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Exploratory analysis of marked point patterns has previously been conducted using two disjoint techniques, namely the mark correlation function and spectral analysis. Our purpose here is to present two alternative autocovariance estimators to the mark correlation function which not only apply in both planar and lattice situations, but which in the lattice case can also be considered in terms of the inverse Fourier transform of the spectrum. Moreover, they can be applied to isotropic or anisotropic marked point patterns. Various examples are presented to show how these estimators perform when applied to data sets possessing different kinds of mark structure, and a rank test procedure is proposed to enable the construction of empirical tests of hypothesis. 相似文献
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Summary . In environmental risk analysis, it is common to assume the stochastic independence (or separability) between the marks associated with the random events of a spatial-temporal point process. Schoenberg (2004, Biometrics 60, 471–481) proposed several test statistics for this hypothesis and used simulated data to evaluate their performance. He found that a Cramér-von Mises-type test is powerful to detect gradual departures from separability although it is not uniformly powerful over a large class of alternative models. We present a semiparametric approach to model alternative hypotheses to separability and derive a score test statistic. We show that there is a relationship between this score test and some of the test statistics proposed by Schoenberg. Specifically, all are different versions of weighted Cramér-von Mises-type statistics. This gives some insight into the reasons for the similarities and differences between the test statistics' performance. We also point out some difficulties in controlling the type I error probability in Schoenberg's residual test. 相似文献
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Analysis of the spatial patterns of woody plants is important to better understand the ecological processes that govern the
worldwide expansion of woody plants across semi-arid ecosystems. Second-order characteristics of a marked spatial point pattern
of western juniper (Juniperus occidentalis subsp. occidentalis) were analyzed using Ripley’s K-functions and the pair-correlation function g. The marked point process of crown diameters was produced via two-dimensional wavelet analysis of a fine scale aerial photograph
at the woodland-steppe ecotone in the Reynolds Creek watershed in the Owyhee Mountains, southwestern Idaho.
Colonization of J. occidentalis stems from mature juniper trees growing in rocky, fire resistant areas. Although these areas introduce components of natural
heterogeneity within the landscape, the selected study area is situated within a single soil type, and we modeled the expansion
of juniper plants into previously juniper-free sagebrush steppe as a homogeneous point process with constant intensity.
Through this research we have identified two statistically significant spatial scales characteristic of J. occidentalis on the woodland/steppe ecotone: (1) We observed inhibition between J. occidentalis plants at distances <15 m, resulting in a regular pattern, rather than clumped or random. This short-distance inhibition
can be attributed to competition for water and other resources. Recruitment of young J. occidentalis occurs significantly more often in a direction away from older plants, maximizing the utilization of water and light resources,
and perpetuating the spread of the species into previously juniper-free shrub-steppe. (2) J. occidentalis on the ecotone exhibits significant clustering within a 30–60 m radius. Bivariate point pattern analyses provide evidence
that, within a distance of 50–70 m, there is a spatial dependence in tree size such that medium trees are more likely than
small trees to be close to large trees. We attribute these phenomena to the fact that juniper seeds are commonly dispersed
by berry-eating birds with small territories (0.3–1 ha). Beyond a distance of 50–70 m, juniper plants are randomly distributed,
suggesting that additional long-range seed dispersal processes are at work. We further acknowledge the importance of including
a reference to spatial scale when formulating hypotheses in statistical analysis of spatio-temporal point patterns. 相似文献
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This paper presents new models for marked point processes for describing forestry data. In these models two factors play a role: Long‐range variability is modeled by a random field, which may describe environmental variability, while short‐range variability is caused by the interaction of points of two classes. These models may help in the interpretation of empirical mark variograms as is shown by two examples from forestry statistics. 相似文献
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Kühlmann-Berenzon S Heikkinen J Särkkä A 《Biometrical journal. Biometrische Zeitschrift》2005,47(4):517-526
The influence potential on a quadrat (IPQ) is an index for measuring the ecological effect that trees have on understory vegetation observed in a quadrat of a plot. IPQ is defined as the sum of the effect of every trees in the plot, where the effect depends on the size of the tree and the distance between the tree and the quadrat. Since only the trees in the plot have been observed and not the trees outside the plot, the true IPQ may be underestimated. Existing edge corrections are not appropriate for this case. We propose a correction that consists of adding the expected IPQ due to effects of trees outside the plot to the observed IPQ. The expectation is obtained by applying the Campbell theorem for stationary marked point processes. Data from the 1985-86 National Forest Inventory of Finland was used to calculate IPQ for six quadrats systematically allocated to each of 1240 plots. The implementation of the correction for this data is described. The distributions of IPQ with and without the correction proved the existence of edge effects and the effectiveness of the correction to eliminate the bias. This method has the potential to be applied to other additive functions. 相似文献
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Johnson TD 《Biometrics》2007,63(4):1207-1217
Many challenges arise in the analysis of pulsatile, or episodic, hormone concentration time series data. Among these challenges is the determination of the number and location of pulsatile events and the discrimination of events from noise. Analyses of these data are typically performed in two stages. In the first stage, the number and approximate location of the pulses are determined. In the second stage, a model (typically a deconvolution model) is fit to the data conditional on the number of pulses. Any error made in the first stage is carried over to the second stage. Furthermore, current methods, except two, assume that the underlying basal concentration is constant. We present a fully Bayesian deconvolution model that simultaneously estimates the number of secretion episodes, as well as their locations, and a nonconstant basal concentration. This model obviates the need to determine the number of events a priori. Furthermore, we estimate probabilities for all \"candidate\" event locations. We demonstrate our method on a real data set. 相似文献
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On prequential model assessment in life history analysis 总被引:1,自引:0,他引:1
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A semiparametric additive regression model for longitudinal data 总被引:2,自引:0,他引:2
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We study tools for checking the validity of a parametric regressionmodel. When the dimension of the regressors is large, many ofthe existing tests face the curse of dimensionality or requiresome ordering of the data. Our tests are based on the residualempirical process marked by proper functions of the regressors.They are able to detect local alternatives converging to thenull at parametric rates. Parametric and nonparametric alternativesare considered. In the latter case, through a proper principalcomponent decomposition, we are able to derive smooth directionaltests which are asymptotically distribution-free under the nullmodel. The new tests take into account precisely the geometryof the model. A simulation study is carried through andan application to a real dataset is illustrated. 相似文献
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Sabine Landau Sophia Rabe‐Hesketh Ian P. Everall 《Biometrical journal. Biometrische Zeitschrift》2004,46(1):19-34
A common problem in neuropathological studies is to assess the spatial patterning of cells on tissue sections and to compare spatial patterning between disorder groups. For a single cell type, the cell positions constitute a univariate point process and interest focuses on the degree of spatial aggregation. For two different cell types, the cell positions constitute a bivariate point process and the degree of spatial interaction between the cell types is of interest. We discuss the problem of analysing univariate and bivariate spatial point patterns in the one‐way design where cell patterns have been obtained for groups of subjects. A bootstrapping procedure to perform a nonparametric one‐way analysis of variance of the spatial aggregation of a univariate point process has been suggested by Diggle, Lange and Bene? (1991). We extend their replication‐based approach to allow the comparison of the spatial interaction of two cell types between groups, to include planned comparisons (contrasts) and to assess whole groups against complete spatial randomness and spatial independence. We also accommodate several replicate tissue sections per subject. An advantage of our approach is that it can be applied when processes are not stationary, a common problem in brain tissue sections since neurons are arranged in cortical layers. We illustrate our methods by applying them to a neuropathological study to investigate abnormalities in the functional relationship between neurons and astrocytes in HIV associated dementia. (© 2004 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim) 相似文献
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Variograms, which are frequently used in geostatistics, are of value also in the statistics of marked point processes. When the marks come from a random field which is independent of the point process, ideas of geostatistics suffice for the interpretation of point process variograms. When this model is not appropriate, interactions between the points lead to point process variograms having forms which are unusual in geostcistics. This is shown by three theoretical examples and one from forestry. 相似文献
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The etiology of chronic Inflammatory Bowel Diseases (IBD) remains unknown, with both genetic and environmental risk factors having been implicated. A recent collaborative study of IBD provides clinical data from families with three or more affected first-degree relatives. The scientific question is whether specific clinical characteristics aggregate among affected individuals within families. Gastroenterological researchers have examined the number of concordant familial pairs in familial aggregation studies, but methods and results have been discrepant. This article investigates concepts of concordance and gives a comprehensive statistical treatment for testing concordance of various clinical traits in familial studies. For dichotomous traits, the distribution of this statistic under the null hypothesis of no familial aggregation is obtained by three methods: asymptotic, probability generating function, and permutation. The permutation method is extended to analyze aggregation for non-dichotomous traits and co-aggregations between two traits. We apply the permutation method to analyze the aforementioned multiply-affected IBD family data. Evidence is found for familial clustering of various traits, some of which are not revealed in existing studies. Such analyses provide a basis for investigating the dependence of trait aggregation upon genetic or environmental risk factors. 相似文献
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Thomas H. Scheike 《Biometrical journal. Biometrische Zeitschrift》1997,39(1):57-67
This paper reviews a general framework for the modelling of longitudinal data with random measurement times based on marked point processes and presents a worked example. We construct a quite general regression models for longitudinal data, which may in particular include censoring that only depend on the past and outside random variation, and dependencies between measurement times and measurements. The modelling also generalises statistical counting process models. We review a non-parametric Nadarya-Watson kernel estimator of the regression function, and a parametric analysis that is based on a conditional least squares (CLS) criterion. The parametric analysis presented, is a conditional version of the generalised estimation equations of LIANG and ZEGER (1986). We conclude that the usual nonparametric and parametric regression modelling can be applied to this general set-up, with some modifications. The presented framework provides an easily implemented and powerful tool for model building for repeated measurements. 相似文献
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A. Degenhardt 《Biometrical journal. Biometrische Zeitschrift》1999,41(4):457-470
Tree distribution patterns in forest stands can be considered as marked point processes in the plane. Gibbs processes are a natural tool for modelling such point processes because the interaction between trees can be taken into account and described by pair potential functions. Consequently, tree distribution patterns can be characterized with few parameters and be compared quantitatively. By means of forest stand examples it is shown how these parametric models can be used for the analysis of tree distribution patterns at different time points. 相似文献