Landscape genetic structure of <Emphasis Type="Italic">Olea europaea</Emphasis> subsp. <Emphasis Type="Italic">cuspidata</Emphasis> in Ethiopian highland forest fragments

Understanding patterns of genetic diversity at the landscape scale will enhance conservation and management of natural populations. Here we analyzed the genetic diversity, population connectivity, and spatial genetic structure among subpopulations and age groups of Olea europaea subsp. cuspidata, a cornerstone species of the Afromontane highlands. The study was conducted at the landscape level within a radius of approximately 4 km, as well as on a fine scale (intensive study plot) of less than 300 m radius. In total 542 samples from four natural subpopulations in northwestern Ethiopia were analyzed using ten nuclear microsatellite markers. Inbreeding was higher in smaller populations. No genetic difference was detected among cohorts of different tree sizes in the intensive studied plot. Average population differentiation was low but significant (F _ST ?=?0.016). Landscape genetic analysis inferred two groups: the most distant subpopulation WE located less than 4 kms from the other three subpopulations formed a separate group. Sixty-four percent of the total migrants were shared among the three latter subpopulations, which are spatially clustered. Immigrants were non-randomly distributed inside of the intensive study plot. Significant spatial genetic structure (SGS) was found both at the landscape scale and in the intensive study plot, and adults showed stronger SGS than young trees. An indirect estimate of 220 m as mean gene dispersal distance was obtained. We conclude that even under fragmentation migration is not disrupted in wild olive trees and that large protected populations at church forests are very important to conserve genetic resources. However, the higher level of inbreeding and evidence for population bottlenecks in the small populations, as well as the persisting heavy pressure on most remaining populations, warrants quick action to maintain genetic diversity of wild olive in the Ethiopian highlands.     

Conservation genetics of the annual hemiparasitic plant <Emphasis Type="Italic">Melampyrum sylvaticum</Emphasis> (Orobanchaceae) in the UK and Scandinavia

Melampyrum sylvaticum is an endangered annual hemiparasitic plant that is found in only 19 small and isolated populations in the United Kingdom (UK). To evaluate the genetic consequences of this patchy distribution we compared levels of diversity, inbreeding and differentiation from ten populations from the UK with eight relatively large populations from Sweden and Norway where the species is more continuously distributed. We demonstrate that in both the UK and Scandinavia, the species is highly inbreeding (global F _IS = 0.899). Levels of population differentiation were high (F’_ST = 0.892) and significantly higher amongst UK populations (F’_ST = 0.949) than Scandinavian populations (F’_ST = 0.762; P < 0.01). The isolated populations in the UK have, on average, lower genetic diversity (allelic richness, proportion of loci that are polymorphic, gene diversity) than Scandinavian populations, and this diversity difference is associated with the smaller census size and population area of UK populations. From a conservation perspective, the naturally inbreeding nature of the species may buffer the species against immediate effects of inbreeding depression, but the markedly lower levels of genetic diversity in UK populations may represent a genetic constraint to evolutionary change. In addition, the high levels of population differentiation suggest that gene flow among populations will not be effective at replenishing lost variation. We thus recommend supporting in situ conservation management with ex situ populations and human-mediated seed dispersal among selected populations in the UK.     

Breeding system,gene dispersal and small-scale spatial genetic structure of a threatened food tree species, <Emphasis Type="Italic">Pentadesma butyracea</Emphasis> (Clusiaceae) in Benin

Pentadesma butyracea Sabine, a rain forest food tree species, plays a vital role in the socio-economic livelihood of some West African rural communities due to its various products. However, its scattered populations are threatened in Benin. Defining appropriate conservation strategies requires a good knowledge of mating patterns and their consequences for population genetics. The outcrossing rate, levels of correlated paternity and fine-scale spatial genetic structure of adults and maternal sibships were estimated for one small population and three large populations in Benin using microsatellite markers. Similar outcrossing rates (88–95%) were found in all populations, showing that P. butyracea is mainly an outbreeding species. We found no evidence of inbreeding depression from a decay of inbreeding with age. The spatial genetic structure within the large populations (Sp statistic?=?0.003–0.038) was consistent with isolation-by-distance expectations, showing that gene dispersal is spatially limited. Limited pollen dispersal is highlighted by the decay of the degree of correlated paternity between sibships with spatial distance. The mean pollen dispersal distance was estimated between 50 m and 450 m, but up to 21% pollen may migrate from external sources. The smallest population displayed slightly higher correlated paternity than the large populations (r _p ?=?0.37 vs. r _p ?=?0.17–0.30). In conclusion, our results suggest that small populations may show a reduction in sire numbers in seed, while the fragmented populations, large and small, are connected through gene flow. There is little inbreeding and no evidence of inbreeding depression.     

Outbreeding depression and breeding system evolution in small,remnant populations of <Emphasis Type="Italic">Primula vulgaris</Emphasis>: consequences for genetic rescue

Many species suffer from anthropogenic habitat fragmentation. The resulting small and isolated populations are more prone to extinction due to, amongst others, genetic erosion, inbreeding depression and Allee-effects. Genetic rescue can help mitigate such problems, but might result in outbreeding depression. We evaluated offspring fitness after selfing and outcrossing within and among three very small and isolated remnant populations of the heterostylous plant Primula vulgaris. We used greenhouse-grown offspring from these populations to test several fitness components. One population was fixed for the pin-morph, and was outcrossed with another population in the field to obtain seeds. Genetic diversity of parent and offspring populations was studied using microsatellites. Morph and population-specific heterosis, inbreeding and outbreeding depression were observed for fruit and seed set, seed weight and cumulative fitness. Highest fitness was observed in the field-outcrossed F1-population, which also showed outbreeding depression following subsequent between-population (back)crossing. Despite outbreeding depression, fitness was still relatively high. Inbreeding coefficients indicated that the offspring were more inbred than their parent populations. Offspring heterozygosity and inbreeding coefficients correlated with observed fitness. One population is evolving homostyly, showing a thrum morph with an elongated style and high autonomous fruit and seed set. This has important implications for conservation strategies such as genetic rescue, as the mating system will be altered by the introduction of homostyles.     

Genetic structure and genetic diversity of the endangered grassland plant <Emphasis Type="Italic">Crepis mollis</Emphasis> (Jacq.) Asch. as a basis for conservation management in Germany

Plant diversity is decreasing mainly through anthropogenic factors like habitat fragmentation, which lead to spatial separation of remaining populations and thereby affect genetic diversity and structure within species. Twenty populations of the threatened grassland species Crepis mollis were studied across Germany (578 individual plants) based on microsatellite genotyping. Genetic diversity was significantly higher in populations from the Alpine region than from the Central Uplands. Furthermore, genetic diversity was significantly positively correlated with population size. Despite smaller populations in the Uplands there were no signs of inbreeding. Genetic differentiation between populations was moderate (F _ST?=?0.09) and no isolation by distance was found. In contrast, large-scale spatial genetic structure showed a significant decrease of individual pairwise relatedness, which was higher than in random pairs up to 50 km. Bayesian analyses detected three genetic clusters consistent with two regions in the Uplands and an admixture group in the Alpine region. Despite the obvious spatial isolation of the currently known populations, the absence of significant isolation by distance combined together with moderate population differentiation indicates that drift rather than inter-population gene flow drives differentiation. The absence of inbreeding suggests that pollination is still effective, while seed dispersal by wind is likely to be impaired by discontinuous habitats. Our results underline the need for maintaining or improving habitat quality as the most important short term measure for C. mollis. For maintaining long-term viability, establishing stepping stone habitats or, where this is not possible, assisted gene flow needs to be considered.     

Pollen dispersal patterns and population persistence in a small isolated population of <Emphasis Type="Italic">Fagus crenata</Emphasis>

The potential of long-distance pollen dispersal and the effects of small population size and population isolation on persistence of Fagus crenata populations were investigated in a small, severely isolated population (the Gofuku-ji population) and two other populations located within 7 km of this population (including 87 adult trees in total). Parentage analysis using 13 microsatellite loci showed that 94 of 100 seedlings derived from seeds collected from the Gofuku-ji population had parent pairs within this population, six had one parent within the population, and four of the six seedlings had alleles that were not detected in any of the three populations, indicating that some pollen is dispersed over distances exceeding 7 km. The estimated expected heterozygosity and effective population size were lower in the Gofuku-ji population than in previously examined large continuous populations. Therefore, levels of genetic diversity within the population may have been reduced by strong genetic drift and limitations of pollen- and seed-mediated gene flow associated with the small size and severe isolation. The contemporary mating pattern estimated at the seedling stage was biased toward outbreeding, which may be explained by possible processes: the level of inbreeding in the adult trees is increased; then, inbreeding frequently occurs but is rarely successful, while outbreeding successfully produces offspring. Additionally, high levels of significant linkage disequilibrium and higher numbers of alleles than expected under mutation–drift equilibrium from analyses of the populations’ evolutionary history suggest that the Gofuku-ji population may have experienced admixture before its severe isolation. Therefore, the persistence of the Gofuku-ji population is being adversely affected by the decrease in population size and severe isolation. Further studies of gene flow via pollen in other populations with various degrees of isolation could enhance our understanding of the effects of population isolation and long-distance pollen dispersal in F. crenata and similar species.     

Using genetic monitoring to inform best practice in a captive breeding programme: inbreeding and potential genetic rescue in the freshwater pearl mussel <Emphasis Type="Italic">Margaritifera margaritifera</Emphasis>

Freshwater pearl mussel (Margaritifera margaritifera) populations are declining in Northern Ireland to the extent that a captive breeding programme was established on the Upper Ballinderry river in 1998. Previous genetic analysis of the hatchery broodstock and their first cohort of offspring showed significant levels of inbreeding (F _IS  = 0.166). The broodstock, which currently numbers ca. 90 individuals, was supplemented with new individual mussels, whilst in 2013, a previously unknown population was discovered on the Lower Ballinderry river. The aim of the present study was to determine whether the rotation of the broodstock has led to a decrease in the levels of inbreeding in the second cohort of juveniles, and to determine whether the new population found in the Lower Ballinderry was genetically distinct from the captive bred population and populations from the Upper Ballinderry, which represent the source of the hatchery broodstock. Genotyping using eight microsatellite markers indicated that levels of inbreeding in the second cohort of captive-bred mussels were high, (F _IS  = 0.629), and were comparable to those sampled from the original cohort and the hatchery broodstock (F _IS  = 0.527 and 0.636 respectively). Bayesian analysis of population structure indicated that the newly discovered Lower Ballinderry population was genetically distinct from the broodstock and its source populations on the Upper Ballinderry. The observed differentiation was primarily due to differences in allele frequencies, and was most likely a result of genetic drift. The occurrence of ten alleles, albeit at low frequency, in the Lower Ballinderry population, including four private alleles, suggests that this new population could be incorporated into the broodstock with the aim of decreasing levels of inbreeding in the future.     

Surviving in isolation: genetic variation,bottlenecks and reproductive strategies in the Canarian endemic <Emphasis Type="Italic">Limonium macrophyllum</Emphasis> (Plumbaginaceae)

Oceanic archipelagos are typically rich in endemic taxa, because they offer ideal conditions for diversification and speciation in isolation. One of the most remarkable evolutionary radiations on the Canary Islands comprises the 16 species included in Limonium subsection Nobiles, all of which are subject to diverse threats, and legally protected. Since many of them are single-island endemics limited to one or a few populations, there exists a risk that a loss of genetic variation might limit their long-term survival. In this study, we used eight newly developed microsatellite markers to characterize the levels of genetic variation and inbreeding in L. macrophyllum, a species endemic to the North-east of Tenerife that belongs to Limonium subsection Nobiles. We detected generally low levels of genetic variation over all populations (H _T = 0.363), and substantial differentiation among populations (F _ST = 0.188; R _ST = 0.186) coupled with a negligible degree of inbreeding (F?=?0.042). Obligate outcrossing may have maintained L. macrophyllum relatively unaffected by inbreeding despite the species’ limited dispersal ability and the genetic bottlenecks likely caused by a prolonged history of grazing. Although several factors still constitute a risk for the conservation of L. macrophyllum, the lack of inbreeding and the recent positive demographic trends observed in the populations of this species are factors that favour its future persistence.     

Contribution of genetics for implementing population translocation of the threatened <Emphasis Type="Italic">Arnica montana</Emphasis>

Ecological restoration programmes aiming at population recovery of imperilled plant species increasingly involve plant translocations. Evaluating the genetic status of seed source and target populations is essential for designing plant translocation protocols and optimizing recovery success. We developed nine polymorphic microsatellite markers and used three plastid markers to investigate genetic variation and structure of the two last large and six small remaining populations of the self-incompatible, clonally-propagating Arnica montana in southern Belgium and bordering France. The aim of the study was to determine the genetic status of these remaining populations and whether the large populations can be used as seed source for translocations. Most small populations maintained high genetic diversity and showed no inbreeding or a heterozygote excess, which may be explained by high genet longevity thanks to clonal propagation, heterosis, inbreeding depression at early development stages and/or no recruitment. Genotypic diversity was low in small populations, with clonal propagation mainly contributing to rosette production. The number of genets, and therefore effective population size, was often very small, restricting compatible mate availability. The situation is therefore more critical than it seems on the field, and bringing new genetic variation is necessary. Although no polymorphism was found in plastid DNA markers, between-population differentiation based on microsatellite markers was moderate, except for very small populations, where it was greater (F_ST?>?0.200). These patterns of differentiation were likely due to genetic drift effects and demographic stochasticity. We recommend using mixed seed material from the two large populations for translocations, and before conducting reinforcements, to first implement crossing experiments and reintroductions of mixed and crossed material in ecologically restored sites to understand the long-term effects of combining genotypes from different locations.     

Genetic evidence of fragmented populations and inbreeding in the Colombian endemic Dahl’s toad-headed turtle (<Emphasis Type="Italic">Mesoclemmys dahli</Emphasis>)

Population fragmentation is one of the most concerning consequences of habitat fragmentation, as small and isolated populations suffer increased genetic drift and inbreeding. However, the extent to which habitat fragmentation leads to population fragmentation depends not only on the landscape structure, but also on the response of organisms to it. This behavioral component makes it difficult to detect population fragmentation even if the habitat is fragmented, unless appropriate tools are used. In this study, we used a molecular approach to evaluate if Dahl’s toad-headed turtle (Mesoclemmys dahli) population was fragmented, given that it occurs in a very restricted area within the most degraded biome of Colombia, the tropical dry forest. We developed a panel of 15 microsatellite loci in order to perform the first genetic assessment of M. dahli across its complete geographic range. We found that M. dahli has significant genetic structure with at least four subpopulations, with surprisingly moderate to high levels of genetic diversity. Despite high levels of genetic diversity, subpopulations are very small (effective population sizes?<?50) and isolated, with little to no contemporary gene flow among them. As a consequence, mating among related individuals has been occurring, and all four populations are showing high degrees of inbreeding. To counteract this threat, we recommend an urgent genetic rescue strategy accompanied by habitat restoration, and advocate for a new conservation status assessment, not based on geographic range, but on adult population size and level of fragmentation.     

Landscape determinants of genetic differentiation,inbreeding and genetic drift in the hazel dormouse (<Emphasis Type="Italic">Muscardinus avellanarius</Emphasis>)

The dispersal process is crucial in determining the fate of populations over time, but habitat fragmentation limits or prevents it. Landscape genetic is an effective tool to assess the degree to which dispersal still occurs in fragmented landscapes. The purpose of this study was to investigate the landscape determinants of genetic differentiation in the hazel dormouse (Muscardinus avellanarius), a forest-dependent species of conservation concern. By comparing subpopulations in a continuous (SLR) and a fragmented (VTH) population, we (i) searched for the presence of Isolation-by-Resistance (IBR); (ii) estimated migration rates; (iii) evaluated the degree of inbreeding and genetic drift, and searched for their landscape determinants. We found an IBR effect in VTH, which heavily hindered the dispersal process. The overall number of migrants among VTH subpopulations was very low (1 per generation, compared to 15 in SLR), although a between-patch displacement of about 4 km along a well-structured hedgerow probably occurred. The inbreeding (F?>?0.2 in most subpopulations) and the genetic drift (four out five subpopulations showed private alleles on several loci, with relatively high frequencies) are of particular concern in VTH. However, they were found to be limited in large patches or in patches connected by hedgerows with a high number of neighbouring patches. As a conservation strategy in the VTH landscape, characterized by small patches, we suggest that the dispersal process among subpopulations is enhanced to sustain a functional metapopulation. For this purpose, an effective ecological network should be created by enhancing the continuity and the internal features of hedgerows.     

Population genetics of <Emphasis Type="Italic">Cedrela fissilis</Emphasis> (Meliaceae) from an ecotone in central Brazil

Cedrela fissilis is an endangered timber species associated with seasonal forests throughout South America. We investigated a population of C. fissilis (PAN) located toward central Brazil to uncover insights on how an ecotone may have shaped the evolutionary history of this species at the local scale. PAN consisted of 18 mother trees and their 283 offspring (18 families), which were genotyped with ten microsatellite loci. We supplemented our dataset with equivalent microsatellite data from 175 specimens representing the east and west lineages of C. fissilis. An array of complementary methods assessed PAN for genetic diversity, population structure, and mating system. In PAN, the gene pool of the east lineage combined with a third (previously unidentified) lineage to form an admixture population. PAN is under inbreeding (Ho?=?0.80 and 0.74, uHe?=?0.85 and 0.82, Ap?=?1.1 and 7.1, F?=?0.06 and 0.10, for mother trees and offspring, respectively). Mother trees were predominantly outcrossing (t_m?=?0.95), with some selfing (1???t_m?=?0.05), and crossing between related individuals (t_m–t_s?=?0.07); they received pollen from few donors (N_ep?=?9). Restricted gene flow within PAN gave rise to a strong population structure, which split the 18 families into six groups. Some mother trees were reproductively isolated. Conservation perspectives are discussed.     

Population viability analysis predicts decreasing genetic diversity in <Emphasis Type="Italic">ex situ</Emphasis> populations of the Itasenpara bitterling <Emphasis Type="Italic">Acheilognathus longipinnis</Emphasis> from the Kiso River,Japan

To conserve endangered species, the maintenance of ex situ captive populations with sustainable genetic diversity is often required, in combination with population viability analysis (PVA). Since 2010, the threatened Itasenpara bitterling Acheilognathus longipinnis lineages in the Kiso region, Japan, have been maintained in ex situ rearing facilities to allow for conservation efforts. In this study, we obtained microsatellite data from DNA extracted from these captive populations to elucidate their genetic diversity and effective population size. The populations of several initial generations indicated a deviation from Hardy–Weinberg equilibrium, probably due to the limited number of extracted founder individuals analyzed. The effective population size of the captive population tended to increase over the course of generations, although the degree of genetic diversity tended to decrease highlighting the concern for the progression of inbreeding. Our prediction based on the PVA suggests that the maintenance of the captive population under the current conditions could lead to extinction of the Itasenpara bitterling in 50 years. In contrast, simultaneously increasing the carrying capacity and individual exchange among populations appears to enhance the effective management of captive Itasenpara bitterling populations.     

Effects of population size on performance and inbreeding depression in <Emphasis Type="Italic">Lupinus perennis</Emphasis>

We investigated the relationships among population size, offspring performance, and inbreeding depression (δ) in Lupinus perennis by examining the effect of population size category (large vs. small) on seed production and offspring performance for three pollination treatments (open pollination, hand crossing and hand selfing). In each of our four pairs of populations, one member of the pair was substantially larger than the other. We then grew seeds from this factorial design (2 sizes × 4 pairs × 3 pollination treatments) in the greenhouse to investigate whether population size affects offspring performance in a common environment, and how small size affects purging of the inbreeding load. Multiplicative performance across four early life-stage components (seed production, seedling emergence, seedling survival and seedling growth) of smaller populations was not significantly lower, although biomass of seedlings declined in smaller populations. Self-pollination reduced seed production, seedling emergence and seedling growth, reflecting substantial inbreeding depression (δ = 0.404 ± 0.043). Population size categories did not consistently differ in levels of inbreeding depression, suggesting that purging of genetic load in smaller populations has been limited, and that all populations still harbor inbreeding load. We also found a significant decrease in log performance with increases in the population inbreeding coefficient. These results indicate that even in seemingly large populations, lupines are susceptible to considerable fitness declines through both inbreeding load within populations, and drift load via genetic erosion and fixation of deleterious alleles between populations.     

Integration of genetic and demographic data to assess population risk in a continuously distributed species

The identification and demographic assessment of biologically meaningful populations is fundamental to species’ ecology and management. Although genetic tools are used frequently to identify populations, studies often do not incorporate demographic data to understand their respective population trends. We used genetic data to define subpopulations in a continuously distributed species. We assessed demographic independence and variation in population trends across the distribution. Additionally, we identified potential barriers to gene flow among subpopulations. We sampled greater sage-grouse (Centrocercus urophasianus) leks from across their range (≈175,000 Km²) in Wyoming and amplified DNA at 14 microsatellite loci for 1761 samples. Subsequently, we assessed population structure in unrelated individuals (n = 872) by integrating results from multiple Bayesian clustering approaches and used the boundaries to inform our assessment of long-term population trends and lek activity over the period of 1995–2013. We identified four genetic clusters of which two northern ones showed demographic independence from the others. Trends in population size for the northwest subpopulation were statistically different from the other three genetic clusters and the northeast and southwest subpopulations demonstrated a general trend of increasing proportion of inactive leks over time. Population change from 1996 to 2012 suggested population growth in the southern subpopulations and decline, or neutral, change in the northern subpopulations. We suggest that sage-grouse subpopulations in northern Wyoming are at greater risk of extirpation than the southern subpopulations due to smaller census and effective population sizes and higher variability within subpopulations. Our research is an example of incorporating genetic and demographic data and provides guidance on the identification of subpopulations of conservation concern.     

Genetic structure and diversity in relation to the recently reduced population size of the rare conifer, <Emphasis Type="Italic">Pseudotsuga japonica</Emphasis>, endemic to Japan

Rare species consisting of small populations are subject to random genetic drift, which reduces genetic diversity. Thus, determining the relationship between population size and genetic diversity would provide key information for planning a conservation strategy for rare species. We used six microsatellite markers to investigate seven extant populations of the rare conifer Pseudotsuga japonica, which is endemic to the Kii Peninsula and Shikoku Island regions that are geographically separated by the Kii Channel in southwest Japan. The population differentiation of P. japonica was relatively high (F_ST = 0.101) for a coniferous species, suggesting limited gene flow among populations. As expected, significant regional differentiation (AMOVA; p?<?0.05) indicated genetic divergence across the Kii Channel. A strong positive correlation between census population size and the number of rare alleles (r?=?0.862, p?<?0.05) was found, but correlations with major indices of genetic diversity were not significant (allelic richness: r?=?0.649, p?=?0.104, expected heterozygosity: r?=?0.361, p?=?0.426). The observed order of magnitude of correlation with three genetic diversity indices corresponded with the theoretically expected order of each index’ sensitivity (i.e., the rate of decline per generation) to the bottleneck event. Thus, features that exhibit a faster response, i.e., the number of rare alleles, would have been subject to deleterious effects of the recent decline in population size, which is presumably caused by the development of extensive artificial plantations of other tree species over the last several decades. Finally, we propose a conservation plan for P. japonica based on our findings.     

Effects of genetic distance on heterosis in a <Emphasis Type="Italic">Drosophila melanogaster</Emphasis> model system

Habitat fragmentation and small population sizes can lead to inbreeding and loss of genetic variation, which can potentially cause inbreeding depression and decrease the ability of populations to adapt to altered environmental conditions. One solution to these genetic problems is the implementation of genetic rescue, which re-establishes gene flow between separated populations. Similar techniques are being used in animal and plant breeding to produce superior production animals and plants. To optimize fitness benefits in genetic rescue programs and to secure high yielding domestic varieties in animal and plant breeding, knowledge on the genetic relatedness of populations being crossed is imperative. In this study, we conducted replicated crosses between isogenic Drosophila melanogaster lines from the Drosophila Genetic Reference Panel. We grouped lines in two genetic distance groups to study the effect of genetic divergence between populations on the expression of heterosis in two fitness components; starvation resistance and reproductive output. We further investigated the transgenerational effects of outcrossing by investigating the fitness consequences in both the F₁- and the F₃-generations. High fitness enhancements were observed in hybrid offspring compared to parental lines, especially for reproductive output. However, the level of heterosis declined from the F₁- to the F₃-generation. Generally, genetic distance did not have strong impact on the level of heterosis detected, although there were exceptions to this pattern. The best predictor of heterosis was performance of parental lines with poorly performing parental lines showing higher hybrid vigour when crossed, i.e. the potential for heterosis was proportional to the level of inbreeding depression. Overall, our results show that outcrossing can have very strong positive fitness consequences for genetically depauperate populations.     

A complex history of introgression and vicariance in a threatened montane skink (<Emphasis Type="Italic">Pseudemoia cryodroma</Emphasis>) across an Australian sky island system

Species endemic to sky island systems are isolated to mountain peaks and high elevation plateaux both geographically and ecologically, making them particularly vulnerable to the effects of climate change. Pressures associated with climate change have already been linked to local extinctions of montane species, emphasizing the importance of understanding the genetic diversity and population connectivity within sky islands systems for the conservation management of remaining populations. Our study focuses on the endangered alpine skink Pseudemoia cryodroma, which is endemic to the Victorian Alps in south-eastern Australia, and has a disjunct distribution in montane habitats above 1100 m a.s.l. Using mitochondrial DNA (mtDNA) and microsatellite loci, we investigated species delimitation, genetic connectivity and population genetic structure across the geographic range of this species. We found discordance between genetic markers, indicating historical mtDNA introgression at one of the study sites between P. cryodroma and the closely related, syntopic P. entrecasteauxii. Molecular diversity was positively associated with site elevation and extent of suitable habitat, with inbreeding detected in three of the five populations. These results demonstrate the complex interaction between geography and habitat in shaping the population structure and genetic diversity of P. cryodroma, and highlight the importance of minimising future habitat loss and fragmentation for the long-term persistence of this species.     

Keeping it in the family: strong fine-scale genetic structure and inbreeding in <Emphasis Type="Italic">Lodoicea maldivica</Emphasis>, the largest-seeded plant in the world

The fine-scale spatial genetic structure (FSGS) of plant populations is strongly influenced by patterns of seed dispersal. An extreme case of limited dispersal is found in the charismatic yet endangered palm Lodoicea maldivica, which produces large fruits (up to 20 kg) dispersed only by gravity. To investigate patterns of seed dispersal and FSGS in natural populations we sampled 1252 individual adults and regenerating offspring across the species’ natural range in the Seychelles archipelago, and characterised their genotypes at 12 microsatellite loci. The average dispersal distance was 8.7?±?0.7 m. Topography had a significant effect on seed dispersal, with plants on steep slopes exhibiting the longest distances. FSGS was intense, especially in younger cohorts. Contrary to what might be expected in a dioecious species, we found high levels of inbreeding, with most neighbouring pairs of male and female trees (≤10 m) being closely related. Nonetheless, levels of genetic diversity were relatively high and similar in the various sampling areas, although these differed in disturbance and habitat fragmentation. We discuss potential trade-offs associated with maternal resource provisioning of progeny, seed dispersal and inbreeding, and consider the implications of our findings for managing this globally significant flagship species.