Postglacial recolonization at a snail's pace (Trochulus villosus): confronting competing refugia hypotheses using model selection

The localization of Last Glacial Maximum (LGM) refugia is crucial information to understand a species' history and predict its reaction to future climate changes. However, many phylogeographical studies often lack sampling designs intensive enough to precisely localize these refugia. The hairy land snail Trochulus villosus has a small range centred on Switzerland, which could be intensively covered by sampling 455 individuals from 52 populations. Based on mitochondrial DNA sequences (COI and 16S), we identified two divergent lineages with distinct geographical distributions. Bayesian skyline plots suggested that both lineages expanded at the end of the LGM. To find where the origin populations were located, we applied the principles of ancestral character reconstruction and identified a candidate refugium for each mtDNA lineage: the French Jura and Central Switzerland, both ice-free during the LGM. Additional refugia, however, could not be excluded, as suggested by the microsatellite analysis of a population subset. Modelling the LGM niche of T. villosus , we showed that suitable climatic conditions were expected in the inferred refugia, but potentially also in the nunataks of the alpine ice shield. In a model selection approach, we compared several alternative recolonization scenarios by estimating the Akaike information criterion for their respective maximum-likelihood migration rates. The 'two refugia' scenario received by far the best support given the distribution of genetic diversity in T. villosus populations. Provided that fine-scale sampling designs and various analytical approaches are combined, it is possible to refine our necessary understanding of species responses to environmental changes.     

A Late Triassic lake system in East Greenland: facies, depositional cycles and palaeoclimate

The Upper Triassic Fleming Fjord Formation of the Jameson Land Basin in East Greenland contains a well-exposed succession, 200–300 m thick, of lake deposits. The Malmros Klint Member, 100–130 m thick, is composed of cyclically bedded intraformational conglomerates, red siltstones and fine-grained sandstones and disrupted dolomitic sediments (paleosols). The cyclicity is composite with cycles having mean thicknesses of (25), 5.9 and 1.6 m. The overlying Carlsberg Fjord beds of the Ørsted Dal Member, 80–115 m thick, are composed of structureless red mudstones rhythmically broken by thin greyish siltstones. This unit also has a composite cyclicity with cycles having mean thicknesses of 5.0 and 1.0 m. The uppermost Tait Bjerg Beds of the Ørsted Dal Member, 50–65 m thick, can be divided into two units. A lower unit is composed of cyclically bedded intraformational conglomerates or thin sandstones, red mudstones, greenish mudstones and yellowish marlstones. An upper unit is composed of relatively simple cycles of grey mudstones and yellowish marlstones. Recognized cycles have mean thicknesses of 5.6 and 1.6 m. The lake deposits contain evidence of seasonal, orbital and long-term climatic change. Seasonal change is documented by numerous desiccation surfaces especially in the Malmros Klint Member and Carlsberg Fjord beds, orbital change is suggested by the composite cyclicity, and long-term climatic change is indicated by the systematic upwards change in sedimentary characteristics of the lake deposits. The sedimentary features of the Malmros Klint Member suggest lacustrine deposition in a dry climate that fluctuated between desert and steppe conditions, the Carlsberg Fjord beds probably record lacustrine lake deposition in a rather constant dry (steppe) climate, while the Tait Bjerg Beds record lake sedimentation in a climate that fluctuated between dry (steppe) and warm moist temperate. In the Tait Bjerg Beds the upward change in cycle characteristics indicates a shift towards more humid conditions. Climatic deductions from sedimentary facies are in good agreement with climate maps of Laurasia, as simulated by numerical climate models. Palaeomagnetic data indicate a northward drift of East Greenland of about 10° from ca. 25°N to ca. 35°N in the Middle to Late Triassic. The Fleming Fjord Formation which represents ca. 5 m.y. of the Late Triassic interval was deposited during latitudinal drift of 1–2°. It is possible that the observed long-term upward shift in climatic indicators within the formation can be ascribed to plate drift, but southward shift of climatic belts could also have been of importance.     

Nitrogen fixation in a large shallow lake: rates and initiation conditions

The fixation of molecular nitrogen (N₂fix) by cyanobacteria in situ and in PO₄-P enrichment experiments was investigated in large shallow Lake Võrtsjärv in 1998–2000. In this lake, N₂fix started when TN/TP mass ratio was about 20, which is much higher than Redfield mass ratio 7. The rate of N₂fix varied between 0.81 and 2.61 gN l^–1 d^–1 and maximum rate (2.61 gN l^–1 d^–1) was measured in 15.08.2000. In L. Võrtsjärv a lag period of a couple of weaks occurred between the set-up of favourable conditions for N₂fix as the appearance of N₂-fixing species and depletion of mineral nitrogen, and the real N₂fix itself. However, if the favorable conditions for N₂fix occurred in the lake, N₂fix started after enrichment with PO₄-P in mesocosms even then when no N₂fix was detected in the lake. N₂fix in mesocosms was also more intensive than in lake water. In our experiments PO₄-P concentrations higher than 100 gP l^–1started to inhibit N₂fix.     

Respiratory rates in the cladoceran Ceriodaphnia dubia in Lake Rotongaio, a monomictic lake

The experimentally measured oxygen consumption rate by the cladoceran,Ceriodaphnia dubia, showed a linear increase between 5 and 20°C.Oxygen consumption rates of C. dubia were estimated in situfrom respiratory electron transport system (ETS) activity inLake Rotongaio during summer stratification and winter mixing.Oxygen consumption was 0.002 µl O₂ animal^–1 h^–1in the hypolimnion and 0.076 µl O₂ animal^–1 h^–1in the epilimnion during stratification. Implications of respiredoxygen for metabolic carbon requirements are discussed.     

Cladocera in space and time: Analysis of lake sediments

Shells of Bosminidae and Chydoridae are quantitatively preserved in lake sediments. The chronological deposition of these remains provides the means for longterm observation of these Cladocera, both in terms of species and communities. Chydorid analysis, as based on subfossil assemblages, is an analysis of community and provides direct observation of community dynamics over extended periods of time. It has proved to be a valuable method to obtain information on the influence of environmental factors and time on community characteristics. Morphological variation inBosmina (Eubosmina) has been followed for some thousand years. This is of special interest for the evaluation of taxonomic rank (species, forms) if closely related taxa have co-existed. Bosmina successions, as well as shifts in the chydorid fauna, are related to environmental change. Thus, cladoceran analysis of lake sediments provides information on the developmental history of lakes and allows observation of the effects of longterm environmental changes, such as climatic changes and eutrophication.     

Being and place: movement, ancestors, and personhood in East Java, Indonesia

This article is about the transformation of the frontier character of East Java and the impact that such a transformation and the migrations that precipitated it have on forms of personhood in a specific locality. Within this context, it enquires into the capacities of human subjects to create place and the capacity of place to create persons. In particular, it looks at the ways in which memories, kinship, and ritual practices are spatialized and the manner in which such practices, once solidified and coagulated into topographies that map social relations, give rise to particular conceptions of place and personhood as mutually constituting and equally fluid and alterable.  

Résumé

L'auteur traite de la transformation du caractère de frontière de l'est de Java et de l'impact de cette transformation et des migrations qui l'ont suscitée sur la notion de personne dans une localité spécifique. Dans ce contexte, il étudie la capacité des êtres humains à créer des lieux et la capacité des lieux à créer des personnes. Il examine en particulier la manière dont les souvenirs, la parenté et les pratiques rituelles sont spatialisés et dont ces pratiques, une fois agglomérées dans des topographies représentant les relations sociales, suscitent des conceptions particulières du lieu et de la personne comme constitutifs l'un de l'autre et tout aussi mouvants et changeant l'un que l'autre.     

Depth distribution of euryhaline halophilic bacteria in Suribati Ike, a meromictic lake in East Antarctica

Euryhaline halophiles grow over a wide range of salinity, from <3% NaCl (seawater equivalent) to >15% NaCl and even saturation level (about 30% NaCl). Several species of euryhaline halophiles occur worldwide, especially in marine environments and also in aquatic and terrestrial habitats of the Antarctic ice-free areas. A biogeographic view of Antarctic halophiles is that their migration among lakes on land is more difficult than in marine setting. Ponds and lakes on land may thus serve as “islands” which facilitate the selection and separation of unique species. We isolated euryhaline halophiles from the saline lake, Suribati Ike, near Syowa Station and placed them into seven groups, each demonstrating a clear depth-related distribution. Six of the seven groups probably represent new species of the genera Halomonas and Marinobacter. This result suggests that Antarctic saline lakes exhibit high selectivity of unique euryhaline halophiles and possibly of other microbial groups.     

A comparison of phytoplankton size-fractions in Mondsee,an alpine lake in Austria: distribution,pigment composition and primary production rates

Production rates, abundance, chlorophyll a (Chl a) concentrations and pigment composition were measured for three size classes (<2 μm, 2–11 μm and >11 μm) of phytoplankton from May to December 2000 in deep, mesotrophic, alpine lake Mondsee in Austria. The study focuses on differences among phytoplankton size fractions characterised by their surface area to volume ratio ([mm² l⁻¹: mm³l⁻¹]), pigment distribution patterns and photosynthetic rates. Particular attention was paid to autotrophic picophytoplankton (APP, fraction <2 μm) since this size fraction differed significantly from the two larger size fractions. Among the three fractions, APP showed the highest surface area to volume ratios and a high persistence in the pattern of lipophilic pigments between temporarily and spatially successive samples (about 80% similarity of pigment composition between samples over seasons and depths). The epilimnetic abundance of APP varied seasonally with an annual maximum of 180 × 10³ cells ml⁻¹ in June (at 4–9 m). The minimum (October at 12 m) was more than an order of magnitude lower (4.9 × 10³ ml⁻¹). APP peaked during autumn and contributed between 24% and 42% to the total area-integrated Chl a (10–23 mg m⁻²) and between 16% and 58% to total area-integrated production (5–64 mg m⁻²  h⁻¹) throughout seasons.     

In situ determination of sulfide turnover rates in a meromictic alpine lake

A push-pull method, previously used in groundwater analyses, was successfully adapted for measuring sulfide turnover rates in situ at different depths in the meromictic Lake Cadagno. In the layer of phototrophic bacteria at about 12 m in depth net sulfide consumption was observed during the day, indicating active bacterial photosynthesis. During the night the sulfide turnover rates were positive, indicating a net sulfide production from the reduction of more-oxidized sulfur compounds. Because of lack of light, no photosynthesis takes place in the monimolimnion; thus, only sulfide formation is observed both during the day and the night. Sulfide turnover rates in the oxic mixolimnion were always positive as sulfide is spontaneously oxidized by oxygen and as the rates of sulfide oxidation depend on the oxygen concentrations present. Sulfide oxidation by chemolithotrophic bacteria may occur at the oxicline, but this cannot be distinguished from spontaneous chemical oxidation.     

Terrestrial gastropods and experimental climate change: A field study in a calcareous grassland

The impact of field manipulations of local climate on terrestrial gastropod populations and how they may affect the dynamics of the plant community were studied in a calcareous grassland. The experimental site was located in a grassland at the Wytham estate, Oxfordshire, UK. Manipulations representing two climate change scenarios in a factorial combination were used, these were warmer winters with increased summer rainfall, and warmer winters with summer drought. The climate manipulations had a significant effect on the relative abundance of molluscs. However, no important changes in species composition were found. Distribution and densities of snails and slugs were affected because of changes in the physical environment and the vegetation in the grassland. The responses of different species to the climate manipulations were strongly influenced by their phenological traits and food preferences. Potential responses of mollusc populations to a changing climate are discussed.     

Factors influencing nitrogen and phosphorus excretion rates of fish in a shallow lake

Summary 1. Fish excretion can be an important source of nutrients in aquatic ecosystems. Nitrogen (N) and phosphorus (P) excretion rates are influenced by many factors, including fish diet, fish growth rate and fish size. However, the relative influence of these and other factors on community‐level excretion rates of fish is unknown. 2. We used bioenergetics modeling to estimate excretion rates of eight fish species in a shallow, Minnesota (U.S.A.) lake over four months in both 2004 and 2005. Excretion rates of each species were summed for community‐level N and P excretion rates, as well as the N : P ratio of excretion. We then used a model‐selection approach to assess ability of independent variables to predict excretion rates, and to identify the most parsimonious model for predicting N : P excretion ratios and P and N excretion rates at the community scale. Predictive models were comprised of the independent variables water temperature and average fish density, fish size, fish growth rate, nutrient content of fish and nutrient content of fish diets at the community scale. 3. Fish density and nutrient content of fish diets (either N or P) were the most parsimonious models for predicting both N and P excretion rates, and explained 96% and 92% of the variance in N and P excretion, respectively. Moreover, fish density and nutrient models had 1400‐fold more support for predicting N and 21‐fold more support for predicting P excretion relative to models based on fish density only. Water temperature, fish size, fish growth rates and nutrient content of fish showed little influence on excretion rates, and none of our independent variables showed a strong relationship with N : P ratios of excretion. 4. Past work has focused on the importance of fish density as a driver of fish excretion rates on a volumetric basis. However, our results indicate that volumetric excretion rates at the community scale will also change substantially in response to changes in relative abundance of fish prey or shifts in relative dominance of planktivores, benthivores, or piscivores. Changes in community‐scale excretion rates will have subsequent influences on algal abundance, water clarity, and other ecosystem characteristics.     

Expanding ecological appropriation approach: Solar space method and a case study in Yangzhou city,East China

In this paper, the authors made an attempt to measure appropriation of ecosystems more reasonably and effectively based on examining the advantages and disadvantages of emergy analysis and ecological footprint. By combining emergy analysis with ecological footprint (EF) in terms of spatial equivalent of energy productivity, a new method of solar space (SS) and its calculating framework was proposed, and some necessary parameters for this method of analysis were calculated. A case study was followed under this calculating framework for Yangzhou city, Jiangsu province, Eastern China, using the data of the year 2000. The main results are as follows: (1) The ecological space in Yangzhou city includes earth surface space and solar space, and their demands were bigger than their supply. In the year of 2000, the earth surface space had an absolute deficit of 2.3063E?02 Ga-ha per capita (global hectares), and the solar space had an absolute deficit of 1.4944E?04 Sa-ha per capita (solar hectares). (2) There was a relative ecological deficit of 3.68% in earth surface space, and that of 154.86% in solar space. (3) Only freshwater areas and built-up areas were in a state of surplus, and there was a relative ecological surplus of 82.66% for freshwater areas, being greater than that for built-up areas. (4) The ranking of absolute ecological deficit in a descending order was as follows: solar space > arable land > pasture > forest > marine area > garden land, while the relative ecological deficit was the following: solar space > pasture land > forest land > arable land > garden land, except marine areas.A qualitative comparison of methodology was made between solar space method and ecological footprint according to their capability to describe the temporal-spatial characteristics of ecosystems appropriation. Moreover, a quantitative comparison was also conducted to show their differences in applicability to the assessment of ecosystems appropriation. It was shown that the calculating results from solar space method were bigger than that from ecological footprint because the former supplemented additional items of appropriation omitted by the later and included some new items of indirect appropriation that were excluded by the later. It is found that the new measure of solar space operates well as an indicator of the city's appropriation to ecosystems.     

Sinking rates of planktonic diatoms in an unstratified lake: a comparison of field and laboratory observations

SUMMARY. 1. Natural population sinking rates were calculated by fitting an exponential regression to 6 years'observations on declining crops of Melosira italica subarctica O. Müll. and Stephanodiscus astraea (Ehr.) Grun.
2. Losses were described by an exponential model which yielded still water sinking rates of 0.86 md⁻¹ for M. italica and 0.45md⁻¹ for S. astraea.
3. Laboratory measurements of the sinking rate of natural populations showed that the rate increased abruptly from less than 0.2 m d⁻¹ in growing populations to 0.4 m d⁻¹ after silica depletion.
4. The measured sinking rate of S. astraea agreed well with that observed in the field. Where as populations of M. italica appeared to sink more quickly in the lake than could be accounted for by laboratory observations.     

Genetic distinction of four haplochromine cichlid fish species in a satellite lake of Lake Victoria,East Africa

Lake Victoria is famous for its in evolutionary terms young but species‐rich assemblage of cichlid fishes. This ‘superflock’ also includes additional species from adjacent water systems. Lake Victoria is surrounded by several smaller lakes that are connected to the main water body of Lake Victoria only through swampy areas. Lake Kanyaboli is one such lake, harbouring a much poorer species diversity, mostly comprised of Lake Victoria endemics, some of which are now considered extirpated from the main lake. The focus of this study was on the modern haplochromine component of the cichlid fauna, represented by Lipochromis maxillaris, Astatotilapia nubila, Xystichromis phytophagus and Astatotilapia sp. ‘Bigeye’, as well as a number of morphologically distinct haplochromine specimens that could not be assigned to any of the recognized species. We used five microsatellite markers to distinguish these five taxa. Genetically, L. maxillaris was clearly differentiated from all other taxa, and A. sp. ‘Bigeye’ was moderately differentiated from the remaining three. Astatotilapia nubila, X. phytophagus and the unidentified specimens constituted a partially overlapping cluster. As each of the clusters had several (5–14) private alleles, extremely recent divergence is suggested. As all taxa except for A. sp. ‘Bigeye’ and the unidentified specimens also occur or at least occurred in Lake Victoria, it is likely that they evolved as part of the Lake Victoria superflock, while A. sp. ‘Bigeye’ and the unidentified specimens may have currently evolved in situ. The observation of slightly distinct albeit overlapping body shapes and the extremely close genetic relationship between three of the five taxa are fully compatible and in support of the hybrid swarm theory of adaptive radiation.     

Grazing rates of a calanoid copepod (Paralabidocera antarctica) in a continental Antarctic lake

The presence of crustaceans in some Antarctic lakes adds a level of complexity to the food webs of these environments. The grazing pressure of the crustaceans on phytoplankton and other protists, and the role they play in controlling food web structure, has not yet been examined in any detail. This paper presents the first data on grazing pressure of crustacean zooplankton in continental Antarctic lakes. In this study the grazing rates of Paralabidocera antarctica in saline Ace Lake, Vestfold Hills, were assessed using a radio-tracer method. Clearance rates ranged from approximately 1 to 8 ml ind.⁻¹ day⁻¹, depending on developmental stage. Due to their high abundance, nauplii exhibited the highest daily carbon ingestion rates. The population cleared about 3% of the water column per day, accounting for a significant fraction of primary production. P. antarctica has a considerable impact on the carbon cycle in Ace Lake and, by inference, in the other lakes in which it occurs. Accepted: 30 October 1999     

Specific growth rates of heterotrophic plankton organisms in a eutrophic lake during a spring bloom

The in situ growth of the dominating pelagic organisms at severaltrophic levels was investigated during a spring bloom characterizedby well-mixed cold water. The study includes primary productionand the carbon flow through the nano-, micro- and mesozooplanktonpopulations based on population dynamics and specific growthrates. The phytoplankton biomass and production were totallydominated by small algae <20 µm. of which {small tilde}5%were <3µm. potentially a food source for the nano-and microzooplankton. The mean carbon-specific primary productionwas 0.15 day^–1 and was regulated solely by light. Themean volume-based specific growth rate of bacterioplankton wasmodest. 0.1 day^–1. and probably controlled by the lowtemperature. The volume-based specific growth rates of heterotrophicnanoflagellates. ciliates. rotifers and copepods were 0.35.0.13. 0.16 and 0.03 day^–1, respectively. The observedgrowth of the heterotrophic plankton was generally not foodlimited, but was controlled by temperature. The stable temperatureduring the experiment therefore allows a cross-taxonomic comparisonof specific growth rates. The b exponent in the allometric relationship(G = aV^th) between volume-specific growth rate (G) and individualbody size (V) was –0.15 ± 0.03 for all filtratingzooplankton. indicating an in situ scaling not far from thephysiological principles onginally demonstrated for laboratorypopulations.     

Coordinates transformation and learning control for visually-guided voluntary movement with iteration: A Newton-like method in a function space

In order to control visually-guided voluntary movements, the central nervous system (CNS) must solve the following three computational problems at different levels: (1) determination of a desired trajectory in the visual coordinates, (2) transformation of the coordinates of the desired trajectory to the body coordinates and (3) generation of motor command. In this paper, the second and the third problems are treated at computational, representational and hardware levels of Marr. We first study the problems at the computational level, and then propose an iterative learning scheme as a possible algorithm. This is a trial and error type learning such as repetitive training of golf swing. The amount of motor command needed to coordinate activities of many muscles is not determined at once, but in a step-wise, trial and error fashion in the course of a set of repetitions. Actually, the motor command in the (n+1)-th iteration is a sum of the motor command in then-th iteration plus two modification terms which are, respectively, proportional to acceleration and speed errors between the desired trajectory and the realized trajectory in then-th iteration. We mathematically formulate this iterative learning control as a Newton-like method in functional spaces and prove its convergence under appropriate mathematical conditions with use of dynamical system theory and functional analysis. Computer simulations of this iterative learning control of a robotic manipulator in the body or visual coordinates are shown. Finally, we propose that areas 2, 5, and 7 of the sensory association cortex are possible sites of this learning control. Further we propose neural network model which acquires transformation matrices from acceleration or velocity to motor command, which are used in these schemes.