Calcium silicate enhances resistance of sugarcane to the African stalk borer Eldana saccharina Walker (Lepidoptera: Pyralidae)

Abstract

• 1 The stalk borer Eldana saccharina is the most destructive pest in sugarcane in South Africa. This study investigated: (1) the potential of applied silicon in enhancing plant resistance of sugarcane to E. saccharina, using calcium silicate as a carrier; (2) whether there was any interaction between cane variety (and stalk borer resistance) and silicon treatment.
• 2 Six commercial varieties of sugarcane were treated in a pot‐plant trial with two levels (5000 and 10 000 kg/ha) of calcium silicate. After artificial infestation with E. saccharina, response to the treatments was assessed in terms of borer numbers and mass, and stalk damage.
• 3 Calcium silicate significantly enhanced resistance at the higher rate compared with the control. Borer mass was reduced by 19.8% and stalk length bored by 24.4%. Lower treatment values were intermediate between those of the higher treatment and the control.
• 4 The interaction between variety and Si treatment was not significant when varieties were examined individually in the analysis. However, the interaction was significant for borer mass when varieties were grouped according to their resistance characteristics. Susceptible varieties might benefit more from treatment with silicon than resistant ones, as resistant varieties showed no significant effect of silicon.
• 5 All varieties had increased silicon content due to the treatments, but differed appreciably in stalk silicon content at the different treatment levels. Similarly, within varieties, stalk silicon content did not correspond consistently with borer response patterns and silicate application rates.

     

Laboratory and field evaluation of Beauveria bassiana against sugarcane stalkborers (Lepidoptera: Pyralidae) in the lower Rio Grande Valley of Texas

Of approximately 18,200 ha planted to sugarcane in south Texas, only approximately 80 ha (<0.5%) are treated with insecticides because this type of control is widely regarded as ineffective against stalkboring pyralids, the key pests of sugarcane. Therefore, nonchemical control measures, such as resistant varieties and biological controls, must be evaluated to mitigate the losses caused by stalkborers. We performed laboratory and field evaluations on the use of Beauveria bassiana (Balsamo) Vuillemin (Deuteromycotina: Hyphomycetes) (strain GHA) against the Mexican rice borer, Eoreuma loftini (Dyar) (Lepidoptera: Pyralidae), which causes damage in south Texas estimated at between 10 and 20 million dollars annually. We also performed bioassays against the sugarcane borer, Diatraea saccharalis (F.) (Pyralidae), the key pest in other sugarcane growing areas. In the bioassays, E. loftini was substantially more susceptible to B. bassiana than D. saccharalis, based on both 5-d LD50 values and survival times. A commercial oil-based formulation of B. bassiana was evaluated in the field using the following treatments: oil alone (control), B. bassiana + oil, and B. bassiana + Silwet L-77 carrier at an application rate of 5 x 10(13) spores per hectare. Neither numbers of E. loftini per stalk, nor stalk damage (approximately 20% bored internodes) were significantly affected by treatment. The application of B. bassiana + Silwet significantly affected the numbers of internodes showing high damage, but not those with low or medium damage. Analysis of yield data and juice quality showed no significant treatment effects. We conclude that the application of Beauveria + Silwet offers the best chances for reducing damage caused by E. loftini of those treatments tested. However, reductions in insect incidence or damage did not result in measurable increases in yield or sugar quality, probably because of insufficient coverage. Effective control of stalkboring pyralids in sugarcane using B. bassiana will likely require improvements in delivery technology.     

Sugarcane borer (Lepidoptera: Crambidae) management threshold assessment on four sugarcane cultivars

This research assesses the potential for using different economic injury thresholds in management of a key insect pest on susceptible and resistant commercially produced cultivars of sugarcane (Saccharum spp. hybrids). In a 2-yr sugarcane borer, Diatraea saccharalis (F.) (Lepidoptera: Crambidae), study involving four commercially produced sugarcane cultivars and four insecticide treatment thresholds, 'LCP 85-384' and 'HoCP 91-555' were the most susceptible based on percentage of bored internodes compared with the more resistant 'HoCP 85-845' and 'CP 70-321'. In 2001, the 10% infested stalks threshold was not as effective as the 5% early season-10% late season and 5% full season for HoCP 91-555. Based on D. saccharalis injury under natural infestation conditions, susceptible cultivars seem to require a lower infestation threshold than the more resistant cultivars to achieve adequate injury reduction. Among yield components, only the theoretical recoverable sugar per stalk was significantly increased by applying insecticides. With the resistant HoCP 85-845, differences were not detected for percentage of bored internodes among treated versus untreated management regimes. The resistant HoCP 85-845 had higher levels of fiber in our study; however, no clear pattern on resistance mechanisms was established, because the resistant cultivar CP 70-321 had comparatively low levels of fiber. The development of cultivar-specific thresholds is expected to lower the amount of insecticide used for D. saccharalis management in the sugarcane industry, reduce selection pressure, and delay the development of insecticide resistance.     

Soil silicon amendments increase resistance of sugarcane to stalk borer Eldana saccharina Walker (Lepidoptera: Pyralidae) under field conditions

Background and aims

Soil amendment with silicon (Si) can significantly increase resistance of susceptible sugarcane cultivars grown in pots to stalk borer Eldana saccharina (Lepidoptera: Pyralidae). This study tested the hypothesis that a single application of silicate can increase resistance to E. saccharina and increase yield in field-grown sugarcane.

Methods

Two Si materials (Calmasil® and Slagment® at 4 and 8 t/ha) were applied at planting to a field trial extending over three successive crops and incorporating three sugarcane cultivars varying in borer susceptibility.

Results

Both materials, especially Slagment, significantly increased soil, leaf and stalk Si content, but leaf Si levels seldom exceeded 0.5 %. Silicon treatment significantly reduced percent stalks bored in all three crops and stalk length bored in the second ratoon crop, but did not affect borer numbers per 100 stalks (E/100) or increase cane or sucrose yield. Borer damage and E/100 were significantly and consistently reduced in the resistant cultivar.

Conclusions

We argue that if leaf Si% in field sugarcane can be elevated to or exceed 0.8 %, using materials that release Si slowly, substantial reductions in stalk damage and sucrose loss could be achieved in susceptible cultivars in low-Si soils.     

Nature and assessment of losses caused by sugarcane borers

On the two main types of sugarcane borers, viz. top and stalk borers, the latter are generally more harmful than the former. In the young crop stalk borers cause dead hearts, but at later stages their attack is normally restricted to the joints, except in (almost) mature cane when again many tops may be destroyed. In this paper emphasis is on assessing the extent of infestation and the relationship between stalk borer injury and loss of sugar. Various criteria and methods are compared. It is concluded that the ultimate loss in yield due to stalk borer infestation may be as large as 1% for each 1% joints bored, all forms of injury included.     

Silicon impedes stalk penetration by the borer Eldana saccharina in sugarcane

Many plants grown in soils amended with silicon (Si) display increased levels of resistance to attack by insect herbivores. This study aimed to determine if Si treatment impeded Eldana saccharina Walker (Lepidoptera: Pyralidae) stalk penetration and subsequent damage, as well as borer mass gain, on the node and internode of a susceptible (N11) and a resistant (N33) sugarcane cultivar. Sugarcane [Saccharum spp. (Poaceae)] cultivars were grown in a pot trial in Si‐deficient river sand, with (Si+) and without (Si–) calcium silicate. Sugarcane was infested with 2‐week‐old E. saccharina larvae and harvested at four times, 24, 48, 72, and 96 h after infestation. Silicon‐treated plants showed significant increases in Si content compared to controls, and the external rind was significantly harder for Si+ cane than Si– cane. Silicon treatment significantly decreased borer penetration, stalk damage, and larval mass gain. The results are consistent with the hypothesis that Si contributes to sugarcane stalk borer resistance by impeding larval penetration. Silicon appears to contribute to the suppression of E. saccharina directly through reduced larval growth and feeding damage to the crop, and indirectly by delaying stalk penetration, resulting most likely in increased exposure time of young larvae to natural enemies, adverse climatic factors, or control measures that target young larvae (e.g., insecticides).     

Yield of micropropagated sugarcane varieties in different soil types following inoculation with diazotrophic bacteria

It is well described that the beneficial interactions between plants and bacteria are genotype and site specific. Brazilian sugarcane varieties can obtain up to 70% of their nitrogen requirement from biological nitrogen fixation (BNF), and this contribution is related to the Brazilian breeding and selection processes, by example of the variety SP70-1143. In this study the effect of two inoculation mixtures containing diazotrophic bacteria in our earlier pot experiment was evaluated with two sugarcane varieties, a known responder, SP70-1143, and a newly selected variety, SP81-3250, to investigate the sugarcane genotype effect and the role of the mixtures. The sugarcane varieties SP70-1143 and SP81-3250 were grown under commercial field conditions at three sites with contrasting soil types: an Alfisol, an Oxisol and an Ultisol that means a low, medium and high natural fertility respectively. The stem yield and BNF contribution in response to bacterial inoculation were influenced by the strain combinations in the inoculum, the plant genotype, and the soil type and nitrogen fertilization, confirming the genetic and environmental influence in PGP-bacteria interactions. Inoculation effects on the BNF contribution and stem yield increased in the variety SP70-1143 grown in the Alfisol without nitrogen fertilization for three consecutive crops, and it was equivalent to the annual nitrogen fertilization. The plants grown in the Oxisol showed small increases in the productivity of the variety SP70-1143, and in the Ultisol the sugarcane plants presented even decreases in the stem productivity due to inoculation with diazotrophic bacteria mixtures. The results demonstrate the feasibility of the inoculation technology using diazotrophic bacteria in micropropagated sugarcane varieties grown in soils with low to medium levels of fertility. In addition, the results also indicated that specific plant – bacteria – environment combinations are needed to harness the full benefits of BNF. Section Editor: C. P. Vance     

Effects of Elasmopalpus lignosellus (Lepidoptera: Pyralidae) damage on sugarcane yield

Feeding by lesser cornstalk borer, Elasmopalpus lignosellus (Zeller) (Lepidoptera: Pyralidae), larvae on sugarcane (a complex hybrid of Saccharum spp.) causes leaf damage, dead hearts, and dead plants that can result in stand and yield loss. A 2-yr greenhouse experiment was conducted to examine sugarcane variety and plant age-specific feeding responses to E. lignosellus. Plants growing from single-eye setts of three varieties were exposed to a single generation of E. lignosellus larvae beginning at the three-, five-, and seven-leaf stages. Results indicated that the physical damage and resulting yield loss of plants attacked by E. lignosellus larvae were dependent on the variety and leaf stage at which they were infested. Significantly more plant damage was observed in all three varieties when infested at the three- than at the seven-leaf stage. Larvae caused significantly more plant damage and reduced yield in CP 89-2143 than in CP 78-1628. Tiller production increased in CP78-1628 and CP 88-1762 when infested at the three-leaf stage, whereas tiller production, biomass and sugar yield decreased in CP 89-2143 when infested at all leaf stages, compared with the untreated control. There was no reduction in yield when CP 78-1628 was infested at the three- or five-leaf stages. Biomass was reduced in CP 88-1762 when plants were infested at any of the leaf stages, but sugar yield was reduced only when infested at the seven-leaf stage. These results indicate that compensation in response to E. lignosellus damage was variety dependent and declined with the delay in infestation time.     

Technique for screening of sugarcane varieties resistant to top borer,Scirpophaga nivella F.

Studies on the resistance to top borer (S. nivella) in sugarcane varieties were made in the plant and ratoon crops. Eight varieties, namely, P. 12235, Co. 1007, Co. 1107, Co. 1148, Co. 1328, G. 12061, CoJ.46 and CoL.9 were grown in 4 replications of 6 rows of 30 meters each. Samples of stalks were taken from 5.0 per cent row length and also four samples of 10 stalks each under the graded incidence of 0, 10, 20, 30, 40, 50, 60, 70, 80, 90 and 100.0 per cent from, 400 stalks, cut at random and pooled, in each variety. It turned out that CoL.9 hitherto considered as a susceptible variety towards the top borer, obtained the overall rated value 1, having the least total loss for the sum of characters (stalk length, number of internodes, girth, weight, sucrose and C.C.S.). It was suggested that in top borer endemic areas CoL.9 and P.12235 may be preferred both as plant and ratoon crops. Simple and partial correlations worked out between the per cent of incidence and different loss characters showed that there existed a positive and significant relation between them. The regression coefficient showed a linear relationship between them. The regression equations were also worked out. It was found that from the incidence values alone the relative amount of losses caused in different varieties by the top borer could be confidently predicted. It was concluded that the sugarcane varieties could be screened for resistance to top borer simply by recording the percentage of borer incidence.     

Mechanism of resistance to the spotted stalk borer,Chilo sacchariphagus,in the sugarcane cultivar R570

Resistance in sugarcane [Saccharum spec. (Poaceae)] to the spotted stalk borer, Chilo sacchariphagus (Bojer) (Lepidoptera: Pyralidae), was studied by comparing feeding behaviour on resistant cv. R570 and susceptible cv. R579. In a field survey, the feeding behaviour of C. sacchariphagus larvae was described to identify their feeding sites on the plant. In a greenhouse artificial infestation study, we compared the establishment of larvae on potted plants. In laboratory choice and no‐choice experiments, we studied the establishment of larvae on plant organs (stalk, sheath, leaf spindle). Study of the feeding behaviour showed that: (1) first to fourth instars are able to feed on stalk, sheath, and leaf spindle, (2) boring into the stalk occurs mostly in the four uppermost internodes, and (3) most young larvae bore through the abaxial surface of leaf sheaths to reach the stalk. In greenhouse experiments, we observed an early two‐fold reduction of the number of larvae on R570 plants within the first 48 h after infestation. In laboratory experiments, larval antixenosis was demonstrated at the abaxial surface of R570 leaf sheath, but was observed neither in the leaf spindle nor in the stalk. First, second, and third instars were susceptible to this antixenosis. We hypothesize that the main resistance mechanism in R570 is an early reduction of larval establishment on plants, due to antixenosis located at the abaxial surface of leaf sheaths.     

Expression analysis of genes associated with sucrose accumulation in sugarcane (Saccharum spp. hybrids) varieties differing in content and time of peak sucrose storage

Sucrose synthesis/accumulation in sugarcane is a complex process involving many genes and regulatory sequences that control biochemical events in source–sink tissues. Among these, sucrose synthase (SuSy), sucrose phosphate synthase (SPS), soluble acid (SAI) and cell wall (CWI) invertases are important. Expression of these enzymes was compared in an early (CoJ64) and late (BO91) maturing sugarcane variety using end‐point and qRT‐PCR. Quantitative RT‐PCR at four crop stages revealed high CWI expression in upper internodes of CoJ64, which declined significantly in both top and bottom internodes with maturity. In BO91, CWI expression was high in top and bottom internodes and declined significantly only in top internodes as the crop matured. Overall, CWI expression was higher in CoJ64 than in BO91. During crop growth, there was no significant change in SPS expression in bottom internodes in CoJ64, whereas in BO91 it decreased significantly. Apart from a significant decrease in expression of SuSy in mature bottom internodes of BO91, there was no significant change. Similar SAI expression was observed with both end‐point and RT‐PCR, except for significantly increased expression in top internodes of CoJ64 with maturity. SAI, being a major sucrose hydrolysing enzyme, was also monitored with end‐point PCR expression in internode tissues of CoJ64 and BO91, with higher expression of SAI in BO91 at early crop stages. Enzyme inhibitors, e.g. manganese chloride (Mn⁺⁺), significantly suppressed expression of SAI in both early‐ and late‐maturing varieties. Present findings enhance understanding of critical sucrose metabolic gene expression in sugarcane varieties differing in content and time of peak sucrose storage. Thus, through employing these genes, improvement of sugarcane sucrose content is possible.     

Resistance to the Mexican rice borer (Lepidoptera: Crambidae) among Louisiana and Texas sugarcane cultivars

A 2-yr study to evaluate Louisiana and Texas sugarcane, Saccharum spp., cultivars for resistance to the Mexican rice borer, Eoreuma loftini (Dyar) was conducted in two locations in Texas, chosen for having different infestation levels. Criteria for assessment of resistance included percentage of bored internodes and adult emergence holes, the latter used to determine the relative impact of each cultivar on the potential areawide buildup or reduction of adult E. loftini populations. A recently released cultivar, HoCP 85-845, seemed to lose a portion of its resistance under heavy E. loftini infestation pressure, suggesting its value only in moderate-to-low infestation conditions. Cultivar CP 70-321 was the most resistant. Results indicated that cultivar LCP 85-384 was significantly (P < 0.05) more susceptible than NCo 310, traditionally the most susceptible cultivar commercially produced in Texas. In 2001, LCP 85-384, which now represents 85% of the production area in Louisiana, had the greatest moth production per hectare (17,052 +/- 3,956) under the lower infestation pressure, significantly (P < 0.05) higher than HoCP 85-845 (3,038 +/- 2,353). In a portion of the test at the high-infestation location, high levels of sodium and magnesium salt stress (15-30-cm soil depth) were associated with higher E. loftini damage in all cultivars except HoCP 91-555 and CP 70-321.     

Characterisation of genome regions incorporated from an important wild relative into Australian sugarcane

Mandalay is an important Saccharum spontaneum clone used historically in Australian sugarcane breeding programs, and has given rise to many valuable cultivars. In order to better understand the genetic contribution of Mandalay to Australian varieties and elite parental material, a combined pedigree and quantitative trait loci (QTL) mapping approach was undertaken. A genetic map containing 400 single-dose markers was constructed for the Australian sugarcane clone MQ77340, one parent of an Australian sugarcane population (Q117 × MQ77340), using amplified fragment length polymorphism (AFLP) and simple sequence repeat (SSR) markers. This cultivar was selected because it is a direct descendent of Mandalay; its grandparents are Korpi, a S. officinarum clone, and Mandalay. The 400 markers were scattered onto 101 linkage groups (LGs) with an estimated map length of 3582 cM. The ancestral origin of all of the markers was determined with approximately 25% of the markers shown to originate from Mandalay, and a similar percentage from Korpi. Of the 101 LGs, 65 contained markers originating from Mandalay and/or Korpi. QTL analysis was undertaken using the map and 3 years of field data for three sugar-related traits (pol, brix, and CCS) and using single year field data for fibre, stalk weight and cane and sugar yield. Markers from both Mandalay and Korpi were found to be associated with both positive and negative effects on all of the traits analysed.     

Effects of single and multiple herbivory by host and non‐host caterpillars on the attractiveness of herbivore‐induced volatiles of sugarcane to the generalist parasitoid Cotesia flavipes

It is well known that parasitoids are attracted to volatiles emitted by host‐damaged plants; however, this tritrophic interaction may change if plants are attacked by more than one herbivore species. The larval parasitoid Cotesia flavipesCameron (Hymenoptera: Braconidae) has been used intensively in Brazil to control the sugarcane borer, Diatraea saccharalisFabricius (Lepidoptera: Pyralidae) in sugarcane crops, where Spodoptera frugiperda (JE Smith) (Lepidoptera: Noctuidae), a non‐stemborer lepidopteran, is also a pest. Here, we investigated the ability of C. flavipes to discriminate between an unsuitable host (S. frugiperda) and a suitable host (D. saccharalis) based on herbivore‐induced plant volatiles (HIPVs) emitted by sugarcane, and whether multiple herbivory (D. saccharalis feeding on stalk + S. frugiperda feeding on leaves) in sugarcane affected the attractiveness of HIPVs to C. flavipes. Olfactometer assays indicated that volatiles of host and non‐host‐damaged plants were attractive to C. flavipes. Even though host‐ and non‐host‐damaged plants emitted considerably different volatile blends, neither naïve nor experienced wasps discriminated suitable and unsuitable hosts by means of HIPVs emitted by sugarcane. With regard to multiple herbivory, wasps innately preferred the odor blend emitted by sugarcane upon non‐host + host herbivory over host‐only damaged plants. Multiple herbivory caused a suppression of some volatiles relative to non‐host‐damaged sugarcane that may have resulted from the unaltered levels of jasmonic acid in host‐damaged plants, or from reduced palatability of host‐damaged plants to S. frugiperda. In conclusion, our study showed that C. flavipes responds to a wide range of plant volatile blends, and does not discriminate host from non‐host and non‐stemborer caterpillars based on HIPVs emitted from sugarcane. Moreover, we showed that multiple herbivory by the sugarcane borer and fall armyworm increases the attractiveness of sugarcane plants to the parasitoids.     

Mapping of QTL for resistance to the Mediterranean corn borer attack using the intermated B73 × Mo17 (IBM) population of maize

The Mediterranean corn borer or pink stem borer (MCB, Sesamia nonagrioides Lefebvre) causes important yield losses as a consequence of stalk tunneling and direct kernel damage. B73 and Mo17 are the source of the most commercial valuable maize inbred lines in temperate zones, while the intermated B73 × Mo17 (IBM) population is an invaluable source for QTL identification. However, no or few experiments have been carried out to detect QTL for corn borer resistance in the B73 × Mo17 population. The objective of this work was to locate QTL for resistance to stem tunneling and kernel damage by MCB in the IBM population. We detected a QTL for kernel damage at bin 8.05, although the effect was small and two QTL for stalk tunneling at bins 1.06 and 9.04 in which the additive effects were 4 cm, approximately. The two QTL detected for MCB resistance were close to other QTL consistently found for European corn borer (ECB, Ostrinia nubilalis Hübner) resistance, indicating mechanisms of resistance common to both pests or gene clusters controlling resistance to different plagues. The precise mapping achieved with the IBM population will facilitate the QTL pyramiding and the positional cloning of the detected QTL.     

Sugarcane mosaic virus in plantlets regenerated from diseased leaf tissue

Plantlets produced from sugarcane leaf tissue were examined to determine the effect of propagation on the frequency of occurrence of sugarcane mosaic virus (SCMV).Explants from immature leaf tissues of the sugarcane variety CP 72-356 (Saccharum interspecific hybrid), healthy or SCMV-infected, were cultured on Murashige-Skoog medium to which a combination of cytokinin and auxin had been added. Plantlets developed on healthy and infected leaf tissue within 6 weeks. The juice from plantlets was assayed for SCMV on Rio sorghum (Sorghum bicolor (L.) Moench, var. Rio) seedlings and on sugarcane varieties CP 31-294 and CO 31-588 for SCMV-strain identification. Results indicated that SCMV strain H was transmitted from the donor tissue to the regenerated plantlets. Observation on plantlets reared in the greenhouse showed that 23% had symptoms of SCMV. In a second replicated experiment, the leaf tissue from plants of POJ 234 free of mosaic or infected with SCMV strain A, B, D, H, or I was cultured. Each of the five strains was transmitted from donor to plantlet as indicated by assays on sorghum and sugarcane varieties. From 11 to 88% of the plantlets had mosaic symptoms, depending on the strain infecting the donor plant. In this experiment, SCMV-strain M was transmitted from an unidentified donor variety to 23% of the regenerated plantlets.Portions of this paper have been presented to the American Society of Sugar Cane Technologists, at the meeting in Clearwater, Florida in June, 1984.     

Antioxidant responses to water deficit by drought‐tolerant and ‐sensitive sugarcane varieties

Water deficit is the major yield‐limiting factor of crop plants. The exposure of plants to this abiotic stress can result in oxidative damage due to the overproduction of reactive oxygen species. The aim of this work was to study the antioxidant‐stress response of drought‐tolerant (SP83‐2847 and SP83‐5073) and drought‐sensitive (SP90‐3414 and SP90‐1638) sugarcane varieties to water‐deficit stress, which was imposed by withholding irrigation for 3, 10 and 20 days. The drought‐sensitive varieties exhibited the lowest leaf relative water content and highest lipid peroxidation, hydrogen peroxide (H₂O₂) and proline contents during the progression of the drought‐stress condition. The antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX), guaiacol peroxidase (GPOX) and glutathione reductase (GR) activities changed according to variety and stress intensity. SP83‐2847 exhibited higher CAT and APX activities than the other varieties in the early stage of drought, while the activities of GPOX and GR were the highest in the other varieties at the end of the drought‐stress period. A Cu/Zn SOD isoenzyme was absent at the end of drought period from the SP90‐3414‐sensitive variety. The results indicate that lipid peroxidation and early accumulation of proline may be good biochemical markers of drought sensitivity in sugarcane.     

Restriction site associated DNA (RAD) for de novo sequencing and marker discovery in sugarcane borer,Diatraea saccharalis Fab. (Lepidoptera: Crambidae)

We present the development of a genomic library using RADseq (restriction site associated DNA sequencing) protocol for marker discovery that can be applied on evolutionary studies of the sugarcane borer Diatraea saccharalis, an important South American insect pest. A RADtag protocol combined with Illumina paired‐end sequencing allowed de novo discovery of 12 811 SNPs and a high‐quality assembly of 122.8M paired‐end reads from six individuals, representing 40 Gb of sequencing data. Approximately 1.7 Mb of the sugarcane borer genome distributed over 5289 minicontigs were obtained upon assembly of second reads from first reads RADtag loci where at least one SNP was discovered and genotyped. Minicontig lengths ranged from 200 to 611 bp and were used for functional annotation and microsatellite discovery. These markers will be used in future studies to understand gene flow and adaptation to host plants and control tactics.