红莲型细胞质雄性不育水稻线粒体atp6基因转录本的编辑位点研究

以红莲（HL）型水稻细胞质雄性不育系A、保持系B及杂种一代F₁为材料,首次比较研究了红莲型水稻线粒体atp6基因转录本的编辑位点及各位点的编辑频率.结果表明atp6基因的转录本有18个编辑位点,其中有15个发生在密码子的第一和第二位点上,这些位点的编辑最终会导致氨基酸种类的变化.18个编辑位点在A、B和F₁中没有差异,但各位点的编辑频率在引入了核恢复基因的条件下发生了较大的变化,完全编辑的比例增加.这些结果首次证明HL型细胞质雄性不育与线粒体atp6转录本的编辑有一定相关性,编辑不充分的转录产物最终会干扰线粒体功能的正常发挥.     

Modulation of nutrient acquisition and polyamine pool in salt-stressed wheat (Triticum aestivum L.) plants inoculated with arbuscular mycorrhizal fungi

Two wheat (Triticum aestivum L.) cultivars, Sids 1 and Giza 168, were grown under non-saline or saline conditions (4.7 and 9.4 dS m^?1) with and without arbuscular mycorrhizal fungi (AMF) inoculation. Salt stress considerably decreased root colonization, plant productivity and N, P, K⁺, Fe, Zn and Cu concentrations, while it increased Na⁺ level, particularly in Giza 168. Mycorrhizal colonization significantly enhanced plant productivity and N, P, K⁺, Fe, Zn and Cu acquisition, while it diminished Na⁺ uptake, especially in Sids 1. Salinity increased putrescine level in Giza 168, however, values of spermidine and spermine increased in Sids 1 and decreased in Giza 168. Mycorrhization changed the polyamine balance under saline conditions, an increase in putrescine level associated with low contents of spermidine and spermine in Giza 168 was observed, while Sids 1 showed a decrease in putrescine and high increase in spermidine and spermine. Moreover, mycorrhizal inoculation significantly reduced the activities of diamine oxidase and polyamine oxidase in salt-stressed wheat plants. Modulation of nutrient acquisition and polyamine pool can be one of the mechanisms used by AMF to improve wheat adaptation to saline soils. This is the first report dealing with mycorrhization effect on diamine oxidase and polyamine oxidase activities under salt stress.     

Assembly of the Rotor Component of Yeast Mitochondrial ATP Synthase Is Enhanced When Atp9p Is Supplied by Atp9p-Cox6p Complexes

The Atp9p ring is one of several assembly modules of yeast mitochondrial ATP synthase. The ring, composed of 10 copies of Atp9p, is part of the rotor that couples proton translocation to synthesis or hydrolysis of ATP. We present evidence that before its assembly with other ATP synthase modules, most of Atp9p is present in at least three complexes with masses of 200–400 kDa that co-immunopurify with Cox6p. Pulse-labeling analysis disclosed a time-dependent reduction of radiolabeled Atp9p in the complexes and an increase of Atp9p in the ring form of wild type yeast and of mss51, pet111, and pet494 mutants lacking Cox1p, Cox2p, and Cox3p, respectively. Ring formation was not significantly different from wild type in an mss51 or atp10 mutant. The atp10 mutation blocks the interaction of the Atp9p ring with other modules of the ATP synthase. In contrast, ring formation was reduced in a cox6 mutant, consistent with a role of Cox6p in oligomerization of Atp9p. Cox6p involvement in ATP synthase assembly is also supported by studies showing that ring formation in cells adapting from fermentative to aerobic growth was less efficient in mitochondria of the cox6 mutant than the parental respiratory-competent strain or a cox4 mutant. We speculate that the constitutive and Cox6p-independent rate of Atp9p oligomerization may be sufficient to produce the level of ATP synthase needed for maintaining a membrane potential but limiting for optimal oxidative phosphorylation.     

Relationships between some transcription factors and concordantly expressed drought stress-related genes in bread wheat

The challenge of climate change makes it mandatory to improve tolerance to drought stress in bread wheat (Triticum aestivum) via biotechnological approaches. Drought stress experiment was conducted followed by RNA-Seq analysis for leaves of two wheat cultivars namely Giza 168 and Gemmiza 10 with contrasting genotypes. Expression patterns of the regulated stress-related genes and concordantly expressed TFs were detected, then, validated via qPCR for two loss-of-function mutants in Arabidopsis background harboring mutated genes analogue to those in wheat. Drought-stress related genes were searched for concordantly expressed TFs and a total of eight TFs were shown to coexpress with 14 stress-related genes. Among these genes, one TF belongs to the zinc finger protein CONSTANS family and proved via qPCR to drive expression of a gene encoding a speculative TF namely zinc transporter 3-like and two other stress related genes encoding tryptophan synthase alpha chain and asparagine synthetase. Known functions of the two TFs under drought stress complement those of the two concordantly expressed stress-related genes, thus, it is likely that they are related. This study highlights the possibility to utilize metabolic engineering approaches to decipher and incorporate existing regulatory frameworks under drought stress in future breeding programs of bread wheat.     

Consequences of the pathogenic T9176C mutation of human mitochondrial DNA on yeast mitochondrial ATP synthase

Several human neurological disorders have been associated with various mutations affecting mitochondrial enzymes involved in cellular ATP production. One of these mutations, T9176C in the mitochondrial DNA (mtDNA), changes a highly conserved leucine residue into proline at position 217 of the mitochondrially encoded Atp6p (or a) subunit of the F₁F_O-ATP synthase. The consequences of this mutation on the mitochondrial ATP synthase are still poorly defined. To gain insight into the primary pathogenic mechanisms induced by T9176C, we have investigated the consequences of this mutation on the ATP synthase of yeast where Atp6p is also encoded by the mtDNA. In vitro, yeast atp6-T9176C mitochondria showed a 30% decrease in the rate of ATP synthesis. When forcing the F₁F_O complex to work in the reverse mode, i.e. F₁-catalyzed hydrolysis of ATP coupled to proton transport out of the mitochondrial matrix, the mutant showed a normal proton-pumping activity and this activity was fully sensitive to oligomycin, an inhibitor of the ATP synthase proton channel. However, under conditions of maximal ATP hydrolytic activity, using non-osmotically protected mitochondria, the mutant ATPase activity was less efficiently inhibited by oligomycin (60% inhibition versus 85% for the wild type control). Blue Native Polyacrylamide Gel Electrophoresis analyses revealed that atp6-T9176C yeast accumulated rather good levels of fully assembled ATP synthase complexes. However, a number of sub-complexes (F₁, Atp9p-ring, unassembled α-F₁ subunits) could be detected as well, presumably because of a decreased stability of Atp6p within the ATP synthase. Although the oxidative phosphorylation capacity was reduced in atp6-T9176C yeast, the number of ATP molecules synthesized per electron transferred to oxygen was similar compared with wild type yeast. It can therefore be inferred that the coupling efficiency within the ATP synthase was mostly unaffected and that the T9176C mutation did not increase the proton permeability of the mitochondrial inner membrane.     

Nucleo-cytoplasmic interactions affect RNA editing of cox2, atp6 and atp9 in alloplasmic male-sterile rice (Oryza sativa L.) lines

RNA editing plays an important role in the regulation of mitochondrial gene expression in flowering plants. In this study, we examined RNA editing of the mitochondrial genes cox2, atp6 and atp9 in five isonuclear alloplasmic male-sterile lines (IAMSLs) of rice to investigate whether different cytoplasmic types affect RNA editing. Although many editing sites were conserved among the three genes, we found that the editing efficiency of certain sites was significantly different between different IAMSLs or between IAMSLs and their corresponding cytoplasmic donor CMS lines. Furthermore, several editing sites were found to be either present or absent in certain IAMSLs and their corresponding CMS lines. These results indicate that nuclear loci, as well as unknown editing factors within the mitochondria of different cytoplasmic types, may be involved in RNA editing, and they suggest that RNA editing in plant mitochondria is affected by nucleo-cytoplasmic interactions.     

24-Epibrassinolide ameliorates the saline stress and improves the productivity of wheat (Triticum aestivum L.)

Two wheat (Triticum aestivum L.) cultivars, Sids 1 and Giza 168, were grown under non-saline or saline conditions (4.7 and 9.4 dS m⁻¹) and were sprayed with 0.00, 0.05 and 0.10 mg l⁻¹ 24-epibrassinolide (EBL). Salt stress considerably decreased plant productivity, membrane stability index, photochemical reactions of photosynthesis, the content of relative water, chlorophyll and nitrate, the activity of nitrate reductase and carbonic anhydrase and the level of carbohydrate and protein. The reduction was more pronounced in Giza 168. The follow-up treatment with 0.1 mg l⁻¹ EBL detoxified the stress generated by salinity and significantly improved the above parameters, especially in Sids 1. Glycinebetaine concentration was sharply elevated by salt stress and/or EBL treatments, particularly in Sids 1. Salinity increased putrescine level in Sids 1 and Giza 168, however, spermidine and spermine increased in Sids 1 and decreased in Giza 168. Exogenously applied EBL had a varying effect on polyamines pool under saline condition, an increase in putrescine level associated with low contents of spermidine and spermine in Giza 168 was observed, while Sids 1 showed a decrease in putrescine and high increase in spermidine and spermine. EBL prevented diamine oxidase and polyamine oxidase inhibition, indicating a positive correlation between salt tolerance and polyamines accumulation. Obviously, EBL can be a practical strategy toward generating high-yielding plants under saline condition by enhancing carbon and nitrogen metabolisms. This is the first report dealing with EBL effect on polyamines pool under salt stress.     

Yeast cells lacking the mitochondrial gene encoding the ATP synthase subunit 6 exhibit a selective loss of complex IV and unusual mitochondrial morphology

Atp6p is an essential subunit of the ATP synthase proton translocating domain, which is encoded by the mitochondrial DNA (mtDNA) in yeast. We have replaced the coding sequence of Atp6p gene with the non-respiratory genetic marker ARG8m. Due to the presence of ARG8m, accumulation of rho-/rho0 petites issued from large deletions in mtDNA could be restricted to 20-30% by growing the atp6 mutant in media lacking arginine. This moderate mtDNA instability created favorable conditions to investigate the consequences of a specific lack in Atp6p. Interestingly, in addition to the expected loss of ATP synthase activity, the cytochrome c oxidase respiratory enzyme steady-state level was found to be extremely low (<5%) in the atp6 mutant. We show that the cytochrome c oxidase-poor accumulation was caused by a failure in the synthesis of one of its mtDNA-encoded subunits, Cox1p, indicating that, in yeast mitochondria, Cox1p synthesis is a key target for cytochrome c oxidase abundance regulation in relation to the ATP synthase activity. We provide direct evidence showing that in the absence of Atp6p the remaining subunits of the ATP synthase can still assemble. Mitochondrial cristae were detected in the atp6 mutant, showing that neither Atp6p nor the ATP synthase activity is critical for their formation. However, the atp6 mutant exhibited unusual mitochondrial structure and distribution anomalies, presumably caused by a strong delay in inner membrane fusion.     

Photosynthesis in Two Wheat Cultivars Differing in Salt Susceptibility

Salinised (150 mM NaCl for 15 d) roots excised from salt sensitive wheat cultivar Giza 163 showed about 15-fold increase in the ratio of Na/K while salt tolerant Sakha 92 exhibited only 7.5-fold increase compared to their control ratios. Root ratio of saturated/unsaturated fatty acids was stimulated twice in the sensitive cultivar versus 1.7-fold increase in the tolerant ones. Salinity enhanced greatly the accumulation of spermine (Spm) and spermidine (Spd) contents associated with a decrease in putrescine (Put) content in both wheat cultivars. Higher ratios of Spm+Spd/Put associated with lower content of proline and low ethylene evolution were detected in shoots and roots of salt tolerant cultivar. Chlorophyll a/b ratio showed an increase from 1.3 in control of both cultivars to 1.6 and 1.4 in stressed Giza 163 and Sakha 92, respectively. A reduced Hill reaction activity (19 %) was observed in stressed chloroplasts isolated from leaves of the tolerant cultivar versus 40 % inhibition in the sensitive ones. Moreover, chloroplasts isolated from stressed leaves of the sensitive cultivar showed about 25 % reduction in fluorescence emission at 685 nm as well as shifts in the peaks in the visible region.     

24-Epibrassinolide alleviates salt-induced inhibition of productivity by increasing nutrients and compatible solutes accumulation and enhancing antioxidant system in wheat (Triticum aestivum L.)

Two wheat (Triticum aestivum L.) cultivars, Sids 1 and Giza 168, were grown under non-saline or saline conditions (4.7 and 9.4 dS m^?1) and were sprayed with 0.00, 0.05 and 0.10 mg l^?1 24-epibrassinolide (EBL). Salt stress markedly decreased plant productivity and N, P, and K uptake, particularly in Giza 168. A follow-up treatment with 0.1 mg l^?1 EBL detoxified the stress generated by salinity and considerably improved the above parameters, especially in Sids 1. Organic solutes (soluble sugars, free amino acids, proline and glycinebetaine), antioxidative enzymes (superoxide dismutase, peroxidase, catalase and glutathione reductase), antioxidant molecules (glutathione and ascorbate) and Ca and Mg levels were increased under saline condition, and these increases proved to be more significant in salt-stressed plants sprayed with EBL, particularly at 0.1 mg l^?1 EBL with Sids 1. Sodium concentration, lipid peroxidation, hydrogen peroxide content and electrolyte leakage were increased under salt stress and significantly decreased when 0.1 mg l^?1 EBL was sprayed. Clearly, EBL alleviates salt-induced inhibition of productivity by altering the physiological and biochemical properties of the plant.     

Effect of salinity on germination characters and seedlings parameters of Egyptian flax cultivars growing in Nyiregyhaza

In the recent years using non-traditional sources, i.e. saline water in irrigation becomes essential. Overcoming the toxic effects of salinity stress and improving salt tolerance is consider one of the challenges for enhancing germination, seedling characters and biochemical analysis. Therefore, a laboratory experiment was conducted to study the response of seven Egyptian flax cultivars i.e. (Giza 9, Giza 10, Giza 11, Giza 12, Sakha 2, Sakha 5 and Sakha 6) germinated under five salinity stress i.e. (control, 3, 6, 9 and 12?dS?m^?1) at Research Institute of Nyiregyhaza using Factorial Experimental in Randomized Complete Block Design (RCBD) with four replications. The following results were recorded: Tested Egyptian flax cultivars significantly varied for germination characters, seedling properties and chemical analysis. Giza 11 exceeded recorded the maximum values of germination and seedling characters, potassium and proline content compared with the other studied cultivars. Increasing salinity stress up to 12?dS?m^?1 significantly affected germination characters, seedlings parameters and chemical analysis. In general, Giza 11 cultivar substantiated best at high level of salinity stress compared with other studied cultivars. Furthermore, produced the lowest values of Na⁺ content.     

High Salt and High pH Tolerance of New Isolated Rhizobium etli Strains from Egyptian Soils

Saline and alkaline soils are major problems contributing to the low productivity of common bean (Phaseolus vulgaris) in arid and semi-arid regions such as Egypt. Therefore our study was directed toward selecting strains more tolerant to these environmental stresses. Among seven Rhizobium etli strains isolated from Egyptian soils, we found a high degree of diversity. Strains EBRI 21 and EBRI 26 are highly tolerant to a salt concentration up to 4% NaCl. A positive correlation was found between the salt tolerance and the adaptation to alkaline pH (9). Strains EBRI 2 and EBRI 26 were adapted to elevated temperatures (42°C). The minimum level of low pH for the majority of Rhizobium etli strains from Egypt was pH 4.7 while the Colombian strain Rhizobium tropici CIAT 899 survived well at pH 4. At 0.4% NaCl, the symbiotic efficiency of the salt-tolerant strain EBRI 26 was superior in cultivar Giza 6 compared with the salt-sensitive strain EBRI 2 (18.2 compared with 13.9 nM C₂H₄ h^–1 mg^–1 nodule fresh weight). In the bean cultivar Saxa, nitrogen fixation was much more affected by high salt concentration (0.4% NaCl) than in the cultivar Giza 6 with both strains (3.9 and 3.8 nM C₂H₄ h^–1 mg^–1 nodule fresh weight, respectively). In general, stress of alkalinity had a less detrimental effect on nodulation and N₂ fixation than stress of salinity.