Evidence of Atlantic bluefin tuna spawning in the Bay of Biscay,north-eastern Atlantic

The spawning grounds of the Atlantic bluefin tuna (Thunnus thynnus) are traditionally considered to be the Gulf of Mexico (Gulf of Mexico) and the Mediterranean Sea (Mediterranean Sea). However, for the western Atlantic, unequivocal evidence of bluefin spawning outside the Gulf of Mexico has been shown. In this study we present the first records of genetically confirmed bluefin larvae in the southern Bay of Biscay (eastern Atlantic). These findings provide evidence of bluefin spawning activity outside the Mediterranean Sea, in the north-eastern Atlantic. However, our results suggest that the bluefin spawning in the Bay of Biscay is a sporadic phenomenon.     

Corallite wall and septal microstructure in scleractinian reef corals: Comparison of molecular clades within the family Faviidae

Recent molecular phylogenies conflict with traditional scleractinian classification at ranks ranging from suborder to genus, challenging morphologists to discover new characters that better agree with molecular data. Such characters are essential for including fossils in analyses and tracing evolutionary patterns through geologic time. We examine the skeletal morphology of 36 species belonging to the traditional families Faviidae, Merulinidae, Pectiniidae, and Trachyphylliidae (3 Atlantic, 14 Indo‐Pacific, 2 cosmopolitan genera) at the macromorphological, micromorphological, and microstructural levels. Molecular analyses indicate that the families are not monophyletic groups, but consist of six family‐level clades, four of which are examined [clade XV = Diploastrea heliopora; clade XVI = Montastraea cavernosa; clade XVII (“Pacific faviids”) = Pacific faviids (part) + merulinids (part) + pectiniids (part) + M. annularis complex; clade XXI (“Atlantic faviids”) = Atlantic faviids (part) + Atlantic mussids]. Comparisons among molecular clades indicate that micromorphological and microstructural characters (singly and in combination) are clade diagnostic, but with two exceptions, macromorphologic characters are not. The septal teeth of “Atlantic faviids” are paddle‐shaped (strong secondary calcification axes) or blocky, whereas the septal teeth of “Pacific faviids” are spine‐shaped or multidirectional. Corallite walls in “Atlantic faviids” are usually septothecal, with occasional trabeculothecal elements; whereas corallite walls in “Pacific faviids” are usually trabeculothecal or parathecal or they contain abortive septa. Exceptions include subclades of “Pacific faviids” consisting of a) Caulastraea and Oulophyllia (strong secondary axes) and b) Cyphastrea (septothecal walls). Diploastrea has a diagnostic synapticulothecal wall and thick triangular teeth; Montastraea cavernosa is also distinct, possessing both “Pacific faviid” (abortive septa) and “Atlantic faviid” (paddle‐shaped teeth) attributes. The development of secondary axes is similar in traditional Atlantic faviids and mussids, supporting molecular results placing them in the same clade. Subclades of “Pacific faviids” reveal differences in wall structure and the arrangement and distinctiveness of centers of rapid accretion. J. Morphol. 272:66–88, 2011. © 2010 Wiley‐Liss, Inc.     

Live benthic foraminiferal faunas along a bathymetrical transect (140-4800 m) in the Bay of Biscay (NE Atlantic)

In a 10-stations bathymetrical transect in the Bay of Biscay, we observed important changes in the density, composition and microhabitats of live foraminiferal faunas from the outer continental shelf to the abyssal plain. Four zones are recognised: (1) at the upper continental shelf (140 m water depth), foraminiferal densities are very high and the superficial sediment is occupied by Bolivina subaenariensis and Valvulineria bradyana. Globobulimina spp., Chilostomella oolina and Nonion fabum dominate the infaunal niches, which are positioned close to the sediment-water interface due to a strong compaction of the vertical succession of redox zones. (2) At the upper continental slope stations (300-1000 m), foraminiferal densities are high and the superficial sediments are dominated by Uvigerina mediterranea/peregrina. Deeper in the sediment, intermediate infaunal niches are occupied by Melonis barleeanus. Due to a deeper oxygen penetration, the deep infaunal taxa Globobulimina spp. and C. oolina live at a considerable depth in the sediment. (3) At the mid and lower slope stations (1000-2000 m) in the superficial sediment Cibicidoides kullenbergi and Hoeglundina elegans progressively replace U. mediterranea. U. peregrina is still a dominant taxon, reflecting its preference for a somewhat intermediate organic flux level. Deep infaunal taxa become increasingly rare. (4) At the lower slope and abyssal plane stations (deeper than 2000 m), faunal densities are very low and the fauna is composed exclusively by shallow infaunal species, such as Nuttallides umboniferus and Melonis pompilioides. The foraminiferal data together with the pore water data in the sediment give evidence of the presence of a trophic gradient from very eutrophic settings at the upper continental shelf towards oligotrophic settings at the abyssal area.     

Growth of young-of-the-year mackerel in the Bay of Biscay

The first growth season of young-of-the-year (0+ year) mackerel Scomber scombrus , sampled in the Bay of Biscay, was parameterized to determine growth patterns. Daily increments were identified on sagittae otoliths, for calculation of age and growth of 92 larvae and 54 juveniles over the range 3·6–215·0 mm standard length ( L _S). A Gompertz curve was fitted to the length-at-age data. At the end of the first year of growth L _S was 194·2 mm, with a maximum growth increment of c . 2 mm day⁻¹, observed 62 days after hatching. Backcalculated growth increments for mackerel juveniles, during their larval stage, were higher than those observed for sampled larvae; only 10·9% of sampled larvae were estimated to survive. Growth for north-eastern Atlantic mackerel was slower than that published for north-western Atlantic mackerel. Backcalculated hatching dates for mackerel were consistent with the typical temporal distribution of mackerel spawning in the Bay of Biscay.     

Morphology and sedimentology of (clustered) cold-water coral mounds at the south Rockall Trough margins,NE Atlantic Ocean

Cold-water coral mounds on both margins of the Rockall Trough (NE Atlantic Ocean) have a strongly different morphology. Single, isolated mounds occur on the SE margin and are mainly found on the upper slope between 900 and 650 m water depth, while large mound clusters are found on the SW margin in water depths between 600 and 1,000 m, in a narrow zone almost parallel to the slope. Sedimentation rates on the mounds are higher than on the surrounding seabed as a result of baffling of biogenic carbonate debris and siliciclastic particles by the coral framework covering the mounds. This is confirmed by ²¹⁰Pb measurements. The individual coral growth rate can be three times higher then the vertical growth rate of the coral cover (±10 mm year⁻¹) which in turn is more than an order of magnitude higher then the present-day overall mound growth rate (±0.25 mm year⁻¹). The presence of extensive hardgrounds and firmgrounds and the three-dimensional coral framework are considered to be responsible for the stability of the relatively steep slopes of the mounds. High current velocities in the intramound areas result in local non-sedimentation and erosion, as is shown by the presence of IRD (ice-rafted debris) lag deposits on the seabed and moats around some of the mounds. The morphology and sedimentology of cold-water coral-covered (mainly Lophelia pertusa and Madrepora oculata) mounds on the southern Rockall Trough margins (NE Atlantic Ocean) is discussed and a model describing the development of these mounds is presented.     

Competitive strategies of soft corals (Coelenterata: Octocorallia). II. Variable defensive responses and susceptibility to scleractinian corals

Interactions involving competition for space between several species of alcyonacean and scleractinian corals were assessed experimentally on Britomart Reef, central region of the Great Barrier Reef, Australia. Colonies of three soft coral species, Sarcophyton ehrenbergi Marenzeller, Nephthea brassica Kukenthal, and Capnella lacertiliensis Macfayden Forskal (Coelenterata:Alcyonacea) were relocated within stands of two scleractinian corals, Parités andrewsi Vaughan (= P. cylindrica Dana) and Pavona cactus Förskal (Coelenterata:Scleractinia). Undisturbed scleractinian and relocated alcyonacean controls were also monitored.Alcyonacean corals induced necrosis of tissue in scleractinian corals. Necrosis was significantly more pronounced when colonies were in contact but was also observed in the absence of contact, implicating the presence of active allelopathic agents. Scleractinian coral species varied in their susceptibility to the ill effects of alcyonaceans, with Pontes andrewsi being more susceptible than Pavona cactus. Of the soft corals, Nephthea caused the highest degree of mortality in the two scleractinian corals examined and Sarcophyton the least. Some soft corals appear to retain their toxins while others release them, implying a combination of anti-predatory and anti-competitor roles for the secondary metabolites. Scleractinian corals were often overgrown by soft corals.Both species of scleractinian corals were found to cause approximately equal amounts of tissue necrosis in alcyonaceans. These effects were more pronounced when colonies were in direct contact. The necrotic effects among alcyonacean corals were species-specific. Alcyonaceans also overgrew scleractinian corals and secreted a protective polysaccharide layer in areas proximal to scleractinians. Secretion of this layer was stimulated differentially by the two scleractinian species and also varied in frequency of occurrence among the alcyonaceans.High levels of tissue necrosis were observed in both groups of organisms within 3 wk of initiation of the experiment. Necrosis increased with time in the scleractinian corals and decreased in the alcyonaceans. The development of a protective polysaccharide layer in the alcyonaceans increased with time.     

A management approach for the ecological integrity of NE Atlantic estuaries

A method to evaluate the ecological integrity of estuaries at a biogeographical scale is presented. Based on a conceptualisation which systematically establishes how human uses and stressors affect ecosystem functioning, the method allows for regional evaluations of the effect produced by human impacts on the ecological integrity. Comparisons across nine medium size estuaries (Bay of Biscay) showed major alterations in the connectivity (>65% of estuaries) and tidal dynamics (>55% of estuaries) in NE Atlantic estuaries. Likewise, the results obtained highlighted physical barriers such as dykes and land reclamation as the main hydromorphological stressors threatening the ecological integrity. The methodological approach was validated at a restored estuary. The validation primarily confirmed the ability of the conceptual model to identify the main stressors threatening the ecological integrity in estuaries. Secondly, it allowed the identification of the most suitable restoration solutions. Thirdly, it emphasised the importance of the hydrological dynamics to recover the ecosystem's ecological integrity.     

Contribution of Ciliated Microprotozoans and Dinoflagellates to the diet of three Copepod species in the Bay of Biscay

Predation of three calanoid copepods (Calanus helgolandicus, Temora longicornis and Centropages chierchiae) on phytoplankton, dinoflagellates and ciliates was estimated in the Gironde estuarine plume (Bay of Biscay) during winter by means of in situ incubations. Both phytoplankton and ciliates were part of the diet of those three species, while only Centropages chierchiae also included a significant portion of dinoflagellates in its diet. The clearance rates of Calanus helgolandicus for ciliates and phytoplankton reached 2.8 and 4.0 ml copepod^–1 h^–1, respectively, those of Temora longicornis were 3.2 and 1.8 ml copepod^–1 h^–1, and those of Centropages chierchiae were 4.3 and 0.8 ml copepod^–1 h^–1.Neither Calanus helgolandicus nor Temora longicornis selected dinoflagellates, given the low clearance rates measured for this prey category (0.05 and 0.03 ml copepod^–1 h^–1, respectively). By contrast, Centropages chierchiae included dinoflagellates in its diet, with a clearance rate of 4.9 ml copepod^–1 h^–1. Within a given prey category (ciliates or dinoflagellates), all three copepods selected larger prey types (>40 m) over smaller ones (40 m). This implies a better detection and capture of larger motile prey compared to small ones. The results are discussed with regard to the omnivorous feeding behavior of these copepods observed here, during a late winter phytoplankton bloom.     

A foraminifera-based transfer function as a tool for sea-level reconstructions in the southern Bay of Biscay

A foraminifera-based transfer function has been developed using a modern dataset of 46 samples and 23 species obtained from four Basque marshes in Northern Spain. The relationship between observed and foraminifera-predicted elevation illustrated the strong performance of the transfer function (). Indeed, these results indicate that precise reconstructions of former sea levels are possible (RMSEP_jack = 0.27 m). The precision of the transfer function is comparable to other foraminifera-based transfer functions from the northern Atlantic Ocean. This is even more important considering that sampling procedures did not involve taking samples along transects that reflect the elevational gradient of concern. Instead, sampling was performed randomly to avoid possible correlation between the different variables controlling the foraminiferal distribution (e.g., elevation and salinity). This transfer function has been constructed including agglutinated and calcareous foraminifera with the aim of increasing the range of sedimentary environments that can yield relative sea-level (RSL) data, and providing improved quantitative reconstructions with defined error terms in a region (Bay of Biscay) where highest marsh surfaces are under-represented in late Holocene sedimentary sequences.     

Contribution of small mountainous rivers to particulate organic carbon input in the Bay of Biscay

The Nivelle River, a typical Pyrenean mountainous watershed reaching the Bay of Biscay (Atlantic Ocean), was sampled with high resolution during 1996. The particulate organic carbon (POC) contents during successive floods shows that there is a graduated impoverishment of the organic fraction of suspended particulate matter (SPM) from the first flood to the next ones, reaching a threshold value (3%) attributed to allochtonous fraction (soil). On the basis of the high frequency data of water discharge and POC concentration, an annual POC flux was established: 845 tons, corresponding to a specific POC flux of 5.3 tC km⁻² yr⁻¹. This value was obtained during a dry period and must be considered as a minimum value for longer time scale. The POC originated mostly from soil (55%) and riparian/litter (~40%) with a very minor (<5%) contribution of autochthonous POC. Thirty-two percent of the annual POC flux was carried in 1% of time and 66% in 10% of time. The specific POC yield, 5.3 tC km⁻² yr⁻¹, if extended to the whole mountainous area of the southern coast of the Bay of Biscay (19,000 km²), leads to an estimated POC flux around 100,000 t yr⁻¹. Although small Cantabrian mountainous rivers contributed to only 28% of the freshwater discharge in the Bay of Biscay, their POC load was estimated to account for 70% of the total POC inputs in the Bay.     

New records of ahermatypic scleractinian corals from the Kuril Islands

Four species of caryophyllid scleractinians, Caryophylla ambrosia, C. scobinosa, C. alaskensis, and Polymyces montereyensis, were recorded for the first time in the Sea of Okhotsk off the Kuril Islands. These findings extend the range for the species, of which three had previously been considered to be restricted to the tropical and warm Indopacific waters. These data will supplement regional reports on the bottom fauna of the most fertile and extensively commercially exploited continental shelf region of the North Pacific.Original Russian Text Copyright © 2004 by Biologiya Morya, Latypov.     

Reproductive strategy and spawning activity of the European hake Merluccius merluccius (L.) in the Bay of Biscay

Histological examination of ovaries from European hake Merluccius merluccius from the Bay of Biscay sampled on a monthly basis from December 1996 to October 1997 demonstrated that European hake exhibit indeterminate fecundity. Oocyte development is asynchronous with a continuous oocyte size-frequency distribution in prespawning, spawning and postspawning females, and a gradual decrease in the mean diameter of advanced yolked oocytes as spawning proceeds. Spawning European hake were observed throughout the 11 month study period. The spawning fraction ranged from 0·085 to 0·207, which is equivalent to a batch interval of 5–12 days. The spawning fraction and proportion of spawning females were highest from January to March. Seasonal variation of atresia was inversely related to spawning fraction. Extensive atresia in individual fish was observed in September and October, when the spawning fraction was low.     

Histological data in a combined phylogenetic analysis of scleractinian reef corals

Scleractinian systematics have undergone rapid changes due to increased use of molecular phylogenetics and new perspectives on skeletal morphology from micromorphology and microstructure. Despite this increase in characters there are still unresolved clades in the phylogeny, indicating that more characters are needed. This study investigates a new source of morphological data within the soft tissue of Indo‐Pacific scleractinian corals. Features of tissue layers, especially cnidocytes, are described in hematoxylin and eosin stained thin sections. Based on this new histological data source, a combined analysis with mitochondrial DNA and skeletal data is performed using parsimony and Bayesian analysis. Parsimony analysis yields three most‐parsimonious trees similar to trees based on Bayesian analysis. Character maps are also produced that show origination of histomorphological traits at deep nodes within the phylogeny. In general, both analyses retain the previously designated families Lobophylliidae and Merulinidae, but some genera are found to be paraphyletic. Nonetheless, the combined analysis produces a highly resolved and well‐supported phylogeny, which could lead to more effective use of biological conservation metrics based on evolutionary distinctiveness. These results show for the first time that inclusion of histomorphological characters improves the resolution of phylogenetic analyses of reef corals. J. Morphol. 277:494–511, 2016. © 2016 Wiley Periodicals, Inc.     

Isolation of microsatellite loci from the scleractinian corals,Montastraea cavernosa and Porites astreoides

The ability to assess genetic variation is critical for determining genetic diversity and population structure. In corals, slow evolutionary rates in mitochondrial genomes have left allozymes as the only markers presently available to investigate patterns of intraspecific genetic variation. Characteristics of microsatellites render them more informative than allozymes for such analyses; however, few coral microsatellites are available. This study describes polymorphic microsatellite loci isolated from two scleractinian coral species. Most loci exhibit significant heterozygote deficiencies, likely due to nonrandom mating or Wahlund effects. These markers are being used to investigate gene flow among populations, providing insight into reef connectivity.     

Seasonal variation in egg production and batch fecundity of European hake Merluccius merluccius (L.) in the Bay of Biscay

Sexually mature female hake Merluccius merluccius with hydrated ovaries were sampled on a monthly basis in the Bay of Biscay, from May 1996 to October 1997 and from March to April 1998. The batch fecundity was positively related to total length. The relative batch fecundity ( F _Brel) varied significantly among months and years, but not between areas, i.e. International Council for the Exploration of the Sea Divisions VIIIa and VIIIb within the Bay of Biscay. Two levels of F _Brel were found in 1997: the highest between January and April (mean ± s . e . 167 ± 5 eggs g⁻¹) and the lowest from May to October (112 ± 3 eggs g⁻¹). Population condition factor and gonado-somatic indices ( I _G) followed the expected trend in relation to the monthly changes in F _Brel during 1997. The F _Brel variation between years was 9% for 1996–1997 and 28% for 1997–1998, and the difference of the I _G was c. 14 and 36%, respectively. Population relative egg production varied from a high value in January to March (985 eggs g⁻¹) to a low egg production between April and October 1997 (445 eggs g⁻¹).     

造礁石珊瑚对低温的耐受能力及响应模式

通过实验室生态模拟,研究了低温胁迫下三亚湾5种造礁石珊瑚（十字牡丹珊瑚、佳丽鹿角珊瑚、花鹿角珊瑚、强壮鹿角珊瑚、澄黄滨珊瑚）的耐受性,分析了造礁石珊瑚对低温的响应模式.结果表明：造礁石珊瑚耐受低温能力与其骨骼类型有关,枝状珊瑚最先死亡,块状珊瑚的耐受能力明显高于枝状珊瑚;14 ℃持续3 d是三亚湾枝状造礁石珊瑚的致死低温;14 ℃持续3 d为块状澄黄滨珊瑚的致白化低温;12 ℃持续10 d为叶片状十字牡丹珊瑚的致死温度;块状澄黄滨珊瑚受到低温胁迫时表面形成粘膜,阻止了珊瑚进一步排出共生虫黄藻. 耐高温的珊瑚对低温也表现出较强的耐受能力,珊瑚对低温胁迫的响应模式与对高温的响应模式基本一致, 即珊瑚首先不伸展触手,紧接着不断释放粘液并排出共生藻,最后白化、死亡.     

A computational method for quantifying morphological variation in scleractinian corals

Morphological variation in marine sessile organisms is frequently related to environmental factors. Quantifying such variation is relevant in a range of ecological studies. For example, analyzing the growth form of fossil organisms may indicate the state of the physical environment in which the organism lived. A quantitative morphological comparison is important in studies where marine sessile organisms are transplanted from one environment to another. This study presents a method for the quantitative analysis of three-dimensional (3D) images of scleractinian corals obtained with X-ray Computed Tomography scanning techniques. The advantage of Computed Tomography scanning is that a full 3D image of a complex branching object, including internal structures, can be obtained with a very high precision. There are several complications in the analysis of this data set. In the analysis of a complex branching object, landmark-based methods usually do not work and different approaches are required where various artifacts (for example cavities, holes in the skeleton, scanning artifacts, etc.) in the data set have to be removed before the analysis. A method is presented, which is based on the construction of a medial axis and a combination of image-processing techniques for the analysis of a 3D image of a complex branching object where the complications mentioned above can be overcome. The method is tested on a range of 3D images of samples of the branching scleractinian coral Madracis mirabilis collected at different depths. It is demonstrated that the morphological variation of these samples can be quantified, and that biologically relevant morphological characteristics, like branch-spacing and surface/volume ratios, can be computed. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Warming and exponential abundance increase of the subtropical fish Capros aper in the Bay of Biscay (1973-2002)

The exponential abundance increase of a sub-tropical species, boarfish (Capros aper), as well as the sea bottom temperature increase in the continental shelf of the Bay of Biscay (France) over the three last decades are reported. This species was rare in the seventies and is now a dominant one. This is a small bathy-demersal, probably short-lived species with few predators (probably because of the presence of strong spines) and not exploited by fisheries. In the same time, a significant temperature increase in the bottom waters is observed during the breeding season of this population. The boarfish abundance increase is related to the warming, its ability to invade and the absence of predators as well as the absence of fishing.     

Searching for new morphological characters in the systematics of scleractinian reef corals: comparison of septal teeth and granules between Atlantic and Pacific Mussidae

Recent molecular analyses have challenged the traditional classification of scleractinian corals at all taxonomic levels suggesting that new morphological characters are needed. Here we tackle this problem for the family Mussidae, which is polyphyletic. Most of its members belong to two molecular clades composed of: (1) Atlantic Mussidae and Faviidae (except Montastraea) and (2) Pacific Mussidae (Cynarina, Lobophyllia, Scolymia, Symphyllia) and Pectiniidae. Other Pacific mussids (e.g. Acanthastrea) belong to additional clades. To discover new characters that would better serve as phylogenetic markers, we compare the skeletal morphology of mussid genera in different molecular‐based clades. Three sets of characters are considered: (1) macromorphology (budding; colony form; size and shape of corallites; numbers of septal cycles), (2) micromorphology (shapes and distributions of septal teeth and granules), and (3) microstructure (arrangement of calcification centres and thickening deposits within costosepta). Although most traditional macromorphological characters exhibit homoplasy, several new micromorphological characters are effective at distinguishing clades, including the shapes and distribution of septal teeth and granules, the area between teeth, and the development of thickening deposits. Arrangements of calcification centres and fibres differ among clades, but the fine‐scale structure of thickening deposits does not.