apex predators, but their functional role is yet to be confirmed. In this study, we used stomach contents and stable isotopes to estimate diet, trophic position and carbon sources for three common species of reef shark (Triaenodon obesus, Carcharhinus melanopterus and C. amblyrhynchos) from the Great Barrier Reef (Australia) and evaluated their assumed functional role as apex predators by qualitative and quantitative comparisons with other sharks and large predatory fishes. We found that reef sharks do not occupy the apex of coral reef food chains, but instead have functional roles similar to those of large predatory fishes such as snappers, emperors and groupers, which are typically regarded as high-level mesopredators. We hypothesise that a degree of functional redundancy exists within this guild of predators, potentially explaining why shark-induced trophic cascades are rare or subtle in coral reef ecosystems. We also found that reef sharks participate in multiple food webs (pelagic and benthic) and are sustained by multiple sources of primary production. We conclude that large conspicuous predators, be they elasmobranchs or any other taxon, should not axiomatically be regarded as apex predators without thorough analysis of their diet. In the case of reef sharks, our dietary analyses suggest they should be reassigned to an alternative trophic group such as high-level mesopredators. This change will facilitate improved understanding of how reef communities function and how removal of predators (e.g., via fishing) might affect ecosystem properties.     

Combining stable isotope analysis and conventional techniques to improve knowledge of the diet of the European Roller Coracias garrulus

Diet studies are crucial for understanding the ecology and evolution of species, as well as for establishing appropriate conservation and management strategies. However, they remain methodologically challenging due to variation between seasons, sites, sexes or age groups and even variation between individuals. Due to method‐specific characteristics and biases, a combination of existing techniques can overcome the inherent limitations of each technique and provide a more accurate and broad picture of species’ food preferences. Here, we examine diet information obtained using three different assessment methods to better understand the trophic ecology of the European Roller Coracias garrulus, a species targeted by conservation measures in Europe. First, we analysed regurgitated pellets and video‐recordings to report the diet composition of adult and nestling Rollers, respectively. Secondly, we used stable isotope analysis (SIA) to investigate adult sexual diet segregation as well as to confirm the main findings regarding adult and nestling diets obtained through conventional methods. Based on the analysis of pellets, the diet of adult Rollers was dominated by Coleoptera, whereas camera images revealed that the diet of nestlings was dominated by Orthoptera, mainly grasshoppers and bush crickets. Blood isotopic signatures of adult and nestling Rollers confirmed the results obtained through pellet and video‐recording techniques. Of the three methods, pellet analysis provided the most comprehensive trophic information regarding the detectable prey spectrum and prey species contribution, as well as basic diet information for the SIA. Our results also highlight the potential of SIA for assessing intraspecific variation in diet by sampling individuals of known age and sex, which is often unfeasible through conventional approaches. SIA analysis showed no differences in δ¹³C and δ¹⁵N ratios of blood between males and females and a high degree of overlap amongst isotopic niches, suggesting no sex‐specific partitioning in resource use. Overall, we showed that the combination of different methods could be used to gain new and clearer insights into avian trophic ecology that are essential for informing habitat management aiming to improve availability of foraging resources.     

Diet,trophic interactions and possible ecological role of commercial sharks and batoids in northern Peruvian waters

The Peruvian sea represents one of the most productive ocean ecosystems and possesses one of the largest elasmobranch fisheries in the Pacific Ocean. Ecosystem-based management of these fisheries will require information on the trophic ecology of elasmobranchs. This study aimed to understand the diet, trophic interactions and the role of nine commercial elasmobranch species in northern Peru through the analysis of stomach contents. A total of 865 non-empty stomachs were analysed. Off northern Peru, elasmobranchs function as upper-trophic-level species consuming 78 prey items, predominantly teleosts and cephalopods. Two distinctive trophic assemblages were identified: (a) sharks (smooth hammerhead shark Sphyrna zygaena, thresher shark Alopias spp. and blue shark Prionace glauca) that feed mainly on cephalopods in the pelagic ecosystem; and (b) sharks and batoids (Chilean eagle ray Myliobatis chilensis, humpback smooth-hound Mustelus whitneyi, spotted houndshark Triakis maculata, Pacific guitarfish Pseudobatos planiceps, copper shark Carcharhinus brachyurus and school shark Galeorhinus galeus) that feed mainly on teleosts and invertebrates in the benthonic and pelagic coastal ecosystem. This study reveals for the first time the diet of T. maculata and the importance of elasmobranchs as predators of abundant and commercial species (i.e., jumbo squid Dosidicus gigas and Peruvian anchovy Engraulis ringens). The results of this study can assist in the design of an ecosystem-based management for the northern Peruvian sea and the conservation of these highly exploited, threatened or poorly understood group of predators in one of the most productive marine ecosystems.     

Influence of environmental factors on shark and ray movement,behaviour and habitat use: a review

Any attempt to describe the spatial ecology of sharks and rays should consider the drivers responsible for movement. Research has shown fluctuations in the environment (abiotic factors) can trigger movement and changes in behaviour and habitat use for many elasmobranch species. Most studies to date have selectively focused on a small number of abiotic factors (i.e. temperature, salinity); however, other factors such as dissolved oxygen, tide, photoperiod, barometric pressure and pH have also been documented to act as drivers of movement in shark and ray species. Although usually examined individually, abiotic factors rarely act in isolation and often differ in their level of influence between species, sex, ontogenetic stage, season and geographic location. This paper reviews the role of abiotic factors as a driver of movement and changes in behaviour and habitat use in elasmobranchs. In the context of a changing climate, insight into how sharks and rays may respond to fluctuating environmental conditions projected under future scenarios is required.