Studies in the morphology and systematics of berberidaceae

The floral vasculature in three allied genera,Plagiorhegma, Jeffersoria andAchyls is investigated, and the results are compared with those ofEpimedium andVancouveria which are related closely toPlagiorhegma andJeffersonia. The vasculature in the receptacle ofPlagiorhegma andJeffersonia is similar, but that ofAchlys is much simpler. Slightly different trace patterns are observed in the sepals ofPlagiorhegma andJeffersonia. InJeffersonia, the 3-trace condition leaving 2 or 3 gaps is most frequently observed, but inPlagiorhegma traces of a double nature leaving a single gap are more frequent. The traces to the innermost sepals, petals and stamens are usually of a double nature leaving a single gap in both genera. Regular division and fusion are not observed in the receptacular stele. The vascular differentiation between sepals and petals is more advanced inPlagiorhegma andJeffersonia than inEpimedium andVancouveria. InAchlys, the traces are all staminal and single throughout their course. Two parts recognized in the pistils ofPlagiorhegma, Jeffersonia andAchlys are traversed by independent vasculature. The comparisons of pistil morphology including vasculature ofPlagiorhegma, Jeffersonia, Achlys, Epimedium andVancouveria lead to the interpretation that the pistils are based on the same morphological plan. The probable evolutionary trend in pistil is then suggested in these five genera.     

On the Evolution of Dopa decarboxylase (Ddc) and Drosophila Systematics

We have sequenced most of the coding region of the gene Dopa decarboxylase (Ddc) in 24 fruitfly species. The Ddc gene is quite informative about Drosophila phylogeny. Several outstanding issues in Drosophila phylogeny are resolved by analysis of the Ddc sequences alone or in combination with three other genes, Sod, Adh, and Gpdh. The three species groups, melanogaster, obscura, and willistoni, are each monophyletic and all three combined form a monophyletic group, which corresponds to the subgenus Sophophora. The Sophophora subgenus is the sister group to all other Drosophila subgenera (including some named genera, previously considered outside the Drosophila genus, namely, Scaptomyza and Zaprionus, which are therefore downgraded to the category of subgenus). The Hawaiian Drosophila and Scaptomyza are a monophyletic group, which is the sister clade to the virilis and repleta groups of the subgenus Drosophila. The subgenus Drosophila appears to be paraphyletic, although this is not definitely resolved. The two genera Scaptodrosophila and Chymomyza are older than the genus Drosophila. The data favor the hypothesis that Chymomyza is older than Scaptodrosophila, although this issue is not definitely resolved. Molecular evolution is erratic. The rates of nucleotide substitution in 3rd codon position relative to positions 1 + 2 vary from one species lineage to another and from gene to gene. Received: 2 June 1998 / Accepted: 3 September 1998     

New Proboscideans (Mammalia) from the middle Miocene of Thailand

The proboscidean fauna of the middle Miocene of Thailand consists of five taxa, including four elephantoids and one deinothere. The Thai association is dominated by the genera Stegolophodon and Gomphotherium. Stegolophodon is represented by S. nasaiensis and S. praelatidens. The latter species, considered invalid and possibly conspecific with S. latidens, is re‐erected. Its phylogenetic relationships are discussed. The Thai Gomphotherium matches with G. browni from the middle Miocene of Indo‐Pakistan. However, the open nomenclature is employed for the Thai material because it differs from G. browni in terms of curvature of the upper tusk. Intraspecific molar size variation observed in G. cf. browni and Stegolophodon praelatidens is attributed to sexual dimorphism. The Thai proboscidean asssemblage is mainly endemic compared with other contemporaneous Asian faunas although the recognition of Gomphotherium cf. browni denotes faunal affinities with Pakistan. The biostratigraphical implications of the taxa are examined in a regional context. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 703–721.     

Revision of the genera Nemotha Wood-Mason, 1884 and Tricondylomimus Chopard, 1930 stat. rev., with description of a new species (Dictyoptera: Mantodea)

The oriental species previously included in the rarely collected genus Nemotha Wood-Mason, 1884 (Mantodea: Iridopterygidae) are revised. N. coomani (Chopard, 1930) and N. mirabilis Beier, 1933 strongly differ from the type species N. metallica (Westwood, 1845) by family-level morphological features, but share a unique type of forefemoral armament with the genera Hapalopeza Stål, 1877 and Amantis Giglio-Tos, 1915, suggesting Nemotha is of a polyphyletic nature. The genus Tricondylomimus Chopard, 1930 is resurrected from synonymy to accommodate T. coomani, T. mirabilis n. comb. and the species which is newly described in this article, T. intermedius n. sp. The monotypic genus Pseudogousa Tinkham, 1937 and its species P. sinensis Tinkham, 1937 are synonymized with Tricondylomimus and T. mirabilis, respectively. The genus Tricondylomimus is placed in Iridopterygidae, while Nemotha is transferred to Hymenopodidae: Anaxarchini.     

双齿锤角叶蜂研究及亚洲锤角叶蜂科分属检索表

根据模式标本和新采集的标本,重新描述了齿锤角叶蜂属和双齿锤角叶蜂Odontocimbex svenhedini Malaise, 1934,其中双齿锤角叶蜂的雌虫是首次报道。简要讨论了齿锤角叶蜂属Odontocimbex 和锤角叶蜂属Cimbex Olivier、壮锤角叶蜂属 Palaeocimbex Semenov以及毛锤角叶蜂属Trichiosoma Leach的区别。重新指定了双齿锤角叶蜂Odontocimbex svenhedini Malaise的正选模。编制了锤角叶蜂科亚洲分布属分属检索表。     

RFLP analysis of cpDNA in the genus <Emphasis Type="Italic">Hypericum</Emphasis>

The chloroplast DNA of 43 species including 16 sections from the genus Hypericum was studied by PCR-RFLP analysis. The PCR-amplified products of four cpDNA regions, trnC-trnD, psbC-trnS, trnL-trnF and rbcL were digested with four restriction endonucleases. A high level of interspecific variation was detected while intraspecific diversity was not observed. The resulting parsimony analysis indicated the monophyletic assemblage of the sections Androsaemum, Olympia, Drosocarpium and Trigynobrathys. Monophyly of Hypericum is weakly supported, but close relationships of H. perforatum and H. maculatum are indicated. The members of Ascyreia are weakly resolved, but clustering of H. kouytchense and H. oblongifolium is well supported, however, H. reptans is nested with Olympia. CpDNA profiles and the positions on the parsimony tree indicate that the chloroplast donor among the putative parents of the hybrid species H. ×inodorum is H. androsaemum.     

A review of the Tandanicolinae (=Monodhelminthinae) (Digenea: Fellodistomidae), with a description of Prosogonarium angelae n. sp.

The Tandanicolinae is reviewed, redefined and considered a subfamily of the Fellodistomidae. The Monodhelminthinae Dollfus, 1937, Mehratrematinae Srivastava, 1939, Prosogonariinae Mehra, 1963 and Buckleytrematinae Yamaguti, 1971 are synonyms of the Tandanicolinae. Genera included in the Tandanicolinae are Tandanicola, Monodhelmis, Buckleytrema and Prosogonarium. Burnellus and Mehratrema are made new synonyms of Monodhelmis. The composition of each genus is reviewed. Monodhelmis arii Yamaguti, 1952, Mehratrema arii Gu & Shen, 1979, Mehratrema dollfusi Srivastava, 1939, Monodhelmis philippinensis Velasquez, 1961, Mehratrema polynemusinis Chauhan, 1943 and Mehratrema skrjabini Karyakarte, 1969 are considered synonyms of Monodhelmis torpedinis. Monodhelmis elongatus Bilqees, 1970 is considered a species inquirenda. Prosogonarium angelae n. sp. is described from Euristhmus lepturus from Moreton Bay, Queensland. It is distinguished by the number and distribution of the vitelline follicles and the extent of the caeca. New records are given for Monodhelmis torpedinis from Arius graeffei and E. lepturus, M. trichofurcata from Tandanus tandanus, and Buckleytrema indica from A. graeffei, all from southern Queensland. Buckleytrema indica is redescribed and B. postacetabulorchis is synonymised with that species. Relationships within the Tandanicolinae were considered by cladistic analysis.     

The first report of Aelurostrongylus falciformis in Norwegian badgers (Meles meles)

The first report of Aelurostrongylus falciformis (Schlegel 1933) in Fennoscandian badgers is described. Routine parasitological examination of nine Norwegian badgers, at the National Veterinary Institute during 2004 and 2005, identified A. falciformis in the terminal airways of five of the animals. The first stage larvae (L1) closely resembled, in size and morphology, those of Angiostrongylus vasorum (Baillet 1866). The diagnosis for both A. falciformis and A. vasorum is frequently based on the identification of L1 in faeces or sputum. The potential for misclassification of an A. falciformis infection as A. vasorum, where larval identification is the only diagnostic method used, is discussed.     

Lavinipes Cheminii Ichnogen., Ichnosp. nov., A Possible Sauropodomorph Track from the Lower Jurassic of the Italian Alps

A new ichnotaxon is described from the Lower Jurassic (Upper Hettangian-Lower Sinemurian) carbonate tidal flats on the central-eastern Italian Alps. The narrow-gauge trackway is that of a large quadrupedal dinosaur. The pes is functionally tetradactyl with three rounded antero-medially directed digits, and the manus is pentadactyl. This quadrupedal form is close to Otozoum and Pseudotetrasauropus jaquesi both traditionally related to sauropodomorph trackmakers. The similarity with Otozoum is so marked that Lavinipes and Otozoum could be cogeneric. But the overall evidence today is that the Otozoum trackmaker was generally bipedal, whereas the trackmaker of L. cheminii is fully quadrupedal. The manual prints of L. cheminii show five short clawless digits and are different from the tetradactyl slender toed manual prints of Otozoum. The possible sauropodomorph affinity of the L. cheminii trackmaker is here discussed with an attempt to a revision of the Late Triassic-Jurassic tracks which have been traditionally related to sauropod and prosauropod.     

Carapichea guianensis: the correct name for Psychotria carapichea (Rubiaceae), with a correction on the authority of P. carapichea, and a new combination in Carapichea

The correct name forPsychotria carapichea isCarapichea guianensis. Also, the authority ofPsychotria carapichea was previously incorrectly cited, because of an oversight of the illegitimacy ofTapogomea carapichea Poir. The complex taxonomic history of this species is analyzed, and the authority of the binomial is correctly cited. In addition,P. ligularis, which was treated as closely related toC. guianensis in previous publications, is transferred toCarapichea and it is now known asCarapichea ligularis.     

Morphometric and molecular (RAPD) analysis of six <Emphasis Type="Italic">Serapias</Emphasis> taxa from Croatia

The morphometric analyses and genetic variability assessed by RAPD markers have been used to analyse relations among six Serapias taxa from Croatia (S. istriaca, S. pulae originally described as hybrid, S. ionica, S. vomeracea, S. lingua and S. cordigera). S. istriaca distributed in southern Istria and the island of Lošinj and S. pulae stenoendemic taxon distributed only in southern Istria S. ionica is endemic to the Ionian and Dalmatian islands, while the remaining taxa are more widely distributed. The obtained results shows that the endemic S. istriaca is a well characterised taxon, that S. pulae is a hybrid between S. istriaca and S. lingua and that the hybrid is morphologically and genetically more similar to S. lingua than the second parental species S. istriaca. The division into the subsections Steno-, Medio- and Platypetalae is founded based on the floral morphology while the division into the sections Serapias and Bilamellaria is not evident in the quantitative morphological and genetic analyses. Furthermore, considerable genetic resemblance between S. vomeracea and S. ionica was established.     

Descriptions of two new and one little known species of the genus Cacopsylla (Hemiptera: Psyllidae) on Sorbus japonica (Rosaceae) and an observation of their biology

Three species of the genus Cacopsylla were collected from Sorbus japonica in Japan. Two of them, Cacopsylla elegans and Cacopsylla sorbicoccinea, are described as new species based on adults and fifth (final) nymphal instars. The third species, Cacopsylla midoriae, is newly transferred from the genus Psylla. The adult of C. midoriae is redescribed and the nymph is described for the first time. A key to the species feeding on S. japonica (adults and nymphs) is provided. The three species were observed to coexist on the same tree of S. japonica in northern Kyushu. Such coexistence of psylloid congeners is uncommon in Japan.     

A new genus of Entiminae from North Africa,supported by a phylogenetic analysis (Coleoptera: Curculionidae: Entiminae)

The genus Holcophloeus gen. nov. is here proposed to include Trachyphloeus cruciatus Seidlitz, 1868, and two new species native to North Africa, based on a phylogenetic analysis and an evaluation of the diagnostic characters. The taxonomic position of Holcophloeus in relation to the tribes Trachyphloeini Lacordaire, 1863, and Holcorhinini Desbrochers, 1898, is discussed, and the new genus is attributed to the Holcorhinini. Holcophloeus laurae sp. nov. from south‐eastern Morocco and Holcophloeus weilli sp. nov. from northern Libya are described and illustrated and a key to the species of the new genus is given. The lectotype of Trachyphloeus cruciatus Seidlitz, 1868, is designated. The genus Massimiellus Borovec, 2009, is transferred from Trachyphloeini to Holcorhinini. © 2013 The Linnean Society of London     

Echidnopsis thulinii sp. nov. (Apocynaceae–Asclepiadoideae) with a review of the infrageneric classification of the genus

Echidnopsis thulinii M. G. Gilbert is described from northern Somalia. The infrageneric classification of Echidnopsis Hook. f. is reviewed in the light of recently published molecular phylogenies. The new species belongs to E. sect. Echidnopsis and a key to the species of this section is provided. A lectotype, supported by an epitype, is designated for E. virchowii K. Schum. Echidnopsis sect. Profundicoronata Bruyns is included within sect. Vadosicoronata Bruyns and two new sections recognised: E. sect. Pseudopectinaria (Lavranos) M. G. Gilbert, based on the genus Pseudopectinaria Lavranos, and E. sect. Sobolifera M. G. Gilbert. A key is given to the sections of Echidnopsis.     

Molecular evidence for the phylogenetic position ofHanabusaya asiatica Nakai (Campanulaceae), an endemic species in Korea

The phylogenetic relationship of the Korean endemic genus,Hanabusaya, to other campanulaceous genera has been controversial since it was described by Nakai in 1911. Three genera of Campanuloideae,Symphyandra, Adenophora, andCampanula, have been considered closely related by various taxonomists on the basis of anther shape, gross morphology, and pollen characters, respectively. We have tested these competing taxonomic hypotheses using the internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA from 12 taxa representing 7 genera of Campanulaceae. The molecular phylogeny indicates strongly thatHanabusaya is more closely allied toAdenophora than toCampanula orSymphyandra. The phylogenetic affinity ofHanabusaya andAdenophora is supported by a 100% bootstrap value and a high decay index (13). The average sequence divergence value (Kimura’s 2-parameter method) betweenHanabusaya and theAdenophora species is 2.58. The value is significantly (about ten times) lower than the ones observed betweenHanabusaya and the species ofCampanula (average of 23.52) and betweenHanabusaya andSymphyandra (24.95). The ITS sequence phylogeny suggests that some morphological characters, such as fused anthers and corolla shape, are homoplastic in the Campanulaceae genera.     

The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment

The size distributions of deletions, insertions, and indels (i.e., insertions or deletions) were studied, using 78 human processed pseudogenes and other published data sets. The following results were obtained: (1) Deletions occur more frequently than do insertions in sequence evolution; none of the pseudogenes studied shows significantly more insertions than deletions. (2) Empirically, the size distributions of deletions, insertions, and indels can be described well by a power law, i.e., f _k = Ck ^–b , where f _k is the frequency of deletion, insertion, or indel with gap length k, b is the power parameter, and C is the normalization factor. (3) The estimates of b for deletions and insertions from the same data set are approximately equal to each other, indicating that the size distributions for deletions and insertions are approximately identical. (4) The variation in the estimates of b among various data sets is small, indicating that the effect of local structure exists but only plays a secondary role in the size distribution of deletions and insertions. (5) The linear gap penalty, which is most commonly used in sequence alignment, is not supported by our analysis; rather, the power law for the size distribution of indels suggests that an appropriate gap penalty is w _k = a + b ln k, where a is the gap creation cost and blnk is the gap extension cost. (6) The higher frequency of deletion over insertion suggests that the gap creation cost of insertion (a _i ) should be larger than that of deletion (a _d ); that is, a _i – a _d = In R, where R is the frequency ratio of deletions to insertions. Correspondence to: W.-H. Li