The effectiveness of delineating ecoregions in the Kyushu region of Japan to establish environmental indicators

Throughout Japan, numerous restoration projects and efforts to conserve the river environment are underway. However, in spite of such efforts, effective measures to conserve the river ecosystem or post-evaluation of restoration projects remain insufficient due to a lack of environmental indicators. In many European countries and the United States, a number of biological indicators have been developed and adapted. However, it appears to be difficult to directly apply these indicators to Japan, because its biota is finely classified according to its many islands and peninsulas. The ultimate goal of this study is to comprehensively evaluate indicators of aquatic biodiversity from both physical and biological aspects. We divided the Kyushu region in Japan into several ecoregions as a preliminary step to establish an indicator. We delineated the ecoregions of the Kyushu region using the fish fauna data of 21 rivers within the Kyushu region. Presence–absence (0/1) data for each fish species were used to run a two-way indicator species analysis (TWINSPAN analysis). As a result, the Kyushu region was divided into four ecoregions (A: northwest Kyushu, B1: northeast Kyushu, B2: south Kyushu, and C: Amami-Oshima Island). Each ecoregion was characterized by the following fish species: (A) Cyprinidae, in particular Acheilognathinae, is abundant; (B1) Gobiidae is abundant, while Cyprinidae such as Tanakia limbata (not confirmed in B2) are also present; (B2) Gobiidae is abundant, while Rhingobius sp. DA and Rhingobius sp. CO (not confirmed in B1) are present. These results indicate that the fish fauna of the Kyushu region is finely delineated, and that an assessment standard for biological integrity should be established, based on differences in fish fauna.     

Assessing Fish and Motile Fauna around Offshore Windfarms Using Stereo Baited Video

There remains limited knowledge of how offshore windfarm developments influence fish assemblages, particularly at a local scale around the turbine structures. Considering the existing levels of anthropogenic pressures on coastal fish populations it is becoming increasingly important for developers and environmental regulators to gain a more comprehensive understanding of the factors influencing fish assemblages. Improving our ability to assess such fish populations in close proximity to structures will assist in increasing this knowledge. In the present study we provide the first trial use of Baited Remote Underwater Stereo-Video systems (stereo BRUVs) for the quantification of motile fauna in close proximity to offshore wind turbines. The study was conducted in the Irish Sea and finds the technique to be a viable means of assessing the motile fauna of such environments. The present study found a mixture of species including bottom dwellers, motile crustaceans and large predatory fish. The majority of taxa observed were found to be immature individuals with few adult individuals recorded. The most abundant species were the angular crab (Goneplax rhomboides) and the small-spotted catshark (Scyliorhinus canicula). Of note in this study was the generally low abundance and diversity of taxa recorded across all samples, we hypothesise that this reflects the generally poor state of the local fauna of the Irish Sea. The faunal assemblages sampled in close proximity to turbines were observed to alter with increasing distance from the structure, species more characteristic of hard bottom environments were in abundance at the turbines (e.g. Homarus gammarus, Cancer pagarus, Scyliorhinus spp.) and those further away more characteristic of soft bottoms (e.g. Norwegian Lobster). This study highlights the need for the environmental impacts of offshore renewables on motile fauna to be assessed using targeted and appropriate tools. Stereo BRUVs provide one of those tools, but like the majority of methods for sampling marine biota, they have limitations. We conclude our paper by providing a discussion of the benefits and limitations of using this BRUV technique for assessing fauna within areas close to offshore windfarms.     

Biostratigraphie et Poissons fossilesde la formation de l'Argile de Boom (Oligocène moyen du Bassin Belge)

The Clay of Boom, Rupelian (R₂c of BelgianGeological Map) was sampled in five quarries of the type area (Sint-Niklaas, Steendorp, Schelle, Terhagen, Kruibeke) for otoliths and other fish remains.At the moment 65 species are known from this unit, of which 31 are represented in our samples by otoliths or teeth. The fish fauna of the Clay of Boom is essentially a marine fauna suggesting that the clay was deposited in a calm, rather deep part of the continental shelf.The Elasmobranch fauna has no biostratigraphic value, although 5 new species were identified: Pristiophorus rupeliensis, Raja casieri, Raja cecilae, Raja heinzelini and Raja terhagenesis.The Teleostean fauna is dominated by Gadidae.a typical Northern Atlantic group, and includes one species new to science «genus Gadidarum ensiformis. The dominance of Gadids reflects the progressive replacement of the Indo-Pacific fauna existing during the Eocene, by a more Atlantic one. Some of the 69 lithological subunits recognized on lithological features, are also characterized by different otolith associations and can be correlated in the different quarries sampled. Some of these (49, 41 and 35) are further more characterized by a high frequency of otoliths; therefore these can probably be localised in borings and used for correlation. The Teleostean - otoliths permit a local biozonation of the Clay of Boom. The upper part of the clay is limited below by bed 38 and characterized by the association Argentina parvula - «genus Gadidarum parvus (typical form), the middle part by «genus Gadidarum parvus (thick-set-form) and the lower part of which bed 30 forms the top is characterized by the association Raniceps tuberculosus - Trisopterus elegans. In this part of the clay otoliths are scarce.     

Chondrichthyan and actinopterygian remains from theLower Permian Copacabana Formation of Bolivia

Two horizons of the marine Lower Permian (Leonardian) Copacabana Formation have yielded fish remains, on the south-western slope of the Jacha Khatawi Hill, Yaurichambi, La Paz department, Bolivia. This fish fauna consists of teeth and scales of chondrichthyans (Eugeneodontida, Petalodontida, ? Bradyodonti, Elasmobranchii) and actinopterygians (? Plastysomidae). The Eugeneodontida are represented by a new species of a large Agassizodontidae, Parahelicoprion mariosuarezi n.sp., based on a large symphysial tooth series which resembles P. clerci from the Lower Permian Arta beds of the Urals. The Petalodontida are represented by a fragment of a large symphysial tooth which may be referred to the pristodontid genus Megactenopetalus, known else-where from the Lower Permian of the U.S.A. and China. Some isolated crushing teeth may questionably be referred to a bradyodont, possibly Helodus or Lagarodus. Some elasmobranch teeth of «Cladodus type also occur in this locality. Some hemispherical teeth of «phyllodont type and some scales are tentatively referred to the actinopterygian family Platysomidae. These findings are the first record of determinable marine Permian fishes in the Andean region of South America. The overall composition of this fauna agrees fairly well with the fish fauna known from the Marine Lower Permian of United States and eastern Asia.     

Condition and size of the non‐native pikeperch Sander lucioperca (Linnaeus, 1758) in Portuguese river basins

We studied life‐history traits focusing on the growth and condition of the pikeperch Sander lucioperca to evaluate its phenotypic plasticity when introduced to new environments. Pikeperch is a non‐native fish introduced to Iberian freshwater fauna in 1998 that quickly spread to other river basins through human‐mediated activities, occupying now a wide variety of habitats along mainland Portugal. Condition (K and SMI), fork length at age, and length–weight relationships were studied for Portuguese populations. Pikeperch fork length for ages 1, 2, 3, and 4 was different between several populations. We applied generalized linear models (GLM) to study the influence of habitat type, latitude, altitude, time after first detection, and fish prey richness on pikeperch populations size at age 4 and condition. We observed higher condition values on populations from lower altitudes at lentic systems more recently introduced. But higher fork length at age 4 was found in populations from higher altitudes, on older populations with higher prey richness. Habitat type, time since first detection, and fish fauna composition are discussed as the main environmental factors explaining the observed phenotypic plasticity with concerns on predatory impact on native fauna.     

A Fish Assemblage from the Middle Eocene from Libya (Dur At-Talah) and the Earliest Record of Modern African Fish Genera

In the early nineteen sixties, Arambourg and Magnier found some freshwater fish (i.e., Polypterus sp., Siluriformes indet. and Lates sp.) mixed with marine members in an Eocene vertebrate assemblage at Gebel Coquin, in the southern Libyan Desert. This locality, aged ca 37–39Ma and now known under the name of Dur At-Talah, has been recently excavated. A new fish assemblage, mostly composed of teeth, was collected by the Mission Paléontologique Franco-Libyenne. In this paper, we describe freshwater fish members including a dipnoan (Protopterus sp.), and several actinopterygians: bichir (Polypterus sp.), aba fish (Gymnarchus sp.), several catfishes (Chrysichthys sp. and a mochokid indet.), several characiforms (including the tiger fish Hydrocynus sp., and one or two alestin-like fish), and perciforms (including the snake-head fish Parachanna sp. and at least one cichlid). Together with the fossiliferous outcrops at Birket Qarun in Egypt, the Libyan site at Dur At-Talah reduces a 10-Ma chronological gap in the fossil record of African freshwater fish. Their fish assemblages overlap in their composition and thus constitute a rather homogenous, original and significant amount of new elements regarding the Paleogene African ichthyofauna. This supports the establishment of the modern African freshwater fish fauna during this time period because these sites mostly contain the earliest members known in modern genera.     

Säugetiere, Fisch-Otolithen, Ostracoden, Mollusken und Charophyten aus den Süßwasser- Schichten (Oligozän) von Wolfsheim im Mainzer Becken

The Süßwasser-Schichten (Freshwater Beds) (Oligocene) in the Mainz Basin are a paleontologically poorly studied formation. A succession of predominantly lacustrine marls from Wolfsheim can be attributed to the Süßwasser-Schichten on basis of a palaeoecological and biostratigraphic analysis of its mammal teeth, fish otoliths, ostracods, mollusks, foraminifera and charophytes. The occurrence of the mammal speciesToeniodus aff.hexalophodus andIssiodoromys minor (primitive form) enables an attribution of the Süßwasser-Schichten to the reference level MP 24 of the eurasiatic mammal biostratigraphic zonation. As the reference fauna of level MP 24 is believed to occur in a lithostratigraphically markedly lower horizon, viz. the basal Cyrenenmergel (Cyrena Marl), a re-examination of its origin is suggested. The mammal age of the so-called Süßwasser-Schichten from the locality Heimersheimer Berg is MP 30. Therefore, we suggest a correlation of Heimersheimer Berg with the Mittlere Cerithien-Schichten (MiddleCerithium Beds). The fish fauna of Wolfsheim shows close biogeographical relationships with the fish fauna of Saint-Martin-de-Castillon in southern France and indicates an age around the Rupelian/Chattian boundary. It cannot be decided at the moment whether the Süßwasser-Schichten are of late Rupelian or early Chattian age.     

Benthic fauna bio-irrigation effects on nutrient regeneration in fish farm sediments

Impacts of organic enrichment and a modified benthic fauna community (caused by fish farming) on benthic mineralization rates and nutrient cycling were studied in sediments at one Danish and one Cypriote fish farm. Sediment organic matter concentration and macrofauna community composition were manipulated in microcosms and changes in total benthic metabolism (oxygen consumption, TCO₂ production), anaerobic metabolism (sulfate reduction rates), nutrient fluxes and sediment parameters were followed for a period of 3 weeks. Mineralization rates were found to be highly correlated with irrigation velocities and largest fauna effects were found in the Danish sediments with the large and active irrigating climax species (Nereis diversicolor and Macoma balthica). Eastern Mediterranean climax species (Glycera rouxii and Naineris laevigata) also stimulated mineralization rates but to a smaller extent due to lower irrigation, whereas the opportunistic species (Capitella in Danish sediment and Hermodice carunculata in Cypriote sediment) showed less effect on mineralization. Ammonium and phosphate release increased with increasing irrigation velocities, but much less in Cyprus indicating higher nutrient retention at the ultra-oligotrophic location compared to eutrophic Danish site. Irrigation velocities, and thus mineralization rates, increased by organic matter loading, indicating larger fauna-induced oxidation in enriched environments. The result implies that a change in fauna structure in fish farm sediment towards smaller opportunistic polychaete species with lower irrigation will result in slower mineralization rates and potentially increase accumulation of organic waste products.     

Do coral-reef fish faunas have a distinctive taxonomic structure?

Do the highly diverse fish faunas that associate with coral reefs have distinguishing taxonomic and ecological characteristics, as proposed by Choat and Bellwood (1991) and Bellwood (1996)? Does a 50?my old (Eocene) fossil fish fauna from Italy represent a coral-reef fish assemblage that provides unique information about the evolution of such assemblages, as claimed by Bellwood (1996)? I compared the structure of the reef fish faunas of adjacent tropical regions rich and poor in coral reefs, in both America and Polynesia, and found that they exhibit no substantive differences in relative species richness among families of typical “coral-reef” fishes. While coral-rich regions have larger reef fish faunas, a variety of factors probably contribute to such differences. Thus coral-reef fish faunas may lack a distinctive taxonomic structure. A similar comparative approach would be useful for assessing whether assemblages of fishes on coral reefs have distinctive ecological characteristics. Based on patterns of habitat use by modern tropical shorefishes, the Italian Eocene fauna includes few definite reef fishes, and may well consist primarily of non-reef fishes preserved in a non-reef habitat. Until we know more about the environment in which those fossils were preserved, that fauna can contribute little to understanding how coral reef fish assemblages have evolved.     

Middle–Late Ordovician brachiopods from Ningnan,southern Sichuan Province,Southwest China: Implications for macroevolution and palaeogeography

Middle to Late Ordovician brachiopods from the Huadan Formation (upper Darriwilian–Sandbian) of Ningnan County, southern Sichuan Province, are systematically documented here for the first time. The locality belongs to the western margin of the Upper Yangtze Platform, South China palaeoplate, and the brachiopod fauna includes one new genus and three new species as well as five other constituents: Hingganoleptaena sp., Acculina zhongliangziensis n. sp., Ningnanmena longisepta n. gen. n. sp., Kassinella (Trimurellina) minuta n. sp., Lepidorthis typicalis Wang, 1955, Protoskenidioides weixinensis Zhan and Jin, 2005, Porambonites transversus Xu, Rong and Liu, 1974, and Psilocamerella sp. Taxonomically it is a typical representative of a Middle to early Late Ordovician brachiopod fauna, and, together with some other evidence from other fossil groups like trilobites, conodonts, chitinozoans, a late Darriwilian–Sandbian age could be inferred for the horizon yielding this fauna. According to the richness of each constituent, this fauna is suggested to be called the Acculina-Ningnanmena fauna (ANF). Numerical palaeogeographical analysis shows that two broad palaeobiogeographic provinces could be recognized during this particular time interval, and, although the ANF is grouped into the South China cluster, it shares very little similarity with other representatives of that group except for two cosmopolitans. It further confirms that the Great Ordovician Biodiversification Event (GOBE), in other words the Ordovician radiation, was actually manifested by the strong localization of major marine organisms such as brachiopods, trilobites, graptolites, etc.     

Fish assemblage structure in an estuary of the Atlantic Forest biodiversity hotspot (southern Brazil)

We described the fish assemblage in the estuary of the Guaraguaçu River (one of the largest tributaries of the Paranaguá Bay Estuary, located within Brazil’s Atlantic Forest Biosphere Reserve) from June 2005 to May 2006, and assessed the seasonal and spatial effects of abiotic environmental attributes on the fish assemblage structure. Despite some oscillations in salinity, the upper and lower estuaries had year-round persistent oligohaline and polyhaline conditions, respectively. Despite high species richness (55 species), the Guaraguaçu River Estuary fish community contains a few dominant taxa; 11% of the richness accounts for >60% of its density and biomass. The most abundant species (in terms of both biomass and density) was Atherinella brasiliensis. Species whose densities were most strongly associated with the upper estuary were Centropomus parallelus, Ctenogobius schufeldti, Eucinostomus melanopterus, Platanichthys platana, Trinectes paulistanus, and Eugerres brasilianus. Those whose densities were most strongly associated with the lower estuary were A. brasiliensis, Sphoeroides greeleyi, Eucinostomus argenteus, Sphoeroides testudineus, Diapterus rhombeus, and Harengula clupeola. Throughout the year, canonical correspondence analysis identified: (1) the pattern of horizontal stratification of salinity along the river as being the most important variable for explaining most of the fish fauna structure; and (2) a strong relationship between the fish fauna and the salinity gradient along the estuary. Analysis of similarity further confirmed that each estuarine zone supports a year-round persistent and relatively homogeneous fish species assemblage. Total mean density and biomass remained constant over time in each estuarine habitat, but density shifted in the most abundant species, which appears related to recruitment patterns. Such species and abundance persistence likely occurs because seasonal rainfall-induced changes in river discharge are not sufficient to significantly shift runoff and salinity and thus fish assemblage structure (species composition, density and biomass) along the estuary. Such a lack of seasonal fish fauna movement as a response to changes in river flow contrasts with other estuarine systems around the world.     

Trilobites d'affinité bohémienne dans l'Éodévonien des Pyrénées centrales françaises

In the upper Adour valley, a series attributed to the Carboniferous yield conodonts and a variegated trilobite fauna with exclusively bohemian affinity. The trilobite fauna is represented by six families, the most of them being described in the Pyrénées for the first time. Trilobites indicate the Praguian whereas conodonts upper Lochkovian-Praguian age. A new unnamed subspecies of Crotalocephalus sternbergi (Boeck, 1827) is described.     

Further evidence for the presence of holoptychiid porolepiforms (Sarcopterygii,Dipnomorpha) from the Frasnian of Colombia

The Devonian (Frasnian) of Colombia has provided important information on the taxonomical diversity and palaeobiogeographic relationships of the Late Devonian marginal marine vertebrate faunas of South America (northwestern margin of Gondwana). This fauna is mostly composed of Gondwanan endemics, but includes two taxa also known in Euramerica: the antiarchan placoderm Asterolepis and the porolepiform sarcopterygian Holoptychius. The occurrence of holoptychiid porolepiforms in Colombia was previously suggested based solely on the presence of scales attributed to Holoptychius, although with caution. Here, we describe further holoptychiid remains that include a large isolated tooth with dendrodont microstructure, typical of porolepiforms, and additional Holoptychius scales. These new findings increase the record of holoptychiid porolepiform occurrences in Gondwana and suggest that dispersion of fish faunas between Euramerica and Gondwana by the beginning of the Late Devonian was possible through South America.     

Le Crocodilien Steneosaurus (Mesosuchia,Teleosauridae) dans le Jurassique supérieur franc-comtois (Jura,France)

Two new fossil vertebrate localities have been discovered close to each other in the Upper Jurassic (Effingen beds, Upper Oxfordian) of the Southern Jura department (France). One of the localities have yielded an incomplete skeleton of the crocodilian Steneosaurus (including a well preserved skull), as well as fish remains and an abundant invertebrate fauna. The second locality has mainly yielded various fragmentary bones of Steneosaurus. This is the first discovery of well preserved crocodilian remains in the Oxfordian of the Jura.     

Effects of damming on the biological integrity of fish assemblages in the middle Lancang-Mekong River basin

The Lancang-Mekong River basin contains a diverse assemblage of freshwater fish species; however, their populations are threatened by current and planned dam construction along the river. Fish assemblages are sensitive indicators of environmental degradation and can be used to assess aquatic ecosystem health. This research compared the fish fauna at the Xiaowan hydropower dam located on the middle reaches of the Lancang-Mekong River at three time periods: in 2008 (before impoundment), 2010 (water storage) and 2011 (full operation). A modified fish index of biological integrity (modified F-IBI) was developed and it synthesized information on the taxonomic composition, trophic guilds, and tolerance levels of the fish and habitat diversity to quantitatively assess the condition of fish populations before and after damming. This index also was used to assess the longitudinal diversity of the fish fauna along the river channel and could assess the barrier effect associated with the dam. Jaccard's index of similarity was used as a feasible tool to assess fish diversity loss and biotic homogenization. The analysis clearly showed a homogenization of the fish communities after damming, and the reservoir impoundment region showed much more serious homogenization than the downstream region. The Xiaowan dam had an immediate and profound effect on the fish fauna in this region of the Lancang-Mekong River. A total of eight cascading dams are planned for development in this region, and, unless conservation mitigation efforts are considered, the results could be devastating on the native fish populations of middle reaches of the Lancang-Mekong River basin.     

Seasonal and interannual variation of ichthyoplankton off Mauritania

Changes of the quantitative and qualitative composition of ichthyoplankton off Mauritania (21–16° N) in different seasons of 1997–2008 are analyzed. In this area, pelagic eggs and larvae of over 120 fish species belonging to 71 families are recorded. In warm periods, the fish of the tropical fauna intensively spawn off Mauritania; round sardinella Sardinella aurita, West-African horse mackerel Trachurus trecae, and jack mackerel Caranx rhonchus are dominant. In cold periods, active spawning of fish belonging to the tropical fauna is recorded, the most abundant are European pilchard Sardina pilchardus, European horse mackerel Trachurus trachurus, and Atlantic mackerel Scomber japonicus. The spawning biomass of principal commercial fish species is calculated on the basis of the quantity of eggs laid by females. Environmental factors control fluctuations of abundance and distribution of ichthyoplankton in the considered region.     

Amphidromy links a newly documented fish community of continental Australian streams, to oceanic islands of the west Pacific

Background

Indo-Pacific high island streams experience extreme hydrological variation, and are characterised by freshwater fish species with an amphidromous life history. Amphidromy is a likely adaptation for colonisation of island streams following stochastic events that lead to local extirpation. In the Wet Tropics of north-eastern Australia, steep coastal mountain streams share similar physical characteristics to island systems. These streams are poorly surveyed, but may provide suitable habitat for amphidromous species. However, due to their ephemeral nature, common non-diadromous freshwater species of continental Australia are unlikely to persist. Consequently, we hypothesise that coastal Wet Tropics streams are faunally more similar, to distant Pacific island communities, than to nearby faunas of large continental rivers.

Methods/Principal Findings

Surveys of coastal Wet Tropics streams recorded 26 species, 10 of which are first records for Australia, with three species undescribed. This fish community is unique in an Australian context in that it contains mostly amphidromous species, including sicydiine gobies of the genera Sicyopterus, Sicyopus, Smilosicyopus and Stiphodon. Species presence/absence data of coastal Wet Tropics streams were compared to both Wet Tropics river networks and Pacific island faunas. ANOSIM indicated the fish fauna of north-eastern Australian coastal streams were more similar to distant Pacific islands (R = 0.76), than to nearby continental rivers (R = 0.98).

Main Conclusions/Significance

Coastal Wet Tropics streams are faunally more similar to distant Pacific islands (79% of species shared), than to nearby continental fauna due to two factors. First, coastal Wet Tropics streams lack many non-diadromous freshwater fish which are common in nearby large rivers. Second, many amphidromous species found in coastal Wet Tropics streams and Indo-Pacific islands remain absent from large rivers of the Wet Tropics. The evolutionary and conservation significance of this newly discovered Australian fauna requires clarification in the context of the wider amphidromous fish community of the Pacific.     

Eocene siliceous sponges from the Ebro Basin (Catalonia, Spain)

The Eocene (Bartonian) marls of the La Guixa Member and Gurb Member, Vic Marls Formation (Ebro Basin, Catalonia, Spain), contain a very rich and diversified siliceous sponge fauna. The fauna is dominated by hexactinellids; lithistids and other demosponges are rare. It consists of 16 species representing 16 genera. Eleven new species and two new genera are proposed for these sponges: Reguantella cavernosa nov. gen. nov. sp., Regadrella concinna nov. sp. (both Hexactinellida, Lyssacinosa), Eurete clava nov. sp., Pleuroguettardia iberica nov. sp., Aphrocallistes almeriae nov. sp., Hexactinella informis nov. sp. (all Hexactinellida, Hexactinosa), Brachiolites munterensis nov. sp., Centrosia viquensis nov. sp., Callicylix eocenicus nov. sp., Rhizocheton robustus nov. sp. (all Hexactinellida, Lychniscosa), Propetrosia pristina nov. gen. nov. sp. (Demospongia, Haplosclerida). Some genera of sponges in this fauna are still extant, but, in general, the predominant ones are very close in morphology, and, without doubt, closely related to the Late Cretaceous sponges. This fauna also differs considerably, in terms of composition, from most other described faunas of Tertiary sponges from the Mediterranean region, which are dominated by lithistid sponges. Lithistid sponges are rare in this investigated assemblage, which seems most similar to an as yet undescribed Eocene fauna from Italy. There is ecological differentiation in the proportions of particular sponges in various outcrops and/or stratigraphical levels that is clearly associated with water-depth-related controlling factor(s): Munter, Tona and Sta. Cecilia represent the deepest facies, Gurb is intermediate, and St. Roc and Vespella are the most shallow. The exact bathymetric position of the sponge fauna is difficult to estimate, but it seems that 100 m (but probably 200 m and more in the case of the deepest parts) of water depth may be inferred for this facies.     

Floating-leaved and emergent vegetation as habitat for fishes in a eutrophic temperate lake without submerged vegetation

Although submerged vegetation is considered to be the most suitable refuge against predators and form of foraging habitat for small fishes, submerged plants are often scarce or lacking in turbid eutrophic lakes. To evaluate emergent (Zizania latifolia) and floating-leaved (Nelumbo nucifera) vegetation as refuge areas against predators and as foraging habitats for small fishes, we investigated the fauna, abundance, and size distribution of the fish community as well as the abundance of possible prey for small fishes in beds of each vegetation type in a eutrophic shallow lake: Lake Teganuma in Japan. The leaves and stems of N. nucifera occupied an area 4.2 times larger than that of Z. latifolia. The high coverage of the water surface with plants most likely induced the hypoxia found in the N. nucifera bed. The diversity of small fishes was greater in the Z. latifolia bed with piscivorous fish than in the N. nucifera bed without piscivorous fish. The diversity of fish species in the vegetation was enhanced when there was an increased diversity of possible food sources rather than an absence of predators. Some aquatic insects of the same species had a much lower δ¹³C signature at hypoxic locations than at less hypoxic locations in the N. nucifera bed. Such site differences within a bed were not observed in the organisms caught in the Z. latifolia bed. The insects in hypoxic zones with a δ¹³C signature lower than ?30 ‰ were more depleted in ¹³C than the surface sediment or attached algae, suggesting that the larvae in the hypoxic zones incorporated the organic materials generated by methane-oxidizing bacteria. We can therefore conclude that floating-leaved vegetation, especially a N. nucifera bed, is not suitable as a replacement for submerged vegetation because of its potential to induce hypoxia, which can decrease the diversity of the fish fauna.