The Roles of Competition and Disturbance in a Marine Invasion

Two hypotheses for the decline of native species are the superior exploitation of disturbance by exotic species and the competitive displacement of native species by their exotic counterparts. Theory predicts that functional similarity will increase the intensity of competition between native and invasive species. Ecologically important “foundation” species, Zostera marina and other seagrasses have globally declined during the past century. This study used transplant and vegetation removal experiments to test the hypotheses that disturbance and competitive interactions with an invasive congener (Z. japonica) are contributing to the decline of native Z. marina in the northeastern Pacific. Interspecific competition reduced Z. marina and Z. japonica above-ground biomass by 44 and 96%, respectively, relative to intraspecific competition. Disturbance substantially enhanced Z. japonica productivity and fitness, and concomitantly decreased Z. marina performance, effects that persisted two years following substratum disturbance. These results demonstrate that disturbance and competitive interactions with Z. japonica reduce Z. marina performance, and suggest that Z. japonica’s success as an invasive species stems dually from its ability to persist in competition with Z. marina and its positive response to disturbance. These results highlight the importance of understanding the interconnected roles of species interactions and disturbance in the decline of seagrass habitats, and provide a rationale for amending conservation policy in Washington State. In the interest of conserving native eelgrass populations, the current policy of protecting both native and invasive Zostera spp. should be refined to differentiate between native and invader, and to rescind the protection of invasive eelgrass.     

凋落物多样性及组成对凋落物分解和土壤微生物群落的影响

凋落物分解是生态系统营养物质循环的核心过程,而土壤微生物群落在凋落物分解过程中扮演着极其重要且不可替代的角色。随着生物多样性的丧失日益严峻,探讨凋落物多样性及组成对凋落物分解和土壤微生物群落的影响,不仅有助于了解凋落物分解的内在机制,而且可为退化草原生态系统的恢复提供参考。以内蒙古呼伦贝尔草原退化恢复群落中的草本植物为研究对象,依据植物多度、盖度、频度和物种的重要值及其在群落中的恢复程度筛选出排序前4的羊草（Leymus chinensis）、茵陈蒿（Artemisia capillaris）、麻花头（Serratula centauroides）、二裂委陵菜（Potentilla bifurca）的凋落物为实验材料,通过设置3种凋落物多样性水平（1,2,4）,包括11种凋落物组合（单物种凋落物共4种,两物种凋落物混合共6种,四物种凋落物混合共1种）,利用磷脂脂肪酸（PLFA）方法来研究分解60 d后凋落物多样性及组成对凋落物分解和土壤微生物群落的影响。结果表明：（1）凋落物物种多样性仅对C残余率具有显著影响,表现在两物种混合凋落物C残余率显著低于单物种凋落物,而凋落物组成对所观测的4个凋落物分解参数（质量、C、N残余率以及C/N）均具有显著影响;（2）凋落物物种多样性对细菌（B）含量具有显著影响,而凋落物组成对真菌（F）含量具有显著影响,两者对F/B以及微生物总量均无显著影响;（3）冗余分析结果表明凋落物组成与凋落物分解相关指标（凋落物质量、C、N残余率及C/N）和土壤微生物（真菌、细菌含量）的相关关系高于凋落物多样性。（4）进一步建立结构方程模型（Structural Equation Model,SEM）发现,凋落物初始C含量对凋落物质量、C、N残余率及C/N有显著正的直接影响;凋落物木质素含量对凋落物质量、C、N残余率有显著正的直接影响;凋落物初始N含量对N残余率有显著正的直接影响,而对C残余率及C/N有显著负的直接影响;凋落物初始C/N对凋落物质量、N残余率有显著正的直接影响,而对C/N有显著负的直接影响。此外,凋落物初始C、N、木质素含量及C/N均对真菌含量具有显著正影响,并可通过真菌对凋落物质量分解产生显著负的间接影响。以上结果表明该退化恢复区域优势种凋落物分解以初始C、木质素为主导,主要通过土壤真菌影响凋落物的分解进程,这将减缓凋落物的分解速率进而减慢草原生态系统的进程。这些结果为凋落物多样性及组成对自身分解和土壤微生物群落的影响提供了实验依据,也为进一步分析凋落物分解内在机制以及草原生态系统的恢复提供了数据参考。     

Twentyfive years of changes in the distribution and biomass of eelgrass,Zostera marina,in Grevelingen lagoon,The Netherlands

The wax and wane of the eelgrass (Zostera marina L.) population in Grevelingen lagoon (East Atlantic; The Netherlands) has been documented for over 25 years, together with quantitative and semi-quantitative data on environmental variables. The population expanded after the closure of the Grevelingen estuary in 1971, but declined from 4600 ha surface area in 1978 to less than 100 ha in 1993. There is little causal evidence which factors are responsible for the observed dynamics of the population. The incomplete picture emerging from the data is that of an extremely impoverished eelgrass population, living under constant oligo-mesotrophic marine conditions. Both the sexual and the vegetative modes of reproduction are severely stressed by environmental variables, most likely a combination of low temperatures, high salinity, low dissolved silicate and low ammonium concentrations. Survival of the population asks for the restoration of moderate estuarine conditions.Contribution No. 2180 of the Netherlands Institute of Ecology, Nieuwersluis, The Netherlands.     

Mobilifilum chasei: Morphology and ecology of a spirochete from an intertidal stratified microbial mat community

Spirochetes were found in the lower anoxiphototrophic layer of a stratified microbial mat (North Pond, Laguna Figueroa, Baja California, Mexico). Ultrastructural analysis of thin sections of field samples revealed spirochetes approximately 0.25 m in diameter with 10 or more periplasmic flagella, leading to the interpretation that these spirochetes bear 10 flagellar insertions on each end. Morphometric study showed these free-living spirochetes greatly resemble certain symbiotic ones, i.e., Borrelia and certain termite spirochetes, the transverse sections of which are presented here. The ultrastructure of this spirochete also resembles Hollandina and Diplocalyx (spirochetes symbiotic in arthropods) more than it does Spirochaeta, the well known genus of mud-dwelling spirochetes. The new spirochete was detected in mat material cellected both in 1985 and in 1987. Unique morphology (i.e., conspicuous outer coat of inner membrane, large number of periplasmic flagella) and ecology prompt us to name a new free-living spirochete.This article is dedicated to the memory of our dear friend and colleague David G. Chase (1935–1987)     

凋落物多样性及组成对凋落物分解及土壤微生物群落的影响——二氧化碳倍增条件下

受全球变化的影响生物多样性的丧失日益严重,及时了解凋落物物种多样性及其组成如何直接或者通过调节微生物群落来间接影响凋落物分解已经成为生态学领域的热点问题之一。在呼伦贝尔典型草原区,羊草（Leymus chinensis）为原生群落建群种,茵陈蒿（Artemisia capillaris）、麻花头（Serratula centauroides）、二裂委陵菜（Potentilla bifurca）在退化及恢复群落中的多度均较大,本研究以此4种植物的凋落物为研究对象,在两倍于当前大气CO₂浓度（800 μmol/mol）条件下,通过嵌套实验设计来研究凋落物多样性（凋落物组成）对凋落物质量、C、N残余率和残余C/N的影响,并深入分析凋落物初始性质以及土壤革兰氏阳性菌（G⁺）、革兰氏阴性菌（G^-）、细菌（B）、真菌（F）及土壤总微生物磷脂脂肪酸（Phospholipid Fatty Acid,PLFA）含量和F/B对凋落物分解的影响。结果表明：（1）凋落物多样性及组成对凋落物质量、C、N残余率以及残余C/N均具有显著影响;凋落物组成对G⁺ PLFAs含量具有显著影响;（2）冗余分析（Redundancy Analysis,RDA）结果表明凋落物组成对凋落物分解和土壤微生物群落相关指标的影响高于凋落物多样性;（3）结构方程模型（Structural Equation Model,SEM）结果表明凋落物初始木质素含量和初始C/N均对凋落物分解具有显著影响,其中凋落物初始木质素含量起主导作用,其还可通过对土壤真菌PLFAs含量的影响来间接影响凋落物N残余率和残余C/N。所得结果可为大气CO₂浓度升高条件下退化草原生态系统的物质循环特征的预测乃至草原生态系统功能的合理评估提供数据支持。     

Long-term change in water transparency before and after the loss of eelgrass beds in an estuarine lagoon,Lake Nakaumi,Japan

Long-term changes in Secchi disk transparency in Lake Nakaumi, Japan, from 1932 to the present, which includes the periods before and after the loss of eelgrass (Zostera marina L.) beds, were compiled from previous reports. During the first (July 1932–February 1934) and the second (January 1949–November 1950) periods, the mean transparency was greater than 3 m at all observed stations. Data during the third period (July 1954–March 1956) are only available for the station at the center of the lake. The mean transparency during the third period was significantly lower than that of the second period but higher than the mean during the fourth period. This observation suggests that the decrease of transparency occurred during the third period. Because the decline of eelgrass beds in Lake Nakaumi occurred in the mid-1950s, the decrease of transparency most likely resulted from the shift in primary producers from submerged macrophytes to phytoplankton. Although the maximum transparency sometimes exceeded 3 m, mean transparencies during the fourth period (May 1975–December 2003) were less than 2 m at all stations, significantly lower than those during the first and second periods. The shift in the chief primary producer, from benthic macrophytes to phytoplankton, caused a subsequent shift in secondary producers. The opportunistic filter-feeding bivalve Musculista senhousia, regarded as a biofouling species of local fisheries, increased in Lake Nakaumi. The long-term monitoring data of transparency suggested that restoration of submerged aquatic vegetation may be indispensable for the remediation of the lake environment in this shallow eutrophic lagoon.     

Abiotic and microbial decomposition of pre- and post-bloom leaves of water hyacinth (Eichhornia crassipes (mart.) Solms)

Rates of abiotic and microbial decomposition in pre- and post-bloom leaves of water hyacinth are determined under laboratory conditions. Decomposition in all types of hyacinth leaves is dominated by physical leaching in an initial phase of 4 days duration, and later by microbial processes. The largest part of physical leaching takes place within the first 4 h. Thereafter, the weight loss due to physical leaching declines exponentially. The weight loss by microbial decomposition is minimal in the initial phase but increases exponentially in the later phase. Pre-bloom leaves decompose significantly faster than post-bloom leaves, and post-bloom green leaves decompose faster than post-bloom brown leaves. The rate constants of abiotic decomposition are significantly higher in post-bloom leaves as compared with pre-bloom leaves, while microbial decomposition is significantly higher in pre-bloom leaves. After 30 days, the dry mass loss by abiotic and microbial decomposition is 15% and 55%, respectively, in pre-bloom leaves, 33% and 19% in post-bloom green leaves, and 24% and 6% in post-bloom brown leaves.     

Emergent multiple predator effects in an experimental microbial community

Studies on multiple predator effects have typically focused on metazoans. Here we examined the effects of multiple consumers on bacteria. Specifically, we investigated the separate and combined effects of two common bacterivorous ciliates, Colpidium striatum and Paramecium caudatum, on a simple bacterial assemblage. Non-additive multiple predator effects emerged for all bacterial species significantly affected by grazing, where bacterial responses in the two-consumer treatment cannot be predicted by summing the separate effects of the two consumers. Some species showed risk reduction (observed responses less than expected), whereas others showed risk enhancement (observed responses larger than expected). We attributed risk alteration to the interference between the two consumers. Contradictory to theoretical predictions, total bacterial abundance in the two-consumer treatment did not differ from single-consumer treatments and consumer-free controls, due largely to risk reduction and compensatory responses within the bacterial assemblage. Decomposition of particulate organic matter was greater in the two-consumer treatment than the Paramecium single-consumer treatment, but did not differ among other treatments. These results suggest that the presence of multiple consumers may have unexpected impacts on the structure and functioning of bacterial communities.     

黄顶菊对不同入侵地植物群落及土壤微生物群落的影响

为明确不同入侵地植物群落和土壤生态对黄顶菊入侵的反馈机制,选取天津静海(JH)、河北沧州(CZ)、河北衡水(HS)及河南安阳(AY)4个黄顶菊入侵典型区域,研究黄顶菊对不同入侵地植物群落多样性、土壤理化及土壤微生物群落结构的影响,并进一步揭示植物群落、土壤养分和土壤微生物之间的相关关系。结果表明,黄顶菊入侵显著降低了JH、CZ和HS的植物群落多样性指数(P0.05),改变了四个地区的土壤理化性质,显著升高了不同入侵地真菌PLFA的含量、总PLFA的含量、真菌/细菌和革兰氏阴性菌/革兰氏阳性菌(P0.05),降低了土壤微生物的Margalef丰富度指数(P0.05),但均存在地区间差异;RDA和相关分析的结果表明,硝态氮、全氮的含量对植物群落的影响较大,而铵态氮的含量对土壤微生物群落结构的影响较大,除丰富度指数外,植物群落与土壤微生物群落的多样性指数之间存在显著的负相关关系(P0.05)。总之,黄顶菊改变了入侵地植物群落多样性,并且对入侵地土壤理化性质和土壤微生物群落结构产生了显著影响,且存在地区差异。本研究将为更好的理解外来植物的入侵机制及制定相应的防控策略提供理论依据。     

生物炭对温室黄瓜不同连作年限土壤养分和微生物群落多样性的影响

以温室黄瓜连作6年和10年土壤添加质量比为5%生物炭为处理,以不添加生物炭为对照,采用桶栽的方法,研究了生物炭对不同年限连作土壤养分和微生物群落多样性的影响.结果表明: 与连作土壤相比,生物炭处理的连作6年土壤的黄瓜单株产量提高11.4%,连作10年土壤产量提高62.8%.施入生物炭显著降低了2种连作土壤容重,显著提高了有机质、速效磷含量、阳离子交换量(CEC)和pH;显著提高了土壤细菌数量和细菌/真菌,降低了真菌和尖孢镰刀菌数量,使土壤类型由真菌型向细菌型转变,尤其对连作10年土壤作用最为明显,土壤细菌和细菌/真菌分别是未处理的2.00和3.64倍,真菌和尖孢镰刀菌数量分别是未处理的54.8%和55.9%.土壤微生物群落碳源利用分析表明,10年连作土壤施入生物炭可显著提高土壤微生物活性、Shannon指数和均匀度指数,分别是未处理的1.50、2.14和1.31倍,同时显著提高了土壤微生物对糖类、氨基酸类、酚酸类和胺类碳源的利用强度,分别是未处理的1.62、1.81、1.74和1.93倍.相关性分析表明,土壤容重、速效磷含量、CEC和pH 4个指标对微生物群落变化的影响较显著.综上,生物炭通过对连作土壤理化性质及土壤微生物生态系统的改善,优化了黄瓜根区环境,促进了黄瓜产量的提高,缓解了温室黄瓜连作障碍.     

Impact of differential predation potential on eelgrass (<Emphasis Type="Italic">Zostera marina</Emphasis>) faunal community structure

The trophic structure of fauna within eelgrass beds (Zostera marina) was assessed at two sites in Little Egg Harbor, New Jersey, USA during the summer of 1999. Although the sites were similar with respect to both Z. marina shoot density and plant biomass, they differed significantly in the relative distribution of large predatory fish (e.g., Cynoscion regalis, Paralichthys dentatus, Morone saxatilis). Site One, Marsh Elder, was characterized by a significantly greater catch per unit effort for large predators than Site Two, Shelter Island. Gut content analysis provided direct evidence of trophic linking and significant declines between these fish and four of the five most abundant organisms collected in throw traps used to analyze the density of large benthic prey/small predators. The densities of grass shrimp (Palaemonetes spp. Hippolyte zostericola), blue crab (Callinectes sapidus), and small predatory fish (e.g., Syngnathus fuscus, Opsanus spp., Tautoga onitus) were significantly reduced at Marsh Elder, potentially as a direct impact of large predatory fish. In turn, the differences in the density of small predators observed between sites produced either a significant positive or negative effect on the distribution of small benthic prey (e.g., polychaetes, amphipods), resulting in a two-step trophic cascade within the system. Additionally, an analysis of similarities defined each site independently for both large prey/small predators and small benthic prey community structure. Although the mechanism which produced the differences in the distribution of large predatory fish remains unknown, their impact on faunal community structure mediated not only the distribution of their potential prey, but also subsequent lower trophic levels.     

Causes of the eelgrass wasting disease: Van der Werff's changing theories

The 1930's wasting disease among the North Atlantic population of eelgrass,Zostera marina, is still an ecological and historical enigma, despite several attractive theories. Van der Werff investigated the die-back of eelgrass in the thirties in the Dutch Wadden Sea, and he considered the micro-organismLabyrinthula as the possible cause of the disease. In 1980, Grevelingen lagoon, harbouring an extensive population ofZostera marina, experienced a major decline of the area covered by the submerged macrophyte. Speculations about the cause of this dramatic decline induced us to think that the wasting disease had struck again. Van der Werff investigated the Grevelingen population and found bothLabyrinthula and a Chaetophoracean endophytic alga to be presumably responsible for the decline. During the quest for the ultimate cause of the wasting disease the question remains whether both micro-organisms are the cause of the disease or simply an effect of decomposition processes triggered by other factors.     

The decomposition of mangrove litter in a subtropical mangrove forest

Decomposition of Avicennia marina (Forsk.) Vierh. leaf and woody litter (twigs) was studied using litter bag experiments in a subtropical mangrove forest at two tidal levels (high and low) with different inundation regimes and during two seasons (summer and winter). Losses in dry weight were best described by a single exponential model which showed loss rates of both leaves and twigs were significantly higher low down on the shoreline (greater inundation) and in summer. The time (days) required for the loss of half of the initial dry weight (t ₅₀) was summer: high 59, low 44; winter: high 98, low 78. For twigs the values (days) were summer: high 383, low 179; winter; high 1327, low 1207. There is an exponential relationship between leaf litter t ₅₀'s and latitude which indicates the importance of temperature and therefore season, to the dynamics of organic cycling and export in mangrove systems.     

Seagrass beds and intertidal invertebrates: an experimental test of the role of habitat structure

The majority of field experiments have been carried out on relatively small spatial and short temporal scales, but some of the most interesting ecological processes operate at much larger scales. However, large-scale experiments appropriate to the landscape, often have to be carried out with minimal plot replication and hence reduced statistical power. Here, we report the results of such a large scale, un-replicated field experiment on the Mondego estuary, Portugal, which nevertheless provides compelling evidence of the importance of habitat structure for invertebrate community composition and dynamics. In this estuary, seagrass beds have suffered a dramatic decline over the last 20 years, associated with changes in invertebrate assemblages. In addition, the most abundant species in the system, Hydrobia ulvae, displays distinctly different population structures in those sites. The aim of the field experiment was to test the hypothesis that these differences are related to enhanced survival of snails due to protection from avian or fish predators so that they can grow to larger body sizes in the more complex habitat provided by seagrass. We tested this hypothesis through a large-scale experiment using artificial seagrass beds over a 12-month period. Adult snail densities were higher in the artificial bed plots compared to controls. However, these differences emerged only slowly, related to snail growth rate. This suggests that protection from epibenthic predators can have a significant effect on population structure and hence biomass and productivity of key species in this system. However, the invertebrate assemblage in artificial seagrass plots and the natural seagrass bed, remained statistically separate by the end of the experiment. Handling editor: K. Martens     

Bacterial abundance and aerobic microbial activity across natural and oyster aquaculture habitats during summer conditions in a northeastern Pacific estuary

We measured sediment properties and the abundance and aerobic metabolism of microbes in Willapa Bay, Washington, USA, to test the response of sediment microbes to oyster aquaculture. Sites spanned the estuary gradient (practical salinity units ranged from 24 to 30 under seasonally low river flows) and six different low-intertidal habitat types: eelgrass (Zostera marina), unstructured tideflat, oyster hummocks (reefs of Crassostrea gigas), longline oyster aquaculture, hand-picked on-bottom oyster aquaculture, and dredged on-bottom oyster aquaculture. Aerobic metabolism was assessed by sole-source carbon use (SSCU) of 31 carbon sources on Biolog plates. Sediments generally became siltier and more organically enriched into the estuary, but no consistent differences in sediment properties occurred across habitat types. Bacterial cell density tracked organic content. Across the estuary gradient, overall aerobic SSCU increased less steeply than bacterial cell density, possibly as anaerobic metabolism became more important. Across habitats, aerobic SSCU differed significantly in both overall metabolism and diversity of carbon sources. Aerobic metabolism was generally lower for sediment microbes from intertidal on-bottom oyster aquaculture than from eelgrass. Humans indirectly alter microbial activity through biogenic habitats created during aquaculture, but, as has been shown for bivalves more generally, these changes were relatively small, particularly in comparison to sediment changes along estuarine gradients.     

亚热带米老排和杉木细根分解过程中养分与微生物群落组成的变化

对福建南平峡阳林场19年生米老排和杉木人工林的细根进行为期12个月的分解试验,研究不同树种分解过程中养分和微生物群落组成的动态变化,为理解亚热带不同人工林树种地下养分循环过程提供科学依据.结果表明: 米老排细根养分磷(P)、钾(K)初始含量显著高于杉木.分解过程中,两个树种细根P、K含量均显著降低,而细根氮(N)含量显著增加,且杉木细根N含量变化滞后于米老排.在分解过程中,杉木细根镁(Mg)含量无显著变化;米老排细根Mg含量变化显著,且在分解8个月时显著小于杉木.在分解过程中,真菌与细菌比值均显著表现为先升高后降低,且分解12个月时米老排细根真菌/细菌显著高于杉木.冗余分析表明,N(解释37.2%)、K(解释14.5%)含量和C/N(解释14.8%)是影响杉木细根分解过程中微生物群落组成变化的主要养分因子,而Mg(解释35.9%)和K(解释17.6%)含量则是米老排细根分解时影响微生物群落组成的主要养分因子.研究表明,在不同树种中,除了N之外,Mg等其他养分元素也可能是影响根系分解的重要因子.     

长期施肥对新疆灰漠土土壤微生物群落结构与功能多样性的影响

以20a新疆国家灰漠土土壤肥力与肥料效益长期定位试验为平台,采用常规培养法,结合Biolog技术对可培养微生物、生理菌群数量和碳源利用进行测定分析,研究撂荒(CK0)、耕作不施肥(CK)、不同化肥(N、NK、NP、PK、NPK)、化肥配施低量高量有机肥(NPKM1和NPKM2)和秸秆还田(NPKS)等10种处理土壤微生物特征,揭示长期施肥对土壤微生物群落结构与功能多样性的影响。结果表明:(1)可培养微生物:与CK处理相比,CK0处理显著提高了细菌、放线菌和真菌的数量(P0.05),NPKS处理微生物数量则显著降低(P0.05);不同化肥处理的细菌(除PK处理外)、放线菌(除PK和N处理外)数量也有所增加,增幅在8.14%—135.70%和15.30%—44.78%之间;真菌数量(除NK处理外)则有一定幅度的降低;NPKM1和NPKM2处理,微生物数量最高,细菌分别增加了162.20%和173.75%,放线菌增加了34.39%和39.37%,真菌增加了63.33%和488.33%;(2)生理菌群:与CK0相比,CK处理显著提高了自生固氮菌和亚硝化细菌数量(P0.05),显著降低了氨化细菌和纤维素分解菌数量(P0.05);与CK相比,NPKM1和NPKM2处理显著提高土壤中与氮素转化有关的生理菌群数量(P0.05),不同化肥处理和NPKS处理的影响不相同,NPK处理显著高于其余处理(P0.05);(3)微生物碳源利用:微生物活性表现为NK、NPKM1、NPKM2N、NPK、CKPK、NPKSCK0、NP;CK0处理3个多样性指数以及NPKM1、NPKM2和NK处理Shannon(H)指数最高,其余施肥处理差异不显著;糖类、氨基酸类、羧酸类和胺类是微生物利用的主要碳源。(4)聚类分析表明,除NP处理外,施氮处理土壤有较为相似的碳源利用,细菌和真菌与养分之间有较好的相关性,可培养微生物和生理菌群与微生物碳源利用的相关性较差。因此,长期不同施肥对新疆灰漠土土壤微生物群落结构和功能多样性产生了显著的影响,长期耕作不施肥降低了土壤微生物群落结构和功能多样性,不同化肥配合施用对微生物群落的影响不同,NPK及NPK配施有机肥可提高土壤微生物多样性。     

不同恢复阶段热带森林土壤nirS型反硝化微生物群落结构及多样性特征

探明热带森林土壤反硝化微生物群落结构及多样性,对于理解反硝化引起的N₂O排放及缓解全球变暖具有重要意义。本研究以西双版纳3个不同恢复阶段热带森林类型[即白背桐（Mallotus paniculatus,MP）、崖豆藤（Millttia leptobotrya,ML）群落、群落及高檐蒲桃（Syzygium oblatum,SO）群落]为研究对象,揭示土壤nirS型反硝化微生物群落组成及多样性的干湿季变化,分析热带森林恢复过程中土壤理化环境变化对nirS型反硝化细菌群落的影响。结果表明,变形菌门（Proteobacteria）和酸杆菌门（Acidobacteria）相对丰度表现为恢复前期高于恢复后期,而脱氯单胞菌属（Dechloromonas）、嗜盐单胞菌属（Halomonas）和罗思河小杆菌属（Rhodanobacter）表现为恢复后期高于恢复前期;绿弯菌门（Chloroflexi）和放线菌门（Actinobacteria）均随恢复年限增加而增加,而贪铜菌属（Cupriavidus）和假单胞菌属（Pseudomonas）的相对丰度表现为随恢复年限增加而降低。9月份各样地新检测出的属数量表现为：SO （19种） > MP （13种） > ML （7种）。土壤nirS型反硝化微生物群落的Shannon多样性指数表现为：高檐蒲桃群落 > 崖豆藤群落 > 白背桐群落,且9月（湿季） > 3月（干季）。相关分析表明,热带森林恢复引起土壤N库（全氮、NH₄⁺、NO₃^-）、C有效性（微生物量碳、易氧化碳）及微气候（土壤含水率与温度）的改变,能够显著影响nirS型反硝化细菌群落的结构及多样性。主成分分析结果表明,土壤硝态氮、微生物量碳、全氮及易氧化碳是调控不同恢复阶段热带森林土壤nirS型反硝化细菌群落结构及多样性变化的主控因子,其次为土壤水分、温度、水解氮、pH、铵态氮、有机碳、容重及C/N。     

Effects of continuous cucumber cropping and alternative rotations under protected cultivation on soil microbial community diversity

The diversity of soil microbial communities as affected by continuous cucumber cropping and alternative rotations under protected cultivation were evaluated using community level physiological profiles (CLPP) and random amplified polymorphic DNA (RAPD) analysis. The soils were selected from six cucumber cropping systems, which cover two cropping practices (rotation and continuous cropping) and a wide spectrum for cucumber cropping history under protected cultivation. Shannon–Weaver index and multivariate analysis were performed to characterize variations in soil microbial communities. Both CLPP and RAPD techniques demonstrated that cropping systems and plastic-greenhouse cultivation could considerably affect soil microbial functional diversity and DNA sequence diversity. The open-field soil had the highest Shannon–Weaver index (3.27 for CLPP and 1.50 for RAPD), whereas the lowest value occurred in the 7-year continuous protected cultivation soil (3.27 for CLPP and 1.50 for RAPD). The results demonstrated that continuous plastic-greenhouse cultivation and management can cause the reduction in the species diversity of the biota. Higher Shannon–Weaver index and coefficients of DNA sequence similarity were found in soils under rotation than those under continuous cropping. Cluster analysis also indicated that microbial community profiles of continuous cultivation soils were different from profiles of rotation soils. The reduction in diversity of microbial communities found in continuous cultivation soils as compared with rotation soils might be due to the differences in the quantity, quality and distribution of soil organic matter. Section Editor: D. E. Crowley