Studies in the morphology and systematics of berberidaceae

The floral vasculature in three allied genera,Plagiorhegma, Jeffersoria andAchyls is investigated, and the results are compared with those ofEpimedium andVancouveria which are related closely toPlagiorhegma andJeffersonia. The vasculature in the receptacle ofPlagiorhegma andJeffersonia is similar, but that ofAchlys is much simpler. Slightly different trace patterns are observed in the sepals ofPlagiorhegma andJeffersonia. InJeffersonia, the 3-trace condition leaving 2 or 3 gaps is most frequently observed, but inPlagiorhegma traces of a double nature leaving a single gap are more frequent. The traces to the innermost sepals, petals and stamens are usually of a double nature leaving a single gap in both genera. Regular division and fusion are not observed in the receptacular stele. The vascular differentiation between sepals and petals is more advanced inPlagiorhegma andJeffersonia than inEpimedium andVancouveria. InAchlys, the traces are all staminal and single throughout their course. Two parts recognized in the pistils ofPlagiorhegma, Jeffersonia andAchlys are traversed by independent vasculature. The comparisons of pistil morphology including vasculature ofPlagiorhegma, Jeffersonia, Achlys, Epimedium andVancouveria lead to the interpretation that the pistils are based on the same morphological plan. The probable evolutionary trend in pistil is then suggested in these five genera.     

Genetic polymorphism for cyanogenesis and linkage at the linamarase locus in Trifolium nigrescens Viv. subsp. nigrescens

Polymorphisms at two genetic loci conditioning the cyanogenic glucoside linamarin (Ac) and the glucosidase linamarase (Li) are reported for the first time in Trifolium nigrescens Viv. subspecies nigrescens (2n=2x=16). T. nigrescens is one of several possible ancestral species that may have donated a genome to the allotetraploid species white clover (T. repens L., 2n=4x=32). T. nigrescens is a strong candidate because it is the only very close relative that, like white clover, is cyanogenic. Genetic analysis showed that in T. nigrescens, cyanogenesis was inherited as a two-locus genetic system in a similar way to that in white clover. Furthermore, Li, which is linked to the locus Sdh (shikimate dehydrogenase, SDH) at a distance of 6 cM in one genome of white clover, also showed linkage (12 cM) in T. nigrescens. It is concluded that one of the subspecies of T. nigrescens is a likely donor of a genome to white clover. Received: 27 December 2000 / Accepted: 12 April 2001     

Three genes encode 3-hydroxy-3-methylglutaryl-coenzyme A reductase in Hevea brasiliensis: hmg1 and hmg3 are differentially expressed

The enzyme 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMGR) catalyses an important step in isoprenoid biosynthesis in plants. In Hevea brasiliensis, HMGR is encoded by a small gene family comprised of three members, hmg1, hmg2 and hmg3. We have previously described hmg1 and hmg2 (Plant Mol Biol 16: 567–577, 1991). Here we report the isolation and characterization of hmg3 genomic and cDNA clones. In comparison to hmg1 which is more highly expressed in laticifers than in leaves, the level of hmg3 mRNA level is equally abundant in laticifers and leaves. In situ hybridization experiments showed that the expression of hmg3 is not cell-type specific while hmg1 is expressed predominantly in the laticifers. Primer-extension experiments using laticifer RNA showed that hmg1 is induced by ethylene while hmg3 expression remains constitutive. The hmg3 promoter, like the promoters of most house-keeping genes, lacks a TATA box. Our results suggest that hmg1 is likely to encode the enzyme involved in rubber biosynthesis while hmg3 is possibly involved in isoprenoid biosynthesis of a housekeeping nature.     

Molecular phylogeny of Macrolycus (Coleoptera: Lycidae) with description of new species from China

Macrolycus is a genus of net‐winged beetles with 69 species distributed in the eastern Palearctic and northernmost part of the Oriental region. The first molecular phylogeny of Macrolycus was produced using an rrnL + tRNA‐Leu + nad1 mtDNA fragment. The major lineages and species limits were identified with morphology and molecular data. We propose that Cerceros is a subgenus of Macrolycus to enable identification of all adult specimens in the genus without DNA sequencing. Two species groups are proposed in Macrolycus s. str. and six in Cerceros. Additionally, twelve Macrolycus species are newly described from China: M. aquilinus, M. baihualingensis, M. bicolor, M. guangxiensis, M. jianfenglingensis, M. kuatunensis, M. lizipingensis, M. parvus, M. phoeniceus, M. rhodoneurus, M. rosaceus and M. sichuanensis. Macrolycus holzschuhi is proposed to be a junior subjective synonym of M. jeanvoinei. The highest diversity of Macrolycus is found in southern China. The species from the main islands of Japan are placed in two species groups: M. excellens is a sister to remaining species of the M. murzini group and the M. flabellatus group is a monophylum of closely related species in a sister position to the M. bicolor group.     

Infrageneric classification of the genusEleutherococcus maxim. (Araliaceae) with a new sectionCissifolius

The genusEleutherococcus Maxim, is divided into five sections based on the morphology;Eleutherococcus, Cissifolius C.H. Kim and B.-Y. Sun (sect, nov.),Acanthopanax (Decne. & Planch.) H. Ohashi,Cephalopanax (Baill.) H. Ohashi andZanthoxylopanax (Harms) H. Ohashi. SectionAcanthopanax is further divided into two subsections;Acanthopanax andIonostachyae (Nakai) C.H. Kim & B.-Y Sun (comb. nov.). The new sectCissifolius is distinguished from others in having five fused carpels with free styles, solitary umbels at the end of branches, dioecious sexuality, and absence of tufted hairs in abaxial surface of leaf veins. The new section is most closely related toAcanthopanax in having free styles, solitary umbels, and dioecious sexuality. It is also related toEleutherococcus in having five carpels and lacking tufted hairs on abaxial surface of leaves. SectionCephalopanax shares all characteristics other than the number of carpels withEleutherococcus. SectionZanthoxylopanax is closely related toAcanthopanax in having two carpels with free styles, while it is also related toCephalopanax by having bisexual flowers and umbels arranged in a simple cyme. Considering the evolutionary trend in the family Araliaceae, five-carpellate sectionsEleutherococcus andCissifolius are more primitive than two-carpellate sectionsAcanthopanax, Cephalopanax, andZanthoxylopanax. SectionZanthoxylopanax seems to be intermediate betweenAcanthopanax andCephalopanax.     

Expression of the apoptosis inducer gene head involution defective in primordial germ cells of the Drosophila embryo requires eiger,p53, and loki function

Nanos (Nos) is an evolutionarily conserved protein essential for the maintenance of primordial germ cells (PGCs). In Drosophila, the PGCs or pole cells express head involution defective (hid), which is required for caspase activation, but its translation is repressed by maternal Nos. In the absence of Nos activity, translation of hid mRNA into protein induces apoptosis in pole cells. However, it remains unclear how hid mRNA is regulated in pole cells. Here, we report that hid expression requires eiger (egr), a tumor necrosis factor ligand (TNF) homologue, which is induced in pole cells by decapentaplegic (dpp). In addition, we demonstrate that p53 and loki (lok), a damage‐activated kinase known to be required for p53 phosphorylation, are both required for hid expression in pole cells. Since maternal lok mRNA is enriched in pole cells, it is possible that ubiquitously distributed p53 is activated in pole cells by maternal Lok. We propose that hid expression is activated in a pole cell‐specific manner by loki/p53 and dpp/egr during embryogenesis.     

Linkage of autophagy to fungal development,lipid storage and virulence in Metarhizium robertsii

Autophagy is a highly conserved process that maintains intracellular homeostasis by degrading proteins or organelles in all eukaryotes. The effect of autophagy on fungal biology and infection of insect pathogens is unknown. Here, we report the function of MrATG8, an ortholog of yeast ATG8, in the entomopathogenic fungus Metarhizium robertsii. MrATG8 can complement an ATG8-defective yeast strain and deletion of MrATG8 impaired autophagy, conidiation and fungal infection biology in M. robertsii. Compared with the wild-type and gene-rescued mutant, Mratg8Δ is not inductive to form the infection-structure appressorium and is impaired in defense response against insect immunity. In addition, accumulation of lipid droplets (LDs) is significantly reduced in the conidia of Mratg8Δ and the pathogenicity of the mutant is drastically impaired. We also found that the cellular level of a LD-specific perilipin-like protein is significantly lowered by deletion of MrATG8 and that the carboxyl terminus beyond the predicted protease cleavage site is dispensable for MrAtg8 function. To corroborate the role of autophagy in fungal physiology, the homologous genes of yeast ATG1, ATG4 and ATG15, designated as MrATG1, MrATG4 and MrATG15, were also deleted in M. robertsii. In contrast to Mratg8Δ, these mutants could form appressoria, however, the LD accumulation and virulence were also considerably impaired in the mutant strains. Our data showed that autophagy is required in M. robertsii for fungal differentiation, lipid biogenesis and insect infection. The results advance our understanding of autophagic process in fungi and provide evidence to connect autophagy with lipid metabolism.     

Distinct expression patterns for two Xenopus Bar homeobox genes

The BarH1 and BarH2 homeobox genes are coexpressed in cells of the fly retina and in the central and peripheral nervous systems. The fly Bar genes are required for normal development of the eye and external sensory organs. In Xenopus we have identified two distinct vertebrate Bar-related homeobox genes, XBH1 and XBH2. XBH1 is highly related in sequence and expression pattern to a mammalian gene, MBH1, suggesting that they are orthologues. XBH2 has not previously been identified but is clearly related to the Drosophila Bar genes. During early Xenopus embryogenesis XBH1 and XBH2 are expressed in overlapping regions of the central nervous system. XBH1, but not XBH2, is expressed in the developing retina. By comparing the expression of XBH1 with that of hermes, a marker of differentiated retinal ganglion cells, we show that XBH1 is expressed in retinal ganglion cells during the differentiation process, but is down-regulated as cells become terminally differentiated. Received: 12 August 1999 / Accepted: 5 October 1999     

Evolution of <Emphasis Type="Italic">Hox3</Emphasis> and <Emphasis Type="Italic">ftz</Emphasis> in arthropods: insights from the crustacean <Emphasis Type="Italic">Daphnia pulex</Emphasis>

The Drosophila melanogaster genes zerknüllt (zen) and fushi tarazu (ftz) are members of the Hox gene family whose roles have changed significantly in the insect lineage and thus provide an opportunity to study the mechanisms underlying the functional evolution of Hox proteins. We have studied the expression of orthologs of zen (DpuHox3) and ftz (Dpuftz) in the crustacean Daphnia pulex (Branchiopoda), both of which show a dynamic expression pattern. DpuHox3 is expressed in a complex pattern in early embryogenesis, with the most anterior boundary of expression lying at the anterior limit of the second antennal segment as well as a ring of expression around the embryo. In later embryos, DpuHox3 expression is restricted to the mesoderm of mandibular limb buds. Dpuftz is first expressed in a ring around the embryo following the posterior limit of the mandibular segment. Later, Dpuftz is restricted to the posterior part of the mandibular segment. This is the first report of expression of a Hox3 ortholog in a crustacean, and together with Dpuftz data, the results presented here show that Hox3 and ftz have retained a Hox-like expression pattern in crustaceans. This is in accordance with the proposed model of Hox3 and ftz evolution in arthropods and allows a more precise pinpointing of the loss of ftz “Hox-like behaviour”: in the lineage between the Branchiopoda and the basal insect Thysanura.     

Genetic interactions suggest that Danforth's short tail (Sd) is a gain-of-function mutation

Danforth's short tail (Sd) is a semidominant mutation on mouse chromosome 2 that acts cell autonomously in the notochord and leads to its disintegration, and thus causes severe defects in somite patterning and vertebral column development. The molecular nature of the Sd gene and mutation is unknown, and it is unclear whether Sd is a loss-of-function mutation and the semidominant inheritance of the Sd phenotype is due to haploinsufficiency, or whether Sd represents a gain-of-function mutation in a gene essential for notochord development and maintenance. Here, we report on the genetic interaction between Sd and an insertional mutation called Etl4^lacZ, which provides genetic evidence that Sd is a gain-of-function mutation. Etl4^lacZ is an enhancer trap insertion, which gives rise to lacZ expression in distinct cell types, including the notochord. In homozygosity, the lacZ insertion leads to abnormal vertebrae in the caudal part of the vertebral column. Etl4^lacZ maps approximately 0.75 cM distal to Sd, and in double heterozygotes modifies the Sdphenotype contrarily, depending on the chromosomal configuration of the Sd and Etl4^lacZ mutations: when Etl4^lacZ is present on the chromosome wild type for Sd (Sd +/+ Etl4^lacZ; trans configuration), the Sd phenotype is enhanced, i.e., vertebral malformations extend to more anterior positions and the vertebral body of the axis is further reduced. Conversely, when Etl4^lacZ is present on the same chromosome as Sd (Sd Etl4^lacZ /+ +; cis configuration), the Sd phenotype is attenuated, i.e., vertebral malformations are confined to more posterior levels, and the dens axis, which is severely reduced or absent in Sd heterozygotes, is restored. The different effect of the Etl4^lacZ insertion on Sd, depending on its presence in trans or cis, suggests a direct interaction of the transgene insertion with the Sd gene. Additionally, the attenuation of the Sd phenotype by Etl4^lacZ in cis suggests that Sd is a gain-of-function mutation and lends support to the idea that Etl4^lacZ is a new allele of Sd. Dev. Genet. 23:86–96, 1998. © 1998 Wiley-Liss, Inc.     

Evaluation of the Variation in Calculated Human Exposure to Soil Contaminants Using Seven Different European Models

Calculations using seven European exposure models were performed for 20 different exposure scenarios. The objective of this article is to understand the variation in the resulting calculated human exposures due to soil contamination. To this purpose, the variation in calculated exposures has been compared with the variation in calculated concentrations in contact media and in the soil compartments and with the variation in the input parameters. This led to the conclusion that most of the variation in Exposure through soil ingestion is explained by differences in the input parameter average daily soil intake. When model-specific input parameters are used the variation in Exposure through crop consumption is explained by differences in the product of total consumption rate and fraction of total consumption rate that is home-grown. When standardized input parameters are used, this variation is comparable with the variation in Concentration in root vegetables and in Concentration in leafy vegetables. The variation in Exposure through indoor air inhalation is comparable with the variation in Concentration in indoor air. This suggests that the parameters that control the variation in Concentration in the indoor air, that is, surface and volume of the building and, to a lesser extent, ventilation frequency of the building, also control the variation in Exposure through indoor air inhalation.     

Locus determining the human sperm-specific lactate dehydrogenase,LDHC, is syntenic with LDHC

From the data presented in this report, the human LDHC gene locus is assigned to chromosome 11. Three genes determine lactate dehydrogenase (LDH) in man. LDHA and LDHB are expressed in most somatic tissues, while expression of LDHC is confined to the germinal epithelium of the testes. A human LDHC cDNA clone was used as a probe to analyze genomic DNA from rodent/human somatic cell hybrids. The pattern of bands with LDHC hybridization is easily distinguished from the pattern detected by LDHA hybridization, and the LDHC probe is specific for testis mRNA. The structural gene LDHA has been previously assigned to human chromosome 11, while LDHB maps to chromosome 12. Studies of pigeon LDH have shown tight linkage between LDHB and LDHC leading to the expectation that these genes would be syntenic in man. However, the data presented in this paper show conclusively that LDHC is syntenic with LDHA on human chromosome 11. The terminology for LDH genes LDHA, LDHB, and LDHC is equivalent to Ldhl, Ldh2, and Ldh3, respectively.     

Some generic concepts in Compositae – Gnaphaliinae

The species of Gnaphalium, Helichrysum and related genera in southern Africa have been surveyed and a number of groups of allied species detected in which the ratio of female to hermaphrodite flowers ranges from a majority of female to a majority of hermaphrodite and in some groups there are even homogamous species. Thus, the failure of the old sex-ratio character used to separate Gnaphalium and Helichrysum is confirmed. The validity of these groupings has been tested by studying detailed characters such as the structure of the stereome (whether undivided or fenestrated) and the type of achenial hair, as well as the more usual floral characters. Most of these plants have leaves with flat or revolute margins and the occasional occurrence of involute margins is taxonomically important. Gnaphalium L. (type G. uliginosum L.) has been redefined to include Amphidoxa DC. and Demidium DC. (female flowers epappose) and species with more hermaphrodite flowers then female. The stereome is undivided. Helichrysum remains a massive and highly diverse genus and includes Leontonyx Cass. The stereome is normally fenestrated and the receptacle epaleate. One or two species have paleae, but Rhynea with receptacle paleate and stereome undivided is maintained. A small group of species with undivided stereomes, centred on H. marifolium D.C., has had to be retained in Helichrysum because of the existence of linking species. Undivided stereome and subglobose achenial hairs enjoin the transfer of H. vestitum (L.) Willd. and two allies, as well as the group of species centred on H. paniculatum (Thunb.) Thunb., to Helipterum, despite the lack of plumose pappus. Edmondia Cass. (H. sesamoides (L.) Willd.) with distinctive habit, involute leaves and no close relatives in Helichrysum is reinstated. Pseudognaphalium Kirp., to which only P. oxyphyllum (DC.) Kirp. had previously been assigned, is extended to include, in its typical subgenus, Hypelichrysum Kirp. and a number of American species of Gnaphalium, as well as the African G. undulatum L. and G. oligandrum (DC.) Hilliard & Burtt, and the Asiatic G. hypoleucum DC. and G. chrysocephalum Franch. A new subgenus, Laphangium, is created to accommodate G. luteo-album L. and its allies. Achyrocline (Less.) DC. has been maintained, as is done in South America, and some African species placed under Helichrysum by Moesert 1910) are returned to it. Two new genera are recognized among gnaphalioid plants with undivided stereomes: Troglophyton (based on G. capillaceum Thunb.) with about seven species and Plecostachys (based on G. serpyllifolium Berg, and including G. polifolium Thunb.). Both genera straddle the old numerical boundary between Gnaphalium and Helichrysum. The monotypic Helichrysopsis Kirp. is maintained. Plants of gnaphalioid aspect with fenestrated stereomes necessitate a further new genus: Vellereophyton (type G. dealbatum Thunb., better known as G. candidissimum Lam.) with seven species. Eriosphaera Less, and Lasiopogon Cass, are redefined and enlarged to include species previously placed in Gnaphalium. Metalasia and Lachnospermum are redefined, with the transfer of the only large-headed species remaining in Metalasia to Lachnospermum. Two new genera are created for plants in this affinity previously misplaced in Helichrysum. Atrichantha is based on H. gemmiferum Bol. and one new species is described. Dolichothrix is established for the anomalous H. ericoides (Lam.) Pers. Ifloga is briefly investigated and it is shown that the distinction between sect. Ifloga and sect. Eutrichogyne Bentham must be based on characters of the capitulum, not just on annual versus subshrubby habit. Lasiopogon molluginoides DC. (=Comptonanthus Nordenstam) is transferred to Ifloga and the structure of the capitulum in the genus is discussed. Some earlier work on this group of plants is briefly summarized, the phytogeographical interest of the proposed arrangement is discussed and some general conclusions offered.     

The distribution of calanoid copepods in the plankton of Wisconsin Lakes

Zooplankton communities from 499 lakes were examined for calanoid copepod species. Limnocalanus macrurus and Senecella calaloides are confined to Lakes Michigan, Superior and one inland lake each. Eurytemora affinis has recently become established in the coastal waters of Lakes Michigan and Superior. Epischura lacustris is present in the summer plankton of a wide variety of lake types. Aglaodiaptomus leptopus is sensitive to fish predation and confined to small lakes without fish. Leptodiaptomus ashlandi is restricted to Lakes Michigan and Superior, but L. sicilis is also found in some inland lakes. Leptodiaptomus minutus is a boreal species found mostly in lakes of the far north. Skistodiaptomus oregonensis is the most commonly occurring calanoid and seems well adapted to lakes of the meso-to low eutrophic types. Skistodiaptomus pallidus is also generally distributed throughout the state, but less common than oregonensis and adapted to more eutrophic lakes. Leptodiaptomus siciloides and A. clavipes are western species, adapted to eutrophic lakes, which are expanding their ranges eastward, aided by cultural eutrophication.     

Resurrection of an ancestral gene: functional and evolutionary analyses of the Ng<Emphasis Type="Italic">rol</Emphasis> genes transferred from<Emphasis Type="Italic"> Agrobacterium</Emphasis> to<Emphasis Type="Italic"> Nicotiana</Emphasis>

The Ngrol genes, which have high similarity in sequence to the rol genes of Agrobacterium rhizogenes, are present in the genome of untransformed plants of Nicotiana glauca. It is thought that bacterial infection resulted in the transfer of the Ngrol genes to plants early in the evolution of the genus Nicotiana, since several species in this genus contain rol-like sequences but others do not. Plants transformed with the bacterial rol genes exhibit various developmental and morphological changes. The presence of rol-like sequences in plant genomes is therefore thought to have contributed to the evolution of Nicotiana species. This paper focuses on studies of the Ngrol genes in present-day plants and during the evolution of the genus Nicotiana. The functional sequences of several Ngrol genes may have been conserved after their ancient introduction from a bacterium to the plant. Resurrection of an ancestral function of one of the Ngrol genes, as examined by physiological and evolutionary analyses, is also described. The origin of the Ngrol genes is then considered, based on results of molecular phylogenetic analyses. The effects of the horizontal transfer of the Ngrol genes and mutations in the genes are discussed on the plants of the genus Nicotiana during evolution.Seishiro Aoki is the recipient of the Botanical Society Award for Young Scientist, 2002.