Viability Analysis of Fisheries Management on Hermaphrodite Population

We study the viability domains of bio-economic constraints for fishing model of hermaphrodite population, displaying three stages, juvenile, female and male. The dynamic of this model is subject to two constraints: an ecological constraint ensuring the stock perennity, and an economic constraint ensuring a minimum revenue for fishermen. Using viability kernel, we find out a viability domain which simultaneously guarantees a minimum stock level and a minimum income for fleets.     

Fisheries exploitation pattern of narrow-barred Spanish mackerel, Scomberomorus commerson, in Oman and potential management options

A data base including length frequency distributions and catches of the Scomberomorus commerson in Oman according to fleet (gear/technique) and region has been established to carry out length cohort analyses, determine yield per recruit and simulate changes in fishing effort and/or increase in minimum length limit in catches. The analyse of data showed that: (i) The average fishing mortality rate is moderate (0.5–0.6), but acts in part on the juvenile fraction of the stock. The exploitation pattern differs, however, among fleets with some fleet components targeting largely immature kingfish and others largely the adult stock. (ii) An increase in total fishing effort would lead to long‐term losses in total catch; the losses would be highest for fleets that target the larger specimens. A reduction of the effort would, in the long term, lead to an increase in yield and spawning stock biomass. (iii) An increase of minimum length limit in catches would, in the long term, lead to a substantial increase in yield and spawning stock biomass; the gain in catch would be largest for fleet components that target the adult fraction of the stock and (iv) an increase in minimum length limit in catches combined with an increased selectivity of the fisheries (i.e. favorising fleets targeting the adult fraction of the stock) would lead to the highest gain in sustainable catch. In this case, the sustainable catch could be increased by more than 50%. Therefore, this option represents the optimal management strategy obtained in the present study.     

The Dynamics of a Fish Stock Exploited in Two Fishing Zones

This work presents a specific stock-effort dynamical model. The stocks correspond to two populations of fish moving and growing between two fishery zones. They are harvested by two different fleets. The effort represents the number of fishing boats of the two fleets that operate in the two fishing zones. The bioeconomical model is a set of four ODE's governing the fishing efforts and the stocks in the two fishing areas. Furthermore, the migration of the fish between the two patches is assumed to be faster than the growth of the harvested stock. The displacement of the fleets is also faster than the variation in the number of fishing boats resulting from the investment of the fishing income. So, there are two time scales: a fast one corresponding to the migration between the two patches, and a slow time scale corresponding to growth. We use aggregation methods that allow us to reduce the dimension of the model and to obtain an aggregated model for the total fishing effort and fish stock of the two fishing zones. The mathematical analysis of the model is shown. Under some conditions, we obtain a stable equilibrium, which is a desired situation, as it leads to a sustainable harvesting equilibrium, keeping the stock at exploitable densities.     

Population dynamics and stock assessment for Octopus maya (Cephalopoda: Octopodidae) fishery in the Campeche Bank, Gulf of Mexico

The octopus (Octopus maya) is one of the most important fish resources in the Mexican Gulf of Mexico with a mean annual yield of 9000 ton, and a reasonable number of jobs created; O. maya represents 80% of the total octopus catch, followed by Octopus vulgaris. There are two artisanal fleets based on Octopus maya and a middle-size fleet that covers both species. Catch-at-length structured data from the artisanal fleets, for the 1994 season (August 1st to December 15th) were used to analyze the O. maya population dynamics and stock and to estimate the current level of exploitation. Von Bertalanffy growth parameters were: L infinity = 252 mm, mantle length; K = 1.4 year-1; oscillation parameters C = 1.0, WP = 0.6; and tz = 0.842 years. A rough estimate of natural mortality was M = 2.2, total mortality from catch curve Z = 8.77, and exploitation rate F/Z = 0.75. This last value suggests an intensive exploitation, even when yield per recruit analysis indicates both fleets may increase the minimum legal size on about 10% to increase yields. The length-based VPA also shows that the stock is being exploited under its maximum acceptable biological limit. These apparently contradictory results are explained by biological and behavioral characteristics of this species. Because most females die after reproduction, a new gross estimation of natural mortality was computed as M = 3.3. The new estimate of exploitation rate was F/Z = 0.57. This new value coincides with results from the length-VPA and the Thompson and Bell methods, the former suggesting that a reduction of 20% in fishing mortality may provide larger yields. This fishery resource is fully exploited and current management measures must be revised to sustain and probably optimize yields.     

Interannual Variability of Fisheries Economic Returns and Energy Ratios Is Mostly Explained by Gear Type

According to portfolio theory applied to fisheries management, economic returns are stabilised by harvesting in a portfolio stocks of species whose returns are negatively correlated and for which the portfolio economic return variance is smaller than the sum of stock specific return variances. Also, variability is expected to decrease with portfolio width. Using a range of indicators, these predictions were tested for the French fishing fleets in the Bay of Biscay (Northeast Atlantic) during the period 2001–2009. For this, vessels were grouped into eight fishing fleets based on the gears used and exploited species were grouped into five functional groups. The portfolio width of fleets ranged from 1–3 functional groups, or 4–19 species. Economic fleet returns (sale revenues minus fishing costs) varied strongly between years; the interannual variability was independent of portfolio width (species or functional groups). Energy ratio expressed by the ratio between fuel energy used for fishing and energy contained in landings varied from 0.3 for purse seines to 9.7 for trawlers using bottom trawls alone or in combination with pelagic trawls independent of portfolio width. Interannual variability in total sale revenues was larger than the sum of species specific sales revenue variability, except for fleets using hooks and pelagic trawlers; it increased with the number of species exploited. In conclusion, the interannual variability of economic returns or energy ratios of French fisheries in the Bay of Biscay did not decrease with the number of species or functional groups exploited, though it varied between fleets.     

Amalgam is a ligand for the transmembrane receptor neurotactin and is required for neurotactin-mediated cell adhesion and axon fasciculation in Drosophila

Neurotactin (NRT), a member of the cholinesterase-homologous protein family, is a heterophilic cell adhesion molecule that is required for proper axon guidance during Drosophila development. In this study, we identify amalgam (AMA), a member of the immunoglobulin superfamily, as a ligand for the NRT receptor. Using transfected Schneider 2 cells and embryonic primary cultures, we demonstrate that AMA is a secreted protein. Furthermore, AMA is necessary for NRT-expressing cells both to aggregate with themselves and to associate with embryonic primary culture cells. Aggregation assays performed with truncated NRT molecules reveal that the integrity of the cholinesterase-like extracellular domain was not required either for AMA binding or for adhesion, with only amino acids 347-482 of the extracellular domain being necessary for both activities. Moreover, the NRT cytoplasmic domain is required for NRT-mediated adhesion, although not for AMA binding. Using an ama-deficient stock, we find that ama function is not essential for viability. Pupae deficient for ama do exhibit defasciculation defects of the ocellar nerves similar to those found in nrt mutants.     

What is multispecies MSY? A worked example from the North Sea

The concept of an optimum yield at intermediate levels of fishing (the so called maximum sustainable yield or MSY) has been with us since the 1930s and is now enshrined in legislation as a key objective of fisheries management. The concept seems intuitively reasonable and is readily applicable to a single stock treated in isolation and assuming a constant environment. However, translating this concept into a mixed and multispecies fishery, where there are complex trade-offs between fleets and stocks and in general no simple optimum solution, has been problematic. Here I introduce a framework for thinking about multispecies MSY in terms of an integrated risk of stock depletion and expected long-term yield. Within this framework I consider the performance of a set of simple harvest control rules based upon a single-limit fishing mortality rate (F) which is common to all stocks and a target biomass which is a set fraction of a stock's virgin biomass. Using a multispecies management strategy evaluation, I compare expected outcomes for a set of these harvest control rules with alternative scenarios, in which each stock has its own F based on the assessment process. I find that the simple framework can produce outcomes that are similar to those from the more sophisticated estimates of F. I therefore conclude that achieving multispecies MSY may depend more upon setting reasonable biomass targets and faithfully applying a harvest control rule approach rather than determining the best possible Fs for each stock.     

Complexity in the spindle checkpoint

Cell viability requires accurate chromosome segregation at mitosis. The spindle checkpoint ensures that anaphase is not attempted until the sister chromatids of each chromosome are attached to spindle microtubules from opposite poles. The checkpoint mechanism involves a signal transduction cascade that is more complex than was originally envisioned.     

Genetics of esterases in Drosophila. VII. Genetic control of the activity level of juvenile hormone (JH)-esterase and heat resistance in D. virilis at high temperatures

The heat-resistant subline 147S was obtained in Drosophila virilis by selecting for viability individuals of heat-sensitive stock 147. It was shown that in the heat-treated 147S pupae the activity of juvenile hormone (JH)-esterase is decreased and, consequently, the titer of juvenile hormone is increased compared with those in the control pupae. These changes are consistent with those observed earlier for resistant stock 101. Heat-resistant stocks 101 and 147S were crossed with heat-sensitive stock 147, whose heat-treated larvae show earlier activation and higher activity of JH-esterase than control larvae. The viability and electrophoretic esterase patterns were analyzed in the F₁ and F₂ hybrids at different temperatures. It was found that the F₁ hybrid is resistant to the effect of high temperature and its activity level of JH-esterase is lower compared with controls. In the F₂ hybrid, there was a 3:1 segregation of viability and a 1:2:1 segregation of the activity level of JH-esterase at high temperatures. It is concluded that the activity level of JH-esterase and heat resistance in D. virilis are monogenically controlled at high temperatures.     

Computation of Operational and Environmental Benchmarks Within Selected Galician Fishing Fleets

Increasing the eco‐efficiency of fishing fleets is currently a major target issue in the seafood sector. This objective has been influenced in recent years by soaring fuel prices, a fact particularly relevant to a sector whose vessels present high energy consumption rates. Efforts to minimize fuel consumption in fishing fleets result in economic benefits and also in important reductions regarding environmental impacts. In this article, we combine life cycle assessment (LCA) and data envelopment analysis (DEA) to jointly discuss the operational and environmental performances of a set of multiple, similar entities. We applied the “five‐step LCA + DEA method” to a wide range of vessels for selected Galician fisheries, including deep‐sea, offshore, and coastal fleets. The environmental consequences of operational inefficiencies were quantified and target performance values benchmarked for inefficient vessels. We assessed the potential environmental performance of target vessels to verify eco‐efficiency criteria (lower input consumption levels, lower environmental impacts). Results revealed the strong dependence of environmental impacts on one major operational input: fuel consumption. The most intensive fuel‐consuming fleets, such as deep sea trawling, were found to entail the diesel consumption levels nearest to the efficiency values. Despite the reduced environmental contributions linked to other operational inputs, such as hull material, antifouling paint, or nets, these may contribute to substantial economic savings when minimized. Finally, given that Galicia is a major fishing region, many of the conclusions and perspectives obtained in this study may be extrapolated to other fishing fleets at the international level.     

Crystal structure at 1.2 A resolution and active site mapping of Escherichia coli peptidyl-tRNA hydrolase.

Peptidyl-tRNA hydrolase activity from Escherichia coli ensures the recycling of peptidyl-tRNAs produced through abortion of translation. This activity, which is essential for cell viability, is carried out by a monomeric protein of 193 residues. The structure of crystalline peptidyl-tRNA hydrolase could be solved at 1.2 A resolution. It indicates a single alpha/beta globular domain built around a twisted mixed beta-sheet, similar to the central core of an aminopeptidase from Aeromonas proteolytica. This similarity allowed the characterization by site-directed mutagenesis of several residues of the active site of peptidyl-tRNA hydrolase. These residues, strictly conserved among the known peptidyl-tRNA hydrolase sequences, delineate a channel which, in the crystal, is occupied by the C-end of a neighbouring peptidyl-tRNA hydrolase molecule. Hence, several main chain atoms of three residues belonging to one peptidyl-tRNA hydrolase polypeptide establish contacts inside the active site of another peptidyl-tRNA hydrolase molecule. Such an interaction is assumed to represent the formation of a complex between the enzyme and one product of the catalysed reaction.     

Putting all the pieces together: integrating current knowledge of the biology,ecology, fisheries status,stock structure and management of yellowfin tuna (<Emphasis Type="Italic">Thunnus albacares</Emphasis>)

Yellowfin tuna (Thunnus albacares; YFT) is an apex marine predator inhabiting tropical and sub-tropical pelagic waters. It supports the second largest tuna fishery in the world. Here, we review the available literature on YFT to provide a detailed overview of the current knowledge of its biology, ecology, fisheries status, stock structure and management, at global scale. YFT are characterized by several peculiar anatomical and physiological traits that allow them to survive in the oligotrophic waters of the pelagic realm. They are opportunistic feeders, which allows fast growth and high reproductive outputs. Globally, YFT fisheries have expanded over the last century, progressively moving from coastal areas into the majority of sub-tropical and tropical waters. This expansion has led to a rapid increase in global commercial landings, which are predominantly harvested by industrial longline and purse seine fleets. For management purposes, YFT is divided into four stocks, each of which is currently managed by a separate tuna Regional Fisheries Management Organization. Our current understanding of YFT stock structure is, however, still uncertain, with conflicting evidence arising from genetic and tagging studies. There is, moreover, little information about their complex life-history traits or the interactions of YFT populations with spatio-temporally variable oceanographic conditions currently considered in stock assessments. What information is available, is often conflicting at the global scale. Finally, we suggest future research directions to manage this valuable resource with more biological realism and more sustainable procedures.     

Effect of cellulase fractionation on the viability of cultured barley (Hordeum vulgare) protoplasts

The age of the stock plants was important for the barley ( Hordeum vulgare L. cv. Perth) protoplast viability. Light conditions under which the stock plants were grown also affected the viability of the protoplasts. Greenhouse-grown plants yielded much higher number of protoplasts than dark-grown plants, but protoplast viability was better when protoplasts were isolated from etiolated plants. Light supplied during protoplast culture affected protoplast viability within the first 24 h of culture. Cellulase R-10 (Onozuka) was better than Cellulysin (Calbiochem) and Cellulase ⁺ Macerozyme R-10 (Onozuka) for barley mesophyll protoplast isolation. Cellulase R-10 (Onozuka) was fractionated on a G-75 Sephadex column. The eluted fractions were tested for their ability to release barley mesophyll protoplasts and for their toxicity towards the protoplasts. Only a small part of the Cellulase R-10 was necessary for protoplast isolation from barley leaves. When the fractionated cellulase was analysed by isoelectric focusing, this part of the cellolase appeared as a single band.     

Changes in Pollen Viability and Concomitant Increase in the Incidence of Sorghum Ergot with Flowering Date and Implications in Selection for Escape Resistance

Pollen viability and ergot severity were monitored in a line evaluation nursery at Potchefstroom and Bethlehem (South Africa). Percentage grain fill was also evaluated at the latter locality. Changes in pollen viability with flowering date were closely correlated with changes in ergot severity (r = 0.91 and r = 0.81 at Potchefstroom and Bethlehem, respectively). Pollen viability was significantly reduced by pre-flowering daily minimum temperatures < 16°C at both localities during the period 23–27 days before flowering. The concomitant increase in ergot severity closely mirrored changes in pollen viability. Lines differed in their ability to tolerate low pre-flowering minimum temperature. Lines with pollen viabilities > 60% despite pre-flowering minimum temperature <14°C were observed. A number of lines with inherent low pollen viability, despite minimum temperatures >17°C were also found. Avoiding these in favour of vigourous pollen producers may contribute towards enhancing escape resistance in sorghum to ergot.     

Transpositions of mobile dispersed genes in Drosophila melanogaster and fitness of stocks

Summary In situ hybridization with polytene chromosomes was used to demonstrate the transposition of mobile dispersed genes (mdg)-1 and 3 following the selection of flies from low reproductive activity and vability (LA stock) for high reproductive activity, viability and fitness (LA⁺ and HA stocks).The inbred LA stock is continuously selected for low reproductive activity and viability and maintains at least for twentyfive generations a characteristic pattern of mdg-1 distribution in 14–15 sites. Inbred LA⁺ and HA stocks exhibit a changed pattern of mdg-1 locations and the number of sites reaches 21–25. Parallel and independent selection for higher viability may lead to similar characteristic changes in the localization of mdg-1.In several independent experiments we observed, within one generation, a spontaneous and saltatory growth of viability and fitness in the mass-bred LA stock. In these cases new mdg-1 and mdg-3 sites reproducibly appeared to within several bands, some of them characteristic of LA⁺ and HA stocks.We discuss the possible role of mdg in determining the quantitative characters of individuals and their fitness.     

An Evaluation of Rebuilding Policies for U.S. Fisheries

Rebuilding depleted fish populations is a priority of modern fisheries management. In the U.S., strong statutory mandates extend to both the goals and process by which stocks are to be rebuilt. However, the National Standard Guidelines that govern the implementation of the Magnuson-Stevens Fishery Conservation and Management Act may change to increase flexibility in rebuilding requirements. In this study we evaluate performance of the status quo approach to fish stock rebuilding in the United States against 3 alternatives that have been proposed to improve rebuilding outcomes. These alternatives either simplify the analytical requirements of rebuilding analyses or apply ‘best practices’ in fisheries management, thereby avoiding the need for rebuilding analyses altogether. We use a Management Strategy Evaluation framework to evaluate rebuilding options across 6 fish life history types and 5 possible real-world fishery scenarios that include options for stock assessment quality, multiple fleets, and the degree to which the stocks are overfished at the start of the analysis. We show that the status quo rebuilding plan and a harvest control rule that reduces harvest rates at low stock size generally achieve the best rebuilding outcomes across all life-history types and fishery scenarios. Both approaches constrain fishing in the short term, but achieve high catches in the medium and long term as stocks rebuild to productive levels. These results support a growing body of literature that indicates that efforts to end overfishing early pay off in the medium- to long-term with higher cumulative catches than the alternative.     

RNF122诱导细胞凋亡功能依赖于其RING结构域

人类功能基因RNF122能够明显抑制细胞生长,导致细胞凋亡.RNF122含有RING-H2结构域.为了研究RNF122的RING结构域和凋亡的相互关系,构建了RING结构域突变体.MTT和凋亡实验发现,RNF122与细胞存活的密切关系依赖于其RING结构域.进一步的实验提示,RNF122能够负向调节ERK通路,而RING结构域突变型RNF122则能够增强ERK的磷酸化,提示RNF122可能通过ERK通路调节细胞的存活.总之,RING结构域对于RNF122发挥功能起至关重要的作用.     

A global viability assessment of the European eel

The global European eel (Anguilla anguilla) stock is critically endangered according to the IUCN, and the European Commission has urged the development of conservation plans aimed to ensure its viability. However, the complex life cycle of this panmictic species, which reproduces in the open ocean but spends most of its prereproductive life in continental waters (thus embracing a huge geographic range and a variety of habitat types), makes it difficult to assess the long‐term effectiveness of conservation measures. The interplay between local and global stressors raises intriguing cross‐scale conservation challenges that require a comprehensive modelling approach to be addressed. We developed a full life cycle model of the global European eel stock, encompassing both the oceanic and the continental phases of eel's life, and explicitly allowing for spatial heterogeneity in vital rates, availability of suitable habitat and settlement potential via a metapopulation approach. We calibrated the model against a long‐term time series of global European eel catches and used it to hindcast the dynamics of the stock in the past and project it over the 21st century under different management scenarios. Although our analysis relies on a number of inevitable simplifying assumptions and on data that may not embrace the whole range of variation in population dynamics at the small spatiotemporal scale, our hindcast is consistent with the general pattern of decline of the stock over recent decades. The results of our projections suggest that (i) habitat loss played a major role in the European eel decline; (ii) the viability of the global stock is at risk if appropriate protection measures are not implemented; (iii) the recovery of spawner escapement requires that fishing mortality is significantly reduced; and (iv) the recovery of recruitment might not be feasible if reproductive output is not enhanced.     

Short-term preservation of canine preantral follicles: Effects of temperature, medium and time

The use of the large pool of preantral follicles is a promising alternative to provide high numbers of fertilizable oocytes to reproductive biotechnology. This issue is particularly important to canids, since current rates of success of in vitro techniques using oocytes are very limited, and many species within this family are threatened by extinction. The aim of this study was to evaluate effects of temperature, medium and time on morphology and viability of canine preantral follicles during short-term preservation. Canine ovaries were cut into fragments which were incubated in 0.9% NaCl solution or in minimum essential medium (MEM) at 4, 20 or 38 °C for 2, 6, 12 or 24 h. Afterwards, preantral follicles were analyzed by histology, transmission electron microscopy and viability testing using trypan blue, calcein-AM and ethidium homodimer-1. Percentages of morphological normal and viable follicles were maintained similar to control (time 0 h) after incubation in 0.9% NaCl at 4 or 20 °C for up to 6 h and at 38 °C for 2 h. Using MEM, such preservation was possible for 12 h at 4 or 20 °C, and for 6 h at 38 °C. These results indicate that preservation of canine preantral follicles might be better accomplished through hypothermic (4 or 20 °C) storage in MEM, which ensures maintenance of morphology and viability for up to 12 h.