Computational screening of ZIFs for CO2 separations

Using molecular simulations, we studied a diverse collection of zeolite–imidazolate frameworks (ZIFs) to evaluate their performances in adsorption- and membrane-based gas separations. Molecular simulations were performed for both single-component gases (CH₄, CO₂, H₂ and N₂) and binary gas mixtures (CO₂/CH₄, CO₂/N₂, CO₂/H₂ and CH₄/H₂) to predict the intrinsic and mixture selectivities of ZIFs. These two selectivities were compared to discuss the importance of multi-component mixture effects on making predictions about the separation performance of a material. Gas separation performances of ZIFs were compared with other nanoporous materials and our results showed that several ZIFs can outperform well-known zeolites and metal–organic frameworks in CO₂ separations. Several other properties of ZIFs such as gas permeability, working capacity and sorbent selection parameter were computed to identify the most promising materials in adsorption- and membrane-based separation of CO₂/CH₄, CO₂/N₂, CO₂/H₂ and CH₄/H₂.     

Molecular simulation of CO2, N2 and CH4 adsorption and separation in ZIF-78 and ZIF-79

In this study, we investigated the adsorption and separation behaviours of CO₂, N₂ and CH₄ in ZIF-78 and ZIF-79 by means of grand canonical Monte Carlo methods. Our simulations indicate that preferential adsorption sites are mainly located at the regions where guest molecules can maximise interactions with the imidazolate (IM) linkers. The –NO₂ and –CH₃ functional groups are not the major binding sites that directly bind the guest molecules. Instead, they alter the electronic structure and polarity of the adjacent IM linkers to affect the adsorption behaviours. In addition, we found that the selectivity of CO₂ over N₂ or CH₄ is found to be dependent on the component fractions of CO₂/N₂ and CO₂/CH₄ mixtures. Specifically, the selectivity of CO₂ over N₂ increases with CO₂ composition fraction, while the trend for the selectivity of CO₂/CH₄ was opposite.     

Biogas upgrading using single-walled carbon nanotubes by molecular simulation

Abstract

Biogas from anaerobic digestion of biological wastes is a renewable energy resource that mainly contains CH₄, CO₂, trace amounts of H₂S and a fraction of H₂O vapour. In order to transfer biogas into biomethane to meet the standards for use as vehicle fuel or for injection in the natural gas grid, removing H₂S from biogas in advance is necessary. In addition, biogas is usually saturated with water vapour. It is significant to study the effect of the presence of H₂O on the biogas separation performance. Adsorption of H₂S/CO₂/CH₄ and H₂O/CO₂/CH₄ ternary mixtures using single-walled carbon nanotubes (SWCNT) were investigated via the Grand Canonical Monte Carlo (GCMC) method. We studied the effects of carbon nanotube diameter, –COOH modification, temperature and pressure on H₂S adsorption. The results indicate that the presence of hydrophilic –COOH groups does affect the separation of H₂S/CO₂/CH₄ mixtures. Temperature swing adsorption is more suitable than pressure swing adsorption for the separation of H₂S/CO₂/CH₄ mixtures. The effect of water vapour on the separation of CO₂/CH₄ was also investigated. The result shows that the presence of H₂O has little effect on the selectivity of CO₂/CH₄ in pristine CNT, but the selectivity of CO₂/CH₄ with the presence of H₂O is markedly enhanced after modification in –COOH modified SWCNT with specific modification degree. It is expected that this work could provide some useful information for biogas upgrading.     

Gas adsorption and diffusion in a highly CO2 selective metal–organic framework: molecular simulations

Grand canonical Monte Carlo and equilibrium molecular dynamics simulations were used to assess the performance of an rht-type metal–organic framework (MOF), Cu-TDPAT, in adsorption-based and membrane-based separation of CH₄/H₂, CO₂/CH₄ and CO₂/H₂ mixtures. Adsorption isotherms and self-diffusivities of pure gases and binary gas mixtures in Cu-TDPAT were computed using detailed molecular simulations. Several properties of Cu-TDPAT such as adsorption selectivity, working capacity, diffusion selectivity, gas permeability and permeation selectivity were computed and compared with well-known zeolites and MOFs. Results showed that Cu-TDPAT is a very promising adsorbent and membrane material especially for separation of CO₂ and it can outperform traditional zeolites and MOFs such as DDR, MFI, CuBTC, IRMOF-1 in adsorption-based CO₂/CH₄ and CO₂/H₂ separations.     

Evaluating adsorbed-phase activity coefficient models using a 2D-lattice model

Despite the wide use of the real adsorbed solution theory to predict multicomponent adsorption equilibrium, the models used for the adsorbed phase activity coefficients are usually borrowed from the gas–liquid phase equilibria. In this work, the accuracy of the Wilson and NRTL models for evaluating adsorbed phase activity coefficients is tested using a 2D-lattice model. An accurate model for adsorbed-phase activity coefficients should have no problem in fitting adsorption data obtained using this simple lattice model. The results, however, show that the commonly used Wilson and NRTL models cannot describe the adsorbed phase activity coefficients for slightly non-ideal to strong non-ideal mixtures. Therefore, until new models for adsorbed phase activity coefficients are developed, we should use existing models for liquids with care. In the second part of this work, the use of Monte Carlo simulations on a segregated 2D-lattice model, for predicting adsorption of mixtures is investigated. The segregated model assumes that the competition for adsorption occurs at isolated adsorption sites, and that the molecules from each adsorption site interact with the bulk phase independently. Two binary mixtures in two adsorbent materials were used as case studies for testing the predictions of the segregated 2D-lattice model: the binary system CO₂–N₂ in the hypothetical pure silica zeolite PCOD8200029, with isolated adsorption sites and normal preference for adsorption, and the binary system CO₂–C₃H₈ in pure silica mordenite (MOR), with isolated adsorption sites and inverse site preference. The segregated 2D-lattice model provides accurate predictions for the system CO₂–N₂ in PCOD8200029 but fails in predicting the adsorption behaviour of CO₂–C₃H₈ in pure silica MOR. The predictions of the segregated ideal adsorbed solution theory model are superior to those of the 2D-lattice model.     

Synthesis of hydrocarbons under presumed prebiotic conditions using high-frequency discharge

Summary Various hydrocarbons were synthesized by high-frequency discharge in a primordial terrestrial model atmosphere. The products were extracted by benzene or methanol and analyzed by GC-MS. The mean carbon chain length of the hydrocarbons formed by the discharge through pure CH₄ gas was less than 6. Benzene was also obtained. Some isomers were obtained for each of the hydrocarbons containing a given number of carbons. When a small amount of C₂H₂ was added to the CH₄, longer chain compounds were formed, as compared with discharge in CH₄ only. However, when the amount of C₂H₂ was increased, unextractable high molecular weight compounds were produced. The amounts of products decreased as the mixing ratio of CO₂ to CH₄ increased. No hydrocarbons were detected when the ratio of CO₂/CH₄ exceeded 1.     

Monte Carlo Simulation of Binary Gas Adsorption in Zeolite Cavities

Abstract

Grand canonical Monte Carlo simulations have been performed for binary adsorption of Lennard-Jones molecules with point multipole moments in zeolite cavities of type X. Fluid-solid electrostatic interactions were taken into account. Phase diagrams and total coverage were calculated for three binaries and compared with experimental measurements. MC simulations gave good agreement with experiment for two mixtures (C₂H₄-CO₂ and CO₂-CH₄) but there were discrepancies between simulation and experiment for the system i-C₄H₁₀-C₂H₄. The dependence of excess Gibbs free energy on the composition and pressure was studied. Negative deviations from ideality are due to energetic heterogeneity and size effects. Unlike liquid-vapor equilibrium, deviations from the Lorentz-Berthelot mixing rules for the adsorbates have little effect upon the phase behavior. Density distributions show that the components compete for the high energy sites inside the cavity; depending on its relative strength of adsorption, one component may be excluded from such positions (CH₄ in CO₂-CH₄), or the two species may share sites inside the cavity (C₂H₄-CO₂).     

Computer simulation of gas adsorption in modified COF-108: the impregnation of C60 into COF-108

Gas adsorption and separation performance of COF-108 framework impregnated by C₆₀ clusters were simulated. The adsorption properties of pure CO₂, the mixtures of CO₂/CH₄, CO₂/N₂ and N₂/O₂ were investigated. The simulated results of the adsorption isotherms, the adsorption quantity, the density fields, the isosteric heats and the selectivity in COF-108s were obtained. It is shown that the impregnation of C₆₀ can enhance the adsorption capacity of CO₂, N₂ and O₂, and the selectivity of CO₂/CH₄, CO₂/N₂ and N₂/O₂ in COF-108. The impregnation of C₆₀ can increase the surface area COF-108 but decrease its free volume and the pore diameter. At low adsorption pressures, the monolayer surface adsorption is dominant. With the increase in adsorption pressure, the dominant factor is changed into the free volume of COF-108 by the multilayer adsorption. The impregnation of C₆₀ plays different roles for the polar or non-polar gases at different pressures.     

Bifunctional chelates with mixed aromatic and aliphatic amine donors for labeling of biomolecules with the {Tc(CO)3} and {Re(CO)3} cores

A series of tridentate ligands consisting of mixed aromatic and aliphatic amine derivatives of single amino acid chelates and phenylpiperazine have been developed, and their reactions with [NEt₄]₂[ReBr₃(CO)₃] have been investigated. The compounds [Re(CO)₃{(NC₅H₄CH₂)NCH₃(C₂H₄)NHCH₃}]Br (4), [Re(CO)₃{(NC₅H₄CH₂)NCH₃(C₂H₄)NCH₃(CH₂)_xCOOC₂H₅}]Br (x = 1, 5; x = 4, 6) [Re(CO)₃{(NC₅H₄CH₂)NH(C₂H₄)N(CH₃)₂}]Br (7), [Re(CO)₃{(NC₅H₄CH₂)N(CH ₂COOC₂H₅)(C₂H₄)N(CH₃)₂}]Br (8) and [Re(CO)₃(NC₅H₄CH₂)(C₂H₄NH₂)N(CH₂)₃-CH₃Ophenpip]Br (9) (phenpip: phenylpiperazine, -C₆H₄-(CH₂CH₂)₂N-) were prepared and characterized by elemental analysis, NMR, IR, HSMS and X-ray crystallography. All complexes exhibit fac-{Re(CO)₃N₃} coordination geometry in the cationic molecular unit. Crystal data for C₁₃H₁₇BrN₃O₃Re (4): orthorhombic, Pbca, a = 13.4510(8) Å, b = 10.5728(6) Å, c = 22.5378(13) Å, V = 3205.2(3) ų, Z = 8; C₁₇H₂₃BrN₃O₅Re (5): orthorhombic, Pcca, a = 16.5907(7) Å,b = 14.8387(6) Å, c = 16.7075(7) Å, V = 4113.1(3) ų, Z = 8; C₁₃H₂₅BrN₃O₇Re (7 · 4H₂O): monoclinic, P2₁/n, a = 14.0698(17) Å, b = 9.6760(12) Å, c = 15.6099 (19) Å, β = 114.930(2)°, V = 1927.1(4) ų, Z = 4; C₁₇H₂₃BrN₃O₅Re (8): monoclinic, P2₁/n, a = 7.5312(5) Å, b = 16.0366(10) Å, c = 16.8741(10) Å, β = 98.9990(10)°, V = 2012.9(2) ų, Z = 4.     

Synthesis and characterization of tetrairon-tungsten cluster complex containing a μ4, η-carbonyl ligand

Reaction of [(PPh₂C₅H₄)Cp₃Fe₄(CO)₄] (1) with (CO)₄W(CH₃CN)₂ at ambient temperature affords [(CO)₄W(PPh₂C₅H₄)Cp₃Fe₄(CO)₄] (2) as the major product, together with a small amount of [(CO)₅W(PPh₂C₅H₄)Cp₃Fe₄(CO)₄] (3). Compound 3 can be obtained in good yield by treating (CO)₅W(CH₃CN) with equal molar of 1, and reaction of 3 with Me₃NO in acetonitrile solvent produces 2 exclusively. The crystal structures of 2 and 3 have been determined by an X-ray diffraction study. Compound 2 contains an interesting μ₄, η²-CO ligand, where two electrons donated by the carbon atom are involved to bridge a Fe₃ face and two electrons from oxygen are donated to the tungsten(0) atom.     

Hydrophilicity effect on CO2/CH4 separation using carbon nanotube membranes: insights from molecular simulation

Abstract

Molecular simulation methods were applied to study the effect of hydrophilicity on CO₂/CH₄ separation using carbon nanotube (CNT) membranes. CNTs with a diameter of ~1 nm were functionalised by varying amounts of carbonyl groups, in order to achieve various hydrophilicity. The presence of –CO groups inside the CNT allow a significant gain in the diffusion selectivity of CO₂, while in contrast the adsorption selectivity is hardly changed. The corresponding permeation selectivity increases as the hydrophilicity of the CNT-based membrane increases. However, the permeability of CO₂ decreases due to a combination of the intermolecular interactions between the gas and functional groups and the steric effects of the added functional groups. Considering both the permeation selectivity and permeability, it was found that the maximum separation performance is achieved in a certain hydrophilic CNT membrane. Moreover, the separation performance of hydrophilic CNTs for CO₂/CH₄ mixtures breaks the Robeson upper bound.     

New mono and dinuclear arene ruthenium chloro complexes containing ester substituents

The dinuclear arene ruthenium complexes [RuCl₂{C₆H₅(CH₂)₃OCO-p-C₆H₄-OC₈H₁₇}]₂ (1) and [RuCl₂{p-C₆H₄(CH₂COOCH₂CH₃)₂}]₂ (2) have been obtained by dehydrogenation of the corresponding cyclohexadiene derivative with ruthenium chloride hydrate. The single-crystal X-ray structure analysis of 2 shows the arene ligands to be involved in slipped-parallel π-π stacking interactions with neighbouring molecules, thus forming infinite chains along the b-axis. The dinuclear complexes 1 and 2 react with two equivalents of triphenylphosphine (PPh₃) to give in excellent yield the corresponding mononuclear phosphine complexes [RuCl₂{C₆H₅(CH₂)₃OCO-p-C₆H₄-OC₈H₁₇}(PPh₃)] (3) and [RuCl₂{p-C₆H₄(CH₂COOCH₂CH₃)₂}(PPh₃)] (4), respectively. The single-crystal X-ray structure analysis of 4 reveals the formation of a dimer through two C-H?Cl interactions in the solid state.     

Molecular insight into the micro-behaviors of CH4 and CO2 in montmorillonite slit-nanopores

Abstract

The Grand Canonical Monte Carlo (GCMC) and molecular dynamics (MD) simulation methods were used to investigate the adsorption and diffusion properties of CH₄ and CO₂ in montmorillonite slit-nanopores. It is found that, both CH₄ and CO₂ could adsorb closely onto the pore surface, while different adsorption states occur for CH₄ and CO₂, respectively, in montmorillonite slit-nanopores. Competitive adsorption of CO₂ over CH₄ exists in montmorillonite slit-nanopores, especially at the lower pressures, which is attributed to the different interaction intensity between the CH₄–CO₂ molecules and the pore surface. The diffusion coefficients of CH₄ and CO₂ both decrease with the enhanced pressures, while the CO₂ has a relative weak diffusion coefficient comparing with CH₄. A well displacement of the residual CH₄ by CO₂ in montmorillonite slit-nanopores was investigated, which is found that the displacement efficiency increases with the enhanced bulk pressures. It was determined that, the CO₂ can be captured and reserved in the montmorillonite slit-nanopores during the displacement, and the sequestration amount of CO₂ gets enhanced with the bulk pressure increasing. This study provides micro-behaviours of CH₄ and CO₂ in montmorillonite slit-nanopores, for the purpose to give out useful guidance for enhancing shale gas extraction by injecting CO₂.     

Acetylcholinesterase/Butyrylcholinesterase inhibition activity of some new carbacylamidophosphate deriviatives

Eight newly synthesized carbacylamidophosphates with the general formula RC(O)NHP(O)Cl₂ with R = pCl–C₆H₄ 1a, pBr–C₆H₄ 2a, C₆H₅ 3a, and pMe–C₆H₄ 4a and RC(O)NHP(O)(NC₄H₈O)₂ R = pCl–C₆H₄ 1b, pBr–C₆H₄ 2b, C₆H₅ 3b, pMe–C₆H₄ 4b, were selected to compare the inhibition kinetic parameters, IC₅₀, K_i, k_p and K_D, on human erythrocyte acetylcholinesterase (hAChE) and bovine serum butyrylcholinesterase (BuChE), Also, the in vivo inhibition potency of compound 2a, 2b and 3a, were studied. The data demonstrates that compound 2a and compound 2b are the potent sensitive as AChE and BuChE inhibitors respectively, and the inhibition of hAChE is about 10-fold greater than that of BuChE.     

Complexes of the {ReOX2} (X = Cl, Br) core with single amino acid chelate derivatives

The reactions of 1 equiv. of the ligand 3-(ethoxycarbonylmethyl-pyridin-2-ylmethyl-amino)-propionic acid methyl ester (2) with the Re(V) starting materials [ReOX₃(PPh₃)₂] (X = Cl, Br) in refluxing chloroform yielded the Re(V)-oxo dihalide complexes [ReOX₂{(C₅H₄NCH₂)N(CH₂CO₂)(C₂H₄CO₂CH₃)}] (X = Cl, 3; X = Br, 4). The complexes were characterized by elemental analysis, NMR and IR spectroscopy, cyclic voltammetry and X-ray crystallography. Complex 3 displays distorted octahedral coordination geometry with the tridentate ligand coordinating facially to the Re(V) center. The carboxylate oxygen atom occupies an axial site trans to the ReO bond. The two chlorine atoms consequently adopt a cis configuration.     

Synthesis, crystal structure and DNA interaction studies on mononuclear zinc complexes

A new family of mononuclear Zn(II) complexes [Zn(Pyimpy)₂](ClO₄)₂ (1), [Zn(Pyimpy)(Cl)₂] (2), [Zn(Pyimpy)(SCN)₂] (3) and [Zn(Pyimpy)(N₃)₂] (4) were synthesized using designed tridentate ligand Pyimpy having NNN donors (Pyimpy: (2-((2-phenyl-2-(pyridin-2-l)hydazono)methyl)pyridine)). Complexes were characterized by different spectroscopic studies and it has been found out that all complexes exhibited strong fluorescent emission at room temperature. Molecular structures of [Zn(Pyimpy)₂](ClO₄)₂·C₆H₅CH₃·0.5H₂O (1·C₆H₅CH₃·0.5H₂O) and [Zn(Pyimpy)(Cl)₂]·CH₃CN (2·CH₃CN) were determined by X-ray crystallography and ligand coordinated Zn(II) ions was described as distorted octahedral and distorted square pyramidal, respectively. DNA binding properties of these complexes were investigated by absorption spectral, fluorescence quenching and circular dichroism spectral studies.     

Flooding-induced soil and plant ethylene accumulation and water status response of field-grown tobacco

Summary Ethylene (C₂H₄) accumulation in flooded soil was related to oxygen (O₂), redox potential (Eh), and flooding rate. The water status response of tobacco (Nicotiana, tabacum L.) to these conditions was evaluated from stem diameter, relative water content, leaf water potential, and C₂H₄ content of leaf tissue. Treatments were: flooded with either 0,5, or 15 cm of water per day for 6 days. By the third day, O₂ in the soil decreased to less than 9% in treatments flooded with 5 or 15 cm of water. When O₂ in the soil air was less than 9% and redox potential (Eh) was less than +150 mv, most of the soil air samples contained some C₂H₄ and 16% contained more than 6 ppm. Very little C₂H₄ was present in soil air when O₂ exceeded 9%. Tobacco leaf C₂H₄ peaked 3 days after flooding and then declined to the preflooding level a day later, one day ahead of the rapid increase in soil C₂H₄. Wilting developed progressively beginning with the rise of C₂H₄ in the soil; leaf water potential, stem diameter, and relative leaf water content all were decreased. Soil-and plant-produced C₂H₄ are suggested as factors in reducing root permeability and increasing resistance to water uptake by tobacco.Contribution of the USDA-SEA/AR, in cooperation with the South Carolina Experiment Station.     

Theoretical study of the intermolecular potential energy and second virial coefficient in the mixtures of CH4 and Kr gases: a comparison with experimental data

The intermolecular potential energy surface (IPS) in the mixtures of CH₄–Kr gases from ab initio calculations has been explored. The ab initio calculation was performed at the second-order Møller–Plesset perturbation theory (MP₂), with the 6-311+G(2df,2pd) basis set, for three relative orientations of two CH₄–Kr molecules as a function of CH₄–Kr separation distance. In this work, the IPS, U(r), of the CH₄–Kr complex has been investigated, where the vertex (V), edge (E) and face (F) of CH₄ approaches to Kr have been considered. Then, adjustable parameters of the Lennard-Jones and Buckingham potential energy function are fitted to the ab initio MP2/6-311+G(2df,2pd) interaction energies for three different orientations. Assuming a given set of parameters, we theoretically obtained second virial coefficients for the CH₄–Kr system, and compared with the experimental data at different temperatures. Trivial differences can be observed between the experimental and computational results.     

Solution-mediated syntheses and characterizations of two new zincophosphites [C6H14N2]0.5[Zn(H2PO3)2] and [C4H12N2]0.5[(CH3)2NH2][Zn2(HPO3)3]

Two new zincophosphites [C₆H₁₄N₂]_0.5[Zn(H₂PO₃)₂] 1 and [C₄H₁₂N₂]_0.5[(CH₃)₂NH₂][Zn₂(HPO₃)₃] 2 have been solvothermally synthesized in mixed solvents of N,N-dimethylformamide (DMF) and 1,4-dioxane (DOA), respectively. Single-crystal X-ray diffraction analysis reveals that compound 1 exhibits a neutral inorganic chain formed by ZnO₄ and HPO₂(OH) units. Interestingly, the left- and right-handed hydrogen-bonded helical chains are alternately formed via the hydrogen-bonds between two adjacent chains. Compound 2 exhibits a layer structure with 4- and 12-MRs formed by ZnO₄ and HPO₃ units, in which two kinds of organic amine molecules both act as countercations to compensate the overall negative electrostatic charge of the anionic network.     

Synthesis and characterisation of new molybdenum - oxo complexes containing diphenylphosphinylacetic acid and 2-(tert-butylsulphoxide)phenyldiphenylphosphine oxide as bidentate ligands

Reaction of the ligands diphenylphosphinylacetic acid Ph₂P(O)CH₂COOH (1) and 2-(tert-butylthio)phenyldiphenylphosphine oxide Ph₂P(O)C₆H₄^tBuS (2) with “MoO₂Cl₂”, resulted in two complexes MoO₂Cl₂Ph₂P(O)CH₂COOH (3) and MoO₂Cl₂Ph₂P(O)C₆H₄^tBuS(O) (4). Complexes 3 and 4 were isolated and analysed by ¹H NMR, ³¹P NMR and X-ray crystallography. Complex 3 crystallised with a molecule of the free ligand in a 1:1 ratio (3·1) and complex 4 crystallised with molecules of the solvent CH₂Cl₂ within the unit cell in a 2:1 ratio (4·0.5CH₂Cl₂). Tetrameric arrangements comprised of hydrogen bonds were observed in complexes 1 and 3. Complex 4 exhibited a seven-membered ring structure owing to the oxidation of the sulphide in 2 to sulphoxide and coordination of this ligand via the oxygen atoms to the molybdenum atom.