中枢神经蛋白质组分析中双向电泳技术的建立

建立和优化了中枢神经组织蛋白质组分析所需的双向电泳及相关技术.由于中枢神经组织结构的特殊性,样品处理非常困难.对样品液组成、样品处理、上样方式、上样量、IPG胶条和SDS-聚丙烯酰胺凝胶电泳染色方法和保存等相关技术进行了比较研究和条件优化后,以固相pH梯度等电聚焦为第一向和SDS均一胶（T=12.5%）的水平电泳为第二向,成功地得到了神经组织双向电泳图谱.     

应用电泳滴定曲线预测离子交换层析法的最佳pH条件

电泳滴定曲线(Electrophoretic TitrationCurve,ETC)是近年引人注目的一项新技术.它组合等电聚焦-电泳技术进行制备,即在含有两性电解质的聚丙烯酰胺(PAA)胶板上,经预聚焦形成pH梯度后,胶板转90度再经一次电泳,使样品蛋白质按其表面电荷的性质和密度在pH梯度中迁移泳动形成ETC. ETC的分辨力高,可用于蛋白质的纯度检测,包括单一氨基酸或蛋白质突变体;用于蛋白质表面电荷特性和等电点的检测;用于选择各     

介绍一种等电点聚焦的新方法——固化pH梯度等电点聚焦

P.G.Righetti提出了固化pH梯度等电点聚焦(Isoelectric focusing in immobiline pH gradients)。此法灵敏度高、分辨率好。主要原理是采用一类丙烯酰胺的衍生物,它们的缓冲基团共价结合在丙烯酰胺的基质上。为了在丙烯酰胺胶上形成pH梯度,需有一套缓冲单体,这类化学物质称为固化剂(immobiline),与两性载体ammpholine类似。它所形成的pH梯度需计算,与丙烯酰胺梯度胶一样,只是不改变丙烯酰胺浓度,而是改变两种固化剂的量,把胶液调到所需的pH梯度。用一个双桶梯度混合仪线性混合,同时加入     

应用电泳滴定曲线预测离子交换层析法的最佳pH条件

电泳滴定曲线(Electrophoretic Titration Curve,ETC)是近年引人注目的一项新技术。它组合等电聚焦-电泳技术进行制备,即在含有两性电解质的聚丙烯酰胺(PAA)胶板上,经预聚焦形成pH梯度后,胶板转90度再经一次电泳,使样品蛋白质按其表面电荷的性质和密度在pH梯度中迁移泳动形成ETC。 ETC的分辨力高,可用于蛋白质的纯度检测,包括单一氨基酸或蛋白质突变体;用于蛋白质表面电荷特性和等电点的检测;用于选择各     

用固相pH梯度等电聚焦分析Gc蛋白亚型

用固相pH梯度等电聚焦技术及免疫固定技术对201名北京地区无关汉族群体的人血清Gc蛋白亚型进行了分型鉴定及基因频率的调查.Gc^1F为0.3698.Gc^1S为0.2812.Gc²为0.3490.观察值与期望值吻合良好(Σx²=1.057,P＞0.70)     

聚丙烯酰胺凝胶等电聚焦

等电聚焦也曾称为等电点分离、等电点划分、等电点分析、聚焦电泳等。1966年瑞典学者Vesterberg和Svernsson首先合成了两性载体电解质,并成功地用于肌红蛋白分离,使这方法具有实用价值。等电聚焦的先决条件就是要求有稳定的pH梯度。按照支持pH梯度的介质不同,可     

不吸水链霉菌葡萄糖异构酶的物化表征

葡萄糖异构酶是一种催化葡萄糖异构为果糖的酶。本文用紫外吸收光谱、红外光谱、氨基酸组分分析、聚丙烯酰胺凝胶梯度电泳、SDS-聚丙烯酰胺凝胶电泳、超薄 层聚丙烯酰胺凝胶等电聚焦电泳技术研究了不吸水链霉菌嗜热亚种M1033菌株产生的葡萄糖异构酶的一些物化性质。结果表明由本实验室制备的均一葡萄糖异构酶的A₂₈₀与A₂₆₀的比值是1.76。它是由一个亚单位组成的酶分子。最小分子量是49000。pI值是5.2。氨基酸组分与其它来源的葡萄糖异构酶的氨基酸组分相比较有一些差异,其中Glu,Gly,ALa和Leu的含量都此其它异构酶的高,而Met,Trp,Asp,Thr则比其它葡萄糖异构酶的低。     

电泳用水平聚丙烯酰胺干胶研制成功

聚丙烯酰胺凝胶电泳是快速低廉的生化分析技术。由于凝胶具有三维网状结构,电泳时兼具有分子筛效应和电荷效应,从而比其他电泳的分辨力大为提高,并在此基础上又发展了ＳＤＳ聚丙烯酰胺电泳、梯度胶电泳和等电聚焦聚丙烯酰胺电泳等技术。除大量用于各种蛋白质分析、分型...     

三种分析水稻F1代幼苗生长过程中酯酶同工酶变化的电泳方法比较

利用聚酯胶片作为凝胶支持物的超薄等电聚焦电泳(UTLIEF)研究水稻F1种子萌发过程中的酯酶同工酶多态性变化的结果表明,UTLIEF相比非变性不连续聚丙烯酰胺电泳(native-PAGE)和常规等电聚焦电泳(IEF)得到的酯酶同工酶图谱更清晰,酶带数目和强弱的多态性变化更高,用pH 2～9的两性电解质时等电聚焦的电泳效果较好.     

蛋白质组阵列技术的现状与展望

蛋白质组就是展示一个细胞或组织或机体的全部蛋白质。目前双向凝胶电泳特别是固相pH梯度等电聚焦的双向聚丙烯酰胺凝胶电泳,是分离阵列蛋白质组成分的核心技术,但仍存在诸多不足,通过改善蛋白溶解、阵列策略和蛋白斑点的探测技术,使蛋白质组阵列技术取得了进展。     

Characterization of amino-acid transport in Ricinus communis roots using isolated membrane vesicles

The mechanism and specificity of amino-acid transport at the plasma membrane of Ricinus communis L. roots was investigated using membrane vesicles isolated by phase partitioning. The transport of glutamine, isoleucine, glutamic acid and aspartic acid was driven by both a pH gradient and a membrane potential (internally alkaline and negative), created artificially across the plasma membrane. This is consistent with transport via a proton symport. In contrast, the transport of the basic amino acids, lysine and arginine, was driven by a negative internal membrane potential but not by a pH gradient, suggesting that these amino acids may be taken up via a voltage-driven uniport. The energized uptake of all of the amino acids tested showed a saturable phase, consistent with carrier-mediated transport. In addition, the membrane-potential-driven transport of all the amino acids was greater at pH 5.5 than at pH 7.5, which suggests that there could be a direct pH effect on the carrier. Several amino-acid carriers could be resolved, based on competition studies: a carrier with a high affinity for a range of neutral amino acids (apart from asparagine) but with a low affinity for basic and acidic amino acids; a carrier which has a high affinity for a range of neutral amino acids except isoleucine and valine, but with a low affinity for basic and acidic amino acids; and a carrier which has a higher affinity for basic and some neutral amino acids but has a lower affinity for acidic amino acids. The existence of a separate carrier for acidic amino acids is discussed.Abbreviations PM plasma membrane - TPP⁺ tetraphenylphosphonium ion - pH pH gradient - membrane potential This work was supported by the Agricultural and Food Research Council and The Royal Society. We would like to thank Mrs. Sue Nelson for help with some of the membrane preparations.     

Evaluation of differences between dual salt‐pH gradient elution and mono gradient elution using a thermodynamic model: Simultaneous separation of six monoclonal antibody charge and size variants on preparative‐scale ion exchange chromatographic resin

The efficiencies of mono gradient elution and dual salt‐pH gradient elution for separation of six mAb charge and size variants on a preparative‐scale ion exchange chromatographic resin are compared in this study. Results showed that opposite dual salt‐pH gradient elution with increasing pH gradient and simultaneously decreasing salt gradient is best suited for the separation of these mAb charge and size variants on Eshmuno^® CPX. Besides giving high binding capacity, this type of opposite dual salt‐pH gradient also provides better resolved mAb variant peaks and lower conductivity in the elution pools compared to single pH or salt gradients. To have a mechanistic understanding of the differences in mAb variants retention behaviors of mono pH gradient, parallel dual salt‐pH gradient, and opposite dual salt‐pH gradient, a linear gradient elution model was used. After determining the model parameters using the linear gradient elution model, 2D plots were used to show the pH and salt dependencies of the reciprocals of distribution coefficient, equilibrium constant, and effective ionic capacity of the mAb variants in these gradient elution systems. Comparison of the 2D plots indicated that the advantage of opposite dual salt‐pH gradient system with increasing pH gradient and simultaneously decreasing salt gradient is the noncontinuous increased acceleration of protein migration. Furthermore, the fitted model parameters can be used for the prediction and optimization of mAb variants separation in dual salt‐pH gradient and step elution. © 2018 American Institute of Chemical Engineers Biotechnol. Prog., 34:973–986, 2018     

Transport of Catecholamines by Native and Reconstituted Rat Heart Synaptic Vesicles

Highly purified “heavy” synaptic vesicles were isolated from rat heart by differential centrifugation. Because of the high intravesicular concentrations of proteins, catecholamine, and ATP, resealed vesicle ghosts were prepared and used to study the detailed kinetics of catecholamine transport. ATP stimulated the uptake of /-norepinephrine and was saturable with a K_m for l-norepinephrine at 3.3 μM and 1.8 mM for ATP. The ghosts also accumulated 5-hydroxytryptamine and l-epinephrine via an ATP-dependent mechanism. Uptake was stereospecific for the l-form. A functional catecholamine transporter could be solubilized by the detergent octyl-glucoside and incorporated into phospholipid vesicles, which, after detergent removal, generated proteoliposomes that accumulated l-norepinephrine. Reserpine- and l-propranolol-sensitive accumulation against a concentration gradient is achieved by artificially creating a pH gradient across the membrane, and lends further support to the idea that at least the initial phase of catecholamine transport is driven by the trans-membrane pH gradient created by the proton-translocating ATPase.     

Transport of phenylalanine into vacuoles isolated from barley mesophyll protoplasts

The energy-dependent transport of phenylalanine into isolated vacuoles of barley (Hordeum vulgare L.) mesophyll protoplasts has been studied by silicone-layer floatation filtering. The uptake of this aromatic amino acid into the vacuolar compartment is markedly increased by MgATP, showing saturation kinetics; the K _m values were 0.5 mM for MgATP and 1.2 mM for phenylalanine. V _max for phenylalanine transport was estimated to 140 nmol phenylalanine·(mg·Chl)^-1·h^-1. The transport shows a distinct pH optimum at 7.3 and is markedly inhibited by 40 mM nitrate. Azide (1 mM) and vanadate (400 M) had no or little effect on rates of transport while p-fluorophenylalanine seemed to be an effective inhibitor, indicating a possible competition at an amino-acid carrier. Ionophores such as valinomycin, nigericin or gramicidin were strong inhibitors of phenylalanine transport, indicating that this process is coupled to both the transmembrane pH gradient (pH) and the transmembrane potential ().Abbreviations and symbols BSA bovine serum albumin - Chl chlorophyll - Hepes 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid - pH transmembrane pH gradient - transmembrane potential     

Sucrose uptake into vacuoles of sugarcane suspension cells

Uptake of sucrose into vacuoles of suspension cells of Saccharum sp. (sugarcane) was investigated using a vacuole-isolation method based on osmotic- and pH-dependent lysis of protoplasts. Vacuoles took up sucrose at high rates without the influence of tonoplast energization on sucrose transport. Neither addition of ATP or pyrophosphate nor dissipation of the membrane potential or the pH gradient by ionophores changed uptake rates appreciably. Generation of an ATP-dependent pH gradient across the tonoplast was measured in vacuoles and tonoplast vesicles by fluorescence quenching of quinacrine. No H⁺ efflux could be measured by addition of sucrose to energized vacuoles or vesicles so that there was no evidence for a sucrose/H⁺ antiport system. Uptake rates of glucose and other sugars were similar to those of sucrose indicating a relatively non-specific sugar uptake into the vacuoles. Sucrose uptake was concentration-dependent, but no clear saturation kinetics were found. Strict dependence on medium pH and inhibition of sucrose transport by p-chloromercuriphenylsulfonic acid (PCMBS) indicate that sucrose uptake into sugarcane vacuoles is a passive, carrier-mediated process.Abbreviations FCCP carbonylcyanide-p-trifluoromethoxyphenylhydrazone - Mes 2-(N-morpholino)ethanesulfonic acid - Mops 3-(N-morpholino)propanesulfonic acid - PCMBS p-chloromercuriphenylsulfonic acid - PPi pyrophosphate This research was supported by the Deutsche Forschungsgemeinschaft. The technical assistance of H. Schroer is gratefully acknowledged.     

9-Aminoacridine, a fluorescent probe of the thiamine carrier in yeast cells

The uptake of 9-aminoacridine is studied in the yeast Saccharomyces cerevisiae by fluorescence and absorbance measurements of the dye. Uptake of the dye proceeds via two pathways. One pathway consists of a diffusion of the non-protonated form. At high pH (7.5) this pathway is the predominant one, and the dye distributes between the cell inner and the medium according to the ratio of the proton concentrations in the two compartments. In other words, at high pH 9-aminoacridine behaves as a probe of the H⁺ gradient across the yeast cell membrane. At low external pH (4.5) a second pathway is involved. Much greater accumulation ratios for the dye are observed than can be accounted for by the H⁺ gradient across the membrane. The transport system predominantly responsible for the great accumulation of the dye appears to be inducible, to require metabolic energy and to be saturable. This transport system is competitively inhibited by thiamine, and also by dibenzyldimethylammonium and thiaminedisulfide, two specific inhibitors of the thiamine carrier in the yeast. On the other hand, the thiamine uptake by the yeast cells is competitively inhibited by 9-aminoacridine. In addition, uptake of 9-aminoacridine is greatly reduced in the thiamine transport-negative mutant of S. cerevisiae, PT-R2. It is concluded that at low pH 9-aminoacridine is taken up by yeast via the thiamine carrier of the cell and that, consequently, the dye may be applied as a probe of this transport system.     

Intracellular pH of Thermoplasma acidophila

Thermoplasma acidophila, a mycoplasma-like organism, was grown at 56 °C and pH 2. The intracellular pH of this organism is close to neutral as measured by the distribution of a radioactive weak organic acid, 5,5-dimethyl-2,4-oxazolidinedione, across the plasma membrane. The cell can maintain the pH gradient when subjected to heat or to metabolic inhibitors. Our experiments seem to indicate that a major portion of the pH gradient is not maintained by active processes, but rather by a Donnan potential across the cell membrane.     

Bryophyte and vascular plant responses to base-richness and water level gradients in Western Carpathian<Emphasis Type="Italic">Sphagnum</Emphasis>-rich mires

We investigated the importance of water chemistry and water regime for vascular plant and bryophyte species distribution in Western Carpathian mires dominated bySphagnum. Seventy-seven small circle plots distributed across a wide geographical area, a wide range of mineral richness and all possible microtopographical features were sampled in terms of species composition, physical-chemical water properties and water regime during one growing season. Both water chemistry and water regime were found to be important factors for vegetation composition. Bryophytes reflected only one clear gradient, connected to base-richness (pH, conductivity) and maximal water-level, whereas three different environmental gradients determined the occurrence of vascular plants: water-level amplitude, base-richness and an indistinct gradient presumably connected to peat layer thickness. When the entire data set was subjected to DCA ordination, the first resulting axis was governed by the bryophyte subset, whereas the second one was governed by the vascular plant subset. The species density of vascular plants was positively correlated with pH and conductivity. On the contrary, bryophyte species density showed no relationship to environmental factors. We further compared the pH values measured in groundwater and in water squeezed from bryophytes from the same plot; these plots were distributed along the base-richness gradient. Only in the acidic mires did the use of squeezed-water chemistry in the analyses give results similar to the use of groundwater pH. Further, we found thatSphagnum species with a similar response to the base-richness gradient had differentiated niches with respect to the water level gradient and vice versa.Sphagnum contortum andS. warnstorfii exhibiting the same demands for groundwater pH were segregated along the gradient of maximum water level. An analogous pattern was detected for acidophilous speciesSphagnum magellanicum andS. papillosum.     

Sucrose transport in tonoplast vesicles of red beet roots is linked to ATP hydrolysis

Sucrose uptake into tonoplast vesicles, which were prepared from red beet (Beta vulgaris L.) vacuoles isolated by two different methods, was stimulated by MgATP. Using the same medium as for osmotic disruption of vacuoles, membrane vesicles were prepared from tissue homogenates of dormant red beet roots and separated by high-speed centrifugation through a discontinuous dextran gradient. A low-density microsomal fraction highly enriched in tonoplast vesicles could be further purified from contaminating ER vesicles by inclusion of 5 mM MgCl₂ in the homogenization medium. These vesicles were able to transport sucrose in an ATP-dependent manner against a concentration gradient, whereas vesicles from regions of other densities lacked this feature, indicating that ATP stimulation of sucrose uptake took place only at the tonoplast membrane. Sucrose uptake was optimal at pH 7 in the presence of MgATP and could be stimulated by superimposed pH gradients (vesicle interior acidic) in the absence of MgATP, which is consistent with the operation of a sucrose/H⁺-antiporter at the tonoplast. Tonoplast vesicles, obtained in high yield from tissue homogenates of red beet roots, exhibited sugar-uptake characteristics comparable to those of intact vacuoles; these characteristics included similarities in K _m (1.7 mM), sensitivity to inhibitors and specificity for sucrose.Many experiments were carried out at the Experiment Station of the HSPA, Aiea, Hawaii and financed by an NSF grant to Dr. Maretzki and Mrs. M. Thom.     

Determination of isoelectric points in thin-layer isoelectric focusing: The importance of attaining the steady state and the role of CO2 interference

Isoelectric points differing by 1 to 2 pH units are measured for horseradish peroxidase and lactoperoxidase depending upon the technique of isoelectric focusing, namely, the density gradient technique or systems stabilized by either granulated (Sephadex, Bio-Gel) or compact polyacrylamide gels. Conditions standardized for the determination of pI values of selected pH marker proteins proved inadequate for the predominant isoenzyme of horseradish peroxidase which requires an excessively long focusing time to attain the steady state. Carbon dioxide interferes with the determination of pI values >8.2 to 8.3. Thin-layer isoelectric focusing in a CO₂-free atmosphere followed by pH measurements also in a CO₂-free atmosphere, yields for alkaline marker proteins and the predominant peroxidase isoenzyme, pI values in excellent agreement with these found by the density gradient technique. The isoionic point of the predominant peroxidase isoenzyme determined by ion exchange desalting is identical with the isoelectric point found by density gradient and thin-layer isoelectric focusing in a CO₂-free atmosphere.