Systematics of the Protohermes xanthodes species-group in eastern Asia (Megaloptera: Corydalidae)

A new species‐group of the dobsonfly genus Protohermes is proposed, the Protohermes xanthodes species‐group. Three species from eastern Asia belonging to the new species‐group are redescribed and illustrated. Phylogenetic relationships among the species in this group, as well as the biogeography of these species, are discussed on the basis of a cladistic analysis.     

Latitudinal variation in soil nematode communities under climate warming‐related range‐expanding and native plants

Current climate change has led to latitudinal and altitudinal range expansions of numerous species. During such range expansions, plant species are expected to experience changes in interactions with other organisms, especially with belowground biota that have a limited dispersal capacity. Nematodes form a key component of the belowground food web as they include bacterivores, fungivores, omnivores and root herbivores. However, their community composition under climate change‐driven intracontinental range‐expanding plants has been studied almost exclusively under controlled conditions, whereas little is known about actual patterns in the field. Here, we use novel molecular sequencing techniques combined with morphological quantification in order to examine nematode communities in the rhizospheres of four range‐expanding and four congeneric native species along a 2,000 km latitudinal transect from South‐Eastern to North‐Western Europe. We tested the hypotheses that latitudinal shifts in nematode community composition are stronger in range‐expanding plant species than in congeneric natives and that in their new range, range‐expanding plant species accumulate fewest root‐feeding nematodes. Our results show latitudinal variation in nematode community composition of both range expanders and native plant species, while operational taxonomic unit richness remained the same across ranges. Therefore, range‐expanding plant species face different nematode communities at higher latitudes, but this is also the case for widespread native plant species. Only one of the four range‐expanding plant species showed a stronger shift in nematode community composition than its congeneric native and accumulated fewer root‐feeding nematodes in its new range. We conclude that variation in nematode community composition with increasing latitude occurs for both range‐expanding and native plant species and that some range‐expanding plant species may become released from root‐feeding nematodes in the new range.     

Oreocharis duyunensis (Gesneriaceae), a new species from Guizhou,China

Oreocharis duyunensis Z.Y. Li, X.G. Xiang et Z.Y. Guo (Gesneriaceae), endemic to Guizhou, China, is described as a new species. The new species is easily distinguished from other Oreocharis species by having a white, stellate ring‐like disc. Morphologically, the species is similar to Oreocharis chienii (Chun) Mich. Möller & A. Weber but differs by its densely white pilose leaves, mixed brown‐pilose, pubescent and glandular‐pubescent peduncle and pedicle, white stellate ring‐like disc, and linear‐lanceolate capsule. Based on phylogenetic reconstruction and interspecific genetic distances of nuclear ITS and chloroplast trnL‐F regions, O. duyunensis is a new species with uncertain phylogenetic position.     

A new species of Astyanax Baird & Girard (Characiformes: Characidae) from the Rio Paraguaçu basin,Chapada Diamantina,Bahia, Brazil,with comments on bony hooks on all fins

A new species of Astyanax from the Rio Paraguaçu basin, Bahia, Brazil, is described. This new species is distinguished from its congeners known to occur in Brazilian drainages by the presence of small bony hooks on all fins of mature males. Furthermore, the new species can be diagnosed by its colour pattern, which consists of a unique vertically elongated humeral blotch, a conspicuous dark drop‐shaped horizontal blotch over the caudal peduncle, tapering anteriorly and not extending to the median caudal‐fin rays, and by the absence of a conspicuous broad dark midlateral stripe. The new species differs further by having the greatest body depth just anterior to the dorsal‐fin origin, 32–35 perforated scales in the lateral line and a reduced number of branched anal‐fin rays (16–20). Apparently, the new species does not fit into any species complex of Astyanax. The occurrence of bony hooks on all fins of Astyanax is discussed.     

Molecular monitoring of fungal communities in air samples by denaturing high‐performance liquid chromatography (D‐HPLC)

Aims: To describe a new molecular technique for the assessment of fungal diversity in the air. Methods and Results: Air samples were collected every week in a henhouse in France during a 15‐week period. After air sampling, the collecting membrane was diluted, and the liquid was used for subsequent cultivation and molecular analysis: PCR‐temperature temporal gradient electrophoresis (TTGE), which has already been used for the identification of fungal species in air samples and PCR‐denaturing high‐performance liquid chromatography (D‐HPLC), a new technique for the analysis of complex microbial populations. D‐HPLC profiles were reproducible from run‐to‐run, and several fungal organisms could be identified at the species level by sequencing. Conclusions: PCR‐D‐HPLC enabled the identification of fungal species (both Ascomycota and Basidiomycota) that may be encountered in air. The new technique allowed the detection of more fungal species than did the PCR‐TTGE technique. However, some fungal species were detected only by PCR‐TTGE, suggesting that PCR‐D‐HPLC and PCR‐TTGE are complementary. Significance and Impact of the Study: PCR‐D‐HPLC represents a considerable saving in time over currently available procedures for detection and identification of fungal organisms in air. However, the fungal diversity detected by PCR‐D‐HPLC or by PCR‐TTGE was lower than that revealed by culture.     

Quandaries of a decade‐long restoration experiment trying to reduce invasive species: beat them,join them,give up,or start over?

We evaluate the outcomes and consequences of a decade‐long restoration project in a Hawaiian lowland wet forest as they relate to long‐term management actions. Our initial study was designed both to promote native biodiversity and to develop knowledge that would enable land management agencies to restore invaded forests. Our premise of success followed the prevalent perception that short‐term management, such as removal of invasive species, ideally translates into long‐term and sustainable restoration. We were therefore disappointed and perhaps discouraged in our results—little recovery of native biodiversity despite ongoing and labor‐intensive management. Not only did we fail to return the invaded forest to a native‐dominated system but also our efforts lead to recruitment of new non‐native species assemblages. The sobering truth of many restoration projects in Hawaii and elsewhere is that we can never completely walk away and “consider the job finished,” or we have to accept that some ecosystems cannot be returned to an all‐native state. Essentially, costs of restoration may outweigh the accomplishment. This setback gave us an opportunity to reconsider and modify our initial approach. By starting over with a new direction using both native and non‐invasive but non‐native species, we have adopted a new philosophy of “join them.” In our revision, we changed the players in the game by following invasive species removal with outplantings of native and non‐invasive non‐native species that will functionally fill missing roles in the ecosystem. We link social interest in the new experiment to changing attitudes about naturalness.     

A new species of Zorotypus (Insecta,Zoraptera, Zorotypidae) and the earliest known suspicious mating behavior of Zorapterans from the mid‐cretaceous amber of northern Myanmar

A new species of the insect order Zoraptera, Zorotypus pusillus, sp. n., is described and illustrated based on two ill‐preserved specimens in mid‐Cretaceous amber from the Hukawng Valley in northern Myanmar. Compared with known extinct zorapterans, the new species possesses eight‐segmented antennae and can be readily distinguished from all other extinct and recent members of the order in the presence of a shallow groove connecting two antennal sockets and by unique spination of the metafemur and metatibia. The earliest known suspicious mating behavior of Zoraptera, the intromittent organ of the fossil zorapterans, the egg, and the earliest known basal plate of the male genitalia are briefly discussed. The genitalia of new species are used as an intromittent organ in the majority of mating patterns among living zorapterans. The mating patterns (a copula is performed by males and females) of the most extant species have been present since at least the mid‐Cretaceous. A shared similar aedeagal structure in the new species and in the most extant species suggests an analogous mating behavior.     

New remarkable sexually dimorphic miniature species of Hyphessobrycon (Characiformes: Characidae) from the upper Rio Tapajós basin

A new miniature species of Hyphessobrycon is described from an affluent of the Rio Papagaio, tributary of the Rio Juruena, upper Rio Tapajós basin, Mato Grosso State, Brazil. The new species can be distinguished from its congeners by having a remarkable secondary sexual dimorphism in its live colouration (males are red and females yellow), well‐defined and relatively narrow dark midlateral stripe extending from tip of snout to tip of middle caudal‐fin rays, absence of humeral blotch, 15–18 branched anal‐fin rays and five or six branched pelvic‐fin rays. The sexually dimorphic colouration of the new species is briefly discussed regarding its temporal variation.     

A species‐centered approach for uncovering generalities in organism responses to habitat loss and fragmentation

Theoretical models predict strong influences of habitat loss and fragmentation on species distributions and demography, but empirical studies have shown relatively inconsistent support across species and systems. We argue that species’ responses to landscape‐scale habitat loss and fragmentation are likely to appear less idiosyncratic if it is recognized that species perceive the same landscapes in different ways. We present a new quantitative approach that uses species distribution models (SDMs) to measure landscapes (e.g. patch size, isolation, matrix amount) from the perspective of individual species. First, we briefly summarize the few efforts to date demonstrating that once differences in habitat distributions are controlled, consistencies in species’ responses to landscape structure emerge. Second, we present a detailed example providing step‐by‐step methods for application of a species‐centered approach using freely available land‐cover data and recent statistical modeling approaches. Third, we discuss pitfalls in current applications of the approach and recommend avenues for future developments. We conclude that the species‐centered approach offers considerable promise as a means to test whether sensitivity to habitat loss and fragmentation is mediated by phylogenetic, ecological, and life‐history traits. Cross‐species generalities in responses to habitat loss and fragmentation will be challenging to uncover unless landscape mosaics are defined using models that reflect differing species‐specific distributions, functional connectivity, and domains of scale. The emergence of such generalities would not only enhance scientific understanding of biotic processes driving fragmentation effects, but would allow managers to estimate species sensitivities in new regions.     

Measuring beta‐diversity from taxonomic similarity

Question: The utility of beta (β‐) diversity measures that incorporate information about the degree of taxonomic (dis)similarity between species plots is becoming increasingly recognized. In this framework, the question for this study is: can we define an ecologically meaningful index of β‐diversity that, besides indicating simple species turnover, is able to account for taxonomic similarity amongst species in plots? Methods: First, the properties of existing measures of taxonomic similarity measures are briefly reviewed. Next, a new measure of plot‐to‐plot taxonomic similarity is presented that is based on the maximal common subgraph of two taxonomic trees. The proposed measure is computed from species presences and absences and include information about the degree of higher‐level taxonomic similarity between species plots. The performance of the proposed measure with respect to existing coefficients of taxonomic similarity and the coefficient of Jaccard is discussed using a small data set of heath plant communities. Finally, a method to quantify β‐diversity from taxonomic dissimilarities is discussed. Results: The proposed measure of taxonomic β‐diversity incorporates not only species richness, but also information about the degree of higher‐order taxonomic structure between species plots. In this view, it comes closer to a modern notion of biological diversity than more traditional measures of β‐di‐versity. From regression analysis between the new coefficient and existing measures of taxonomic similarity it is shown that there is an evident nonlinearity between the coefficients. This nonlinearity demonstrates that the new coefficient measures similarity in a conceptually different way from previous indices. Also, in good agreement with the findings of previous authors, the regression between the new index and the Jaccard coefficient of similarity shows that more than 80% of the variance of the former is explained by the community structure at the species level, while only the residual variance is explained by differences in the higher‐order taxonomic structure of the species plots. This means that a genuine taxonomic approach to the quantification of plot‐to‐plot similarity is only needed if we are interested in the residual system's variation that is related to the higher‐order taxonomic structure of a pair of species plots.     

Aspidistra obtusata sp. nov. (Asparagaceae) from Vietnam

Aspidistra obtusata is described and illustrated as a new species from southern Vietnam. The new species resembles A. truongii, but differs in smaller diameter of perigone (12.6–14.9 mm vs 25–35 mm), shape of tepals (elliptic, obtuse vs triangular‐ovate) and pistil (widely obconic vs mushroom‐shaped). A molecular characterization of the new species (based on data of plastid psbA‐trnH and nuclear 5S‐NTS regions) is also given, and compared with the most similar congeners.     

A Bayesian approach for estimating length‐weight relationships in fishes

A Bayesian hierarchical approach is presented for the estimation of length‐weight relationships (LWR) in fishes. In particular, estimates are provided for the LWR parameters a and b in general as well as by body shape. These priors and existing LWR studies were used to derive species‐specific LWR parameters. In the case of data‐poor species, the analysis includes LWR studies of closely related species with the same body shape. This approach yielded LWR parameter estimates with measures of uncertainty for practically all known 32 000 species of fishes. Provided is a large LWR data set extracted from www.fishbase.org , the source code of the respective analyses, and ready‐to‐use tools for practitioners. This is presented as an example of a self‐learning online database where the addition of new studies improves the species‐specific parameter estimates, and where these parameter estimates inform the analysis of new data.     

Isolation and characterization of microsatellite markers in the new world screw‐worm Cochliomyia hominivorax (Diptera: Calliphoridae)

The new world screw‐worm, Cochliomyia hominivorax, is one of the most important parasitic insect pests. This species causes myiasis and, consequently, significant losses to livestock industries in neotropical regions. As part of an investigation into the genetic variability and population structure of the new world screw‐worm, a set of 10 polymorphic microsatellite markers was isolated from an AC‐enriched genomic library. Amplification of the reported loci in 30 screw‐worms revealed an average of 6.9 alleles per locus with expected heterozygosities ranging from 0.3831 to 0.8022. Cross‐species amplifications suggested that these loci may be useful in other Calliphoridae species.     

A new statistical approach for assessing similarity of species composition with incidence and abundance data

The classic Jaccard and Sørensen indices of compositional similarity (and other indices that depend upon the same variables) are notoriously sensitive to sample size, especially for assemblages with numerous rare species. Further, because these indices are based solely on presence–absence data, accurate estimators for them are unattainable. We provide a probabilistic derivation for the classic, incidence‐based forms of these indices and extend this approach to formulate new Jaccard‐type or Sørensen‐type indices based on species abundance data. We then propose estimators for these indices that include the effect of unseen shared species, based on either (replicated) incidence‐ or abundance‐based sample data. In sampling simulations, these new estimators prove to be considerably less biased than classic indices when a substantial proportion of species are missing from samples. Based on species‐rich empirical datasets, we show how incorporating the effect of unseen shared species not only increases accuracy but also can change the interpretation of results.