The simple-septate basidiomycetes: a synopsis

The simple-septate basidiomycetes comprise more than 8,000 species that show a high morphological and ecological heterogeneity. To gain insight in the phylogenetic relationships within this group, we compared several ultrastructural features such as septal pore apparatus, form, and behavior of the spindle pole bodies, types of host–parasite interaction, presence or absence of colacosomes, symplechosomes, atractosomes, and cystosomes as well as nuclear rDNA sequences coding for small- and large-subunit rRNA. Based on our integrated analysis, we propose a new classification system for the simple-septate basidiomycetes with the subphylum Pucciniomycotina and the classes Agaricostilbomycetes, Atractiellomycetes, Classiculomycetes, Cryptomycocolacomycetes, Cystobasidiomycetes, Microbotryomycetes, Mixiomycetes, and Pucciniomycetes. We also propose the pucciniomycotinous taxa Cystobasidiales, Erythrobasidiales, Helicobasidiales, Mixiales, Naohideales, Pachnocybales, Spiculogloeales, and Kondoaceae and the new subphyla Agaricomycotina (equivalent to the current Hymenomycetes) and Ustilaginomycotina (equivalent to the current Ustilaginomycetes).     

Unusual metals as carcinogens

A review of the literature on unusual metals as carcinogens was carried out. The metals covered are some of the rare earths, copper, silver, gold, mercury, germanium, tin, antimony, lead, platinum, palladium, aluminum, titanium, niobium, manganese, scandium, yttrium, indium, rhodium, and gallium.     

Neutrino intergalactic communication,metal life,and viruses: Part 1 quo vadis ex machina

At one spectrum extreme, Astrobiology conjectures that for exoplanets with Goldilocks conditions, terrestrial-like life is inevitable. Moreover, it is envisaged that via panspermia, terrestrial-like life and its precursors are transferred among galaxies, stars, and within solar systems via transiting comets, asteroids, and planetoids. In addition, expelled stars, which have solar systems, it is inferred, transfer life as well. However, at the other extreme, we propose a paradigm shift that on some planets, subject to non- Goldilocks conditions, metal machine life could arise, ab initio, and evolve viruses, intelligence, and civilizations, conjointly. Accordingly, intelligent mechanized civilizations could readily and efficiently commence space exploration. Furthermore, as a counter paradigm shift, such civilizations could experiment and produce non-metallic life, based on carbon and other non-metal elements, under suitable conditions, related to Goldilocks life. Even a single example of validated interstellar or intergalactic communication received on the Earth would support the existence of life elsewhere. However, the communication platform should not be restricted to electromagnetic radiation. Other platforms should be included as well - one such example, which would require sophisticated technology, is neutrino communication. This is the case for any advanced civilization, be it metal-machine based, biological-based, and carbon-based. In sum, civilizations based on machine life, would be highly productive due to the longevity and hardiness of machine life. However, significant caveats are raised in this brief report, because possibly dissimilar psychologies and intelligence may lead to conflicts between metal machine life and biological life, inter-paradigm conflict.     

Nicotinic Agonists, Antagonists, and Modulators From Natural Sources

1. Acetylcholine receptors were initially defined as nicotinic or muscarinic, based on selective activation by two natural products, nicotine and muscarine. Several further nicotinic agonists have been discovered from natural sources, including cytisine, anatoxin, ferruginine, anabaseine, epibatidine, and epiquinamide. These have provided lead structures for the design of a wide range of synthetic agents.2. Natural sources have also provided competitive nicotinic antagonists, such as the Erythrina alkaloids, the tubocurarines, and methyllycaconitine. Noncompetitive antagonists, such as the histrionicotoxins, various izidines, decahydroquinolines, spiropyrrolizidine oximes, pseudophrynamines, ibogaine, strychnine, cocaine, and sparteine have come from natural sources. Finally, galanthamine, codeine, and ivermectin represent positive modulators of nicotinic function, derived from natural sources.3. Clearly, research on acetylcholine receptors and functions has been dependent on key natural products and the synthetic agents that they inspired.     

Molecular phylogeny of the gobioid fishes (Teleostei: Perciformes: Gobioidei)

The phylogeny of groups within Gobioidei is examined with molecular sequence data. Gobioidei is a speciose, morphologically diverse group of teleost fishes, most of which are small, benthic, and marine. Efforts to hypothesize relationships among the gobioid groups have been hampered by the prevalence of reductive evolution among goby species; such reduction can make identification of informative morphological characters particularly difficult. Gobies have been variously grouped into two to nine families, several with included subfamilies, but most existing taxonomies are not phylogenetic and few cladistic hypotheses of relationships among goby groups have been advanced. In this study, representatives of eight of the nine gobioid familes (Eleotridae, Odontobutidae, Xenisthmidae, Gobiidae, Kraemeriidae, Schindleriidae, Microdesmidae, and Ptereleotridae), selected to sample broadly from the range of goby diversity, were examined. Complete sequence from the mitochondrial ND1, ND2, and COI genes (3573 bp) was used in a cladistic parsimony analysis to hypothesize relationships among the gobioid groups. A single most parsimonious topology was obtained, with decay indices indicating strong support for most nodes. Major phylogenetic conclusions include that Xenisthmidae is part of Eleotridae, and Eleotridae is paraphyletic with respect to a clade composed of Gobiidae, Microdesmidae, Ptereleotridae, Kraemeriidae, and Schindleriidae. Within this five-family clade, two clades are recovered. One includes Gobionellinae, which is paraphyletic with respect to Kraemeriidae, Sicydiinae, Oxudercinae, and Amblyopinae. The other contains Gobiinae, also paraphyletic, and including Microdesmidae, Ptereleotridae, and Schindleriidae. Previous morphological evidence for goby groupings is discussed; the phylogenetic hypothesis indicates that the morphological reduction observed in many goby species has been derived several times independently.     

Systematics and phylogeny of the caryophyllidia-bearing dorids (Mollusca, Nudibranchia), with descriptions of a new genus and four new species from Indo-Pacific deep waters

The phylogenetic relationships of the caryophyllidia-bearing dorids are studied, based on the examination of the type species of all the genera previously described. The phylogenetic hypothesis supports that the caryophyllidia-bearing dorids are a monophyletic group and the sister group of the clade formed by Astemnotus Ehrenberg, 1831 and Halgerda Bergh, 1880. Several genera previously considered as valid or regarded as uncertain are here synonymized: Peronodoris Bergh, 1904, Trippa Bergh, 1877, Phlegmodoris Bergh, 1878, Petelodoris Bergh, 1881, Kentrodoris Bergh, 1876, Audura Bergh, 1878, Centrodoris P. Fischer, 1883, Anisodoris Bergh, 1898, Awuka Er. Marcus, 1955, Rhabdochiia P. Fischer, 1883, Boreodoris Odhner, 1939, Dictyodoris Bergh, 1880, Gravieria Vayssiere, 1912, Aporodoris Ihering, 1886. The following genera are regarded as valid: Astemnotus, Atagema J.E. Gray, 1850, Jorunna Bergh, 1876, Platydoris Bergh, 1877, Diaulula Bergh, 1878, Rostanga Bergh, 1879, Halgerda Bergh, 1880, Baptodoris Bergh, 1884, Gargamella Bergh, 1894, Alloiodoris Bergh, 1904, Sclerodoris Eliot, 1904, Taringa Er. Marcus, 1955, Thorybopus Bouchet, 1977. The new genus Nophodoris is described based on two new species from New Caledonia deep waters. Two additional new species from New Caledonia belonging to the genera Atagema and Gargamella are also described. Nomenclatural and taxonomic problems are discussed, and several type species, neotypes and lectotypes are selected.     

Oxypred： Prediction and Classification of Oxygen-Binding Proteins

This study describes a method for predicting and classifying oxygen-binding pro- teins. Firstly, support vector machine (SVM) modules were developed using amino acid composition and dipeptide composition for predicting oxygen-binding pro- teins, and achieved maximum accuracy of 85.5% and 87.8%, respectively. Sec- ondly, an SVM module was developed based on amino acid composition, classify- ing the predicted oxygen-binding proteins into six classes with accuracy of 95.8%, 97.5%, 97.5%, 96.9%, 99.4%, and 96.0% for erythrocruorin, hemerythrin, hemo- cyanin, hemoglobin, leghemoglobin, and myoglobin proteins, respectively. Finally, an SVM module was developed using dipeptide composition for classifying the oxygen-binding proteins, and achieved maximum accuracy of 96.1%, 98.7%, 98.7%, 85.6%, 99.6%, and 93.3% for the above six classes, respectively. All modules were trained and tested by five-fold cross validation. Based on the above approach, a web server Oxypred was developed for predicting and classifying oxygen-binding proteins(available from http://www.imtech.res.in/raghava/oxypred/).     

Foliar nutrient levels of broad-leaved tropical trees: A tabular review

Foliar nutrient levels (N, P, S, K, Ca, Mg, Al, Fe, Mn, Zn, Cu, Mo, B), of about 40 tropical and subtropical broad-leaved trees, are listed and classified as deficient, low, intermediate, high, and toxic in each case according to the interpretation and evaluation of the reviewed author(s).     

Distribution of N,P, K,Ca, Mg,S, Zn,Fe, Mn and Cu in groundnut

Summary Concentration of N, P, K, Ca, Mg and S in summer groundnut crop was higher than in kharif while Zn, Fe, Mn and Cu contents were higher in summer crop. Kernel's N, P and Zn; Leaflet's Ca and Mn; Stem's K and Fe; Root's S and Cu and Petiole's Mg contents were highest. Shell's N, P, K, Mg, S, Zn and Cu; Kernel's Ca, Fe and Mn contents were the least. N, P, K, S, Zn and Cu concentrations decreased linearly as the crop grew. Ca, Mg, Fe and Mn concentrations did not display any distinct pattern. Ca concentration was positively correlated with pod yield in both the seasons.     

Sensory evaluation of fruit quality and nutritional composition of 20 breadfruit (Artocarpus, Moraceae) cultivars

Twenty breadfruit cultivars growing in afield genebank at Kahanu Garden, National Tropical Botanical Garden, Hana, Maui, Hawaii, were evaluated for sensory attributes and nutrient composition. A taste panel scored eight flavor/aroma attributes, five textural attributes, and color. There were significant differences (P ≤ 0.01) in aroma, visual texture, flavor intensity, sweetness, starchiness, moistness, stringiness, firmness, and color. The greatest differences were in color and texture. Nutrient analyses showed significant differences (P ≤ 0.05) for energy, carbohydrates, ash, crude protein, potassium, magnesium, sodium, iron, copper, and zinc. Considering the versatility of breadfruit as a food, its ease of production, and its nutritional value, the numerous good quality flavorful cultivars available should be more widely grown for sustainable agriculture and food security.     

Endogenous opiates: 1984

This paper is the seventh in an annual series of reviews of research involving the endogenous opiate peptides, each installment being restricted to work published during the previous year. As in the past three years, the review this year is limited to non-analgesic and behavioral studies of the opiate peptides. The specific topics this year include: stress, tolerance and dependence, consummatory responses, gastric and renal activity, alcohol, mental illness, learning and memory, cardiovascular responses, respiratory effects, thermoregulation, seizures and neurological disorders, activity, and miscellaneous other topics.     

External exoskeletal cavities in Coleoptera and their possible mycangial functions

This paper reviews the occurrence of external exoskeletal cavities in beetles and provides critical reassessment of their possible mycangial function. In most reported cases, the decision to attribute mycangial function to exoskeletal cavities was based solely on the combination of two factors: (i) observation of these cavities on beetle's body; and (ii) knowledge that this particular beetle species uses fungi as a food source. Such reasoning resulted in the assumption, occasionally premature and not supported by other evidence, that exoskeletal pits in the following families may function as mycangia: Rhysodidae, Ptiliidae, Staphylinidae, Hybosoridae, Scarabaeidae, Derodontidae, Ptinidae, Jacobsoniidae, Boganiidae, Cryptophagidae, Endomychidae, Erotylidae, Latridiidae, Nitidulidae, Phloeostichidae, Silvanidae, Sphindidae, Pyrochroidae, Anthribidae, Attelabidae and Curculionidae. We conclude that only two beetle families include species with adequately documented cases of external exoskeletal mycangia: (i) Curculionidae (some Scolytinae and Platypodinae); and (ii) the structurally complex mycangia of Attelabidae ( Euops females). One or more species of Sphindidae, Erotylidae, Silvanidae, and Latridiidae have likely functional mycangia. Exoskeletal pits with uncertain function are additionally reported from the following families: Cupedidae, Ommatidae, Lepiceridae, Carabidae, Histeridae, Hydraenidae, Leiodidae, Elmidae, Artematopodidae, Throscidae, Elateridae, Rhinorhipidae, Biphyllidae, Cerylonidae, Cyclaxyridae, Monotomidae, Mycetophagidae and Zopheridae. We also discuss the transport of fungal spores and conidia by waxy exudates or debris build up on beetle exoskeleton, as well as their passive attachment to the body.     

国内8款常用植物识别软件的识别能力评价

随着智能手机和人工智能技术的发展, 以手机app为载体的植物识别软件慢慢走进公众生活、科普活动和科研活动的各个方面。植物识别app的识别正确率是决定其使用价值和用户体验的关键因素。目前, 国内应用市场上有许多植物识别app, 它们的开发目的和应用范围各异, 软件本身的关注点、数据库来源、算法、硬件要求也存在很大差异。对于不同人群, 植物识别app有不同的意义, 如对于科研人员来说, 识别能力强的app是提高效率的一大工具; 对植物爱好者来说, 具一定准确率的识别app可以作为入门的工具。因此, 对各app的识别能力进行分析与评价显得尤为重要。本文选取了8款常用的app, 分别对400张已准确鉴定的植物图片进行识别, 其中干旱半干旱区、温带、热带和亚热带4个区各选取100张。这些图片共计122科164属340种, 涵盖了乔木、灌木、草本、草质藤本和木质藤本5种生长型, 包含23种国家级保护植物。种、属、科准确识别正确分别计4分、2分、1分, 以此标准对软件识别能力按总得分进行排序, 正确率得分由高到低依次为花帮主、百度识图、花伴侣、形色、花卉识别、植物识别、发现识花、微软识花。     

海蛎壳生物质资源再利用的研究进展*

海蛎是一种营养和医药价值较高的咸水双壳类动物,在世界各地被广泛养殖。海蛎壳副产品是一种天然生物质资源,由95%的碳酸钙和5%的有机基质组成。海蛎壳的多尺度、多层次“砖-泥”独特结构,使其具有良好的机械稳定性、生物相容性、可降解性和优异的吸附特性。首先,介绍了海蛎壳生物质的理化性质和天然独特微纳米结构,总结了海蛎壳在农业、工业、生物医药领域的研究现状,详细阐述了其在污水治理、土壤改良、天然抗菌剂(食品工业和生物医药)、骨组织工程、医药原料、生物填料、工业催化剂及分散载体、建筑工业填料、功能化涂料等领域的研究现状。其次,概述了利用生物转化技术将海蛎壳转化为生物能源、新型生物质材料等方面的研究进展。最后,展望了海蛎壳生物质资源及其衍生物未来在工业、农业、医药领域的潜在应用。     

A pilot study of lake Ma'rib,Yemen

We provide information on the location, capacity, climate, land tenure and use, vegetation, conservation, economic, and social value of a large artificial lake in Yemen. We also list the extant freshwater macrofauna of Ma'rib lake, which comprises leeches, crustaceans, insects, molluscs, fishes, amphibians and birds.     

Hepatic oxidative stress,up-regulation of pro-inflammatory cytokines,apoptotic and oncogenic markers following 2-methoxyethanol administrations in rats

2-methoxyethanol (2-ME) is an organic solvent widely used in the manufacture of brake fluids, paints, resins, varnish, nail polish, acetate cellulose, wood coloring, and as a plasticizer in plastics manufacturing. We therefore, investigated its effect on the liver, in a time-course study in male Wistar rats. Animals were orally administered 50 mg/kg body weight of 2-ME for a period of 7, 14, and 21 days. Following 7 days of administration of 2-ME, there was a significant increase in the level of Bax, c-Myc, K-Ras, TNF-α, IL-1β, IL-6, MDA and GPx activity, while the levels of Bcl-2, NO and GSH were significantly reduced compared with control. At the end of 14 days exposure, Bcl-2, and GSH levels, as well as GST activity, were significantly decreased, while levels of Bax, c-Myc, K-Ras, caspase-3, TNF-α, IL-1β, IL-6, MDA and NO were significantly increased compared with control. After 21 days of 2-ME administration, Bcl-2, IL-10, and GSH levels, as well as SOD and GST activities, were significantly decreased, while levels of Bax, c-Myc, K-Ras, caspase-3, p53, TNF-α, IL-1β, IL-6, MDA and NO were significantly increased compared with control. Lastly, liver histopathology confirmed and corroborated the biochemical findings reported above. We therefore, advised that exposures to 2-ME should be strictly avoided as it could trigger hepatic damage through the disorganization of the antioxidant system, up-regulation of inflammatory, apoptotic, and oncogenic markers in rats.     

Materials for Chinese Phyllanthoideae

The present paper is part of taxonomic study on Chinese Phyllanthoideae. Included in it are two new varieties, Leptopus esquirolii var. villosus and Drypetes hainanensis var. longistipitata, one new combination, Glochidion triandrum var. siamense, and seven new records in China: Drypetes salicifolia, D. hoaensis. Actephila subsessilis, Glochidion khasicum, G. nubigennum, Bridelia spiosa and B. poilanei. In addition, seventeen taxon names are newly reduced: Liodendron formosanum = Drypetes formosana, Liodendron matsumurae = Drypetes matsumurae, D. longipes = D. indica, Antidesma paxii = A. acidum, A. hiiranense, A. filipes and A. pentandrum var. hiiranense = A. japonicum, A. calvescens = A. montanum, A. microphyllum = A. venosum, Breynia stipitata var. formosana and B. jormosana = B. vitis-idaea, Glochidion zeylanicum var. tomentosum = G. hirsutum, G. rubidulum = G. thomsonii, G. acuminatum = G. triandrum, G. fagifolium and Phyllanthus fagifolius = Glochidion sphaerogynum, Bridelia penangiena = B. insulana, B. henryana = B. tomentosa. All the types are kept in SCBl and PE.     

Allenic and cumulenic lipids

Nowadays, about 200 natural allenic metabolites, more than 2700 synthetic allenic compounds, and about 1300 cumulenic structures are known. The present review describes research on natural as well as some biological active allenic and cumulenic lipids and related compounds isolated from different sources. Intensive searches for new classes of pharmacologically potent agents produced by living organisms have resulted in the discovery of dozens of such compounds possessing high anticancer, cytotoxic, antibacterial, antiviral, and other activities. Known allenic and cumulenic compounds can be subdivided on several structural classes: fatty acids, hydrocarbons, terpenes, steroids, carotenoids, marine bromoallenes, peptides, aromatic, cumulenic, and miscellaneous compounds. This review emphasizes the role of natural and synthetic allenic and cumulenic lipids and other related compounds as an important source of leads for drug discovery.     

辽宁省高等植物多样性编目

为给辽宁植物多样性保护提供本底数据, 更准确地评价植物濒危及保护等级, 以及更好地给农学、林学、生态学、系统学等研究提供可靠的基础性数据, 本文首次将几代人在辽宁境内发现的高等植物进行汇总、编目, 包括苔藓植物和维管束植物。苔藓植物根据正式发表的文献和中国科学院沈阳应用生态研究所东北生物标本馆(IFP)馆藏采自辽宁省全域的苔藓植物标本编制。维管束植物主要根据5个方面的信息整理: 作者多年野外调查的一手资料、文献、同行交流、公众提供信息、标本等。编目内容包括辽宁省高等植物总名录、辽宁省栽培植物名录、辽宁省外来植物名录、辽宁省仅有栽培植物的科属目录、辽宁省仅有外来植物的科属目录; 编目中涉及的物种均有科属地位、中文名、拉丁名、生境、产地(县级), 总名录中附有每个物种的信息凭证, 包括标本信息、文献信息或照片依据。本编目共计收录植物254科1,176属3,241种73亚种447变种119变型。其中, 苔藓植物为辽宁地区首次披露名录信息, 计83科205属491种4亚种7变种(含藓类52科156属373种1亚种5变种, 苔类29科46属114种3亚种2变种, 角苔类2科3属4种)。维管束植物虽非首次披露名录信息, 但与以往发布的维管束植物名录相比, 本次收录的种类数最多, 计171科971属2,750种69亚种440变种119变型(含石松类植物2科3属13种, 蕨类植物17科39属83种2亚种7变种, 裸子植物5科19属47种1亚种13变种2变型, 被子植物147科910属2,607种66亚种420变种117变型)。经统计, 辽宁省所有苔藓植物均为本土野生植物。维管束植物中, 野生植物计149科741属2,077种62亚种378变种93变型(含石松类植物2科3属13种, 蕨类植物17科39属83种2亚种7变种, 裸子植物4科8属12种6变种1变型, 被子植物145科133属1,969种60亚种365变种92变型), 栽培植物计104科390属673种7亚种62变种26变型(含裸子植物5科17属35种1亚种7变种1变型, 被子植物99科373属638种6亚种55变种25变型); 本土植物计158科796属2,235种65亚种421变种116变型(含石松类植物2科3属13种, 蕨类植物17科39属83种2亚种7变种, 裸子植物5科14属29种12变种2变型, 被子植物134科740属2,110种63亚种402变种114变型), 外来植物计88科316属515种4亚种19变种3变型(含裸子植物3科10属18种1亚种1变种, 被子植物85科306属497种3亚种18变种3变型)。本编目仅是辽宁省高等植物的阶段性汇总, 尚需要根据野外工作的拓展和研究工作的深入不断完善。