Nathaniel Wallich, MD, PhD, FRS, FLS, FRGS, (1786–1854) and the Herbarium of the Honourable East India Company, and their relation to the de Candolles of Geneva and the Great Prodromus

The botanical career of Nathaniel Wallich is followed; his collecting activities in Asia enumerated, and the final disposition of his huge herbarium, largely the property of the Honourable East India Company, is given. His relationship with numerous eminent contemporary botanists, and particularly with the de Candolles of Geneva, is described, together with the role that each played in assisting Wallich to work up his material.
A full list of the works used in the composition of this paper is given in an Appendix rather than following the usual citation convention. Copies of the correspondence between Wallich and the de Candolles of Geneva are available on microfiche.     

Lectotypification of Buxbaumia aphylla Hedw. and B. aphylla var. viridis DC. (Buxbaumiaceae)

Abstract

The two species of Buxbaumia Hedw. known to occur in Europe were both originally discovered on this continent and were the earliest in the genus (as presently delimited) to be described. Already widely known, Buxbaumia aphylla Hedw., was validated by Johannes Hedwig in 1801, whereas B. viridis (DC.) Moug. & Nestl. was initially described as a variety of B. aphylla by Augustin Pyramus de Candolle in 1815. After two centuries in the bryological literature, these taxa are herein effectively typified. Lectotypes for the names B. aphylla and B. viridis are designated based on original herbarium sheets from the Hedwig-Schwägrichen and De Candolle collections in G.     

Identification Keys,the “Natural Method,” and the Development of Plant Identification Manuals

The origins of field guides and other plant identification manuals have been poorly understood until now because little attention has been paid to 18th century botanical identification guides. Identification manuals came to have the format we continue to use today when botanical instructors in post-Revolutionary France combined identification keys (step-wise analyses focusing on distinctions between plants) with the “natural method” (clustering of similar plants, allowing for identification by gestalt) and alphabetical indexes. Botanical works featuring multiple but linked techniques to enable plant identification became very popular in France by the first decade of the 19th century. British botanists, however, continued to use Linnaeus’s sexual system almost exclusively for another two decades. Their reluctance to use other methods or systems of classification can be attributed to a culture suspicious of innovation, anti-French sentiment and the association of all things Linnaean with English national pride, fostered in particular by the President of the Linnean Society of London, Sir James Edward Smith. The British aversion to using multiple plant identification technologies in one text also helps explain why it took so long for English botanists to adopt the natural method, even after several Englishmen had tried to introduce it to their country. Historians of ornithology emphasize that the popularity of ornithological guides in the 19th and 20th centuries stems from their illustrations, illustrations made possible by printing technologies that improved illustration quality and reduced costs. Though illustrations are the most obvious features of late 19th century and 20th century guides, the organizational principles that make them functional as identification devices come from techniques developed in botanical works in the 18th century.     

Botanists and Medical Herbalism in Montpellier

The article describes how the medical school in Montpellier, organized in 1498, responded to the development of the Jussiaean classification of plants. Though overshadowed by Paris in the eighteenth century as a center of medical and botanical training, botany as taught at Montpellier provided the impetus for the conversion of traditional herbalism into a biology-based medicine by the nineteenth century. In addition, the plant affinities and analogies underlying natural classification led to the conception of a viable theory of evolution, as Darwin acknowledged. The opposition to these advances, evident in the nineteenth century, remains alive today.     

A classification of the genus Nothofagus (Fagaceae)

PHILIPSON, W. R. & PHILIPSON, M. N., 1988. A classification of the genus Nothofagus (Fagaceae). The genus Nothofagus is subdivided into two subgenera, two sections and three subsections, employing characters of the pollen, cupule and vernation, together with the incidence of leaf-fall. The subdivision into subgenera also agrees with present geographical distribution and with characters of the secondary xylem. One subgeneric and one subsectional name are new. Reasons are given for departures from previous classifications.     

A reassessment of the systematics and a proposal for the phylogeny of some cosmopolitan Lineus species (Nemertea)

Morphological, behavioural and biochemical characters of 9 cosmopolitan, benthic species of the nemertean genus Lineus are used both to clarify their taxonomy and to discuss their phylogenetic relationships. Data analysis shows that all fissiparous species of Lineus collected in the world seas up to date can be placed in a single species, L. sanguineus, with three recognisable subspecies, L. s. sanguineus, L. s. nigricans and L. s. pseudolacteus. These taxa were originally described as separate species mainly according to their geographic origin under the names L. sanguineus (shores of European seas), L. socialis (Atlantic North American shores), L. vegetus (Pacific North American shores), L. pseudolacteus (shores of the English Channel) and L. nigricans (Mediterranean coasts of Italy and France). Examination of the character value matrix suggests a phylogenetic tree developing from two ancestral branches. The first branch includes the two related species L. ruber and L. viridis, the second branch the three species L. longissimus, L. lacteus and L. sanguineus. This approach to the taxonomic and phylogenetic relationships of Lineus nemertean species is in agreement with the intra- and interspecies histocompatibility data in nemerteans: (i) grafts transplanted from donors to recipients of the same species succeed and grafts transplanted from donors to recipients of different species fail; (ii) grafts are rejected more rapidly when the donor and recipient species diverged earlier in evolution and, a contrario, grafts are accepted better when the donor and recipient species have been more recently isolated.     

Parsimony analysis of endemicity as a panbiogeographical tool: an analysis of Caribbean plant taxa

To demonstrate that parsimony analysis of endemicity (PAE) can be a method implementing the panbiogeographic approach, we analyzed two data matrices of 40/38 biogeographic provinces × 148 plant species from the Caribbean subregion of the Neotropical region, one where taxa are represented by individual tracks and the other where taxa are represented by single sample localities. We obtained six generalized tracks resulted from the PAE of the areas × individual tracks matrix, and one generalized track from the PAE of the areas × single sample localities matrix, with the latter nested within the former tracks. The results obtained show that PAE works as a panbiogeographical tool if it is based on an areas × individual tracks matrix. When performed in this way, PAE retrieves spatial information that is lost when it is based on an areas × single sample localities matrix, raising doubts regarding the conclusions derived from this latter type of analysis. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 101 , 961–976.     

A cladistic analysis of Geranium subgen. Erodioidea (Picard) Yeo (Geraniaceae)

Subgenus Erodioidea , comprising 19 species, is diagnosed exclusively by the type of fruit discharge and associated morphological characters, all of which are of widespread occurrence within the Geraniaceae. We have no evidence to suggest that the three included sections ( Erodioidea, Aculeolata and Subacaulia) form a monophyletic group. Cladistic analysis of a data set containing 30 morphological characters has confirmed our doubts of monophyly of the subgenus by placing part of the outgroup within the ingroup. Subsequent analyses of the two included non-monotypic sections, Erodioidea and Subacaulia , give different results. For both sections, the monophyly assumption is reasonably well-supported by characters. However, while analysis of sect. Erodioidea results in an explicit hypothesis of relationships and a fully resolved cladogram, resolution within sect. Subacaulia is low. For analysis of the latter, seven different outgroups were used and, in each one, the successive approximations weighting procedure (available in the program Hennig 86) was followed to improve resolution. Despite this, lower nodes in the cladogram remained unresolved, and strict consensus trees of all the analyses resulted in only a few replicated subterminal clades. These results are discussed in connection with biogeographical data and with the hypothesis that representatives of sect. Subacaulia are schizoendemics.     

Two decades of interaction between the MacArthur-Wilson model and the complexities of mammalian distributions

More than two decades after its publication, MacArthur and Wilson's equilibrium model of insular biogeography continues to provide the conceptual foundation for investigating the distribution of species on islands and the composition of insular biotas. During this period, studies of the distributions of mammals among insular habitats have tested, modified, and extended MacArthur and Wilson's simple formalism to enhance greatly our understanding of the complexities of biogeographic patterns and processes. The papers in this symposium summarize many of the past contributions of mammalian biogeographers and introduce important new data and ideas. The diversity of biological characteristics and associated distributional patterns exhibited by mammals has facilitated this endeavour. Some insular mammalian faunas appear to represent approximate equilibria between opposing rates of contemporary colonization and extinction. Other faunas are currently decreasing in diversity because of extinctions, owing either to natural habitat fragmentation that has occurred since the Pleistocene or to human activities within the last few centuries. Still other faunas have been increasing in diversity (at least until recent human impacts) because limiting rates of origination, both colonization and speciation, have been extremely low. The questions and analyses of island biogeography can also be applied to continents with comparable overall results: the distributions of continental faunas reflect the consequences of similar processes of colonization, speciation and extinction. Analyses of insular distributions show unequivocally that probabilities of extinction, colonization and speciation are highly deterministic and vary in predictable ways among different taxa and archipelagos. These findings have important implications for applying the theory and data of insular biogeography to the pressing practical problems of designing natural reserves to preserve native species.     

历史生物地理学进展

生物地理学研究动植物的地理分布。历史生物地理学重建生物区系历史。分替理论的复兴动摇了散布理论的上百年统治。最近10年主要是分替理论推动了历史生物地理学,出现了多个途径——种系发生物地理学、分支分替生物地理学、特有性的俭吝分析和泛生物地理学。岛屿生物地理学理论有了改进和严格的实验检验;庇所学说产生了新的模型。最后就我国如何发展生物地理学提出了对策措施。     

沙蜥属Phrynocephalus生物地理学研究进展

沙蜥属Phrynocephalus作为鬣蜥科Agamidae中的古北界类群,分布区复杂的地质、地理历史对该属物种形成、分化及分布格局的形成具有重要的影响.近年来,随着生物地理学理论的不断发展,各国学者从不同角度对沙蜥属的生物地理学做了大量研究.本文主要综述了这方面的研究进展;同时基于沙蜥属的研究现状对今后的研究做出展望.     

Brazilian Páramos IV. Phytogeography of the campos de altitude

Aim This contribution treats the phytogeography of the contemporary campos de altitude flora, with a focus on patterns at the level of genus. Comparative analysis using data from 17 other sites in Latin America is used to describe phytogeographical patterns at the continental scale. Results are combined with those of previous publications to shed light on the biogeographical origins of contemporary floristic patterns in the high mountains of south‐east Brazil. Location The campos de altitude are a series of cool‐humid, mountaintop grass‐ and shrublands found above elevations of 1800–2000 m in south‐east Brazil, within the biome of the Atlantic Forest. Methods Vascular floras are compiled for the three best‐known campos de altitude sites, and for 17 other highland and lowland locations in Latin America. Floras are binned into phytogeographical groups based on centres of diversity/origin. Floristic and geographical distances are calculated for all location‐pairs; Mantel tests are used to test for relationships between patterns in geographical distance, and floristic and climatic similarity. Multivariate statistics are carried out on the similarity matrices for all genera, and for each phytogeographical group. Predominant life‐forms, pollination and dispersal syndromes are determined for each genus in the campos de altitude flora, and proportional comparisons are made between phytogeographical groups. Supporting evidence from previously published literature is used to interpret analytical results. Results Two‐thirds of the genera in the campos de altitude are of tropical ancestry; the remainder are of temperate‐zone or cosmopolitan ancestry. Most campos de altitude genera are phanerophytes and hemicryptophytes, insect pollinated, and wind or gravity dispersed, but there are significant differences in the distribution of these traits among phytogeographical groups. The campos de altitude show stronger floristic similarities with other Brazilian mountain sites and distant Andean sites than with nearby low‐ and middle‐elevation sites; these similarities are best explained by climatic similarities. Floristic similarities among sites for temperate genera are better explained by ‘sinuous’ distance (e.g. measured along the spines of mountain ranges) than by direct distance; similarities in tropical genera are more related to direct distance. Different phytogeographical groups appear to be responding to different climatic signals. Main conclusions Many taxa currently living at the summits of the south‐east Brazilian Highlands trace their ancestry to temperate latitudes. Patterns of endemism and diversity in the south‐east Brazilian mountains point to climatically driven allopatry as a principal mechanism for speciation. The tropical component of the campos de altitude flora is primarily derived from drier, highland environments of the Brazilian interior; the temperate component rises in importance with elevation, but never reaches the levels seen in the tropical Andes. Most temperate taxa in the campos de altitude appear to have arrived via migration through favourable habitat rather than by recent, long‐distance dispersal. At least 11% of the plant species in the campos de altitude study sites are directly shared with the Andes. Palynofloras show that the campos de altitude have significantly contracted over the past 10,000 years, as regional temperatures have warmed and become more humid.     

历史生物地理学的进展

近年来历史生物地理学的进展主要是隔离分化学派的进展。对隔离分化学派的几个分支学派,特别是分支生物地理学和泛生物地理学在理论和方法方面的进展作了简要回顾和介绍。最近十年来分子手段广泛应用于历史生物地理学研究的各个方面,尤其是谱系生物地理学的快速崛起是历史生物地理学的一个明显特征。对本学科的发展做了初步的展望。     

大数据时代土壤微生物地理学研究综述

土壤蕴含极为丰富的微生物多样性,它们在物质分解、元素生物地球化学循环、植物生产力和生物健康中扮演着关键角色。理解土壤微生物的生物地理分布格局、形成机制与群落构建规则,有助于预测在全球变化背景下土壤微生物组的功能演变及其对陆地生态系统的调控影响。自21世纪以来,土壤微生物生物地理学在各种大型国际微生物计划的推动下逐步形成了分子生物学技术耦合大数据分析的模式,实现了多种尺度上的关联研究。阐述了土壤微生物在分布格局和群落构建规则方面的研究进展,重点介绍了分子生物学技术和大数据分析在土壤微生物生物地理研究中的应用,对土壤微生物生物地理学未来在微生物分类分辨率、模型验证与构建和功能基因地理学的发展方向进行了展望。     

Island evolutionary biogeography: analysis of the weevils (Coleoptera: Curculionidae) of the Falkland Islands (Islas Malvinas)

Aim I analysed distributional and phylogenetic information on weevils (Coleoptera: Curculionidae) from the Falklands, and integrated it with molecular, palaeontological and geological information to infer a geobiotic scenario. Location Falkland Islands (Islas Malvinas). Methods The panbiogeographical analysis was based on data on 23 Falkland species and their related taxa from southern South America. For the cladistic biogeographical analysis I analysed six weevil taxa for which phylogenetic hypotheses are available (the generic groups Cylydrorhinus, Strangaliodes and Falklandius, and the genera Antarctobius, Germainiellus and Puranius). Results from this analysis were compared with previous regionalizations. Cenocrons (sets of taxa that share the same biogeographical history) were identified by considering temporal information provided by fossils and molecular clocks. Finally, a geobiotic scenario was proposed by integrating the available information. Results Six generalized tracks were detected: Maule–Valdivian forests, Magellanic forest, Magellanic moorland, Falkland Islands, Magellanic forest–Magellanic moorland, and Magellanic forest–Falkland Islands. A node was identified in the Magellanic forest, based on the overlap of two generalized tracks. A single general area cladogram was obtained, implying the following sequence: (Magellanic moorland (Maule–Valdivian forests (Magellanic forest, Falkland Islands))). The Falklands are classified here as a biogeographical province in the Austral realm, Andean region and Subantarctic subregion. Falkland weevils seem to belong to a single Subantarctic cenocron. The sequence of events deduced implies the following steps: development of the Subantarctic biota in southern South America, arrival of the Falkland crustal block from South Africa in the Early Cretaceous, geodispersal of the Subantarctic cenocron from southern South America to the Falklands during the Early Oligocene, vicariance of the Magellanic moorland, vicariance of the Maule–Valdivian forests, and final vicariance between the Magellanic forest and the Falkland Islands. Main conclusions The biotic components identified support the connection of the Falkland weevils with the Magellanic forest. Falkland weevils belong to a single cenocron, dated to at least the Early Oligocene, when geodispersal from southern South America may have occurred. An older African cenocron may have been replaced completely by the Subantarctic one when the proto‐Falklands made contact with the Patagonian continental shelf. A geobiotic scenario implying vicariance events related to sea‐level variations could explain the distributional patterns analysed herein.     

Arrival of an Australian anguillid eel in New Zealand: an example of transoceanic dispersal

Anguilla reinhardtii, hitherto known from eastern Australia, New Caledonia, Norfolk Island, and Lord Howe Island, has recently been discovered in rivers of northern New Zealand. Identification, based on morphological and genetic characteristics, is unequivocal; eight consecutive year classes have been found. The only reasonable explanation of this occurrence is transoceanic dispersal to New Zealand, probably from subtropical oceanic spawning grounds north of New Zealand. This corroborates past hypotheses that the strongly diadromous freshwater fish fauna of New Zealand is derived by transoceanic dispersal of known marine life intervals. This revised version was published online in July 2006 with corrections to the Cover Date.     

Panbiogeographical analysis of the shark genus Rhizoprionodon (Chondrichthyes,Carcharhiniformes, Carcharhinidae)

The distributional patterns of the seven species of Rhizoprionodon were analysed using the panbiogeographical method of track analysis. The individual tracks of Rhizoprionodon suggest that the genus is mainly an Indian–Atlantic Ocean group. Five generalized tracks were found: (1) Caribbean, defined by R. porosus and R. terraenovae; (2) eastern coast of South America, defined by R. porosus and R. lalandei; (3) Indian Ocean, defined by R. acutus and R. oligolinx; (4) north‐western Australia, defined by R. acutus, R. oligolinx and R. taylori; (5) north‐north‐eastern Australia, defined by R. acutus and R. taylori. Only R. longurio was not included in any generalized track, and its distribution is restricted to the eastern Pacific Ocean. Two biogeographical nodes were found at the intersection of the generalized tracks 1 and 2 (Caribbean Sea) and generalized tracks 4 and 5 (north Australia). The generalized tracks overlap with those found in several unrelated marine taxa. Overall, the generalized tracks are associated with warm currents. The biogeographical nodes found (Caribbean and Australian) are coincident with the global distribution of mangroves.     

Phylogenetic analysis of the Mexican freshwater crabs of the tribe Pseudothelphusini (Decapoda: Brachyura: Pseudothelphusidae)

The Mexican pseudothelphusid crabs are classified in one subfamily, three tribes, and 13 genera. Up to now, 56 species have been recognized, distributed in a strictly Neotropical pattern, with some of them reaching the state of Sonora on the western slope of Mexico. The tribe Pseudothelphusini is the most diverse, with five genera and 35 species, all of them endemic to Mexico: the two most species‐rich genera are Pseudothelphusa, with 23 species, and Tehuana, with eight species; Epithelphusa includes two species, whereas Disparithelphusa and Smalleyus are monotypic. The Pseudothelphusini lack an updated systematic revision, which could serve as a framework to analyse the monophyletic origin of the group, to clarify the relationships among genera and species, as well as to resolve the taxonomic status of various species complexes. In the present study, an exhaustive morphological revision was conducted using somatic and sexual characters. A phylogenetic analysis was performed using 77 characters and 183 character states, taken from 41 species. Ten trees of the same length were obtained using PAUP 4.0 through a heuristic search. The results show that the tribe as it is actually known constitutes a paraphyletic group, in which the species of Epithelphusa and Pseudothelphusa puntarenas are excluded from the internal group. According to the obtained results, the tribe Pseudothelphusini s.s. includes five genera: Smalleyus, Pseudothelphusa, Tehuana, and two new ones to accommodate Pseudothelphusa galloi and Pseudothelphusa sulcifrons, respectively. This new arrangement considers the provisional suppression of the genus Disparithelphusa, which remained as another species of Pseudothelphusa throughout the cladistic analysis. The phylogenetic results show a strong congruence with the distribution of the species, in several cases grouping species that form morphological clines along a geographical gradient. The previously proposed southern origin of the tribe Pseudothelphusini gains support with the results obtained. © 2010 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 160 , 457–481