Determination of a relationship between chitinase activity and microbial diversity in chitin amended compost

By using denaturing gradient gel electrophoresis (DGGE) and simultaneously measuring the enzymatic activity of chitinase, we could link genetic diversity of the indigenous microbial communities with chitinase activity in compost samples. A garden/park waste compost and a source separated organic household waste compost, showed different genetic diversity as measured by PCR-DGGE of total DNA extracted from the composts. The household waste compost had the highest chitinase activity. To increase chitinase activity, the two composts were amended with chitin. This addition induced a change in both the bacterial and fungal genetic diversity when compared to the non-amended compost samples. Likewise, both composts reacted to the addition of chitin with an increase in chitinase activity. Thus, a relationship between genetic diversity and chitinase activity was established for the composts in question. The N-mineralization in the household waste compost was apparently increased by the addition of chitin, while such an effect was not observed in the garden/park waste compost.     

Transformation of buffalo manure by composting or vermicomposting to rehabilitate degraded tropical soils

The addition of composted buffalo manure may lead to qualitative and quantitative improvement of the organic matter content of degraded tropical agricultural soils in Northern Vietnam. The objectives of this study were to follow the biochemical changes occurring during composting of buffalo manure with and without earthworms during 3 months and to study the effect of the end products (compost and vermicompost) on soil biochemical parameters and plant growth after two months of incubation under controlled conditions in an open pot experiment. Our conceptual approach included characterisation of organic matter of the two composts before and after addition to soil by elemental, isotopic analysis and analytical pyrolysis and comparison with conventional fertilisation. We also analysed for lignin content and composition.Our results showed that composting in the presence of earthworms led to stronger transformation of buffalo manure than regular composting. Vermicompost was enriched in N-containing compounds and depleted in polysaccharides. It further contained stronger modified lignin compared to regular compost. In the bulk soil, the amendment of compost and vermicompost led to significant modification of the soil organic matter after 2 months of exposure to natural weather conditions. The lignin component of SOM was unaffected whatever the origin of the organic amendment. Compost and vermicompost amendments both enhanced aggregation and increased the amount of organic matter in water stable aggregates. However, vermicompost is preferable to compost due to its beneficial effect on plant growth, while having similar positive effects on quantity and quality of SOM.     

Evaluation of “alperujo” composting based on organic matter degradation, humification and compost quality

The main by-product generated by the Spanish olive oil industry, a wet solid lignocellulosic material called "alperujo" (AL), was evaluated as a composting substrate by using different aeration strategies and bulking agents. The experiments showed that composting performance was mainly influenced by the type of bulking agent added, and by the number of mechanical turnings. The bulking agents tested in this study were cotton waste, grape stalk, a fresh cow bedding and olive leaf; the latter showed the worse performance. Forced ventilation alone was revealed to work inadequately in most of the experiments. The composting process involved a substantial degradation of the organic substrate with average losses of 48.4, 28.6, 53.7 and 57.0% for total organic matter, lignin, cellulose and hemicellulose, respectively. Both organic matter biodegradation and humification were greatly influenced by the lignocellulosic nature of the starting material, which led to low organic matter and nitrogen loss rates and a progressive increase in more humified substances, as revealed by the end-values of the humification indices. The resulting composts were of good quality in terms of nutrient content, stabilised and non-phytotoxic organic matter and low heavy metal content. This demonstrates that composting technology can be used as an alternative treatment method to turn AL into compost that can be used as organic amendments or fertilisers for agricultural systems.     

Citrus compost and its water extract for cultivation of melon plants in greenhouse nurseries. Evaluation of nutriactive and biocontrol effects

Two different types of citrus composts, and their water extracts, were tested with regard to their utilisations as partial substitutes for peat in growing media for melon seedlings in greenhouse nurseries. Both compost showed higher plant growth than peat. Compost composed by citrus waste and green residue (C2) showed greater plant growth than compost obtained from the same organic matrices mentioned above further the addition of sludge obtained from citrus industry (C1). Compost C2 showed a greater auxinic effect than C1 and it was the only one that showed cytokinic effect. Both composts also demonstrated a biocontrol effect against Fusarium oxysporum for melon plants: the effects were also higher in C2 than in C1. Higher number of isolated fungi was active against F. oxysporum in compost C2, than compost C1. No different bacterial biocontrol efficacy was observed between both composts. The water extracts of both composts gave lower plant yields than their solid matrices, their relative effects being similar to those of the solid composts (C2 extract gave higher plant yields than the extract from C1). The biocontrol effects of compost water extracts followed the same trend.     

Effects of olive mill wastewater addition in composting of agroindustrial and urban wastes

In order to study the suitability of olive mill wastewater (OMW) for composting, thisliquid waste was added to two different mixtures of agroindustrial and urban wastesand the composting process was compared with two other piles of similar composition,but without OMW. These four piles were studied in a pilot plant using the Rutgers staticpile system. The addition of OMW produced a greater proportion of degradable organic matter or a higher degradation rate, higher electrical conductivity values, greater losses of total N and lower nitrification than in piles without OMW. Its addition also restricted the increase of the cation exchange capacity and provoked the appearance of phytotoxicity or a longer persistence of phytotoxicity. However, in general, all the composts showed increases in the cation exchange capacity, the percentage of humic acid-like carbon, the polymerisation ratio of these humic substances (which revealed that the organic matter had been humified during composting) and the germination index, the latter indicating the reduction of phytotoxicity during the process.     

Evaluation of maturity and stability parameters of composts prepared from agro-industrial wastes

The objective of this study was to evaluate changes in physical, chemical and biological parameters to assess the maturity and stability of composts prepared from mixture of different farm and agro-industrial wastes over a period of 150 days. All the composts appeared granular, dark grey in color without foul odor and attained an ambient temperature at 120 days of composting indicating the stable nature of composts. Correlation analysis showed that the optimal values of the selected parameters for our experimental conditions are as follows: organic matter loss >42%, C:N ratio <15, water soluble organic carbon (C(w)):organic N (N(org)) ratio <0.55, humic acid (HA):fulvic acid (FA) ratio >1.9, humification index (HI) >30%, cation exchange capacity (CEC):total organic carbon (TOC) ratio >1.7 and germination index (GI) >70%. Compost enriched with sewage sludge, pressmud and poultry waste matured earlier compared to composts either enriched with distillery effluent or un-enriched.     

Characterization of different compost extracts using Fourier-transform infrared spectroscopy (FTIR) and thermal analysis

Compost extract or “compost tea” is a liquid extract of compost obtained by mixing compost and water for a defined period of time. Compost tea contains nutrients and a range of different organisms and is applied to the soil or directly to plants with the principal aim of suppressing certain plant diseases. In addition, the application of compost tea supplies nutrients and organic matter to the soil. Thermal analysis and Fourier transform infrared spectroscopy (FTIR) are two widely applied analytical techniques for establishing the stability of compost, and although numerous studies have evaluated the capacity of compost tea to suppress plant diseases, there are no studies employing these techniques to characterize compost-tea. For the present study, 12 compost extracts were produced under varying conditions in a purpose-built reactor. Two different composts, an stable compost produced from manure and an unstable compost produced from municipal solid waste, respectively, two aeration systems (aerated and non-aerated extracts) and three temperatures (10, 20 and 30°C) were used in these experiments. The extracts were freeze-dried and subsequently analysed, together with the two composts, by means of FTIR and thermal analysis. Extracts produced from high stability compost, independently of the conditions of aeration and temperature, showed very similar results. In contrast, differences among extracts produced from the unstable compost were more noticeable. However, the different conditions of aeration and temperature during the production of the extracts only explained partially these differences, since the transformations undergone by compost over the 3 months that the experiments lasted were also reflected in the composition of the extracts. In spite of everything, extraction process favoured the degradation of easily oxidizable organic matter, which was more abundant in unstable compost. This degradation was more intense for non-aerated processes, probably due to the longer duration of these (10 days) with respect to aerated extractions (2 days). The effect of temperature was not clear in these experiments, although high temperatures could increase micro organism activity and consequently favour the degradation of easily oxidizable organic matter.     

Utilization of vinasse for the production of polyhydroxybutyrate by <Emphasis Type="Italic">Haloarcula marismortui</Emphasis>

Vinasse, a recalcitrant waste of the ethanol industry was employed for the production of polyhydroxyalkanoate (PHA) by the extremely halophilic archaeon, Haloarcula marismortui in shake flasks. The PHA was recovered by osmotic lysis of the cells and subsequent purification by sodium hypochlorite and organic solvents. Through UV–vis spectroscopy, differential scanning calorimetry, Fourier transform infrared, and nuclear magnetic resonance spectroscopy, the PHA was found to have characteristics very similar to that of the standard polyhydroxybutyrate (PHB) from Sigma. Inhibitory effect of polyphenols contained in vinasse was assessed by a quick and reliable cup-plate agar-diffusion method. Raw vinasse (10%) was utilized leading to accumulation of 23% PHA (of cell dry weight) and following an efficacious pre-treatment process through adsorption on activated carbon, 100% pre-treated vinasse could be utilized leading to 30% accumulation of PHB by H. marismortui. Maximum specific growth rate, specific production rate, and volumetric productivity attained using 10% raw vinasse were comparable to that obtained using a previously reported nutrient deficient medium (NDM), while the values with 100% pre-treated vinasse were higher than that determined using NDM medium. This is the first report of polyhydroxybutyrate production by a halophilic microorganism utilizing vinasse.     

Influence of different organic waste materials on the transformation of nitrogen in soils

Organic waste materials like crop residues, well-decomposed cow dung, composts, and other rural and urban wastes are considered highly useful resources in enhancing soil fertility and also in build-up of soil organic matter. Organic matter decomposition provides plant nutrients in soil, which in turn increases crop productivity. Availability of nutrients and nitrogen (N) and phosphorus from organic waste materials is dependent upon the nature of organic residues, climatic conditions, and soil moisture activity. Keeping these factors in view, the present investigation was undertaken to study the transformation of N from different organic waste materials in two contrasting soils from an eastern India, subtropical region. The results showed that the amounts of ammoniacal-N (NH4-N), nitrate-N (NO3-N), hydrolysable N (HL-N), and nonhydrolysable (NHL-N) were increased for up to 60 days of soil submergence and increased further with the increase (1% by weight of soil) of organic residue application. Considering the effect of various organic waste materials, it was found that the amounts of NH4-N, NO3-N, HL-N, and NHL-N were higher with the application of groundnut hull as compared to wheat straw and potato skin, which may be due to relatively narrow carbon:N ratio of groundnut (22:43) than that of wheat straw (62:84) and potato skin (71:32); however, the results showed that the release of NH4-N, NO3-N, HL-N, and NHL-N was in the order of groundnut hull > wheat straw > potato skin.     

Long-Term Survival of Pathogenic and Sanitation Indicator Bacteria in Experimental Biowaste Composts

For economic, agricultural, and environmental reasons, composting is frequently used for organic waste recycling. One approach to limiting the potential risk from bacterial food-borne illnesses is to ensure that soil amendments and organic fertilizers are disinfected. However, more knowledge concerning the microbiological safety of composted substrates other than sludge and manure is necessary. Experimental in-vessel biowaste composts were used to study the survival of seeded Listeria monocytogenes, Salmonella enterica subsp. enterica serotype Enteritidis, and Escherichia coli. Four organic waste mixtures, containing various proportions of paper and cardboard, fruits and vegetables, and green waste, were composted in laboratory reactors with forced aeration. The physicochemical and microbiological parameters were monitored for 12 weeks during composting. The survival of bacteria over a 3-month period at 25°C was assessed with samples collected after different experimental composting times. Strain survival was also monitored in mature sterilized composts. Nonsterile composts did not support pathogen growth, but survival of seeded pathogens was observed. Salmonella serovar Enteritidis survived in all composts, and longer survival (3 months) was observed in mature composts (8 and 12 weeks of composting). Mature biowaste composts may support long-term survival of Salmonella serovar Enteritidis during storage at room temperature. E. coli and L. monocytogenes survival was observed only in 4-week-old composts and never in older composts. Proper composting may prevent long-term survival of E. coli and L. monocytogenes. These results suggest that like composted sewage sludge or manure, domestic waste composts may support pathogen survival. Survival was not related to the physicochemical characteristics of the composts.     

Protein and energy value of vinasse for pigs

A vinasse, originating as the condensed molasses residue from the microbial production of citric acid, was chemically analyzed and given to growing pigs to determine its protein and energy value. It contained, per kg dry matter (62.6%), 185 g crude protein, 538 g N-free extracts, 48 g total sugar, 277 g ash and 12.8 MJ gross energy. Ammonia, betaine and amino acids (about half glutamic acid) accounted for 3.5, 9.1 and 28.6%, respectively, of the crude-protein N. In a 25-day balance trial with the final 10 days as collection period, ten pigs initially weighing 33 kg were pair-fed daily an average of about 1 kg of dry matter of either a basal diet (95% ground barley plus 5% cellulose) or of a mixed diet composed of, on dry basis, 77% basal diet plus 23% vinasse. Partial digestibility of components in the vinasse was: organic matter, 52%; crude protein, 45%; N-free extract, 58%; ash, 83%; and gross energy, 42%. Average daily gain and N retention were not different between dietary groups. The vinasse contained, per kg dry matter, 5.40 MJ DE and 3.61 MJ ME compared with 14.96 MJ DE and 14.48 MJ ME for the dry basal diet. The conclusion is that this vinasse, according to its low protein and energy value, can provide only a small percentage of the daily ration for pigs.     

Long-term survival of pathogenic and sanitation indicator bacteria in experimental biowaste composts

For economic, agricultural, and environmental reasons, composting is frequently used for organic waste recycling. One approach to limiting the potential risk from bacterial food-borne illnesses is to ensure that soil amendments and organic fertilizers are disinfected. However, more knowledge concerning the microbiological safety of composted substrates other than sludge and manure is necessary. Experimental in-vessel biowaste composts were used to study the survival of seeded Listeria monocytogenes, Salmonella enterica subsp. enterica serotype Enteritidis, and Escherichia coli. Four organic waste mixtures, containing various proportions of paper and cardboard, fruits and vegetables, and green waste, were composted in laboratory reactors with forced aeration. The physicochemical and microbiological parameters were monitored for 12 weeks during composting. The survival of bacteria over a 3-month period at 25 degrees C was assessed with samples collected after different experimental composting times. Strain survival was also monitored in mature sterilized composts. Nonsterile composts did not support pathogen growth, but survival of seeded pathogens was observed. Salmonella serovar Enteritidis survived in all composts, and longer survival (3 months) was observed in mature composts (8 and 12 weeks of composting). Mature biowaste composts may support long-term survival of Salmonella serovar Enteritidis during storage at room temperature. E. coli and L. monocytogenes survival was observed only in 4-week-old composts and never in older composts. Proper composting may prevent long-term survival of E. coli and L. monocytogenes. These results suggest that like composted sewage sludge or manure, domestic waste composts may support pathogen survival. Survival was not related to the physicochemical characteristics of the composts.     

Interactive effects of elevated CO2, N deposition and climate change on extracellular enzyme activity and soil density fractionation in a California annual grassland

Elevated CO₂, N deposition and climate change can alter ecosystem‐level nutrient cycling both directly and indirectly. We explored the interactive effects of these environmental changes on extracellular enzyme activity and organic matter fractionation in soils of a California annual grassland. The activities of hydrolases (polysaccharide‐degrading enzymes and phosphatase) increased significantly in response to nitrate addition, which coincided with an increase in soluble C concentrations under ambient CO₂. Water addition and elevated CO₂ had negative but nonadditive effects on the activities of these enzymes. In contrast, water addition resulted in an increase in the activities of lignin‐degrading enzymes (phenol oxidase and peroxidase), and a decrease in the free light fraction (FLF) of soil organic matter. Independent of treatment effects, lignin content in the FLF was negatively correlated with the quantity of FLF across all samples. Lignin concentrations were lower in the aggregate‐occluded light fraction (OLF) than the FLF, and there was no correlation between percent lignin and OLF quantity, which was consistent with the protection of soil organic matter in aggregates. Elevated CO₂ decreased the quantity of OLF and increased the OLF lignin concentration, however, which is consistent with increased degradation resulting from increased turnover of soil aggregates. Overall, these results suggest that the effects of N addition on hydrolase activity are offset by the interactive effects of water addition and elevated CO₂, whereas water and elevated CO₂ may cause an increase in the breakdown of soil organic matter as a result of their effects on lignin‐degrading enzymes and soil aggregation, respectively.     

Bio-degradation of olive mill wastewater sludge by its co-composting with agricultural wastes

The use of maize straw (MS) or cotton waste (CW) as bulking agents in the composting of olive mill wastewater (OMW) sludge was compared by studying the organic matter (OM) mineralisation and humification processes during composting and the characteristics of the end products. Both composts were prepared in a pilot-plant using the Rutgers static-pile system. The use of CW instead of MS to compost OMW sludge extended both the thermophilic and bio-oxidative phases of the process, with higher degradation of polymers (mainly lignin and cellulose), a greater formation of nitrates, higher total nitrogen losses and a lower biological nitrogen fixation. The CW produced a compost with a more stabilised OM and more highly polymerised humic-like substances. In the pile with CW and OMW sludge, OM losses followed a first-order kinetic equation, due to OM degradation being greater at the beginning of the composting and remaining almost constant until the end of the process. However, in the pile with MS and OMW sludge this parameter followed a zero-order kinetic equation, since OM degraded throughout the process. The germination index indicated the reduction of phytotoxicity during composting.     

Comparative role of animal manure and vegetable waste induced compost for polluted soil restoration and maize growth

Soil amendment with two types of composts: animal manure (AC) and vegetable waste (VC) induced composts have potential to alleviate Cd toxicity to maize in contaminated soil. Therefore, Cd mobility in waste water irrigated soil can be addressed through eco-friendly and cost effective organic soil amendments AC and VC that eventually reduces its translocation from polluted soil to maize plant tissues. The comparative effectiveness of AC and VC at 3% rate were evaluated on Cd solubility, its accumulation in maize tissues, translocation from root to shoot, chlorophyll contents, plant biomass, yield and soil properties (pH, NPK, OM). Results revealed that the addition of organic soil amendments significantly minimized Cd mobility and leachability in soil by 58.6% and 47%, respectively in VC-amended soil over control. While, the reduction was observed by 61.7% and 57%, respectively when AC was added at 3% over control. Comparing the control soil, Cd uptake effectively reduced via plants shoots and roots by 50%, 46% respectively when VC was added in polluted soil. However, Cd uptake was decreased in maize shoot and roots by 58% and 52.4% in AC amended soil at 3% rate, respectively. Additionally, NPK contents were significantly improved in polluted soil as well as in plant tissues in both composts amended soil Comparative to control, the addition of composts significantly improved the maize dry biomass and chlorophyll contents at 3% rate. Thus, present study confirmed that the addition of animal manure derived compost (AC) at 3% rate performed well and might be consider the suitable approach relative to vegetable compost for maize growth in polluted soil.     

Methane production by treating vinasses from hydrous ethanol using a modified UASB reactor

Background

A modified laboratory-scale upflow anaerobic sludge blanket (UASB) reactor was used to obtain methane by treating hydrous ethanol vinasse. Vinasses or stillage are waste materials with high organic loads, and a complex composition resulting from the process of alcohol distillation. They must initially be treated with anaerobic processes due to their high organic loads. Vinasses can be considered multipurpose waste for energy recovery and once treated they can be used in agriculture without the risk of polluting soil, underground water or crops. In this sense, treatment of vinasse combines the elimination of organic waste with the formation of methane. Biogas is considered as a promising renewable energy source. The aim of this study was to determine the optimum organic loading rate for operating a modified UASB reactor to treat vinasse generated in the production of hydrous ethanol from sugar cane molasses.

Results

The study showed that chemical oxygen demand (COD) removal efficiency was 69% at an optimum organic loading rate (OLR) of 17.05 kg COD/m³-day, achieving a methane yield of 0.263 m³/kg COD_added and a biogas methane content of 84%. During this stage, effluent characterization presented lower values than the vinasse, except for potassium, sulfide and ammonia nitrogen. On the other hand, primers used to amplify the 16S-rDNA genes for the domains Archaea and Bacteria showed the presence of microorganisms which favor methane production at the optimum organic loading rate.

Conclusions

The modified UASB reactor proposed in this study provided a successful treatment of the vinasse obtained from hydrous ethanol production.Methanogen groups (Methanobacteriales and Methanosarcinales) detected by PCR during operational optimum OLR of the modified UASB reactor, favored methane production.

     

Biological testing of a digested sewage sludge and derived composts

Aiming to evaluate a possible loss of soil habitat function after amendment with organic wastes, a digested sewage sludge and derived composts produced with green residues, where biologically tested in the laboratory using soil animals (Eisenia andrei and Folsomia candida) and plants (Brassica rapa and Avena sativa). Each waste was tested mimicking a field application of 6ton/ha or 12ton/ha. Avoidance tests did not reveal any impact of sludge and composts to soil biota. Germination and growth tests showed that application of composts were beneficial for both plants. Composts did not affect earthworm's mass increase or reproduction, but the highest sludge amendment revealed negative effects on both parameters. Only the amendment of composts at the highest dose originated an impairment of springtails reproductive output. We suggest that bioassays using different test species may be an additional tool to evaluate effects of amendment of organic wastes in soil. Biological tests are sensitive to pollutants at low concentrations and to interactions undetected by routine chemical analysis.     

Chemical properties and hydrolytic enzyme activities for the characterisation of two-phase olive mill wastes composting

Two-phase olive mill waste (TPOMW) is a semisolid sludge generated during the extraction of olive oil by the two-phase centrifugation system. Among all the available disposal options, composting is gaining interest as a sustainable strategy to recycle TPOMW for agricultural purposes. The quality of compost for agronomical use depends on the degree of organic matter stabilization, but despite several studies on the topic, there is not a single method available which alone can give a certain indication of compost stability. In addition, information on the biological and biochemical properties, including the enzymatic activity (EA) of compost, is rare. The aim of this work was to investigate the suitability of some enzymatic activities (beta-glucosidase, arylsulphatase, acid-phosphatase, alkaline-phosphatase, urease and fluorescein diacetate hydrolysis (FDA)) as parameters to evaluate organic matter stability during the composting of TPOMW. These enzymatic indices were also compared to conventional stability indices. For this purpose two composting piles were prepared by mixing TPOMW with sheep manure and grape stalks in different proportions, with forced aeration and occasional turnings. The composting of TPOMW followed the common pattern reported previously for this kind of material with a reduction of 40-50% of organic matter, a gradual increase in pH, disappearance of phytotoxicity and formation of humic-like C. All EA increased during composting except acid-phosphatase. Significant correlations were found between EA and some important conventional stability indices indicating that EA can be a simple and reliable tool to determine the degree of stability of TPOMW composts.     

The effect of anthracene on total dry matter and extracellular enzyme analysis of a starch-amended composting process

Composting technology has been widely used as a cost-effective, eco-friendly, and efficient solid waste management option for the bioremediation of organic pollutants. Most studies have focused on the use of compost in the bioremediation of organic pollutants, without any attention being paid to the effect of the organic pollutants on the composting process. Therefore, in this study, the effect of an organic pollutant (anthracene) on a starch-amended composting process is reported. In order to determine the effect, the total dry matter and the extracellular enzyme analysis (EEA) of starch-specific (α-glucosidase) and -nonspecific (β-glucosidase) substrates were monitored. Over the course of the experiments, there appeared to be some form of anthracene effect on the progression in the total dry matter and the extracellular enzyme analysis (EEA) of the α-glucosidase, particularly in the starch and anthracene–amended composts. The interactions between the starch and the anthracene consistently increased the total dry matter and the α-glucosidase activity of the starch and anthracene–amended composts. This observation is novel, and the kind of interaction is yet unknown. Therefore, detailed investigation to understand the magnitude of such interaction is necessary to potentially resolve these issues.     

Application of COMPOCHIP Microarray to Investigate the Bacterial Communities of Different Composts

A microarray spotted with 369 different 16S rRNA gene probes specific to microorganisms involved in the degradation process of organic waste during composting was developed. The microarray was tested with pure cultures, and of the 30,258 individual probe-target hybridization reactions performed, there were only 188 false positive (0.62%) and 22 false negative signals (0.07%). Labeled target DNA was prepared by polymerase chain reaction amplification of 16S rRNA genes using a Cy5-labeled universal bacterial forward primer and a universal reverse primer. The COMPOCHIP microarray was applied to three different compost types (green compost, manure mix compost, and anaerobic digestate compost) of different maturity (2, 8, and 16 weeks), and differences in the microorganisms in the three compost types and maturity stages were observed. Multivariate analysis showed that the bacterial composition of the three composts was different at the beginning of the composting process and became more similar upon maturation. Certain probes (targeting Sphingobacterium, Actinomyces, Xylella/Xanthomonas/Stenotrophomonas, Microbacterium, Verrucomicrobia, Planctomycetes, Low G + C and Alphaproteobacteria) were more influential in discriminating between different composts. Results from denaturing gradient gel electrophoresis supported those of microarray analysis. This study showed that the COMPOCHIP array is a suitable tool to study bacterial communities in composts.