Structural features and bioactivities of the chitosan

Fourier transform infrared (FT-IR) spectroscopic studies (3500-600 cm⁻¹) showed some different bands of chitosan. The absorption at 3439 cm⁻¹ is stretching vibration of -OH and -NH₂ bonds, indicating the association of the hydrogen-bond between them. The bands at 1659, 1599 and 1321 cm⁻¹ are attributable to the peaks of stretching vibrations of amide I (ν_(CO)), II (δ_(N-H)), and the peak of stretching and bending vibrations of III (ν_(C-N)) (δ_(N-H)). The chitosan showed strong free radical scavenging activities. Pretreatment with chitosan significantly prevented the decrease of antioxidant enzymes activities and the increase of p-JNK at 3 h after renal ischemia and reduced renal tubular epithelial cell apoptosis.     

Initial reaction dynamics of proteorhodopsin observed by femtosecond infrared and visible spectroscopy

We present a comparative study using femtosecond pump/probe spectroscopy in the visible and infrared of the early photodynamics of solubilized proteorhodopsin (green absorbing variant) in D₂O with deprotonated (pD 9.2) and protonated (pD 6.4) primary proton acceptor Asp-97. The vis-pump/vis-probe experiments show a kinetic isotope effect that is more pronounced for alkaline conditions, thus decreasing the previously reported pH-dependence of the primary reaction of proteorhodopsin in H₂O. This points to a pH dependent H-bonding network in the binding pocket of proteorhodopsin, that directly influences the primary photo-induced dynamics. The vis-pump/IR-probe experiments were carried out in two different spectral regions and allowed to monitor the retinal CC (1500 cm⁻¹-1580 cm⁻¹) and CN stretching vibration as well as the amide I mode of the protein (1590 cm⁻¹-1680 cm⁻¹). Like the FTIR spectra of the K intermediate (PR_K-PR difference spectra) in this spectral range, the kinetic parameters and also the quantum efficiency of photo-intermediate formation are found to be virtually independent of the pD value.     

Novel porphyrin-thallium-platinum complex with “naked” metal-metal bond: multinuclear NMR characterization of [(tpp)Tl-Pt(CN)5] and [(thpp)Tl-Pt(CN)5] in solution

The novel porphyrin-thallium-platinum complexes with “naked” metal-metal bond, with the composition [(tpp)Tl-Pt(CN)₅]²⁻ (1) and [(thpp)Tl-Pt(CN)₅]²⁻ (2) (tpp = tetraphenylporphrin and thpp = tetrakis(4-hydroxyphenyl)-porphine), were synthesized and characterised by multinuclear NMR (²⁰⁵Tl, ¹⁹⁵Pt, ¹³C and ¹H) and Raman spectroscopies in solution. The presence of a direct Pt-Tl metal-metal bond in the complexes is convincingly confirmed by a very strong one-bond ¹⁹⁵Pt-²⁰⁵Tl spin-spin coupling (47.8 and 48.3 kHz for 1 and 2, respectively) detected in both Pt and Tl NMR spectra. The corresponding force constant in molecule 1, 1.92 N cm⁻¹, was calculated using Raman stretching frequency of the Pt-Tl vibration and is characteristic for a single metal-metal bond.     

Characterization of hydroxyl groups of highly crystalline β-chitin under static tension detected by FT-IR

The different behavior of the OH groups of a highly crystalline β-chitin from Lamellibrachia sp. was revealed by FT-IR spectroscopy with static tension applied in the direction of the chain. Both OH groups shifted to higher wavenumbers under the tension, possibly because the force constant of the OH vibration intensified due to the erosion of hydrogen bonds, but the shift in the OH peak occurring at 3435 cm⁻¹ was 14% greater than that of the peak at 3470 cm⁻¹. The band at 3435 cm⁻¹ was assigned to O(3)H and that at 3470 cm⁻¹ to O(6)H, because the intramolecular hydrogen bond of O(3)H?O(5) occurs along the chitin chain's backbone and is likely to be more affected under tensile stress as a load carrier, than O(6)H?O(7)C, which is an intermolecular hydrogen bond located in a branch of the chain. Computation of an IR spectrum under stretching was conducted and supported the assignment of the two OH groups.     

Structure and magnetic properties of polynuclear copper(II) compounds with syn-anti carboxylato- and bromo-bridges

Synthesis, spectroscopic and magnetic properties, and X-ray crystal structures of two copper(II) polymers Cu(2-qic)Br (2-qic = quinoline-2-carboxylate) (1) and Cu(2-pic)Br (2-pic = pyridine-2-carboxylate) (2) are described. These compounds are isostructural with Cu(2-qic)Cl and Cu(2-pic)Cl, respectively, the X-ray crystal structures of which were reported recently. Both complexes are polynuclear copper(II) compounds (1D and 2D, respectively) based on syn-anti carboxylate bridges and additionally on linear monobromo- (in 1) and dibromo-bridging (in 2) motifs. The magnetic properties were investigated in the temperature range 1.8-300 K. They reveal the occurrence of strong antiferromagnetic coupling (J₁ = −102.5 cm⁻¹) through the single bromo-bridge in 1, which is much stronger than that transmitted by the single chloro-bridge (J = −57.0 cm⁻¹). Very weak ferromagnetic interaction through the syn-anti carboxylate bridge J₂ is expected as it was observed in isomorphous Cu(2-qic)Cl (J = 0.37 cm⁻¹). For 2 a weak ferromagnetic couplings through the syn-anti carboxylate (zJ′ = 1.35 cm⁻¹) and dibromo-bridges (J = 8.31 cm⁻¹) were found. The experimental results indicate that the observed ferromagnetic exchange through dibromo-bridge is weaker than that in the chloride analog (J = 15.0 cm⁻¹). The magnitude of magnetic interactions is discussed on the basis of structural data of compounds 1 and 2 and their halide analogues.     

Evidence for light-induced 13-cis, 14-s-cis isomerization in bacteriorhodopsin obtained by FTIR difference spectroscopy using isotopically labelled retinals

We have obtained by Fourier transformed infra-red (FTIR)-spectroscopy BR-K, BR-L and BR-M difference spectra of bacteriorhodopsin regenerated with isotopically labelled retinals. Thereby, we are able to assign reliably the C₁₄–C₁₅ and C=N stretching vibrations of the various intermediates. The lower C₁₄–C₁₅ stretching vibration frequency in L as compared with 13-cis protonated Schiff base model compounds indicates a 13-cis, 14-s-cis configuration of the retinal in this species. The unusually low C=N stretching vibration in K at 1615 cm⁻¹ indicates less stabilization of the positive charge at the Schiff base by the protein environment. Based on these results, a mechanism is suggested by which the stored light energy is transformed into proton transfers.     

Balance between ultrafast parallel reactions in the green fluorescent protein has a structural origin

The fluorescence photocycle of the green fluorescent protein is functionally dependent on the specific structural protein environment. A direct relationship between equilibrium protein side-chain conformation of glutamate 222 and reactivity is established, particularly the rate of ultrafast proton transfer reactions in the fluorescence photocycle. We show that parallel transformations in the photocycle have a structural origin, and we report on the vibrational properties of responsive amino acids on an ultrafast timescale. Blue excitation of GFP drives two parallel, excited-state deuteron transfer reactions with 10 ps and 75 ps time constants to the buried carboxylic acid side chain of glutamate 222 via a hydrogen-bonding network. Assignment of 1456 cm⁻¹ and 1441 cm⁻¹ modes to ν_sym and assignment of 1564 cm⁻¹ and 1570 cm⁻¹ features to ν_asym of E222 in the 10 ps and 75 ps components, respectively, was possible from the analysis of the transient absorption data of an E222D mutant and was consistent with photoselection measurements. In contrast to the wild-type, measurements of E222D can be described with only one difference spectrum, with the ν_sym mode at 1435 cm⁻¹ and the ν_asym mode at 1567 cm⁻¹, also correlating a large Δν_asym-sym with slow excited-state proton transfer kinetics. Density Functional Theory calculations and published model compound and theoretical studies relate differences in Δν_asym-sym to the strength and number of hydrogen-bonding interactions that are detected via equilibrium geometry and COO⁻ stretching frequency differences of the carboxylate. The correlation of photocycle kinetics with side-chain conformation of the acceptor suggests that proton transfer from S205 to E222 controls the rate of the overall excited-state proton transfer process, which is consistent with recent theoretical predictions. Photoselection measurements show agreement for localized CO vibrations of chromophore, Q69, and E222 with Density Functional Theory and ab initio calculations placed in the x-ray geometry and provide their vibrational response in the intermediates in the photocycle.     

Effect of high external pressures on the vibrational spectra of crystalline dichloro(1,5-cycloctadiene)platinum(II), Pt(η-C8H12)Cl2

The effects of high external pressures on the principal IR and Raman bands of crystalline dichloro(1,5-cycloctadiene)platinum(II), Pt(COD)Cl₂ (COD = η⁴-C₈H₁₂), have been investigated for pressures up to ∼30 kbar by diamond-anvil cell microspectroscopy. This square-planar Pt(II) complex does not undergo any pressure-induced structural change throughout the pressure range investigated and the pressure dependences (dν/dP) for the vibrational modes range from −0.18 to 0.79 cm⁻¹ kbar⁻¹. The negative dν/dP value observed for the IR band at 1426 cm⁻¹ (−0.18 cm⁻¹ kbar⁻¹) suggests that this band is chiefly associated with a CC stretching mode of the Pt-COD group. This observation provides yet another indication that high-pressure vibrational spectroscopy may indeed be a general method for establishing the presence of π-backbonding in organometallic complexes, such as metal carbonyls and alkenes.     

Ni(II) coordination compounds based on mixed phthalate and aromatic amine ligands: synthesis, crystal structures and magnetic properties

Three new coordination compounds, [Ni(Pht)(Py)₂(H₂O)₃] (1), [Ni(Pht)(β- Pic)₂(H₂O)₃] · H₂O (2) and [Ni(Pht)(1-MeIm)₂(H₂O)₃] (3) (where Pht²⁻ = dianion of o-phthalic acid; Py = pyridine, β-Pic = 3-methylpyridine, 1-MeIm = 1-methylimidazole), have been synthesized and characterized by IR spectroscopy and thermogravimetric analysis. Crystallographic studies 1-3 reveal that each Ni(II) center has a distorted octahedral geometry being coordinated by two nitrogen atoms of aromatic amines, one oxygen atom from a carboxylate group of a phthalate ligand and three water molecules. Pht²⁻ anions act as monodentate ligands, while the remaining uncoordinated carboxylate oxygen atoms participate in the formation of hydrogen bonding. The uncoordinated oxygen atoms form hydrogen bonds with the coordinated water molecules from adjacent complexes creating a centrosymmetric dimer unit. Further, these dimer units are connected by O-H?O hydrogen bonds in double-chains. Depending on the nature of aromatic amines, the arrangement of these double-chains differs. The double-chains are held together only by van der Waals interactions in 1. In contrast, in 2 these chains form layers by π-π interactions between antiparallel molecules of β-Pic as well as by π-π interactions between β-Pic and Pht aromatic rings. In complex 3, the double-chains are knitted together via C-H?O hydrogen bonds between the methyl group of 1-MeIm and the coordinated carboxylate oxygen atom of Pht, as well as π-π contacts involving antiparallel 1-MeIm cycles. The thermal dependence of the magnetic susceptibilities for compounds 1 and 2 shows a weak antiferromagnetic interaction between the two Ni²⁺ ions of the hydrogen bonded dimers. For compound 3, a ferromagnetic interaction could be observed. Modeling the experimental data with MAGPACK resulted in: g = 2.22, |D| = 4.11 cm⁻¹ and J = −0.29 cm⁻¹ for compound 1, g = 2.215, |D| = 3.85 cm⁻¹ and J = −0.1 cm⁻¹ for compound 2 and g = 2.23, |D| = 4.6 cm⁻¹ and J = 0.22 cm⁻¹ for compound 3.     

FT-IR Microspectroscopy of Rat Ear Cartilage

Rat ear cartilage was studied using Fourier transform-infrared (FT-IR) microspectroscopy to expand the current knowledge which has been established for relatively more complex cartilage types. Comparison of the FT-IR spectra of the ear cartilage extracellular matrix (ECM) with published data on articular cartilage, collagen II and 4-chondroitin-sulfate standards, as well as of collagen type I-containing dermal collagen bundles (CBs) with collagen type II, was performed. Ear cartilage ECM glycosaminoglycans (GAGs) were revealed histochemically and as a reduction in ECM FT-IR spectral band heights (1140–820 cm^-1) after testicular hyaluronidase digestion. Although ear cartilage is less complex than articular cartilage, it contains ECM components with a macromolecular orientation as revealed using polarization microscopy. Collagen type II and GAGs, which play a structural role in the stereo-arrangement of the ear cartilage, contribute to its FT-IR spectrum. Similar to articular cartilage, ear cartilage showed that proteoglycans add a contribution to the collagen amide I spectral region, a finding that does not recommend this region for collagen type II quantification purposes. In contrast to articular cartilage, the symmetric stretching vibration of –SO₃^- groups at 1064 cm^-1 appeared under-represented in the FT-IR spectral profile of ear cartilage. Because the band corresponding to the asymmetric stretching vibration of –SO₃^- groups (1236–1225 cm^-1) overlapped with that of amide III bands, it is not recommended for evaluation of the –SO₃^- contribution to the FT-IR spectrum of the ear cartilage ECM. Instead, a peak (or shoulder) at 1027–1016 cm^-1 could be better considered for this intent. Amide I/amide II ratios as calculated here and data from the literature suggest that protein complexes of the ear cartilage ECM are arranged with a lower helical conformation compared to pure collagen II. The present results could motivate further studies on this tissue under pathological or experimental states involving ear cartilage.     

Studies on photosynthetic oxygen-evolving complex by means of Fourier transform infrared spectroscopy: calcium and chloride cofactors

Structural roles of functional Ca²⁺ and Cl⁻ ions in photosynthetic oxygen-evolving complexes (OEC) were studied using low- (640–350 cm⁻¹) and mid- (1800–1200 cm⁻¹) frequency S₂/S₁ Fourier transform infrared (FTIR) difference spectroscopy. Studies using highly active Photosystem (PS) II core particles from spinach enabled the detection of subtle spectral changes. Ca²⁺-depleted and Ca²⁺-reconstituted particles produced very similar mid- and low-frequency spectra. The mid-frequency spectrum was not affected by reconstitution with ⁴⁴Ca isotope. In contrast, Sr²⁺-substituted particles showed unique spectral changes in the low-frequency Mn–O–Mn mode at 606 cm⁻¹ as well as in the mid-frequency carboxylate stretching modes. The mid-frequency spectrum of Cl⁻-depleted OEC exhibited marked changes in the carboxylate stretching modes and the suppression of protein modes compared with that of Cl⁻-reconstituted OEC. However, Cl⁻-depletion did not exert significant effects on the low-frequency spectrum.     

Resonance Raman spectroscopy of chemically modified retinals: Assigning the carbon-methyl vibrations in the resonance Raman spectrum of rhodopsin

To assign the observed vibrationsl modes in the resonance Raman spectrum of the retinylidene chromophore of rhodopsin, we have studied chemically modified retinals. The series of analogs investigated are the n-butyl retinals substituted at C₉ and C₁₃. The results obtained for the 11-cis isomer have clearly assigned the CCH₃ vibrational frequencies observed in the spectrum of the retinylidene chromophore. The data show that the C₍₉₎CH₃ stretching vibration can be assigned to the vibrational mode observed in the 1017 cm^?1 region, and the vibration detected at 997 cm^?1 can be assigned to the C₍₁₃CH₃ vibration. The C₍₅₎CH₃ stretching mode does not contribute to the vibrations observed in this region. The splitting in the C_(n)CH₃ (n = 9, 13) vibration is characteristic of the 11-cis conformation. The results on the modified retinals do not support the hypothesis that the splitting arises from equilibrium mixtures of 11-cis, 12-s-cis and 11-cis, 12-s-trans in solution. Thus, this splitting cannot be used to determine whether the chromophore in rhodopsin is in a 12-s-cis or 12-s-trans conformation. However, our results demonstrate that there are other vibrational modes in the spectra which are sensitive to this conformational equilibrium and we use the presence of a strong ~ 1271 cm^?1 mode in bovine and squid rhodopsin spectra as an indication that the chromophore in these pigments is 11-cis, 12-s-trans.     

Synthesis, structure and magnetic studies of two-dimensional network of Cu(II) polymer using malonate and 4,4′-azobispyridine ligands

The malonato-bridged copper(II) complex [Cu(mal)(H₂O)(azpy)_1/2] · H₂O (1) (mal = malonate, azpy = 4,4′-azobispyridine) has been synthesized and characterized by X-ray diffraction. The structure of 1 consists of malonato-bridged uniform copper(II) chains which are covalent connected through azpy to form two-dimensional wavelike network. The magnetic pathway of complex 1 is through a single syn-anti carboxylate bridge connecting equatorial and equatorial positions of adjacent copper(II) atoms, and have the value of the intrachain ferromagnetic coupling (J = 8.73(3) cm⁻¹) and interchain antiferromagnetic coupling (zJ′ = − 1.31(1) cm⁻¹) through a numerical expression for a ferromagnetic uniform chain.     

Raman Spectroscopy Analysis of Botryococcene Hydrocarbons from the Green Microalga Botryococcus braunii

Botryococcus braunii, B race is a unique green microalga that produces large amounts of liquid hydrocarbons known as botryococcenes that can be used as a fuel for internal combustion engines. The simplest botryococcene (C₃₀) is metabolized by methylation to give intermediates of C₃₁, C₃₂, C₃₃, and C₃₄, with C₃₄ being the predominant botryococcene in some strains. In the present work we have used Raman spectroscopy to characterize the structure of botryococcenes in an attempt to identify and localize botryococcenes within B. braunii cells. The spectral region from 1600–1700 cm⁻¹ showed ν(C=C) stretching bands specific for botryococcenes. Distinct botryococcene Raman bands at 1640 and 1647 cm⁻¹ were assigned to the stretching of the C=C bond in the botryococcene branch and the exomethylene C=C bonds produced by the methylations, respectively. A Raman band at 1670 cm⁻¹ was assigned to the backbone C=C bond stretching. Density function theory calculations were used to determine the Raman spectra of all botryococcenes to compare computed theoretical values with those observed. The analysis showed that the ν(C=C) stretching bands at 1647 and 1670 cm⁻¹ are actually composed of several closely spaced bands arising from the six individual C=C bonds in the molecule. We also used confocal Raman microspectroscopy to map the presence and location of methylated botryococcenes within a colony of B. braunii cells based on the methylation-specific 1647 cm⁻¹ botryococcene Raman shift.     

Pressure-tuning infrared and Raman spectra of trans-dichloro-bis[(diperfluoroethyl)phenylphosphine]platinum(II), trans-Pt[PPh(CF3CF2)2]2Cl2

Infrared and Raman spectra of solid trans-dichloro-bis[diperfluoroethyl(phenyl)phosphine]platinum(II), trans-Pt[PPh(CF₃CF₂)₂]₂Cl₂, have been studied at high external pressures up to ∼50 kbar with the aid of a diamond-anvil cell. A gradual, pressure-induced phase transition, most probably second order, was observed in the 21-34 kbar pressure range. In the IR spectra, the bands assigned to the CF stretching modes of the CF₃ groups exhibit larger pressure sensitivities than do those associated with the CF stretching modes of the CF₂ groups, most probably because of their physical location on the outside in the molecules in the unit cell. The fairly high pressure sensitivities of the symmetric PtCl stretching mode in both the low and high pressure phases (0.46 and 37 cm⁻¹/kbar, respectively) are considered to reflect the low force constant associated with the long PtCl bond length thus making this vibration more susceptible to compression.     

Mechanism of the binding of Z-L-tryptophan and Z-L-phenylalanine to thermolysin and stromelysin-1 in aqueous solutions

The chemical shift of the carboxylate carbon of Z-tryptophan is increased from 179.85 to 182.82 ppm and 182.87 ppm on binding to thermolysin and stromelysin-1 respectively. The chemical shift of Z-phenylalanine is also increased from 179.5 ppm to 182.9 ppm on binding to thermolysin. From pH studies we conclude that the pK_a of the inhibitor carboxylate group is lowered by at least 1.5 pK_a units when it binds to either enzyme. The signal at ~ 183 ppm is no longer observed when the active site zinc atom of thermolysin or stromelysin-1 is replaced by cobalt. We estimate that the distance of the carboxylate carbon of Z-[1-¹³C]-L-tryptophan is ≤ 3.71 Å from the active site cobalt atom of thermolysin. We conclude that the side chain of Z-[1-¹³C]-L-tryptophan is not bound in the S₂′ subsite of thermolysin. As the chemical shifts of the carboxylate carbons of the bound inhibitors are all ~ 183 ppm we conclude that they are all bound in a similar way most probably with the inhibitor carboxylate group directly coordinated to the active site zinc atom. Our spectrophotometric results confirm that the active site zinc atom is tetrahedrally coordinated when the inhibitors Z-tryptophan or Z-phenylalanine are bound to thermolysin.     

Ferromagnetic coupling by the spin-polarization mechanism in a trinuclear V triplesalen complex

The first trinuclear vanadium complex [(talen^t-Bu₂)(V^IVO)₃] (1) of a triple tetradentate triplesalen ligand has been synthesized and characterized. The triplesalen ligand (talen^t-Bu₂)^6- provides three salen-like coordination environments bridged in a meta-phenylene arrangement by a phloroglucinol backbone. In the electronic absorption spectrum of 1 all four ligand field transitions are detected below 21 400 cm⁻¹. The region above 23 000 cm⁻¹ is dominated by strong absorption from imine π → π^∗ and ligand-to-ligand CT transitions. The latter may also be described by a combined phenolate-to-vanadium LMCT and vanadium-to-imine MLCT through the empty metal d orbitals in a push-pull type interaction. The temperature-dependent magnetic susceptibility measurements reveal a ferromagnetic coupling of the three V^IVO units in the triplesalen complex with J = +0.44 cm⁻¹. The correlation of the electronic structure to the weakness of the ferromagnetic coupling by the spin-polarization mechanism in the trinuclear VO system is discussed.     

Non-covalent interactions in blue copper protein probed by Met16 mutation and electronic and resonance Raman spectroscopy of Achromobacter cycloclastes pseudoazurin

We have used low-temperature (77 K) resonance Raman (RR) spectroscopy as a probe of the electronic and molecular structure to investigate weak π-π interactions between the metal ion-coordinated His imidazoles and aromatic side chains in the second coordination sphere of blue copper proteins. For this purpose, the RR spectra of Met16 mutants of Achromobacter cycloclastes pseudoazurin (AcPAz) with aromatic (Met16Tyr, Met16Trp, and Met16Phe) and aliphatic (Met16Ala, Met16Val, Met16Leu, and Met16Ile) amino acid side chains have been obtained and analyzed over the 100-500 cm⁻¹ spectral region. Subtle strengthening of the Cu(II)-S(Cys) interaction on replacing Met16 with Tyr, Trp, and Phe is indicated by the upshifted (0.3-0.8 cm⁻¹) RR bands involving ν(Cu-S)_Cys stretching modes. In contrast, the RR spectra of Met16 mutants with aliphatic amino acids revealed larger (0.2-1.8 cm⁻¹) shifts of the ν(Cu-S)_Cys stretching modes to a lower frequency region, which indicate a weakening of the Cu(II)-S(Cys) bond. Comparisons of the predominantly ν(Cu-S)_Cys stretching RR peaks of the Met16X = Tyr, Trp, and Phe variants, with the molar absorptivity ratio ε₁/ε₂ of σ(∼455 nm)/π(∼595 nm) (Cys)S → Cu(II) charge-transfer bands in the optical spectrum and the axial/rhombic EPR signals, revealed a slightly more trigonal disposition of ligands about the copper(II) ion. In contrast, the RR spectra of Met16Z = Ala, Val, Leu, and Ile variants with aliphatic amino acid side chains show a more tetrahedral perturbation of the copper active site, as judged by the lower frequencies of the ν(Cu-S)_Cys stretching modes, much larger values of the ε₁/ε₂ ratio, and the increased rhombicity of the EPR spectra.     

Synthesis, crystal structure and magnetic properties of quasi-linear tetranuclear copper(II) Schiff base complexes formed by covalent linkage of asymmetrically dibridged dicopper(II) units

Alkoxo-phenoxo bridged tetranuclear copper(II) complexes [Cu₄L₂(O₂CC₆H₄-p-OH)₂] (1) and [Cu₄L₂(O₂CC₆H₄-o-OH)₂] (2) containing pentadentate Schiff base ligand N,N^′-(2-hydroxypropane-1,3-diyl)bis(salicylaldimine) (H₃L) are prepared and structurally characterized. Crystal structures of the complexes show the covalent linkage between two {Cu₂L(O₂CR)}(R = C₆H₄-p-OH, C₆H₄-o-OH) units through the phenoxo atoms of the Schiff base ligand showing axial/equatorial bonding modes. The Cu(1)-O(2)-Cu(2) alkoxo bridge angle is 131° in 1 and 2. The pendant ortho- and para- OH groups of the three-atom bridging carboxylate ligands show no apparent bonding interactions with the metal or other group(s). The complexes show a d-d band near 635 nm in CH₂Cl₂. Variable temperature magnetic susceptibility measurements in the temperature range 300-18 K show antiferromagnetically coupled spin system. A theoretical fit of the magnetic data using exchange parameters J₁ and J₂ for the intradimer and interdimer units of the quasi-linear tetrameric core gave values as: J₁=−132,J₂=−72 cm⁻¹ for 1 and J₁=−167,J₂=−67 cm⁻¹ for 2.     

Drastic changes in the ligand structure of the oxygen-evolving Mn cluster upon Ca depletion as revealed by FTIR difference spectroscopy

A Fourier transform infrared (FTIR) difference spectrum of the oxygen-evolving Mn cluster upon the S₁-to-S₂ transition was obtained with Ca²⁺-depleted photosystem II (PSII) membranes to investigate the structural relevance of Ca²⁺ to the Mn cluster. Previously, Noguchi et al. [Biochim. Biophys. Acta 1228 (1995) 189] observed drastic changes in the carboxylate stretching region of the S₂/S₁ FTIR spectrum upon Ca²⁺ depletion, whereas Kimura and co-workers [Biochemistry 40 (2001) 14061; ibid. 41 (2002) 5844] later claimed that these changes were not ascribed to Ca²⁺ depletion itself but caused by the interaction of EDTA to the Mn cluster and/or binding of K⁺ at the Ca²⁺ site. In the present study, the preparation of the Ca²⁺-depleted PSII sample and its FTIR measurement were performed in the absence of EDTA and K⁺. The obtained S₂/S₁ spectrum exhibited the loss of carboxylate bands at 1587/1562 and 1364/1403 cm^− 1 and diminished amide I intensities, which were identical to the previous observations in the presence of EDTA and K⁺. This result indicates that the drastic FTIR changes are a pure effect of Ca²⁺ depletion, and provides solid evidence for the general view that Ca²⁺ is strongly coupled with the Mn cluster.