Assessing the impact of extreme flooding on survival in a southern European population of White-throated Dippers Cinclus cinclus

Capsule: There were only weak effects of winter flooding episodes on apparent annual survival of a White-throated Dipper breeding population in northern Iberia.

Aims: To test whether extreme winter flooding episodes affected survival in a breeding population of White-throated Dippers Cinclus cinclus.

Methods: Dippers were ringed during the breeding seasons of seven consecutive years on rivers in northern Iberia. Cormack–Jolly–Seber models were used to estimate apparent annual survival in relation to flooding during the winter periods.

Results: We obtained weak evidence for an effect of flooding during the winter on the surveyed population. Two of the six winters were characterized by having an exceptionally high discharge. Our models showed that survival in the subsequent breeding period tended to be lower, although models assuming constant survival were equally well supported.

Conclusion: Extreme flooding in winter may affect survival of some White-throated Dippers in northern Iberia, but its impact at the population level seems to be weak.     

Growth and decline of a penguin colony and the influence on nesting density and reproductive success

Colonial breeding is characteristic of seabirds but nesting at high density has both advantages and disadvantages and may reduce survival and fecundity. African penguins (Spheniscus demersus) initiated breeding at Robben Island, South Africa in 1983. The breeding population on the island increased in the late 1990s and early 2000s before decreasing rapidly until 2010. Before the number breeding peaked, local nest density in the areas where the colony was initiated plateaued, suggesting that preferred nests sites were mostly occupied, and the area used by breeding birds expanded. However, it did not contract again as the population decreased, so that nesting density varied substantially. Breeding success was related positively to the prey available to the breeding birds and negatively to local nest density, particularly during the chick-rearing period, suggesting a density-dependence operating through social interactions in the colony, possibly exacerbated by poor prey availability when the breeding population was large. Although nest density at Robben Island was not high, nesting burrows, which probably reduce the incidence of aggressive encounters in the colony, are scarce and our results suggest that habitat alteration has modified the strength of density-dependent relationships for African penguins. Gaining a better understanding of how density dependence affects fecundity and population growth rates in colonial breeders is important for informing conservation management of the African penguin and other threatened taxa.     

The impact of year-to-year changes in the weather on the dynamics of Daphnia in a thermally stratified lake

The factors influencing the seasonal dynamics of Daphnia in a thermally stratified lake (Esthwaite Water) are described and related to long-term changes in the weather. The Daphnia produced three cohorts in the year and the strength of the cohorts was determined by year-to-year variations in the physical characteristics of the lake and the abundance of edible algae. Food was most abundant in early summer when small, fast-growing flagellates were particularly common. In late summer, the phytoplankton community was dominated by large, inedible species but edible forms re-appeared when nutrients were entrained by wind mixing. Examples are presented to demonstrate the effect that year-to-year variations in the weather have on the growth of the phytoplankton and the dynamics of the Daphnia. In ‘good’ years, when the lake stratifies early and there are periods of episodic mixing in summer, there are two ‘pulses’ of edible algae and two strong cohorts of Daphnia. In ‘bad’ years when stratification is delayed and there is little episodic mixing, the growth of the edible algae is suppressed and the Daphnia produce two weak cohorts. The results are discussed in relation to the impact of intermediate disturbances on growth of phytoplankton and current theories of population regulation in Daphnia. The evidence suggests that the dynamics of the Daphnia in the lake are strongly influenced by seasonal variations in the mixing regime, the recycling of nutrients and the episodic growth of edible algae.     

Detecting the impact of oceano-climatic changes on marine ecosystems using a multivariate index: The case of the Bay of Biscay (North Atlantic-European Ocean)

Large‐scale univariate climate indices (such as NAO) are thought to outperform local weather variables in the explanation of trends in animal numbers but are not always suitable to describe regional scale patterns. We advocate the use of a Multivariate Oceanic and Climatic index (MOCI), derived from ‘synthetic’ and independent variables from a linear combination of the total initial variables objectively obtained from Principal Component Analysis. We test the efficacy of the index using long‐term data from marine animal populations. The study area is the southern half of the Bay of Biscay (43°–47°N; western Europe). Between 1974 and 2000 we monitored cetaceans and seabirds along 131000 standardized line transects from ships. Fish abundance was derived from commercial fishery landings. We used 44 initial variables describing the oceanic and atmospheric conditions and characterizing the four annual seasons in the Bay of Biscay. The first principal component of our MOCI is called the South Biscay Climate (SBC) index. The winter NAO index was correlated to this SBC index. Inter‐annual fluctuations for most seabird, cetacean and fish populations were significant. Boreal species (e.g. gadiformes fish species, European storm petrel and Razorbill …) with affinities to cold temperate waters declined significantly over time while two (Puffin and Killer Whale) totally disappeared from the area during the study period. Meridional species with affinities to hotter waters increased in population size. Those medium‐term demographic trends may reveal a regime shift for this part of the Atlantic Ocean. Most of the specific observed trends were highly correlated to the SBC index and not to the NAO. Between 40% and 60% of temporal variations in species abundance were explained by the multivariate SBC index suggesting that the whole marine ecosystem is strongly affected by a limited number of physical parameters revealed by the multivariate SBC index. Aside the statistical error of the field measurements, the remaining variation unexplained by the physical characteristics of the environment correspond to the impact of anthropogenic activities such overfishing and oil‐spills.     

Mesocosm experiment on the impact of invertebrate predation on zooplankton of a tropical lake

Invertebrate predation on zooplankton was investigated in mesocosms in the shallow tropical Lake Monte Alegre, São Paulo State, Brazil, in the summer of 1999. Two treatments were applied: one with natural densities of prey and the predators Chaoborus brasiliensis and the water mite Krendowskia sp. (Pr+), and another without predators (Pr-). Three enclosures (volume: 6.6 m³ of water per enclosure) per treatment were installed in the sediment of the deepest area of the lake (5.0 m). At the beginning, Chaoborus larvae were present in Pr- enclosures, because of technical difficulties in preventing their entrance, but they virtually disappeared in the course of the experiment. Water mites were almost absent in Pr- enclosures. Chaoborus predation negatively influenced the Daphnia gessneri population, but not the populations of the copepods Tropocyclops prasinus and Thermocyclops decipiens and the rotifers Keratella spp. Death rates of Daphnia were generally significantly higher in the Pr+ treatment; Daphnia densities increased after the disappearance of Chaoborus in Pr-. Copepod losses to predation in the experiment may be compensated by higher fecundity, shorter egg development time, and lower pressure on egg-bearing females, resulting in a lower susceptibility to Chaoborus predation. The predation impact of water mite on microcrustaceans and rotifers in the experiment was negligible.     

Assessing the impact of rumen microbial communities on methane emissions and production traits in Holstein cows in a tropical climate

The evaluation of how the gut microbiota affects both methane emissions and animal production is necessary in order to achieve methane mitigation without production losses. Toward this goal, the aim of this study was to correlate the rumen microbial communities (bacteria, archaea, and fungi) of high (HP), medium (MP), and low milk producing (LP), as well as dry (DC), Holstein dairy cows in an actual tropical production system with methane emissions and animal production traits. Overall, DC cows emitted more methane, followed by MP, HP and LP cows, although HP and LP cow emissions were similar. Using next-generation sequencing, it was found that bacteria affiliated with Christensenellaceae, Mogibacteriaceae, S24-7, Butyrivibrio, Schwartzia, and Treponema were negatively correlated with methane emissions and showed positive correlations with digestible dry matter intake (dDMI) and digestible organic matter intake (dOMI). Similar findings were observed for archaea in the genus Methanosphaera. The bacterial groups Coriobacteriaceae, RFP12, and Clostridium were negatively correlated with methane, but did not correlate with dDMI and dOMI. For anaerobic fungal communities, no significant correlations with methane or animal production traits were found. Based on these findings, it is suggested that manipulation of the abundances of these microbial taxa may be useful for modulating methane emissions without negatively affecting animal production.     

Source-sink dynamics within a plant population: the impact of substrate and herbivory on palm demography

Site factors have frequently been shown to affect survival, growth, and reproduction in plant populations. The source-sink concept proposed by Pulliam is one way of integrating this spatial demographic variation into population models. Source-sink models describe a population where propagules from “source” habitats sustain less productive “sink” areas. We adapted this concept to model the population dynamics of the understory palm Chamaedorea radicalis on two substrates, rock outcrops and forest floor. In our model, sources and sinks correspond to fine-scale demographic structure within the population, rather than spatially discrete subpopulations as described in the Pulliam model. We constructed a stage-structured population matrix model that integrates the site-specific demography of individuals across two habitats types that are linked by migration. We then parameterized this model with field data from C. radicalis. To address whether observed differences in palm demography between rock outcrops and the forest floor were due to natural variation between microsites or due to differences in browsing intensity from free range livestock, we parameterized separate models based on the substrate-specific demography of protected, non-browsed palms and of palms exposed to burro browse. Results showed that herbivory reduced survival and fecundity on the forest floor, which in the absence of seed migration resulted in a projected decline of forest floor palms (sinks). However with seed dispersal, palms persisted and total population growth (both substrates) was projected to be positive, indicating that seed dispersal from non-browsed palms on rock outcrops (sources) was sufficient to sustain C. radicalis on the forest floor.     

流域景观类型及配置对大型底栖动物完整性的影响

通过对滦河流域66个河段大型底栖动物采集和生境指标监测,基于大型底栖动物完整性评价和13种景观指数构建,探讨了不同景观指数对于大型底栖无脊椎动物完整性的解释能力。景观指数类型包括流域及欧式距离缓冲区土地利用百分比、水流路径缓冲区土地利用百分比、局部区域土地利用百分比和基于水流路径的反距离权重指数。基于多元线性逐步回归模型,根据调整R2(Square of the coefficient)来判断不同指数的解释能力。研究结果表明基于水流路径的反距离权重指数对于大型底栖动物完整性的解释能力最好,其次为基于水流路径的缓冲区和局部区域的土地利用百分比指数,全流域及欧氏距离缓冲区内土地利用百分比解释能力最差。农田是影响大型底栖动物完整性最重要的景观类型,距离河流越近的农田对大型底栖动物完整性的影响越大,因此流域及河岸带农田的控制和管理对于滦河流域大型底栖动物完整性的恢复具有重要的作用。     

Assessing the effects of land-use change on plant traits, communities and ecosystem functioning in grasslands: a standardized methodology and lessons from an application to 11 European sites

BACKGROUND AND AIMS: A standardized methodology to assess the impacts of land-use changes on vegetation and ecosystem functioning is presented. It assumes that species traits are central to these impacts, and is designed to be applicable in different historical, climatic contexts and local settings. Preliminary results are presented to show its applicability. METHODS: Eleven sites, representative of various types of land-use changes occurring in marginal agro-ecosystems across Europe and Israel, were selected. Climatic data were obtained at the site level; soil data, disturbance and nutrition indices were described at the plot level within sites. Sixteen traits describing plant stature, leaf characteristics and reproductive phase were recorded on the most abundant species of each treatment. These data were combined with species abundance to calculate trait values weighed by the abundance of species in the communities. The ecosystem properties selected were components of above-ground net primary productivity and decomposition of litter. KEY RESULTS: The wide variety of land-use systems that characterize marginal landscapes across Europe was reflected by the different disturbance indices, and were also reflected in soil and/or nutrient availability gradients. The trait toolkit allowed us to describe adequately the functional response of vegetation to land-use changes, but we suggest that some traits (vegetative plant height, stem dry matter content) should be omitted in studies involving mainly herbaceous species. Using the example of the relationship between leaf dry matter content and above-ground dead material, we demonstrate how the data collected may be used to analyse direct effects of climate and land use on ecosystem properties vs. indirect effects via changes in plant traits. CONCLUSIONS: This work shows the applicability of a set of protocols that can be widely applied to assess the impacts of global change drivers on species, communities and ecosystems.