Breeding waterbirds in relation to artificial pond attributes: implications for the design of irrigation facilities

The growth of inter-basin water transfers and the development of new irrigation facilities in southeastern Spain are responsible for a variety of ecological impacts. In spite of this, the construction of artificial ponds to keep water for intensive agriculture may also provide new habitats for breeding waterbirds. We counted waterbirds during the breeding season in artificial ponds that had been built up using different materials and measured their abiotic and biotic attributes. We found that ponds were used as breeding and foraging habitat by 22 different waterbird species and breeding numbers of a few of them seemed to be larger in these artificial facilities than in nearby natural and semi-natural wetlands. Abundance and richness of breeding waterbirds was influenced by construction materials. Ponds constructed with low density polyethylene and covered with sand and stones held more species and their numbers were higher than those constructed with other plastic materials. The presence of emergent and submerged vegetation as well as abiotic attributes, such as pond size, accounted for most of the deviance when modelling richness and species abundance.     

Seed dispersal by waterbirds in southern Africa: comparing the roles of ectozoochory and endozoochory

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Sub-sampling data from the North American Breeding Bird Survey for application to the Bird Community Index,an indicator of ecological condition

We examined the use of data from the North American Breeding Bird Survey (BBS) for assessments of ecological condition using an avian community-based indicator, the Bird Community Index (BCI). In previous research, the BCI was developed and applied to a random sample of sites in the Mid-Atlantic Highlands. The goal of providing national scale assessments with bird community indicators hinges on a demonstration that existing monitoring programs, like the BBS, can be tapped as source data for the indicators. Our goal was to compare a BBS-based assessment of the Mid-Atlantic Highlands to our original assessment based on random sampling locations. We subsampled three iterations of BBS route data from the study area to account for spatial and temporal scale differences between 40 km BBS routes and the original 1 km transects sampled to develop the BCI. All three iterations of BBS subsamples provided lower overall assessments of ecological condition for the Mid-Atlantic Highlands relative to our original research. Land cover analysis, however, revealed that BBS routes sampled land cover types in proportion to their actual prevalence in the region. Thus, we conclude that BBS data are appropriate as source data for broad scale ecological assessments with indicators such as the BCI. For numerous analytical and logistical reasons, we recommend 10-stop subsamples of BBS data as the preferred scale at which to apply bird community indicators of ecological condition.     

Identifying new buffer areas for conserving waterbirds in the Mediterranean basin: the importance of the rice fields in Extremadura,Spain

The impact of wetland loss on migratory waterbirds can be mitigated by the presence of anthropogenic habitats such as rice fields. In the Mediterranean basin, wetlands have been drained and altered to such a degree that their very existence is threatened. It is, therefore, essential to identify key buffer areas in the basin to develop conservation strategies for migratory waterbirds. In Extremadura, continental SW Spain, 30,000 ha of new rice fields have created since the 1960s. The present study describes for the first time the waterbird community associated with these inland rice fields, and addresses the question of the potential value of this area in buffering the loss of natural wetlands for populations of waterbirds using the East Atlantic Flyway (EAF). The waterbird community studied consisted of 45 species, with population levels reaching values of international importance (>1% of the biogeographical population using EAF) for the Common Crane Grus grus (19%), Black-tailed Godwit Limosa limosa (1.2%), Black-winged Stilt Himantopus himantopus (1.2%), and Cattle Egret Bubulcus ibis (1%). The presence of these rice fields may be modifying the wintering and/or feeding sites of some waterbird species such as the Common Crane and Black-tailed Godwit. Unfortunately, there is no legal protection for this area. We propose the designation of these rice fields as a Special Protection Area for birds.     

Bird sensitivity to disturbance as an indicator of forest patch conditions: An issue in environmental assessments

An Environmental Assessment (EA) is one of the steps within the Environmental Impact Assessment process. Birds are often used in EA to help decision makers evaluate potential human impacts from proposed development activities. A “sensitivity to human disturbance” index, created by Parker III et al. (1996) for all Neotropical species, is commonly considered an ecological indicator. However, this parameter was created subjectively and, for most species, there have been no rigorous field test to validate its effectiveness as such. Therefore, in this study, we aim to: (1) evaluate if, at the local scale, birds from forest patches in a human-modified landscape (HML) may differ in sensitivity from Parker's sensitivity classification; (2) evaluate the effectiveness of the species richness value at each sensitivity level as an ecological indicator; (3) gather information on how often and in which manner Parker's classification has been used in EA. To do so, bird sampling was performed in eight forest patches in a HML over one year. Then, we created a local sensitivity to disturbance using information about threat, endemism, spatial distribution and relative abundance of all species in the study area. We found that 37% of the forest birds showed different local sensitivity levels when compared with Parker's classification. Our results show that only the richness of high-sensitivity species from our local classification fitted the ecological indicator assumptions helping the environmental conditions evaluation of the studied patches. We conclude that species richness of each Parker's bird sensitivity levels do not necessarily perform as an ecological indicator at the local scale, and particularly in HML. Nevertheless, Parker's Neotropical bird sensitivity classification was used in 50% of EA we reviewed. In these, 76% assumed that it was an accurate ecological indicator of the local forest conditions for birds. The lack of clear criteria used in Parker's classification allows diverse interpretations by ornithologists, and there is no agreement about the ecological meaning of each sensitivity level and what environmental conditions each level may indicate of. Therefore, the use of Parker's classification in EA may jeopardize accurate interpretations of proposed anthropogenic impacts. Furthermore, because a bird species’ sensitivity often varies between locations, we argue that Parker's generalized classification of bird sensitivity should not be used as an indicator of forest environmental conditions in EA throughout HMLs in Neotropics. Rather, local bird ecological indices should be explored, otherwise, erroneous predictions of the anthropogenic impacts will continue to be common.     

Falcon genomics in the context of conservation,speciation, and human culture

Here, we review the diversity, evolutionary history, and genomics of falcons in the context of their conservation and interactions with humans, and provide a perspective on how new genomic approaches may be applied to expand our knowledge of these topics. For millennia, humans and falcons (genus Falco) have developed unique relationships through falconry, religious rituals, conservation efforts, and human lifestyle transitions. From an evolutionary perspective, falcons remain an enigma. Having experienced several recent radiations, they have reached an unparalleled and almost global distribution, with an intrageneric species richness that is roughly an order of magnitude higher than typical within their family (Falconidae) and across other birds (Phylum: Aves). This diversity has evolved in the context of unusual genomic architecture that includes unique chromosomal rearrangements, relatively low chromosome counts, extremely low microdeletion rates, and high levels of nuclear mitochondrial DNA segments (NUMTs). These genomic peculiarities combine with high levels of ecological and organismal diversity and a legacy of human interactions to make falcons obvious candidates for evolutionary studies, providing unique research opportunities in common topics, including chromosomal evolution, the mechanics of speciation, local adaptation, domestication, and urban adaptation.     

Preferences for symmetry in human faces in two cultures: data from the UK and the Hadza, an isolated group of hunter-gatherers

Many studies show agreement within and between cultures for general judgements of facial attractiveness. Few studies, however, have examined the attractiveness of specific traits and few have examined preferences in hunter-gatherers. The current study examined preferences for symmetry in both the UK and the Hadza, a hunter-gatherer society of Tanzania. We found that symmetry was more attractive than asymmetry across both the cultures and was more strongly preferred by the Hadza than in the UK. The different ecological conditions may play a role in generating this difference. Such variation in preference may be adaptive if it reflects adaptation to local conditions. Symmetry is thought to indicate genetic quality, which may be more important among the Hadza with much higher mortality rates from birth onwards. Hadza men who were more often named as good hunters placed a greater value on symmetry in female faces. These results suggest that high quality Hadza men are more discriminating in their choice of faces. Hadza women had increased preferences for symmetry in men's faces when they were pregnant or nursing, perhaps due to their increased discrimination and sensitivity to foods and disease harmful to a foetus or nursing infant. These results imply that symmetry is an evolutionarily relevant trait and that variation in symmetry preference appears strategic both between cultures and within individuals of a single culture.     

The 99mTc-HMPAO leukocyte scan: an alternative to radiology and endoscopy in evaluating the extent and the activity of inflammatory bowel disease

Seventy-eight patients, 47 with Crohn's disease and 31 with ulcerative colitis, were studied using 99mTc-HMPAO-labelled leukocytes, in order to assess the reliability of the scan in evaluating the location and activity of the disease. The granulocyte integrity was assessed by evaluating the lung wash-out and the early liver and spleen uptake using a 20 minute initial dynamic study. The results of the leukocyte scan revealed a high correlation with radiological and endoscopic findings in the diagnosis of the inflamed bowel segments. The disease activity correlated well with uptake in the bowel, graded from 0 to 3. The leukocyte scan exactly documented the activity in the 9 cases of Crohn's disease located in the ileum and in 5 cases in which the endoscopic exploration was hampered by scarring. Four fistulae were correctly visualized. Moreover, the change in activity after therapy in 6 patients was documented. This technique provides images of excellent quality, superior to those obtainable with indium-111.     

Leaf meristems: an easily ignored component of the response to human disturbance in alpine grasslands

Grazing and fencing are two important factors that influence productivity and biomass allocation in alpine grasslands. The relationship between root (R) and shoot (S) biomass and the root:shoot ratio (R/S) are critical parameters for estimating the terrestrial carbon stocks and biomass allocation mechanism responses to human activities. Previous studies have often used the belowground:aboveground biomass ratio (M_b/M_a) to replace the R/S in alpine ecosystems. However, these studies may have neglected the leaf meristem biomass, which belongs to the shoot but occurs below the soil surface, leading to a significant overestimation of the R/S ratio. We conducted a comparative study to explore the differences between the R/S and M_b/M_a at both the species (Stipa purpurea, Carex moorcroftii, and Artemisia nanschanica) and community levels on a Tibetan alpine grassland with grazing and fencing management blocks. The results revealed that the use of the M_b/M_a to express the R/S appeared to overestimate the actual value of the R/S, both at species and community levels. For S. purpurea, the M_b/M_a was three times higher than the R/S. The M_b/M_a was approximately two times higher than the R/S for the species of C. moorcroftii and A. nanschanica and at the community level. The relationships between the R‐S and M_b‐M_a exhibited different slopes for the alpine plants across all the management practices. Compared to the fenced grasslands, the plants in the grazing blocks not only allocated more biomass to the roots but also to the leaf meristems. The present study highlights the contribution of leaf meristems to the accurate assessment of shoot and belowground biomasses. The R/S and M_b/M_a should be cautiously used in combination in the future research. The understanding of the distinction between the R‐S and M_b‐M_a may help to improve the biomass allocation mechanism response to human disturbances in an alpine area.     

Mid- to late-Holocene vegetation history of Greater Exmoor,UK: estimating the spatial extent of human-induced vegetation change

This paper presents the results from three pollen profiles from a group of small spring mire sites on the southern edge of Exmoor in south west England. The size and topography of these sites allow detailed local landscape histories around each site to be reconstructed which broadly cover the mid- to late-Holocene. Comparison of the individual local landscape histories demonstrates the scale of spatial variation in vegetation around the upland edge, and facilitates understanding of human-landscape interactions from the early Neolithic onward. In the early Neolithic significant short-term woodland disturbance is recorded around the upland fringe, including clearance of oak-hazel-elm woodland, suggesting that the shift from Mesolithic to Neolithic is not marked by a gradual environmental transition. Following this, there is clear evidence of Neolithic management of upland heath using fire, presumably for the management of upland grazing. Woodland clearances are recorded throughout the later Prehistoric period; however, the use of multiple profiling suggests that woodland clearance is spatially discrete, even within an area of 4 km². Pastoral land use is dominant around the uplands until around 900–1,000 a.d., and there is no discernible Roman or post-Roman period impact in the vegetation, suggesting cultural stability from the late Iron Age to the early Medieval period. By 1,100 a.d., there is a shift to mixed arable-pastoral farming which appears to continue well into the post-Medieval period.     

Macroinvertebrate indicators of lake acidification: analysis of monitoring data from UK, Norway and Sweden

Although the acid sensitivity of many invertebrate species in lakes is well known, methods for assessment of lake acidification based on macroinvertebrate samples are less developed than for rivers. This article analyses a number of existing metrics developed for assessment of river acidification, and evaluates their performance for assessment of lake acidification. Moreover, new species-based indicators of lake acidification were developed and tested. The selected dataset contains 668 samples on littoral macroinvertebrates from 427 lakes with almost 60% of the samples from Sweden and the rest from UK and Norway. Flexible, non-parametric regression models were used for explorative analyses of the pressure–response relationships. The metrics have been assessed according to their response to pH, the degree of non-linearity of the response and the influence of humic compounds. Acid-sensitive metrics often showed a threshold in response to pH between 5.8 and 6.5. Highly acid-tolerant metrics were typically dominant across the whole pH range. Humic level had a positive effect for most acid-sensitive metrics. Generally, most metrics showed a more non-linear response pattern for the humic lakes than for clear lakes. The significant relationship between these macroinvertebrate metrics and acidification shows that there is a potential for developing further the assessment systems for ecological quality of lakes based on these metrics, although the metrics explained a low % of the variation (<30%). In order to improve the predictive power of the biotic metrics across the acidified part of Europe, further harmonization and standardisation of sampling effort and taxa identification are needed.     

Reduction, classification and ranking of motion analysis data: an application to osteoarthritic and normal knee function data

There are certain major obstacles to using motion analysis as an aid to clinical decision making. These include: the difficulty in comprehending large amounts of both corroborating and conflicting information; the subjectivity of data interpretation; the need for visualization; and the quantitative comparison of temporal waveform data. This paper seeks to overcome these obstacles by applying a hybrid approach to the analysis of motion analysis data using principal component analysis (PCA), the Dempster-Shafer (DS) theory of evidence and simplex plots. Specifically, the approach is used to characterise the differences between osteoarthritic (OA) and normal (NL) knee function data and to produce a hierarchy of those variables that are most discriminatory in the classification process. Comparisons of the results obtained with the hybrid approach are made with results from artificial neural network analyses.     

Pattern-analytic approach to analysis of accidents due to human error: an application of the ortho-oblique-type binary data decomposition.

An ortho-oblique-type binary data decomposition based on data matrices providing relevant conditions of accidents is proposed as a means of classifying patterns of human error, and the computing procedures are described. The usefulness of the technique is shown by a numerical example of accidents in freight-car classification yard work. Forty-two severely injured victims were interviewed by psychologists and the contents of case reports were rearranged into a reliable binary data matrix which indicated the presence or absence of an interrelationship between each sample and each of 42 items of operational, environmental, and psychological conditions. Three patterns of error leading to an accident were identified by interpreting the orthogonally rotated results. They were 1) failure of strenuous performance in relation to fatigue and poor communication, 2) veterans' mistakes in teamwork, possibly due to hasty operation or distractions, and 3) errors caused by certain defects of machines or inappropriate work space. Recommendations were thus made on training plans for beginners. The importance of using non-scaled accidental data in binary form and allowing rotation for data decomposition is discussed.     

Multivariate analysis of plant communities in the Narok district, Kenya: The influence of environmental factors and human disturbance

Species type in 42 samples was examined using ordination analysis to establish whether the vegetation pattern displays gradation due to environmental factors, and whether the pattern was being altered by human disturbance. The analysis displayed two patterns. First, the ordination on axis 1 demonstrated vegetation gradation from xeric communities on the plains to humid forests on the highland. This pattern is explained on the basis of moisture and nutrient variations. Vegetation vectors based on species presence-absence were correlated with average rainfall, carbon, nitrogen and zinc.The second was separation of disturbed and undisturbed forest and bushland site categories on axis 2 of the ordination space. This pattern suggests that disturbance response is interactive with moisture so that only in moist communities does a significant vegetation response to disturbance occur.     

New data on the history of the plateau forest of Okomu, southern Nigeria: an insight into how human disturbance has shaped the African rain forest

The classic 1955 and 1956 papers by Eustace Jones describe vegetation pattern, process and history in Okomu Forest, south-western Nigeria. Jones and colleagues were puzzled to find an extensive layer of charcoal and pottery below mature mahogany forests. Based on an extensive review of historical documents and the estimated ages of dying emergent tree species, Jones suggested that the forest in Okomu had regenerated after a human population decline 200–300 years previously. We made radiocarbon measurements on samples from the layer of charcoal and pottery described by Jones. In addition, we obtained δ¹³C measures from a soil profile cutting through the charcoal layer. The charcoal dates to about 700–750 years BP whilst the δ¹³C profile showed no evidence of input of organic matter from C₄ grasses. These results are discussed in the light of other recent archaeological evidence of the impact of humans on the rain forests of Africa during the last 2000–3000 years. It seems that extensive archaeological remains are hidden beneath much of the African rain forest, suggesting that human disturbance has been one of the dominant factors affecting forest structure and composition in recent millennia.     

Collagen degradation in human lung fibroblasts: extent of degradation, role of lysosomal proteases, and evaluation of an alternate hypothesis

Experiments were conducted to determine the extent and variability of collagen degradation in human fetal lung fibroblasts. Cells were incubated with [14C]proline, and degradation was measured by determining the hydroxy[14C]proline in a low molecular weight fraction relative to total hydroxy[14C]proline. Average (basal) degradation in stationary phase HFL-1 cells incubated for 8 h was 16 +/- 3%, and substantial alterations in the composition of the labeling medium, e.g., omitting serum and varying pH between 6.8 and 7.8, had no effect. Organic buffers slightly lowered degradation in a manner that was independent of pH. Collagen degradation in two other lung cell lines, Wl-38 and lMR-90, did not differ from the level in HFL-1. Degradation was significantly higher (23 +/- 5%) in HFL-1 cultures labeled for 24 h rather than 8 h, and pulse-washout experiments showed that the rate of degradation was not uniform: after an 8-h pulse, 11% of the hydroxy [14C]proline in the medium was in the low molecular weight fraction, but 31% was in this fraction after a 16-h washout. The lack of effect of either serum deprivation or elevated pH suggests that lysosomal proteases have no direct role in basal degradation; however, NH4Cl decreased the enhanced degradation observed in ascorbate deficiency to basal level, indicating that abnormal molecules synthesized under those conditions are degraded by lysosomal proteases. The appearance of small hydroxy[14C]proline-containing molecules was inhibited by alpha alpha'dipyridyl and cycloheximide in a dose-dependent and reversible manner, demonstrating that their production depends on enzymatic hydroxylation of proline and protein synthesis.     

Population changes of some bird species in Scottish and Welsh Atlantic Oakwoods between the 1980s and 2003/4 using data from the repeat Woodland Bird Survey

Summary

Atlantic Oakwoods support a unique breeding avifaunal community, characterised by redstarts, wood warblers, pied flycatchers and tree pipits. We have used a sample of data from the national Repeat Woodland Bird Survey to examine population changes in these four species within Atlantic Oakwoods over the last two decades. We used data from 29 woods in Argyll in western Scotland surveyed in 1985, and from 27 woods in Gwynedd in northwest Wales surveyed in 1983 and compare them with data from repeat surveys carried out in 2003 and 2004. In this paper, we report the population changes for these species between these two periods and examine whether changes differed between Scottish and Welsh sites.