东濮凹陷沙河街组(古近纪)植物活动痕迹类型及其环境与层序地层学意义

植物活动痕迹即根迹,是层序地层学中识别低位期沉积的重要标志。东濮凹陷沙河街组(古近纪)根迹发育,形态各异,可分为A、B、C、D、E五种类型,分别被解释为五类次级沉积环境下的产物。其中A型根迹、B型根迹与河口湾沉积环境相关,前者见于河口湾陆方一侧的河口沙坝(bay head bar),后者则出现于海方一侧易受海浪冲蚀的盐碱凹地。已有资料证明,植物活动痕迹,结合动物活动痕迹和古生物学、沉积学研究,可为判别河口湾沉积环境、层序界面提供重要实据,从而在层序地层学研究和储层沉积环境探索中显示重要作用。     

Experimental taphonomy of giant sulphur bacteria: implications for the interpretation of the embryo-like Ediacaran Doushantuo fossils

The Ediacaran Doushantuo biota has yielded fossils interpreted as eukaryotic organisms, either animal embryos or eukaryotes basal or distantly related to Metazoa. However, the fossils have been interpreted alternatively as giant sulphur bacteria similar to the extant Thiomargarita. To test this hypothesis, living and decayed Thiomargarita were compared with Doushantuo fossils and experimental taphonomic pathways were compared with modern embryos. In the fossils, as in eukaryotic cells, subcellular structures are distributed throughout cell volume; in Thiomargarita, a central vacuole encompasses approximately 98 per cent cell volume. Key features of the fossils, including putative lipid vesicles and nuclei, complex envelope ornament, and ornate outer vesicles are incompatible with living and decay morphologies observed in Thiomargarita. Microbial taphonomy of Thiomargarita also differed from that of embryos. Embryo tissues can be consumed and replaced by bacteria, forming a replica composed of a three-dimensional biofilm, a stable fabric for potential fossilization. Vacuolated Thiomargarita cells collapse easily and do not provide an internal substrate for bacteria. The findings do not support the hypothesis that giant sulphur bacteria are an appropriate interpretative model for the embryo-like Doushantuo fossils. However, sulphur bacteria may have mediated fossil mineralization and may provide a potential bacterial analogue for other macroscopic Precambrian remains.     

川西昌台地区上三叠统勉戈组的双壳类Pergamidia-Halobia群落特征及古环境分析

川西昌台地区上三叠统勉戈组上部为一套直接覆盖在流纹质火山岩之上的板岩,该板岩富集双壳类化石。化石保存完整,以食悬浮物质的外栖足丝型双壳类动物为主．根据优势属和常见属可建立一群落,即Pergamidia—Halobia群落。以根隆剖面为例．该群落的发展可分为3个阶段：第一阶段,群落中只出现了Halobia和Parapergamidia两个属．具有个体较小、数量较少的特点;第二阶段．群落中出现了12个属,以底栖双壳类Pergamidia为优势分子．Halobia仍是常见属,该时期群落具有个体较大、数量较多的特点;第三阶段。该时期群落组成分子相对第二阶段发生衰退,只剩下3个属,其中Halobia是常见属。岩石地层特征表明,该化石群落所在层位的沉积环境为火山活动末期的较深水环境。地球化学特征表明化石群落所在层位的岩石具有热水沉积的特点：常量元素的三元投点落人热水区域内及其附近;锰的含量较高;微量元素Si／Ba比值均小于1;铅、锌、钡、铷等金属元素含量明显高于地壳含量。综合分析表明．流纹质火山活动后期的热水活动是导致Pergamidia-Halobia群落发展的外界因素。     

Small shelly fossils and trace fossils near the Precambrian-Cambrian boundary in the Yukon Territory, Canada

In the past an ‘explosion’ in diversity and abundance of small shelly fossils and of trace fossils has served to mark the base of the Cambrian. However, no evidence has been presented to prove that the ‘explosions’ of the two groups were synchronous. We describe small shelly fossils and trace fossils from the same phosphatic limestone beds that indicate that the two events were separate in time. The small shelly fossils are Anabarites trisulcatus, Hyolithellus cf. H. isiticus, Microcornus? sp., Protohertzina anabarica, P. unguliformis, P. sp. A, Pseudorthotheca sp. A, Rushtonia? sp. A, four types of tuberculate plates and one type of reticulate plate. These fossils represent a restricted, ‘pre-explosion’ fauna and are assigned to the Anabarites-Circotheca-Protohertzina Assemblage Zone, an uppermost Precambrian zone in the Meishucun Stage, Yunnan Province, China. A point at the top of this zone has received strong international endorsement for future designation as the base of the Cambrian. Associated with the small shelly fossils are the trace fossils Cruziana sp. A, Cruziana? sp. B, Rusophycus sp. A, Palaeophycus rubdark and arthropod scratch marks. If found in isolation, this trace fossil assemblage would be considered as post-Precambrian because it includes large, highly organized arthropod traces that are traditionally accepted as occurring above the trace fossil ‘explosion’. We therefore conclude that the trace fossil ‘explosion’ predates the small shelly fossil ‘explosion’. If the proposed location of the base of the Cambrian in Yunnan is accepted, the small shelly fossil ‘explosion’ concept and its relationship to the boundary would not be greatly modified. The trace fossil ‘explosion’, however, would no longer indicate the base of the Cambrian and the ranges of some trace fossils would be extended into the Precambrian.     

球形小壳化石在贵州金沙寒武系牛蹄塘组的首次发现

贵州金沙岩孔剖面的寒武系牛蹄塘组为跨阶地层,以镍钼矿层为分界面,其上部属于筇竹寺阶,下部为梅树村阶。近期,作者利用15%左右的醋酸浸泡金沙岩孔剖面牛蹄塘组底部(梅树村阶)的岩样,发现了以球形化石为主的单胞、多胞球形类小壳动物化石,包括Olivooides pearformis和其余两类未确定的球形化石。此次球形化石的发现不仅丰富了牛蹄塘生物群的生物面貌,而且为解译早期后生动物的起源和演化、胚胎生物学提供了化石资料。     

贵州盘县中三叠统混鱼龙类化石的初步研究

记述贵州省盘县新民乡羊圈村中三叠统关岭组上段的混鱼龙3种,其中有一新种:Mixosaurus mao-taiensis Young,1965,emend.nov.,Mixosaurus cornalianus(Bassani),1886和Mixosaurus yangjuanensis sp.nov.。与混鱼龙类化石同层产出的有真颌鱼类和龙鱼类化石,真颌鱼类的特征比意大利和瑞士边界地区安尼-拉丁期和拉丁期早期普罗山头组(Prosanto Formation)所产的始真颌鱼Eoeugnathus进步,混鱼龙新种也比意-瑞边界地区安尼-拉丁期过渡期的混鱼龙进步。因此,我们推测当前混鱼龙类化石的层位可能包括从下安尼阶上部到拉丁阶下部的一段地层,不是简单的一个化石层,此问题尚待进一步深入研究。     

甘肃临夏盆地的渐新世巨犀化石

描述了 2种巨犀化石 :霍尔果斯准噶尔巨犀 (Dzungariotheriumorgosense)和牙沟副巨犀(新种 ) (Paraceratheriumyagouensesp .nov.)。新种的主要特征是 :个体小 ;上颊齿齿冠高 ,有薄层白垩质覆盖 ;DP2～M1反前刺大 ,原尖后收缩沟明显 ,次尖有深的前收缩沟 ,中谷和后凹中常有附属小柱等。巨犀的演化历史可能比过去想象的更复杂。Indricotherium、Dzungariotherium和Paraceratherium为代表不同进化水平和支系的 3个属 ,不应合并为Paraceratherium一属。牙沟含巨犀化石层位的地质时代为晚渐新世。     

甘肃永昌早二叠世两种科达叶的微细构造及古大气CO_2浓度重建

角质层微细构造是鉴定植物属种的重要特征之一,近年来又在古气候恢复中得到广泛应用。从甘肃永昌下二叠统采获了角质层保存较好的两种科达叶化石,详细分析了表皮微细构造特征,并结合其外形特征进行了属种鉴定:其中一种鉴定为淮南科达(Cordaites huainanensis Chen),另建立了一新种,命名为永昌科达(Cordaites yongchangensis sp.nov.)。本文选取与化石标本的宏观形态和角质层微观形态较为相似的长叶竹柏(Podocarpus fleuryi Hickel)作为其现存最近对应种,初次尝试利用化石气孔特征重建了甘肃永昌早二叠世的古大气CO2浓度。     

Paleozoic Protein Fossils Illuminate the Evolution of Vertebrate Genomes and Transposable Elements

Genomes hold a treasure trove of protein fossils: Fragments of formerly protein-coding DNA, which mainly come from transposable elements (TEs) or host genes. These fossils reveal ancient evolution of TEs and genomes, and many fossils have been exapted to perform diverse functions important for the host’s fitness. However, old and highly degraded fossils are hard to identify, standard methods (e.g. BLAST) are not optimized for this task, and few Paleozoic protein fossils have been found. Here, a recently optimized method is used to find protein fossils in vertebrate genomes. It finds Paleozoic fossils predating the amphibian/amniote divergence from most major TE categories, including virus-related Polinton and Gypsy elements. It finds 10 fossils in the human genome (eight from TEs and two from host genes) that predate the last common ancestor of all jawed vertebrates, probably from the Ordovician period. It also finds types of transposon and retrotransposon not found in human before. These fossils have extreme sequence conservation, indicating exaptation: some have evidence of gene-regulatory function, and they tend to lie nearest to developmental genes. Some ancient fossils suggest “genome tectonics,” where two fragments of one TE have drifted apart by up to megabases, possibly explaining gene deserts and large introns. This paints a picture of great TE diversity in our aquatic ancestors, with patchy TE inheritance by later vertebrates, producing new genes and regulatory elements on the way. Host-gene fossils too have contributed anciently conserved DNA segments. This paves the way to further studies of ancient protein fossils.     

Phylogeny of extant and fossil Juglandaceae inferred from the integration of molecular and morphological data sets

It is widely acknowledged that integrating fossils into data sets of extant taxa is imperative for proper placement of fossils, resolution of relationships, and a better understanding of character evolution. The importance of this process has been further magnified because of the crucial role of fossils in dating divergence times. Outstanding issues remain, including appropriate methods to place fossils in phylogenetic trees, the importance of molecules versus morphology in these analyses, as well as the impact of potentially large amounts of missing data for fossil taxa. In this study we used the angiosperm clade Juglandaceae as a model for investigating methods of integrating fossils into a phylogenetic framework of extant taxa. The clade has a rich fossil record relative to low extant diversity, as well as a robust molecular phylogeny and morphological database for extant taxa. After combining fossil organ genera into composite and terminal taxa, our objectives were to (1) compare multiple methods for the integration of the fossils and extant taxa (including total evidence, molecular scaffolds, and molecular matrix representation with parsimony [MRP]); (2) explore the impact of missing data (incomplete taxa and characters) and the evidence for placing fossils on the topology; (3) simulate the phylogenetic effect of missing data by creating "artificial fossils"; and (4) place fossils and compare the impact of single and multiple fossil constraints in estimating the age of clades. Despite large and variable amounts of missing data, each of the methods provided reasonable placement of both fossils and simulated "artificial fossils" in the phylogeny previously inferred only from extant taxa. Our results clearly show that the amount of missing data in any given taxon is not by itself an operational guideline for excluding fossils from analysis. Three fossil taxa (Cruciptera simsonii, Paleoplatycarya wingii, and Platycarya americana) were placed within crown clades containing living taxa for which relationships previously had been suggested based on morphology, whereas Polyptera manningii, a mosaic taxon with equivocal affinities, was placed firmly as sister to two modern crown clades. The position of Paleooreomunnea stoneana was ambiguous with total evidence but conclusive with DNA scaffolds and MRP. There was less disturbance of relationships among extant taxa using a total evidence approach, and the DNA scaffold approach did not provide improved resolution or internal support for clades compared to total evidence, whereas weighted MRP retained comparable levels of support but lost crown clade resolution. Multiple internal minimum age constraints generally provided reasonable age estimates, but the use of single constraints provided by extinct genera tended to underestimate clade ages.     

Liaoxia Cao et S.Q. Wu (Gnetales): ephedroids from the Early Cretaceous Yixian Formation in Liaoning, northeastern China

Gnetalean compression-impression fossils are described from the Early Cretaceous Yixian Formation, Liaoning Province, north-eastern China, and assigned to six species of Liaoxia Cao et S.Q. Wu. The fossils have opposite-decussate phyllotaxis and cones comprising 2–12 pairs of bracts. Ovulate cones have seeds typically in a distal position. The species differ from each other and from previously described fossils in the absence or presence of leaves, shape of cones and seeds, and shape and position of cone bracts. The species of Liaoxia are probably close relatives of extant species of Ephedra L., but diagnostic reproductive details that could confirm this hypothesis are not preserved. The restricted information in the fossils and the poorly understood morphological diversity of extant Ephedra, prevent assignment of the fossils to any particular subgroup of Ephedra, as well as an explicit exclusion of them from the extant genus.     

Soft‐Bodied Fossils Are Not Simply Rotten Carcasses – Toward a Holistic Understanding of Exceptional Fossil Preservation

Exceptionally preserved fossils are the product of complex interplays of biological and geological processes including burial, autolysis and microbial decay, authigenic mineralization, diagenesis, metamorphism, and finally weathering and exhumation. Determining which tissues are preserved and how biases affect their preservation pathways is important for interpreting fossils in phylogenetic, ecological, and evolutionary frameworks. Although laboratory decay experiments reveal important aspects of fossilization, applying the results directly to the interpretation of exceptionally preserved fossils may overlook the impact of other key processes that remove or preserve morphological information. Investigations of fossils preserving non‐biomineralized tissues suggest that certain structures that are decay resistant (e.g., the notochord) are rarely preserved (even where carbonaceous components survive), and decay‐prone structures (e.g., nervous systems) can fossilize, albeit rarely. As we review here, decay resistance is an imperfect indicator of fossilization potential, and a suite of biological and geological processes account for the features preserved in exceptional fossils.     

On the eve of animal radiation: phylogeny, ecology and evolution of the Ediacara biota

Ediacara fossils document an important evolutionary episode just before the Cambrian explosion and hold critical information about the early evolution of macroscopic and complex multicellular life. They also represent an enduring controversy in paleontology. How are the Ediacara fossils related to living animals? How did they live? Do they share any evolutionary patterns with other life forms? Recent developments indicate that Ediacara fossils epitomize a phylogenetically diverse biosphere, probably including animals, protists, algae, fungi and others. Their simple ecology is dominated by epibenthic osmotrophs, deposit feeders and grazers, but few if any predators. Their evolution started with an early morphospace expansion followed by taxonomic diversification within confined morphospace, and concluded by extinction of many taxa at the Ediacaran-Cambrian boundary.     

甘肃华池马兰黄土中的哺乳动物化石

<正> 1985年10月,原华池县党校张文忠同志,在校址旁的柔远城子下挖窑洞时,于马兰黄土中发现一批化石,庆阳地区博物馆于同年11月组织了发掘.1986年1月,笔者同往华池,进一步观察了地层.鉴于我国北方马兰黄土中发现的化石很少,在此给予简要报道     

真菌化石研究进展

随着真菌化石被不断发现,利用化石中的真菌研究真菌类群的起源和进化历程逐渐成为真菌进化生物学研究的一个热点。真菌化石还是研究古生态中真菌与其他生物之间相互作用的重要材料,而这种相互作用既能用于研究古生物间的协同进化,也能成为判断古生态、古气候的重要依据。本文综述了国内外真菌化石的研究进展,旨在为更加系统准确地确定不同真菌类群的分化时间,重建真菌的系统发育树提供参考,同时也为研究生物间相互作用以及推断古生态环境提供帮助。     

The study of fossil spider species

The definition of what constitutes a species has been an area of contention in biology since before the time of Darwin. Here, we discuss concepts of species in regards to the Araneae and particularly focus on diagnosing fossils. Spiders are primarily diagnosed by their copulatory organs, which may be difficult to observe in fossils due to a number of confounding factors, thus potentially hindering identification and systematic classification. However, despite potential difficulties, fossils should and must be studied alongside extant Araneae in order to garner a full understanding of the evolutionary history of this megadiverse group.     

Footprints pull origin and diversification of dinosaur stem lineage deep into Early Triassic

The ascent of dinosaurs in the Triassic is an exemplary evolutionary radiation, but the earliest phase of dinosaur history remains poorly understood. Body fossils of close dinosaur relatives are rare, but indicate that the dinosaur stem lineage (Dinosauromorpha) originated by the latest Anisian (ca 242-244 Ma). Here, we report footprints from the Early-Middle Triassic of Poland, stratigraphically well constrained and identified using a conservative synapomorphy-based approach, which shifts the origin of the dinosaur stem lineage back to the Early Olenekian (ca 249-251 Ma), approximately 5-9 Myr earlier than indicated by body fossils, earlier than demonstrated by previous footprint records, and just a few million years after the Permian/Triassic mass extinction (252.3 Ma). Dinosauromorph tracks are rare in all Polish assemblages, suggesting that these animals were minor faunal components. The oldest tracks are quadrupedal, a morphology uncommon among the earliest dinosauromorph body fossils, but bipedality and moderately large body size had arisen by the Early Anisian (ca 246 Ma). Integrating trace fossils and body fossils demonstrates that the rise of dinosaurs was a drawn-out affair, perhaps initiated during recovery from the Permo-Triassic extinction.     

Assessing the quality of molecular divergence time estimates by fossil calibrations and fossil-based model selection

Estimates of species divergence times using DNA sequence data are playing an increasingly important role in studies of evolution, ecology and biogeography. Most work has centred on obtaining appropriate kinds of data and developing optimal estimation procedures, whereas somewhat less attention has focused on the calibration of divergences using fossils. Case studies with multiple fossil calibration points provide important opportunities to examine the divergence time estimation problem in new ways. We discuss two cross-validation procedures that address different aspects of inference in divergence time estimation. 'Fossil cross-validation' is a procedure used to identify the impact of different individual calibrations on overall estimation. This can identify fossils that have an exceptionally large error effect and may warrant further scrutiny. 'Fossil-based model cross-validation' is an entirely different procedure that uses fossils to identify the optimal model of molecular evolution in the context of rate smoothing or other inference methods. Both procedures were applied to two recent studies: an analysis of monocot angiosperms with eight fossil calibrations and an analysis of placental mammals with nine fossil calibrations. In each case, fossil calibrations could be ranked from most to least influential, and in one of the two studies, the fossils provided decisive evidence about the optimal molecular evolutionary model.     

河南登封寒武系第三统张夏组核形石与遗迹化石的耦合变化

河南登封关口剖面寒武系第三统张夏组下部碳酸盐岩中发育了大量的微生物成因的核形石和后生动物遗迹化石。在野外和显微镜下对核形石和遗迹化石进行观察,并统计它们在地层中所占比例,表明核形石和遗迹化石存在着耦合关系。下部地层以发育凝块石和形状不规则、纹层不连续、代表一种低能弱搅动水体的Ⅰ型核形石为主,不含遗迹化石,表明此时微生物在海洋生态系统中占主导地位。中部地层则以发育浑圆形、纹层连续的Ⅱ型核形石和遗迹化石Planolites为特征;而且随水体能量的增强,Planolites丰度逐渐升高,核形石丰度逐渐降低;二者的丰度变化说明后生动物的存在对核形石的数量有一定影响,但未破坏核形石的生长条件。上部地层发育大量Thalassinoides和生物扰动构造,缺乏核形石;后生动物对沉积基底进行反复扰动,彻底破坏了原始层理以及微生物造岩的环境,核形石消失。可见,在张夏组沉积时期,微生物与后生动物以及环境之间存在着特殊的相互作用关系。     

Adolescent archaics or adult moderns? Le Moustier 1 as a model for estimating the age at death of fragmentary supraorbital fossils in the modern human origins debate.

This study documents and examines selected implications of the adolescent supraorbital anatomy of the Le Moustier 1 Neandertal. Le Moustier's supraorbital morphology conforms to that expected of an adolescent Neandertal but indicates that significant development of the adult Neandertal torus occurs late in ontogeny. As the best preserved adolescent from the Late Pleistocene, Le Moustier 1's anatomy is used to help distinguish adolescent from adult anatomy in two cases of fragmentary supraorbital fossils, the Vindija late Neandertals and KRM 16425 from Klasies River Mouth (South Africa). It has been suggested that the modern-like aspects of the Vindija and Klasies supraorbital fossils are a function of developmental age rather than evolution. Although Le Moustier 1's anatomy does indicate that two of the Vindija fossils are adolescent; these two fossils have already been excluded from studies that demonstrate transitional aspects of the Vindija adult supraorbitals. Results of an analysis of KRM 16425 in light of Le Moustier 1 are more ambiguous. KRM 16425 is clearly not a Neandertal, but its morphology suggests that it may be an adolescent form of such late archaic Africans like Florisbad or Ngaloba. Both the Vindija and Klasies River Mouth cases highlight the need to be wary of confusing adolescent anatomy with modernity.