木本植物导管长度分布规律研究新方法

从理论上推导出以着色导管数计算导管长度的关系式,为注入颜料法测定植物导管长度分布规律了理论基础,并推导了导管长度分布规律,以及着色导管数与样品长度关系。以香梓、梧桐为试材,研究了导管长主工分布规律,实验结果与理论结果完全一致,表明理论推导和实验结果是可靠的。     

Theoretical and experimental yields for photoautotrophic, mixotrophic, and photoheterotrophic growth

Available electron methods are presented and used to estimate theoretical energetic growth yields for photoautotrophic, mixotrophic, and photoheterotrophic growth of algae and photosynthetic bacteria. The theoretical yields are compared to experimental values reported previously. For photoautotrophic and mixotrophic growth of algae experimental values that approach and even exceed the theoretical values have been reported in the literature. For photosynthetic bacteria experimental yields are much smaller than thetheoretical maximum values.     

陆地生态系统临界转换理论及其生态学机制研究进展

随着气候变化和人类活动对陆地生态系统双重扰动的不断加剧,越来越多的研究已经意识到生态系统结构和功能会发生难以预知的突变,并且恢复起来需要很长时间.开发判别典型生态系统临界转换的早期预警模型及理解其生态学机制成为生态学研究的热点.目前,基于跨越多个时空尺度的理论和实验研究,提出了多种预警陆地生态系统临界转换的理论框架和指...     

The methodology of the theory of self-organization in the development of concepts on the physiological mechanisms of vestibular reactions

Sources of modern vestibulology's crisis status are determined. New methodological questions of object exploration of vestibular function and vestibular reactions are marked. New theoretical views are developed, some results of these theoretical views's practical realization are presented, perspective possibilities of new approach are defined.     

The strategy concept and John Maynard Smith’s influence on theoretical biology

Here we argue that the concept of strategies, as it was introduced into biology by John Maynard Smith, is a prime illustration of the four dimensions of theoretical biology in the post-genomic era. These four dimensions are: data analysis and management, mathematical and computational model building and simulation, concept formation and analysis, and theory integration. We argue that all four dimensions of theoretical biology are crucial to future interactions between theoretical and empirical biologists as well as with philosophers of biology.     

酵母、大肠杆菌和枯草杆菌基因组中短ORF的分布与形成原因

用终止密码方法计算了酵母、大肠杆菌和枯草杆菌基因组中所有的第一类开阅读框架（记为理论ORF）,给出了理论ORF和已知ORF随长度的分布,发现长度大于150个氨基酸后,理论ORF与已知ORF分布基本趋于一致,小于150个氨基酸的理论ORF数目的对数随长度线性变化,并提出这些短ORF是随机产生的猜想;研究了组分约束下的随机DNA序列中ORF数目、ORF的长度与随机序列总长度和GC含量之间的关系,证明了本文猜想的正确性;给出了短的理论ORF中可能的编码序列所占比例的分布曲线,这对识别短的编码序列有参考价值。     

Numerical simulations of Raman spectra of guanine-cytosine Watson-Crick and protonated Hoogsteen base pairs

Large changes in the Raman spectra of calf thymus DNA are observed upon lowering the pH. In order to gain a better insight into these effects, several simulations of the Raman spectra of the guanine-cytosine (GC) Watson-Crick and Hoogsteen base pairs are performed. By comparing the Raman bands of GC base pairs in calf thymus DNA at high and low pH with the theoretical simulations of GC base pairs, it is found that the intensity changes in the theoretical bands located between 400 and 1000 cm(-1) are small compared to the experimental ones. The behavior of the cytosine band at 1257 cm(-1) upon lowering the pH is not reproduced in the GC theoretical spectra. The bands located above 1300 cm(-1) in the theoretical spectra display intensity changes that are similar to those found for GC base pairs in calf thymus DNA spectra.     

The generality of empirical and theoretical explanations of behavior

For theoretical explanations of data, parameter values estimated from a single dependent measure from one procedure are used to predict alternative dependent measures from many procedures. Theoretical explanations were compared to empirical explanations of data in which known functions and principles were used to fit only selected dependent measures. The comparison focused on the ability of theoretical and empirical explanations to generalize across samples of the data, across dependent measures of behavior, and across different procedures. Rat and human data from fixed-interval and peak procedures, in which principles (e.g., scalar timing) are well known, were described and fit by a theory with independent modules for perception, memory, and decision. The theoretical approach consisted of fitting closed-form equations of the theory to response rate gradients calculated from the data, simulating responses using parameter values previously estimated, and comparing theoretical predictions with dependent measures not used to estimate parameters. Although the empirical and theoretical explanations provided similar fits to the response rate gradients that generalized across samples and had the same number of parameters, only the theoretical explanation generalized across procedures and dependent measures.     

Energetic yields associated with hydrocarbon fermentations

Energetic yields associated with microbial growth on hydrocarbons are investigated and compared with values for other organic substrates. Both cell growth and extracellular product formation are investigated. Both carbon and energy limitations are considered in estimating theoretical yields. Carbon, available electron, and ATP balances are used in the theoretical analysis. The results indicate that the availability of carbon may limit growth and product formation.     

Conditions for a theoretical biology: is biology truly an autonomous science?

In a line of a previous paper, the conditions for a theoretical biology were discussed and it was pointed out that the primary condition is that biology is an autonomous science. This statement is connected to the problem of reductionism. A discussion of the autonomy of biology shows that reductionism cannot be maintained, although particularly in physiology often physics and mathematics are used. Development, organization and evolution of biological systems are typical areas of autonomous biological researches and of autonomous theoretical developments. A sort of reduction to history seems today a nonsensical attempt to reduce the area of free theoretical biological activity.     

Diverse ideas on the growth kinetics of disseminated cancer cells

Theoretical and empirical arguments are used to support the growth kinetics of disseminated tumors. Employing viable hypotheses, it is established that Gompertzian growth of disseminated cancer cells can be derived from a number of theoretical considerations. Empirical methods are used to validate and confirm the theoretical assertions with the use of available data.     

Complexity and evolution: What everybody knows

The consensus among evolutionists seems to be (and has been for at least a century) that the morphological complexity of organisms increases in evolution, although almost no empirical evidence for such a trend exists. Most studies of complexity have been theoretical, and the few empirical studies have not, with the exception of certain recent ones, been especially rigorous; reviews are presented of both the theoretical and empirical literature. The paucity of evidence raises the question of what sustains the consensus, and a number of suggestions are offered, including the possibility that certain cultural and/or perceptual biases are at work. In addition, a shift in emphasis from theoretical to empirical inquiry is recommended for the study of complexity, and guidelines for future empirical studies are proposed.     

Theoretical and experimental studies of the radiative properties of matter at high energy densities and their application to the problems of inertial confinement fusion

The paper presents the results of theoretical and experimental studies of the radiative properties of plasmas produced by heating and compression of various materials to high energy densities. The specific features of the theoretical plasma model known as the ion model, which is used to calculate the radiative characteristics of plasmas of complex chemical composition, are discussed. The theoretical approach based on this model is applied to the plasma produced during the explosion of the X-pinch wires. The theoretical estimate of the radiation efficiency is compared with the experimental data on the total energy yield from an X-pinch made of two different wires (NiCr and Alloy 188). The radiative characteristics of (C12 H16 O8) and (C8 H12 O6) plasmas are calculated for the temperature diagnostics of plasmas produced from porous targets employed in inertial confinement fusion experiments with the use of laser radiation and heavy-ion beams.     

Theoretical models for branch formation in plants

Various branch architectures are observed in living organisms including plants. Branch formation has traditionally been an area of interest in the field of developmental biology, and theoretical approaches are now commonly used to understand the complex mechanisms involved. In this review article, we provide an overview of theoretical approaches including mathematical models and computer simulations for studying plant branch formation. These approaches cover a wide range of topics. In particular, we focus on the importance of positional information in branch formation, which has been especially revealed by theoretical research in plants including computations of developmental processes.

     

蛋白质折叠机理的理论研究

简要综述了近年来蛋白质折叠机理的理论研究。首先回顾了蛋白质折叠理论的发展历程,然后对折叠中间体的研究现状作了较详细的介绍。同时,对折叠机理理论研究中的几种理论模型和模拟算法作了细致评述,分析了其现状和存在的问题。最后,总结和讨论了折叠机理理论研究的现存问题及研究热点,并展望了该领域研究的发展趋势。     

Theory and practice of clinical ethics support services: narrative and hermeneutical perspectives

In this paper we introduce narrative and hermeneutical perspectives to clinical ethics support services (CESS). We propose a threefold consideration of 'theory' and show how it is interwoven with 'practice' as we go along. First, we look at theory in its foundational role: in our case 'narrative ethics' and 'philosophical hermeneutics' provide a theoretical base for clinical ethics by focusing on human identities entangled in stories and on moral understanding as a dialogical process. Second, we consider the role of theoretical notions in helping practitioners to understand their situation in clinical ethics practice, by using notions like 'story', 'responsibility', or 'vulnerability' to make explicit and explain their practical experience. Such theoretical notions help us to interpret clinical situations from an ethical perspective and to foster moral awareness of practitioners. And, thirdly, we examine how new theoretical concepts are developed by interpreting practice, using practice to form and improve our ethical theory. In this paper, we discuss this threefold use of theory in clinical ethics support services by reflecting on our own theoretical assumptions, methodological steps and practical experiences as ethicists, and by providing examples from our daily work. In doing so, we illustrate that theory and practice are interwoven, as theoretical understanding is dependent upon practical experience, and vice-versa.     

Conversion of the energy of a high-current REB into electromagnetic wave energy

Results are presented from a theoretical investigation and quantitative analysis of the physical processes that govern the efficiency of a coaxial device aimed at converting the energy of a relativistic electron beam into the energy of a TEM wave (a wave in a circular cylindrical coaxial waveguide). The key diffractional problem is solved exactly using a simplified theoretical model, which makes it possible to understand the mechanisms for the formation of a TEM wave and determine how the beam parameters and the design parameters of the converter affect the relative fractions of the kinetic energy of a relativistic electron beam and the energy of its own magnetic and electric fields that are transferred into the energy of the TEM wave field. The results obtained are analyzed quantitatively, and prospects for further theoretical and experimental research in this area are outlined.     

Lipid,lipoprotein, and apolipoprotein models: past,present, and future

Mones Berman's untimely death on 12 August 1982 put an end to his work in the development of theoretical biology. Arguments are examined, and it is concluded that a formal theory of lipoprotein metabolism flourished and expanded under the guidance of Dr. Berman. Not many scientists in the field of biology spend a major portion of their energies on theoretical work xxx was outstanding because of his early decision to follow the theoretical path.