The cell in the field of gravity and the centrifugal field

It appears that the literature and logic that the earth's gravity has been one factor in the limitation of cell size, as well as being an important influence on the diversity of cell types and sizes throughout biological evolution. Analysis of the literature reveals an inverse relationship between the centrifugal force needed for intracellular stratification and cell size. The cells studied ranged in size from approximately 1 mm (amphibian eggs, Pelomyxa) to 0.01 mm (erythrocyte, lymphocyte), and g-forces ranged from about 100 g to 100 000 g respectively. Stratification within cell nuclei and organelles requires even greater forces, presumably because of their smaller size. Extrapolation from centrifugal forces to the force of gravity, and from the full stratification to the initial sedimentation of cell parts suggests a hypothesis for the evolutionary survival and existence of cells in the field of gravity. Average cell size results, in part, from the physical equilibrium between the destructive influence of the force of gravity and the protective role of diffusion and the cytoskeleton. At increased forces of gravity the cell size would thus be decreased, whereas at lower gravitational forces and weightlessness cell size would be expected to increase. Mechanisms of protection of giant cells against internal sedimentation are based on protoplasmic motion, thin and elongated shape of the cell body, increased cytoplasmic viscosity, and a reduced range of specific gravity of cell components, relative to the ground-plasm. The nucleolus, due to its higher density, is considered as a possible trigger of mitosis.     

Fluorescent and dispersion experiments on biological membranes under micro-gravity

Almost all biological processes, especially those involved in signal reception and signal transduction, depend on the physical and physiological properties of biological membranes. It has been shown, that neuronal tissue and the speed of the action potential (AP) which is the basic neuronal unit of all nervous activity, is sensitive to changes in gravity as well as to other weak external forces. We strongly suppose the membrane to be the most important factor in gravitational responses although it is very difficult to observe the effects of gravity changes on these fragile thermodynamic systems. Therefore we developed two different experiments to measure the structural changes and the lateral membrane tension of spheroid cells under microgravity.     

Cyclotron resonance as a cause of biological effects of weak electric and magnetic fields?

Even weak electric and magnetic fields have been found to cause interaction effects in vitro only within small frequency ranges. The existence of such "frequency windows" may be explained by a cyclotron resonance model which also takes the influence of the earth's magnetic field into consideration. In this paper analytical relations are developed which permit the determination of energy uptake and motion curve diameter. On the basis of this calculations it can be concluded that, giving consideration to interparticle interactions and the limitations of motion curve dimensions due to the limited dimensions of cells and cellular interspaces, energy uptake in vivo is many orders of magnitude below thermal energy, and can therefore be neglected.     

Recent approaches in the analysis of weightlessness effects on arthropod development

The concept of Biological Development refers to the extremely complex process by which every biological organism reproduces starting from a huge single cell, the fertilized egg. It includes all aspects of cellular and intercellular structure and function. In spite of many recent advances, especially at the molecular and genetical level, we are still far from fully understanding the details and mechanisms at work in developmental systems. It is even unclear what physical mechanisms are used by the different molecular components resulting in the emergence of these higher levels of organization. Newman and Comper, have extensively discussed the "generic" physical forces potentially involved in pattern formation, arguing that among others, gravitational effects could be involved in the production of cytoplasmic, tissue and extracellular matrix components rearrangements playing a role in morphogenesis. Although plagued with the problem of being a very weak force, specially at the tiny dimensions of cells, gravity is one of the "generic" physical forces that have been continuously operating on biological organisms during evolution. Few scientists would argue against the idea that at least in the early times of evolution, gravity could have been involved in shaping the spatial inhomogeneities behind the initial phases of development.     

Development of one experimental module to study the modulation of the propagation velocity of chemical excitation waves in gel by weak external force (gravity)

Biological and chemical systems in which the pattern of flow of energy and matter imposes self-organization can be seen as examples of excitable media. One property of such media is the presence of excitation waves. The Belouzov-Zabotinsky(B-Z) reaction system and the retinal spreading depression wave are examples of experimental models of excitable media in which the influence of gravity can be studied. In this paper we describe one especial module constructed to test the influence of gravity in gels of the B-Z system. In the gel condition, convection effects are minimized. The results will be directly comparable to retinal experiments programmed by the same group and complete a series of investigations of systematic comparison of the modulation of chemical and biological excitation waves by weak external forces.     

Inhibitory effect of hypergravity on photosynthetic carbon dioxide fixation in Euglena gracilis.

Photosynthesis, the conversion of light energy into chemical energy, is a critical biological process, whereby plants synthesize carbohydrates from light, carbon dioxide (CO2) and water. The influence of gravity on this biological process, however, is not well understood. Thus, centrifugation was used to alter the gravity environment of Euglena gracilis grown on nutritive agar plates illuminated with red and blue light emitting diodes. The results showed that hypergravity (up to 10xg) had an inhibitory effect on photosynthetic CO2 fixation. Chlorophyll accumulation per cell was essentially unaffected by treatment; however, Chl a/Chl b ratios decreased in hypergravity when compared to 1xg controls. Photosynthesis in Euglena appears to have limited tolerance for even moderate changes in gravitational acceleration.     

Temperature Dependence of Unbinding Forces between Complementary DNA Strands

Force probe techniques such as atomic force microscopy can directly measure the force required to rupture single biological ligand receptor bonds. Such forces are related to the energy landscape of these weak, noncovalent biological interactions. We report unbinding force measurements between complementary strands of DNA as a function of temperature. Our measurements emphasize the entropic contributions to the energy landscape of the bond.     

Research plan to study allelopathy under microgravity]

Living organisms interact each others and form ecological system on the earth. Such interactions between organisms and species have been long known, and studied at a global scale. Allelopathy is a phenomenon observed in many plants that emit specific chemicals acting on other organisms, including animals and microorganisms, in either inhibitory or excitatory ways. We propose to study whether phenomena of allelopathy are modified under altered gravity or not. If biosynthesis, emission and sensing mechanism of allelopathic substances would be affected by gravity, many organisms and ecological system might show different behaviors based on the inter-organisms and species interactions under microgravity. In the macroscopic scale, transport of the substances between organisms is largely affected by convection induced by gravity. Furthermore, the fate of allelopathic substances in confined environment differs from that seen on the earth, because of lacking sink compartment for removal and producing exotic bio-active substances by man-made system. We design basic ground experiment to evaluate gravitational effects on allelopathy applying pseudo-microgravity. Our study contributes to the synthesis of ecological system and its control on spacecrafts and extraterrestrial bodies. It also makes possible to sustain qualitative human life even on the ground under confined artificial environment that dominates in many scenes.     

Physical forces modulate cell differentiation and proliferation processes

Currently, the predominant hypothesis explains cellular differentiation and behaviour as an essentially genetically driven intracellular process, suggesting a gene‐centrism paradigm. However, although many living species genetic has now been described, there is still a large gap between the genetic information interpretation and cell behaviour prediction. Indeed, the physical mechanisms underlying the cell differentiation and proliferation, which are now known or suspected to guide such as the flow of energy through cells and tissues, have been often overlooked. We thus here propose a complementary conceptual framework towards the development of an energy‐oriented classification of cell properties, that is, a mitochondria‐centrism hypothesis based on physical forces‐driven principles. A literature review on the physical–biological interactions in a number of various biological processes is analysed from the point of view of the fluid and solid mechanics, electricity and thermodynamics. There is consistent evidence that physical forces control cell proliferation and differentiation. We propose that physical forces interfere with the cell metabolism mostly at the level of the mitochondria, which in turn control gene expression. The present perspective points towards a paradigm shift complement in biology.     

Origin and Early Evolution of Plant Body Symmetry and Gravity Responses

Land plant bodies exhibit both apical–basal and radial symmetry, and they are able to detect and respond to gravitational forces. These attributes were, likely important factors in the success of earliest plants on land. This study focuses on features of charophycean green algae likely to have been pre‐adaptive to early establishment of plant symmetry and gravitational responses, though most modern charophyceans occupy aquatic habitats where the buoyancy of water counteracts the effects of gravity. Trait mapping suggests that even the earliest‐divergent modern members of the streptophyte clade have bodies whose symmetry departs significantly from the spherical condition, and that cellular mechanisms defining aspects of radial symmetry and polarized tip growth originated early. Genes, cell biological approaches, and taxa are identified for which further exploration is likely to illuminate early evolution of plant body symmetry and gravity responses.     

Why forces between proteins follow different Hofmeister series for pH above and below pI

The relative effectiveness of different anions in crystallizing proteins follows a reversed Hofmeister sequence for pHpI. The phenomenon has been known almost since Hofmeister's original work but it has not been understood. It is here given a theoretical explanation. Classical electrolyte and double layer theory deals only with electrostatic forces acting between ions and proteins. Hydration and hydration interactions are dealt with usually only in terms of assumed hard core models. But there are, at and above biological salt concentrations, other non-electrostatic (NES) ion-specific forces acting that are ignored in such modeling. Such electrodynamic fluctuation forces are also responsible for ion-specific hydration. These missing forces are variously comprehended under familiar but generally unquantified terms, typically, hydration, hydrogen bonding, pi-electron-cation interactions, dipole-dipole, dipole-induced dipole and induced dipole-induced dipole forces and so on. The many important body electrodynamic fluctuation force contributions are accessible from extensions of Lifshitz theory from which, with relevant dielectric susceptibility data on solutions as a function of frequency, the forces can be extracted quantitatively, at least in principle. The classical theories of colloid science that miss such contributions do not account for a whole variety of ion-specific phenomena. Numerical results that include these non-electrostatic forces are given here for model calculations of the force between two model charge-regulated hen-egg-white protein surfaces. The surfaces are chosen to carry the same charge groups and charge density as the protein. What emerges is that for pHpI (where anions are co-ions) the forces increase in the order NaCl相似文献   

Atomic force microscopy-based molecular studies on the recognition of immunogenic chlorinated ovalbumin by macrophage receptors

This report presents simple and reliable approach developed to study the specific recognition events between chlorinated ovalbumin (OVA) and macrophages using atomic force microscopy (AFM). Thanks to the elimination of nonspecific adhesion, the interactions of the native and chlorinated OVA with a membrane of macrophages could be quantified using exclusively the so-called adhesion frequency (AF). The proposed system not only enabled the application of AFM-based force measurements for such poorly defined ligand-receptor pairs but also significantly improved both the acquisition and the processing of the data. The proteins were immobilized on the gold-coated AFM tips from the aqueous solutions containing charged thiol adsorbates. Such surface dilution of the proteins ensured the presence of single or just a few macromolecules at the tip-surface contact. The formation of negatively charged monolayer on the tip dramatically limited its nonspecific interactions with the macrophage surface. In such systems, AF was used as a measure of the recognition events even if the interaction forces varied significantly for sets of measurements. The system with the native OVA, a weak immunogen, showed only negligible AF compared with 85% measured for the immunogenic chlorinated OVA. The AF values varied with the tip-macrophage contact time and loading velocity. Blocking of the receptors by the chlorinated OVA was also confirmed. The developed approach can be also used to study other ligand-receptor interactions in poorly defined biological systems with intrinsically broad distribution of the rupture forces, thus opening new fields for AFM-based recognition on molecular level.     

Mechanical loading history and skeletal biology

A comprehensive theory which relates tissue mechanical stresses to many features of skeletal morphogenesis, growth, regeneration, maintenance and degeneration is reviewed. The theory considers the repeated or intermittent mechanical forces which constitute the loading history on the chondro-osseous skeleton. The results of numerous mechanical stress analyses indicate that the local tissue stress history plays a major role in controlling connective tissue biology. The strong influence of mechanical energy in ontogenesis implies a comparably strong influence in phylogenesis. The fact that the mechanical stress histories in skeletal tissues are directly related to the force of gravity suggests that the life forms that have evolved on Earth are closely tied to our gravitational field.     

Protein interactions in the calf eye lens: interactions between β-crystallins are repulsive whereas in γ-crystallins they are attractive

Non-specific interactions in beta- and gamma-crystallins have been studied by solution X-ray scattering and osmotic pressure experiments. Measurements were carried out as a function of protein concentration at two ionic strengths. The effect of temperature was tested between 7 degrees C and 31 degrees C. Two types of interactions were observed. With beta-crystallin solutions, a repulsive coulombic interaction could be inferred from the decrease of the normalized X-ray scattering intensity near the origin with increasing protein concentration and from the fact that the osmotic pressure increases much more rapidly than in the ideal case. As was previously observed with alpha-crystallins, such behaviour is dependent upon ionic strength but is hardly affected by temperature. In contrast, with gamma-crystallin solutions, the normalized X-ray scattering intensity near the origin increases with increasing protein concentration and the osmotic pressure increases less rapidly than in the ideal case. Such behaviour indicates that attractive forces are predominant, although we do not yet know their molecular origin. Under our experimental conditions, the effect of temperature was striking whereas no obvious contribution of the ionic strength could be seen, perhaps owing to masking by the large temperature effect. The relevance of the different types of non-specific interactions for lens function is discussed.     

A unified partition coefficient theory for chromatography,immobilized enzyme kinetics,and affinity chromatography

A unified treatment of systems containing immobilized biochemical and chromatographic systems was developed from basic thermodynamic considerations of partitioning in biphasic systems. Division of the overall partitions coefficient into electrostatic and nonelectrostatic interactions provided an effective stratagem for analysis of these systems. The properties of both strong and weak ionogenic matrices were explored. It was Found that the matrix charge concentration and the bulk solutions pH and ionic strength completely determine the electrostatic partition coefficient. Hence, the relationships developed allow prediction of partition coefficients from readily obtainable experimental parameters. It was also shown that even at low concentrations, the presence of immobilized protein can alter the properties of the matrix phase. However, a weak ionogenic matrix has an unusual property which allows for a biological switching device. Ina characteristics pH range, such matrices will maintain a constant micro environmental pH while the partitioning of a substrate ion is greatly variable. Finally, the theoretical treatment suggests simple procedures for determination of binding constants from affinity or adsorption chromatography.     

On the calculation of electrostatic interactions in proteins

In this paper we present a classical treatment of electrostatic interactions in proteins. The protein is treated as a region of low dielectric constant with spherical charges embedded within it, surrounded by an aqueous solvent of high dielectric constant, which may contain a simple electrolyte. The complete analysis includes the effects of solvent screening, polarization forces, and self energies, which are related to solvation energies. Formulae, and sample calculations of forces and energies, are given for the special case of a spherical protein. Our analysis and model calculations point out that any consistent treatment of electrostatic interactions in proteins should account for the following. Solvent polarization is an important factor in the calculation of pairwise electrostatic interactions. Solvent polarization substantially affects both electrostatic energies and forces acting upon charges. No simple expression for the effective dielectric constant, Deff, can generally be valid, since Deff is a sensitive function of position. Solvent screening of pairwise interactions involving dipolar groups is less effective than the screening of charges. In fact for many interactions involving dipoles, solvent screening can be essentially ignored. The self energy of charges makes a large contribution to the total electrostatic energy of a protein. This must be compensated by specific interactions with other groups in the protein. Strategies for applying our analysis to proteins whose structures are known are discussed.     

The Role of Solvent in Protein Folding and in Aggregation

We discuss features of the effect of solvent on protein folding andaggregation, highlighting the physics related to the particulate nature and the peculiar structure of the aqueous solvent, and the biological significance of interactions between solvent and proteins. To this purpose we use a generalized energy landscape of extended dimensionality. A closer look at the properties of solvent induced interactions and forces proves useful for understanding the physical grounds of `ad hoc' interactions and for devising realistic ways of accounting for solvent effects. The solvent has long been known to be a crucially important part of biological systems, and times appear mature for it to be adequately accounted for in the protein folding problem. Use of the extended dimensionality energy landscape helpseliciting the possibility of coupling among conformational changes and aggregation, such as proved by experimental data in the literature.     

Illuminating the Dynamics of Intracellular Activity with 'Active' Molecular Reporters

Traditionally, fluorescent and luminescent reporter proteins have been used as indicators of gene expression and protein localization. However, insightful mutagenesis and protein engineering strategies have transformed these simple passive reporters into active biological sensors. Molecular reporters are now being designed to alter their intrinsic optical properties in response to specific biomolecular interactions. Applications for these novel biological sensors range from monitoring intracellular pH and ion fluxes to detecting protein-protein interactions and enzymatic activity. The ability to monitor the dynamics of intracellular activity in response to external stimuli can help elucidate the cascade of events involved in complex processes such as mechanotransduction. Here we review some of the approaches used to create these novel biological sensors, including resonance energy transfer (RET) between reporter proteins and protein fragmentation strategies.     

Biology of size and gravity]

Gravity is a force that acts on mass. Biological effects of gravity and their magnitude depend on scale of mass and difference in density. One significant contribution of space biology is confirmation of direct action of gravity even at the cellular level. Since cell is the elementary unit of life, existence of primary effects of gravity on cells leads to establish the firm basis of gravitational biology. However, gravity is not limited to produce its biological effects on molecules and their reaction networks that compose living cells. Biological system has hierarchical structure with layers of organism, group, and ecological system, which emerge from the system one layer down. Influence of gravity is higher at larger mass. In addition to this, actions of gravity in each layer are caused by process and mechanism that is subjected and different in each layer of the hierarchy. Because of this feature, summing up gravitational action on cells does not explain gravity for biological system at upper layers. Gravity at ecological system or organismal level can not reduced to cellular mechanism. Size of cells and organisms is one of fundamental characters of them and a determinant in their design of form and function. Size closely relates to other physical quantities, such as mass, volume, and surface area. Gravity produces weight of mass. Organisms are required to equip components to support weight and to resist against force that arise at movement of body or a part of it. Volume and surface area associate with mass and heat transport process at body. Gravity dominates those processes by inducing natural convection around organisms. This review covers various elements and process, with which gravity make influence on living systems, chosen on the basis of biology of size. Cells and biochemical networks are under the control of organism to integrate a consolidated form. How cells adjust metabolic rate to meet to the size of the composed organism, whether is gravity responsible for this feature, are subject we discuss in this article. Three major topics in gravitational and space biology are; how living systems have been adapted to terrestrial gravity and evolved, how living systems respond to exotic gravitational environment, and whether living systems could respond and adapt to microgravity. Biology of size can contribute to find a way to answer these question, and answer why gravity is important in biology, at explaining why gravity has been a dominant factor through the evolutional history on the earth.