Ubiquitous distribution of fluorescent protein in muscles of four species and two subspecies of eel (genus <Emphasis Type="Italic">Anguilla</Emphasis>)

In this study, the localization of fluorescent protein (FP) was characterized in the muscles of four species and two subspecies of eels Anguilla anguilla, A. australis, A. bicolor bicolor (b.), A. bicolor pacifica (p.) and A. mossambica in addition to the previously reported A. japonica. The open reading frame of each eel FP was 417 bp encoding 139 amino acid residues. The deduced amino acid sequences among the four species and two subspecies exhibited 91.4–100% identity, and belonged to the fatty-acid-binding protein (FABP) family. The gene structure of eel FPs in A. japonica, A. anguilla, A. australis, A. bicolor b., A. bicolor p. and A. mossambica have four exons and three introns, and were common to that of FABP family. The apo eel FPs expressed by Escherichia coli with recombinant eel FP genes were analysed for the fluorescent properties in the presence of bilirubin. The excitation and emission spectra of holo eel FPs had the maximum wavelengths of 490–496 and 527–530 nm, respectively. The holo eel FPs indicated that the fluorescent intensities were stronger in A. japonica and A. bicolor than in A. mossambica, A. australis and A. anguilla. The comparison of amino acid sequences revealed two common substitutions in A. mossambica, A. australis and A. anguilla with weak fluorescent intensity.     

Mitochondrial and nuclear genetic structure in <Emphasis Type="Italic">Rhodeus ocellatus</Emphasis> (Teleostei: Cyprinidae) with approximate Bayesian computation

The rosy bitterling, Rhodeus ocellatus, is a small freshwater fish belonging to the family Cyprinidae. This species lives in ponds where freshwater mussels are abundant and female lays eggs inside mussels. To understand whether the reproduction mode influenced the phylogeography, our study examined the genetic structure of R. ocellatus using sequences from the mitochondrial DNA (cytochrome b gene and control region) and nuclear DNA (the first intron of ribosomal protein S7 gene). In total, 213 specimens were collected from twelve populations in south of Yangtze River, including Yangtze River, Taiwan and Hainan Islands. The phylogenetic analyses based on mitochondrial and nuclear sequences both showed the lack of a population genetic structure, but all results, including the approximate Bayesian computation approaches, showed that these two markers revealed incongruent historical signals. Our study found that (1) the discordance between these two markers were accounted for admixtures by introduced; (2) the phylogeographic pattern of R. ocellatus and that of other freshwater fish were identical; (3) the reproduction mode was due to that the gene flows among populations were limited; and (4) R. ocellatus colonized in south of the Yangtze River (including) after southeast coastal districts formed and before Taiwan Island reached its present shape by comparing our results with that of the previous studies.     

Interspecific comparison of movement patterns among bitterling species in an agricultural ditch system

Patterns of movement are related to life history and/or species traits. Understanding movement patterns of multiple species sharing the same niche may clarify coexistence mechanisms. Therefore, the movement patterns of three bitterling species, Acheilognathus tabira erythropterus, Acheilognathus melanogaster, and Rhodeus ocellatus ocellatus, were examined between June and November 2009 in an agricultural ditch system associated with Lake Kasumigaura in central Japan. The mark–recapture method was used with a fixed releasing point in an approximately 5.5 km-long ditch. Movement distances of A. t. erythropterus and A. melanogaster were longer than that of R. o. ocellatus, but the direction of movement was similar among the three species. However, R. o. ocellatus moved to locations with a low dissolved oxygen concentration and deeper water. These results suggest that R. o. ocellatus may adapt better to environmental fluctuations, because its tolerance to hypoxia is the highest of the three species. Compared with R. o. ocellatus, A. t. erythropterus and A. melanogaster may move relatively longer distances to search for suitable habitats following an environmental fluctuation.     

Avoidance of host resistance in the oviposition-site preferences of rose bitterling

A contemporary outcome of dynamic host–parasite coevolution can be driven by the adaptation of a parasite to exploit its hosts at the population and species levels (parasite specialisation) or by local host adaptations leading to greater host resistance to sympatric parasite populations (host resistance). We tested the predominance of these two scenarios using cross-infection experiments with two geographically distant populations of the rose bitterling, Rhodeus ocellatus, a fish brood parasite of freshwater mussels, and four populations of their mussel hosts (two Anodonta woodiana and two Unio douglasiae populations) with varying degrees of geographic sympatry and local coexistence. Our data support predictions for host resistance at the species level but no effect of local coexistence between specific populations. Rhodeus ocellatus showed a preference for allopatric host populations, irrespective of host species. Host mussel response, in terms of ejection of R. ocellatus eggs, was stronger in the more widespread and abundant host species (A. woodiana) and this response tended to be higher in sympatric populations. These outcomes provide support for the importance of host resistance in bitterling oviposition-site decisions, demonstrating that host choice by R. ocellatus is adaptive by minimizing egg ejections. These findings imply that R. ocellatus, and potentially other bitterling species, may benefit from exploiting novel hosts, which may not possess appropriate adaptive responses to parasitism.     

Fecundity of the tropical catadromous eels <Emphasis Type="Italic">Anguilla bicolor bicolor</Emphasis>, <Emphasis Type="Italic">A. bengalensis bengalensis</Emphasis> and <Emphasis Type="Italic">A. marmorata</Emphasis>

Maturation is one of the most important ontogenetic transitions in an individual’s life. However, the reproductive ecology of the tropical anguillid eel genus Anguilla at the onset of oceanic spawning migration is poorly understood. To understand the reproductive ecology, the fecundity of the tropical eels Anguilla bicolor bicolor, A. bengalensis bengalensis and A. marmorata was examined using advanced migrating silver eels (Stage IV and V). A close linear relationship was found between total length and fecundity in A. bengalensis bengalensis. The fecundities of A. bicolor bicolor (0.55 to 4.96 × 10⁶), A. bengalensis bengalensis (0.33–1.72 × 10⁶) and A. marmorata (0.99 × 10⁶) were within the range of those observed in temperate eels.     

Diversity of fish species in suichuan river and shushui river and conservation value,China

Based on the data collected from the Suichuan and Shushui Rivers, both tributaries of the Ganjiang River between April and July of 2015, the fish species identified were classified into 68 and 46 species, 14 and 12 families in the Suichuan River and Shushui River respectively. Cyprinidae is the most common family that accounts for 52.9% and 58.7% in the total number of fish species in the Suichuan River and Shushui River, respectively. The dominant species were Pseudohemiculter dispar, Squalidus argentatus, Silurus asotus and Leptobotia elongate for the Suichuan River and Squalidus argentatus, Acrossocheilus parallens, Pseudohemiculter dispar, Silurus asotus, Pelteobagrus fulvidraco, Acrossocheilus fasciatus and Zacco platypus for the Shushui River. The diversity of fish species showed more abundant and diverse for the Suichuan River. The composition of ecotype of fish indicated the rich diversities of ecotype in both the Suichuan and Shushui Rivers. The tributary (Suichuan River) and main stream of the Ganjiang River demonstrated a highly fauna similarity and the fish resources indicated its significance to maintain the fish diversity in the middle of the Ganjiang River and its benefits to the existence of the fish species in mountain streams. Dam construction, sand excavation and heavy metal pollution are the most significant threat to fish diversity and ecosystem functioning in Ganjiang River basin. In order to protect fish diversity and fisheries more effectively, relevant laws should be strengthened and conservation areas should be established for the survival of freshwater fish species.     

Chromosomal locations of U2 snDNA clusters in <Emphasis Type="Italic">Megaleporinus</Emphasis>, <Emphasis Type="Italic">Leporinus</Emphasis> and <Emphasis Type="Italic">Schizodon</Emphasis> (Characiformes: Anostomidae)

The U small nuclear RNA (U snRNA) genes comprise a multigene family and are required for splicing of pre-mRNA. In this paper, we aimed to study the chromosomal location of the U2 snRNA gene in Megaleporinus, Leporinus and Schizodon species, which constitute interesting models for the study of repetitive DNA and genomic evolution in fish once the group comprises species with and without heteromorphic sex chromosomes. The all six species showed 2n?=?54 chromosomes: Megaleporinus elongatus, Megaleporinus macrocephalus, Leporinus striatus, Leporinus friderici, Schizodon borelli and Schizodon isognathus. The U2 snDNA clusters were evident in only one medium-sized submetracentric pair in all analyzed species and this may represent a condition shared by Anostomidae family.     

Locomotor synergies in fish

The kinematic characteristics {f(v), A(v), w(v)} allow a first-approximation representation of locomotor synergies in the swimming of fish: f is the frequency of the transverse oscillations, A is the amplitude of the caudal fin sweep, w is the velocity of the locomotor wave, and v is the locomotion speed. The additional compared characteristics included the step length L(v) and the wavelength λ(v), where L ≡ vT is the distance covered by the fish during the period T ≡ 1/f, and λ ≡ wT. These kinematic characteristics were derived from video recordings of swimming in six fish species. Three of the species investigated belonged to the anguilliform type, while the three others belonged to the carangiform type. The constant value of the wavelength λ at all speeds v was the common feature of the two types. The anguilliform fish performed a oneparameter version of locomotion control: the locomotion speed v changed due to the change of the wave velocity w and the undulatory amplitude remained constant. The carangioid fish used a two-parameter version of control, with changes in both the wave velocity w and the amplitude of undulations of the body and tail fin.     

Depth distribution and abundance of a coral-associated reef fish: roles of recruitment and post-recruitment processes

The abundance of many reef fish species varies with depth, but the demographic processes influencing this pattern remain unclear. Furthermore, while the distribution of highly specialized reef fish often closely matches that of their habitat, it is unclear whether changes in distribution patterns over depth are the result of changes in habitat availability or independent depth-related changes in population parameters such as recruitment and mortality. Here, we show that depth-related patterns in the distribution of the coral-associated goby, Paragobiodon xanthosoma, are strongly related to changes in recruitment and performance (growth and survival). Depth-stratified surveys showed that while the coral host, Seriatopora hystrix, extended into deeper water (>20 m), habitat use by P. xanthosoma declined with depth and both adult and juvenile P. xanthosoma were absent below 20 m. Standardization of S. hystrix abundance at three depths (5, 15 and 30 m) demonstrated that recruitment of P. xanthosoma was not determined by the availability of its habitat. Reciprocal transplantation of P. xanthosoma to S. hystrix colonies among three depths (5, 15 and 30 m) then established that individual performance (survival and growth) was lowest in deeper water; mortality was three times higher and growth greatly reduced in individuals transplanted to 30 m. Individuals collected from 15 m also exhibited growth rates 50% lower than fish from shallow depths. These results indicate that the depth distribution of this species is limited not by the availability of its coral habitat, but by demographic costs associated with living in deeper water.     

The elemental composition of swimbladders in some deepwater fishes of the North Atlantic

The first data on the elemental contents of the swimbladder wall of three deepwater fish species from the North Atlantic (the snubnosed spiny eel Notacanthus chemnitzii, the Kaup’s arrowtooth eel Synaphobranchus kaupii, and the roughhead grenadier Macrourus berglax) are presented. It is supposed that survival of specimens of the first two species upon their ascent from great depths that subject them to sharp changes of pressure is connected with the properties of the durable and flexible swimbladder walls with increased contents of some metals (aluminum, copper, iron, mercury, potassium, manganese, chromium, and cadmium). Adaptation to sharp changes of pressure in N. chemnitzii and S. kaupii probably develops during ontogeny, during the transition from habitation in the epipelagic zone during the larval stage to the deepwater habitat of the adult fish.     

Rare species of cyclostomata and fish in the Upper Oka basin and within Kaluga oblast

The species list of fish of the Upper Oka basin is verified. Data on biology of rare species are presented (western brook lamprey Lampetra planeri, sterlet Acipenser ruthenus, bystryanka Alburnoides bipunctatus rossicus, asp Aspius aspius, undermouth Chondrostoma variabile, bitterling Rhodeus sericeus, and fresh-water sculpin Cottus gobio koshewnikowi). Their morphological characters, distribution in the Upper Oka basin relative abundances of these species, and its changes during recent decades are also commented.     

Findings of new and rare fish species in the coastal zone of the Crimea (the Black Sea)

Characteristics of seven Atlantic-Mediterranean fish species are provided. Of them, four (gobies—yellow-headed Gobius xanthocephalus and red-mouthed G. cruentatus, incognito blenny Parablennius incognitus, and greater pipefish Syngnathus acus) were either first found in the Black Sea coastal zone of the Crimea, or their findings were doubted, and three species (thin-lipped grey mullet Liza ramada, European barracuda Sphyraena sphyraena, and Black Sea salmon Salmo trutta labrax) are very rare. Over the last decade, the authors recorded 15 fish species; of them, seven Atlantic-Mediterranean species have dispersed along the Crimean coasts by now, one endemic of the far eastern seas (chameleon goby Tridentiger trigonocephalus) has naturalized in Sevastopol Bay, four invading species, freshwater by origin, permanently occur in the estuary zones of the peninsula; the remaining three species are known from single findings and apparently belong to the category of accidental fish. An increase in the species composition of ichthyofauna off the Black Sea coasts of the Crimea results from the on-going process of mediterranization—the invasion in the estuary of freshwater tolerant species at the expense of accidental species that penetrated here either independently or with ballast waters.     

Genotypic characterization of Lactic acid bacteria in gut microbiome of freshwater fish

The present study focused on identification and genotypic characterization of Lactic acid bacteria (LAB) in the intestine of freshwater fish. 76 strains of LAB were isolated and identified by 16S rRNA gene sequences and hsp60 gene sequences as different strains of Lactobacillus plantarum, Lactobacillus pentosus, Lactobacillus fermentum, Lactobacillus delbrueckii subsp. bulgaricus, Lactobacillus brevis, Lactobacillus reuteri, Lactobacillus salivarius, Pediococcus pentosaceus, Pediococcus acidilactici, Weissella paramesenteroides, Weissella cibaria, Enterococcus faecium, and Enterococcus durans. The hsp60 gene showed a higher level of sequence variation among the isolates examined, with lower interspecies sequence similarity providing more resolutions at the species level than the 16S rRNA gene. Phylogenetic tree derived from hsp60 gene sequences with higher bootstrap values at the nodal branches was more consistent as compared to phylogenetic tree constructed from 16S rRNA gene sequences. Closely related species L. plantarum and L. pentosus as well as species L. delbrueckii subsp. bulgaricus and L. fermentum were segregated in different cluster in hsp60 phylogenetic tree whereas such a distribution was not apparent in 16S rRNA phylogenetic tree. In silico restriction analysis revealed a high level of polymorphism within hsp60 gene sequences. Restriction pattern with enzymes AgsI and MseI in hsp60 gene sequences allowed differentiation of all the species including closely related species L. plantarum and L. pentosus, E. faecium and E. durans. In general, hsp60 gene with higher evolutionary divergence proved to be a better phylogenetic marker for the group LAB.     

Distribution and abundance of fish in the southwest of Caspian Sea coastal waters

This study was carried out in southwestern Caspian Sea coastal area to elucidate demersal bony fishes distribution and abundance. Twenty two species were found in shore line, which belong to 6 families. In deeper waters down to 7 meters only 5 species of Gobiidae and 1 species of Syngnathidae were identified. Two species Neogobius caspius and N. pallasi were the main components of demersal fishes; however in some regions Rutilus caspicus, Rutilus kutum and Liza spp. were dominated. Most places were dominantly occupied by Atherina boyeri, which had the highest abundance among the pelagic fishes. Conversely, the Ponticola gorlap, N. melanostomus and Proterorhinus nasalis showed the lowest abundances (less than 1 ind./100 m²). Benthophilus stellatus and P. nasali had the lowest niche overlaps with other species. Both of these two species and P. gorlap are suggested to be classified as endangered or vulnerable species based on their low abundance. The distribution of Syngnathus abaster depends on algae, while algae grow up into the stony construction of the coastal line. A negative insignificant correlation was observed between pelagic and demersal fish abundances. The commercial fisheries data of 76 beach seines in our study area during 2002–2013 was compared with our results on fish abundance and species composition. More than 93% of total fish catch constituted Liza spp. and Rutilus kutum. The relationship between the abundance and distribution of the studied species, and the restocking activities performed by Iranian fisheries organization are discussed. The high abundance and distribution of small size fish in tidal zone could be related to the distribution of crustacean, which provide a good source of food for these fish species.     

Feeding of pelagic fish in waters of Mauritania: 2. Representatives of Families Carangidae,Scombridae, Pomatomidae,and Trichiuridae

Feeding peculiarities of mass pelagic ichtyophagous fish from the Canary upwelling waters and frontal zones of Mauritania have been investigated: vadigo Campogramma glaycos, false scad Caranx rhonchus, bluefish Pomatomus saltatrix, Atlantic bonito Sarda sarda, West African Spanish mackerel Scomberomorus tritor, large-eyed hairtail Trichiurus lepturus and pompano Trachinotus ovatus. These species feed on epipelagic fish living or forming temporary agglomerations at the depths up to 200–250 m from the surface.     

Introgression from non-native species unveils a hidden threat to the migratory Neotropical fish <Emphasis Type="Italic">Prochilodus hartii</Emphasis>

Invasive species are one of the greatest threats to biodiversity, due to competition, predation, pathogen spread, and hybridization. The latter may remain undetected and impair the survival of species, due to genetic admixture and hybrid swarming (i.e., interbreeding between hybrid individuals and backcrossing with parental species). The impact of invasive species remains poorly studied in the Neotropical ichthyofauna, particularly when considering the potential for hybridization between native and introduced species. Due to fisheries importance and its commercial value, species of the Prochilodus genus have been introduced to other catchments in Brazil. Here, we evaluate the introduction of non-native Prochilodus species and the potential effect of hybridization with the native migratory fish P. hartii. To evaluate possible introgression of Prochilodus spp. to P. hartii in the Jequitinhonha river basin (JRB), we employed a morphogenetic approach, analysing 219 specimens sampled from a broad extent of the river basin. Morphological analyses using meristic characters were incongruent with molecular identification by DNA barcoding (COI) in 22.83% of the analysed specimens. Haplotypes from three non-native species (P. argenteus, P. costatus, and P. lineatus) were recovered from specimens morphologically identified as P. hartii. Hybridization between P. hartii and introduced species was confirmed using co-dominant nuclear microsatellite markers. We observed a pronounced introgression pattern in this Neotropical basin, and paradoxically, despite being one of the most abundant migratory species native to the JRB, due to ongoing levels of introgression, P. hartii’s genetic integrity and conservation might be affected.     

Observations on the specific associations found between scyphomedusae and commensal fish and invertebrates in the Philippines

Our observations on scyphomedusae from selected Philippine embayments identified specific animals commensal with five species of rhizostome scyphomedusae, Acromitoides purpurus, Mastigias sp., Phyllorhiza punctata, Rhopilema hispidum and Versuriga anadyomene. Acromitoides purpurus medusae harbor the crab Charybdis feriata, the carangid fish Alepes djedaba and the poecilostomatoid copepod Paramacrochiron sp. The carangid A. djedaba was an associate of the blue morph of A. purpurus and Rhopilema hispidum in Panguil Bay. A black-pigmented Alepes sp. was found associated with burgundy A. purpurus medusae in Carigara Bay. Charybdis feriata juveniles are common commensals of all morphs of A. purpurus, R. hispidum and P. punctata medusae. Only the zooxanthelate Mastigias sp. lacked animal symbionts. We invoke the “meeting-point hypothesis” and the general theory of fish aggregation to floating structures to explain fish symbiosis with their medusan hosts. The invertebrate-medusa associations are attributed to feeding behaviors and predator avoidance by resident commensals. This study provides record of the poorly studied scyphozoan species and their association with animals in Philippine waters. Finally, we discuss the potential reasons why the golden spotted jellyfish, Mastigias sp., appears to lack animal commensals.     

Dynamics of species composition of fish and some results of ichthyomonitoring in the middle course of the Oka (Ryazan oblast)

The dynamics of species composition of fish from the middle course of the Oka is considered. A total of 53 species of Cyclostomata and fish was previously recorded; however, only 43 species have been found at the present time. Due to different causes, ten species have disappeared, and ten new species have emerged. The species composition and structure of aboriginal fish population are characterized by relative stability; however, the total abundance of fish during the current decade, as compared to the 1970s, has considerably decreased. The sterlet Acipenser ruthenus, lake minnow Phoxinus precnurus, Volga zander Sander volgensis, and freshwater sculpin Cottus gobio belong to rare fish.     

Freshwater fish diversity in Algeria with emphasis on alien species

Little is known about freshwater fish diversity in Algeria, especially after the broad national program of introduction of exotic species applied for over 20 years. This paper is an attempt to describe the current situation emphasizing the characteristics of the various introductions of non-autochthonous species, their current status and their possible impacts. The freshwater fish fauna of Algeria is composed of 48 species belonging to 15 families. Twenty-one species are autochthonous, of which, three are endemic (Haplochromis desfontainii, Aphanius saourensis, Aphanius apodus), two are endangered (H. desfontainii, Aphanius iberus), and one is critically endangered (Anguilla anguilla). Twenty-seven species were introduced, of which, 18 never became established and 9 are established. Four species are reported for the first time: Abramis brama, Aspius aspius, Carassius carassius, Perca fluviatilis. Since 1860, 303 introduction events have been recorded at almost 107 different sites in Algeria. The number of introduction events per site was between 1 and 10. Most of the introduced fish are found in Oubéïra Lake (seven species). Aquaculture development was the main reason for fish introductions (37.0%). The five most often introduced species were Cyprinus carpio (86 records), Hypophthalmichthys molitrix (65 records), Aristichthys nobilis (51 records), Oreochromis niloticus niloticus (33 records), and Ctenopharyngodon idella (18 records). Since the adverse effects of introduced fish are risky and demonstrated in several countries, the adoption of the precautionary principle is recommended when new introductions are planned. It is important, therefore, to adopt regulations and procedures which will minimize the risks arising from introductions.