刀鲚和凤鲚的分子鉴定及其在仔鱼种类鉴定中的应用

使用mtDNA Cyt b基因序列作为分子标记,基于400 bp左右的序列分析长颌鲚、短颌鲚及凤鲚成鱼的遗传关系。结果显示长颌鲚和短颌鲚间的遗传距离在0—0.5%之间;凤鲚与长颌鲚、短颌鲚的遗传距离分别在7.9%—8.9%和7.7%—8.6%之间。用Kimura双参数模型构建的NJ分子系统树显示,长颌鲚和短颌鲚不能形成彼此独立的分支,而是混合聚在一起形成一个分支;凤鲚则形成另一个分支。对长江口沿岸区域的鲚属仔鱼Cyt b基因片段序列分析发现,仔鱼个体之间的遗传距离为0—0.7%,仔鱼与长颌鲚、短颌鲚的遗传距离在0.1%—0.5%之间,而与凤鲚的遗传距离为8.3%—8.8%。在Kimura双参数模型构建的NJ分子系统树中,仔鱼与长颌鲚、短颌鲚聚为一类,而与凤鲚分开,表明分析的仔鱼样品不包括凤鲚个体。由于长江口一般没有短颌鲚分布,这些仔鱼应该都是长颌鲚。     

Environmental signature in the otolith elemental fingerprint of the tapertail anchovy, Coilia mystus, from the Changjiang estuary, China

The ontogenetic patterns of habitat use and the migratory history of the tapertail anchovy, Coilia mystus, collected in the Changjiang estuary around Chongming Island, China, were studied by examining the environmental signature in the otolith strontium (Sr) and calcium (Ca) fingerprints using electron probe microanalysis (EPMA). Our results suggest that the migration strategy of C. mystus is much more flexible than supposed in the literature to date. The spring spawning population of C. mystus from the studied area was found to consist of individuals with different migration histories. Although the tapertail anchovy seems to be an anadromous fish that spawns and hatches in a freshwater habitat, it can also use a freshwater environment in non‐spawning seasons. The otolith EPMA of the elemental fingerprint (Sr x‐ray maps and Sr : Ca ratios) is an environmental indicator that can be applied to the migratory ecology of other important diadromous species in China.     

从线粒体控制区全序列变异看短颌鲚和湖鲚的物种有效性

经克隆测序获得我国七丝鲚(Coilia grayii)、凤鲚(C. mystus)、刀鲚(C. nasus)和短颌鲚(C. brachygnathus)以及太湖湖鲚(C. nasus taihuensis)等4个种和1亚种32尾个体的mtDNA D-loop区全序列, 以日本鳀(Engraulis japonicus)和秘鲁鳀(E. ringens)为外类群构建了中国鲚属的分子系统发育树, 并讨论了短颌鲚和湖鲚的物种有效性。结果显示, 七丝鲚的D-loop区全序列长1,208 bp, 凤鲚1,279–1,361 bp, 刀鲚1,252–1,290 bp, 短颌鲚1,214–1,252 bp, 湖鲚1,252–1,442 bp, 除七丝鲚外的其他种类个体间均表现出序列长度的多态性。短颌鲚、刀鲚和湖鲚三者间的平均K 2-P遗传距离仅为0.011–0.020, 明显小于它们与凤鲚、七丝鲚及外类群间的遗传距离(0.051–0.349)。以邻接法和最大简约法构建的系统发育树表明, 刀鲚、短颌鲚及湖鲚均未各自构成单系, 而是共同构成一个单系群, 三者并未发生显著分化。研究表明, 短颌鲚和湖鲚为刀鲚的淡水生态型种群, 并非有效物种。系统发育分析表明, 中国鲚属3个有效物种间以凤鲚最为原始, 刀鲚和七丝鲚为姐妹群, 处于较进化的位置。推测凤鲚可能是鲚属祖先种最早从起源中心扩散到西北太平洋的后裔, 而刀鲚和七丝鲚则是凤鲚在演化过程中分别适应寒冷和温暖气候而分化出的物种。     

A preliminary genetic distinctness of four Coilia fishes (Clupeiformes: Engraulidae) inferred from mitochondrial DNA sequences

In order to understand the genetic distinctness between four Coilia fishes,i.e., C. ectenes, C. e. taihuensis, C. mystus, and C. grayii, the combined cytochrome b (cytb), 12S rRNA and 16S rRNA gene sequences were obtained and analysed. The results are as follows: 1) neighbour-joining (NJ) and maximum parsimony (MP) trees were built with 1000 bootstrap replicates. They supported that Coilia fishes consisted of two clades: C. grayii form a monophyletic group, and the rest samples form the other monophyletic group; 2) the topological differences between the NJ tree and the MP tree are checked by Templeton test, indicating that their differences are insignificant (P > 0.05); and 3) Kimura-2-parameter distances between the samples of C. ectenes, C. e. taihuensis and C. mystus are all no bigger than 1.6%, and most of them are between 0.0% and 0.9%. C. ectenes, C. e. taihuensis and C. mystus are closely related and that their differences may be under subspecies.     

基于耳石微化学的长江安徽和县江段刀鲚生境履历重建

为了解长江刀鲚(Coilia nasus)的“生境履历”, 利用电子探针微区分析技术研究了2015年5月17日在长江安徽和县江段捕获的刀鲚短颌鲚与长颌鲚类型耳石Sr和Ca微化学特征。短颌鲚的耳石Sr/Ca值变化动态为2类, 一类比值稳定在2.00左右(1.65±0.87—2.03±0.96), 反映了其纯淡水的生境履历; 另一类比值波动显著, 不仅具有对应淡水生境的低值(2.39±1.18—2.63±0.85), 还具有对应半咸水生境的高值(3.22±1.17—3.29±1.14), 显现了其江海生活的生境履历。长颌鲚耳石的Sr/Ca值均波动显著, 同时具有对应淡水生境的低值(1.35±1.07—2.37±1.04)和半咸水、海水生境的高值(3.47±1.09—8.35±1.25), 表现了其均为溯河洄游的生境履历。Sr面分析结果也与上述Sr/Ca值的结果相印证。长江安徽和县江段刀鲚资源组成复杂, 群体可由纯淡水型和江海生活型的个体共同组成。     

Environmental influences on the spatio-temporal distribution of Coilia nasus in the Yangtze River estuary

The Yangtze River estuary (YRE) is an important migration channel and foraging habitat for Coilia nasus. Due to its ecological significance and a prioritization of this species’ protection, the need to investigate and analyze environmental relationships of the abundance of Coilia nasus in the YRE as well as develop an understanding of their temporal and spatial distributions is becoming exceedingly important. Using fishery data and environmental survey data from 2009 to 2016, three models including generalized additive mixed models (GAMM), generalized additive models with zero-inflated Poisson distribution (ZIP-GAM) and two-step GAM were used to analyze relationships between environmental factors and the distribution of Coilia nasus in the YRE. The results showed that model fitting of GAMM was more consistent with observations and revealed influences of water temperature, salinity, chlorophyll, and pH on distribution. GAMM demonstrated that higher Coilia nasus abundances were located in waters with water temperature values at 15°C and 30°C, and lower Coilia nasus abundances were located in areas with water temperature values at 10°C and 20°C. All models indicated that the effect of salinity on abundance of Coilia nasus present a multimodal pattern including three peaks at 5, 15, and 25 ppt respectively. Additionally, abundance of Coilia nasus increased with the increase of chlorophyll A in its range of 0–4 mg/L. In a range of 8.0–9.5, higher PH value was more suitable for the aggregation of Coilia nasus. Cross validation was used to evaluate the predictive performance of models and GAMM was found to be the best. The predicted abundance distribution of Coilia nasus in the summer and autumn of 2016 was relatively higher overall than that in winter and spring. The predicted zero abundance distribution pattern was consistent with the sampling presence distribution which was obtained using fishery independent survey data of the year 2009–2015. Facing the urgency protection of Coilia nasus in YRE, results of this study could be used for Coilia nasus conservation and reserve planning.     

强壮水螅对凤尾鱼苗的危害

在200mL培养液中放入1～5只强壮水螅(Hydra robusta),然后再放入1只1～7d的凤尾鱼(Coilia mystus)鱼苗,以研究水螅对鱼苗早期生长发育的危害作用。对实验数据的双因素方差分析表明：随着水螅密度的增加,鱼苗死亡率极显著增加,直至鱼苗死亡,而鱼苗平均体重极显著降低;当水螅密度不变时随着鱼龄的增加,鱼苗死亡率极显著降低,而鱼苗平均体重极显著增加。显然,强壮水螅对凤尾鱼鱼苗早期的生长发育有极大的危害作用,但随着鱼龄的增长,危害程度降低,不过仍然影响鱼苗体重的增长。     

Age,growth, maturity and mortality of the tapetail anchovy Coilia brachygnathus (Engraulidae) in Lake Honghu,China

The tapertail anchovy Coilia brachygnathus, a commercially important species mainly distributed along the mid-lower Chang-Jiang basin, is by far the most dominant species in Lake Honghu. To figure out its success in this semiclosed lake, some basic biological parameters of this anchovy were analysed based on samples seasonally collected from October 2020 to December 2021. The results demonstrated that the age classes of fished individuals varied from 0.5 to 3.5, with the majority (97.36%) being between 0.5 and 3 years old. The size at 50% maturity of 17.2 cm total length (TL) for females and 19.0 cm TL for males corresponded to 1 and 1.6 years, respectively. Coilia brachygnathus has a short life span, early sexual maturity and a relatively fast growth rate. The flourishing of the fish in the lake is mainly attributed to its short life span, early maturity, fast growth rate, closed fishing, pelagic spawners, the availability of plenty of food and low predation effect on it. Age 3.5 year occurs in an extremely small percentage of the total (<3%), indicating that a large number of larger-sized or older fish died after spawning, which is probably one of the major sources of water pollution if the closed fishing measure is adopted in Lake Honghu. Thus, individuals older than 2 years or more than 20.0 cm TL should be harvested. These findings have important management implications for the fish resources in Lake Honghu and beyond.     

Isolation and characterization of microsatellite loci in the fish Coilia mystus (Clupeiformes: Engraulidae) using PCR-based isolation of microsatellite arrays

Coilia mystus is the most important harvested fish species in China; it inhabits quite different water environments during the different life history stages. Populations of C. mystus have dropped sharply due to overharvesting and water pollution. We developed eight microsatellite loci in C. mystus for conservation genetics studies. These new markers were tested in 20 individuals from the Min River in ChangLe. The number of alleles ranged from 3 to 8, the expected heterozygosity from 0.621 to 0.853 and the observed heterozygosity from 0.473-0.800. Only two loci deviated significantly from Hardy-Weinberg expectations due to heterozygote deficiency. These primers may provide a tool for understanding demography and population structure of this economically important and threatened species.     

长江口刀鲚耳石年轮确证和年龄与生长研究

洄游性刀鲚是长江中下游重要的渔业资源,20世纪70年代以来,其资源量严重下降。研究以耳石为年龄鉴定材料,对长江口刀鲚渔获物的年龄结构和生长进行研究,主要目的在于确证刀鲚耳石上年轮,分析刀鲚渔获物的年龄结构和生长特征,评价刀鲚资源状况。2006年4月至2007年8月在长江口逐月采样,共采集了576尾洄游性刀鲚。对矢耳石横截面分析发现,从耳石核出发,腹侧生长轴具有周期性的直-弯生长模式,直线生长发生在4到12月,弯曲生长在10月到第二年的6月;边缘轮纹增长率分析也表明,这种直-弯生长模式具有年周期性,可以用来鉴定年龄。弯曲生长向下一个直线生长的转换发生在4月至6月间,将此转换定义为年轮标志。年龄分析表明,长江口刀鲚渔获物包括0龄至4龄共五个年龄组,以1龄和2龄个体为主,雌雄个体年龄组成相似,生长趋势也比较接近,拟合的von Bertalanffy生长方程为SL=327.691-e-0.51(t+0.28)(n=576,r2=0.71,P3.36(n=576,r2=0.95,P<0.05)。与20世纪70年代渔获物调查结果相比,现在长江口刀鲚种群明显低龄化和小型化,表明刀鲚资源已严重过度利用。降低刀鲚的捕捞强度是刀鲚资源保护和恢复的基础。       

Life history of Coilia nasus from the Yellow Sea inferred from otolith Sr:Ca ratios

The habitat use and migratory patterns of the estuarine tapertail anchovy, Coilia nasus, from three sites near- or off-shore of the Yellow Sea, were studied by examining the environmental signatures of Sr and Ca in otoliths using electron probe microanalysis (EPMA). All the samples analyzed were offsprings of typical anadromous C. nasus. The fish grew in freshwater habitat nearly for 1?year, and then entered the brackish and sea water which could be as far as ca. 300?km from the Chinese coast line. The Sr:Ca ratios at the edge of otoliths appeared to correlated with water salinities in sampling sites.     

刀鲚的年龄和生长

鉴定刀鲚年龄的方法很多。本文以鳞片为主,对照耳石、胸鳍鳍条等方面的材料,做了比较全面的研究。发现它们都有明显的年龄标志,但各有优缺点。其中以鳞片取材最容易,观察最方便,缺点是年轮标志比较复杂,有时还有副轮和幼轮等。再生鳞也比较多。刀鲚鱼苗和幼鱼在生长过程中,体长增加较快,至11月份,幼鱼最大个体可达200毫米左右。成鱼体长增加速度逐渐减慢,最大个体只410毫米。但随着年龄的变化,其体重却有显著增加。刀鲚鳞片的生长和体长的增加基本上成正比关系。刀鲚寿命不长,一般只有4-5冬龄,最大个体不超过6冬龄。       

长江口和杭州湾凤鲚胃含物与海洋浮游动物的种类组成比较

2009年6月—8月期间在长江口及杭州湾水域收集了1355尾的凤鲚（Coilia mystus）标本,对其胃含物进行分析,期间采用出现频率（F）、个数百分比（N）、重量百分比（W）、相对重要性指标（IRI）、优势度（Y）公式计算,并进行种类的相似性分析,同步采集了取样点附近的浮游动物,比较了凤鲚胃含物食谱与该海域浮游动物种类组成。结果表明：河口性的长额刺糠虾IRI 为703.25,%IRI为62.94%,远远超过其他种类,甚至超过任何一个桡足类优势种,因而是凤鲚食谱中的最重要的种类。凤鲚摄食的其他主要种类包括：火腿许水蚤（Schmackeria poplesia）（IRI = 261.04）,虫肢歪水蚤（Tortanus vermiculus）（IRI = 107.53）、真刺唇角水蚤（Labidocera euchaeta）（IRI = 27.27）。以上四种浮游动物重要性合计%IRI为98.36%。在主要食物种类占绝对优势。因而是凤鲚饵料中最重要的优势种。种类组成相似性分析结果显示：胃含物和海域浮游动物之间的相似度值大致在0.363—0.365之间;而两者桡足类之间的相似值在0.521—0.575之间。推测凤鲚对个体较小的桡足类摄食方法是过滤性摄食,对种类的选择性较低。而对个体较大的糠虾则是有选择性追逐摄食。     

Mitochondrial DNA diversity of Coilia mystus (Clupeiformes: Engraulidae) in three Chinese estuaries

We used sequences of mitochondrial cytb and 16SrRNA gene segments in order to clarify the genetic diversity and population structure in three Chinese estuary populations of Coilia mystus: 21 individuals from ChangJiang River (Yangtze River) estuary, 22 from MinJiang River estuary, and 22 from ZhuJiang River (Pearl River) estuary (65 individuals total). We obtained 607 base pairs of consensus cytb sequence. Thirty four distinct haplotypes were detected among the 65 cytb sequences. The indexes of nucleotide diversity (π) in these three populations were ChangJiang 0.533%, MinJiang 1.135%, and ZhuJiang 0.268%. MinJiang is the largest of the three populations. Genetic distances within the populations were between 0.3 and 1.2%, and 0.8 to 10.8% among populations. The largest genetic distance was 10.8% between the ChangJiang and ZhuJiang populations, and the smallest was 0.8% between MinJiang and ZhuJiang populations. Analysis of molecular variance (AMOVA) analysis revealed that variation among populations accounts for 90.25% of total variation, suggesting that this is the main source of total variance. We obtained 470 base pairs of consensus sequence of 16SrRNA. We detected 19 distinct haplotypes among the 65 sequences. The indexes of nucleotide diversity (π) in these three populations were ChangJiang 0.108%, MinJiang 0.843%, and ZhuJiang 0.097%. MinJiang is also the largest among these three populations. Genetic distances were between 0.1 and 0.9% within populations and 0.5 to 1.9% between populations. The largest genetic distance was the 1.9% between the ChangJiang and MinJiang populations, and the smallest was 0.5% between the MinJiang and the ZhuJiang populations. AMOVA analysis disclosed that variation among populations accounts for 74.61% of total variation, suggesting that this is the main source of total variation. The results of this study suggest that the three Coilia mystus populations, especially the most isolated Changjiang population, have developed significant genetic structure.     

Seasonal occurrence of helminths in the anadromous fish Coilia nasus (Engraulidae): parasite indicators of fish migratory movements

To understand the seasonal migration of the anadromous Coilia nasus , we attempted to identify the parasites infecting C. nasus and determine their seasonal occurrence. From June 2007 to July 2008, a survey of 775 C. nasus individuals from the estuary of the Yangtze River and the coast of the East China Sea revealed more than 7,300 parasites associated with the gills and alimentary tracts of C. nasus . The following 6 helminth taxa were identified, i.e., the monogeneans Heteromazocraes lingmueni and Helciferus tenuis, the digenean Elytrophallus coiliae, the acanthocephalan Acanthosentis cheni , and larvae of the nematodes Anisakis simplex and Contracaecum sp., all of which are marine or brackish-water parasites. The absence of freshwater helminths suggested that the parasites acquired in freshwater may have been accidentally, and easily, lost by the time the fish had reached the estuary and coast. Contrary to seasonal occurrence of the parasites' life cycles, the lowest mean abundance and prevalence of H. lingmueni and A. cheni occurred in August, which suggested the immigration of C. nasus from freshwater to the Yangtze estuary, with lower parasite burdens. The highest mean abundance and prevalence of the nematodes A. simplex and Contracaecum sp. in May and June, and the lowest in August, indicated the arrival of the fish from the coast and the Yangtze River, to the estuary, respectively. These findings suggested that a majority of the fish prepared for spawning migration in the estuary in spring and early summer and returned to the estuary after spawning in the lower and middle reaches of the Yangtze River in late summer.     

瓯江口凤鲚鱼卵、仔稚鱼的时空分布及其与环境因子关系

为了解凤鲚(Coilia mystus)早期群体在瓯江口的时空分布及其影响因素, 研究根据瓯江口渔业资源调查数据, 利用两阶段广义加性模型(Two-stage GAM)分析影响凤鲚鱼卵仔稚鱼分布的环境因子。采用交叉验证评价模型的预测性能, 对2020年5—7月的凤鲚鱼卵、仔稚鱼出现率及资源量进行预测。结果表明: 5—7月是瓯江口凤鲚的主要繁殖期, 鱼卵主要分布在瓯江上游七都岛附近低盐水域, 仔稚鱼在瓯江水域均有分布, 瓯江下游灵昆岛近岸水域仔稚鱼的相对资源丰度高于瓯江上游。GAM模型分析表温、表盐是影响凤鲚早期群体分布的主要环境因子, 表盐对鱼卵的分布具有极显著影响(P<0.01), 适宜表盐在1以下, 适宜表温在24—26℃; 仔稚鱼对水温、盐度的适宜度宽于鱼卵, 表温对仔稚鱼的分布具有显著影响(P<0.05), 适宜表温为22—27℃, 适宜表盐为5—13。交叉验证分析认为模型对鱼卵的预测性能(AUC均值0.83)优于仔稚鱼(AUC均值0.71)。2020年预测结果显示, 凤鲚鱼卵的适宜栖息环境较窄, 主要集中在江心屿上游及灵昆岛下游附近水域, 仔稚鱼主要栖息在江心屿至灵昆岛水域。瓯江口作为凤鲚的主要栖息场所之一, 掌握凤鲚早期群体在瓯江口的分布特征及与环境因子间的关系, 能够为其产卵场栖息地的保护和资源养护管理提供科学依据。     

性腺发育不同阶段野生瓯江凤鲚肌肉营养成分的分析与评价

研究旨在针对不同性腺发育阶段(Ⅰ期、Ⅱ期、Ⅲ期、Ⅳ期、Ⅴ期)野生瓯江凤鲚(Coiliamystus)性腺发育情况和肌肉营养成分进行分析与评价.研究表明:在雌、雄野生瓯江凤鲚性腺从Ⅰ期发育至Ⅴ期的过程中,成熟系数呈现上升趋势,凤鲚卵巢的GSI值是精巢GSI值的5倍.在卵巢发育Ⅰ—Ⅴ期,粗脂肪含量显著下降,粗蛋白和水分显著...     

Elemental signature in otolith nuclei for stock discrimination of anadromous tapertail anchovy (Coilia nasus) using laser ablation ICPMS

The elemental signature in otolith nuclei was determined using laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) for stock discrimination of adult anadromous tapertail anchovy, Coilia nasus, in five Chinese estuaries. Five elements (Na, Mg, K, Sr, and Ba) were well detected in the otolith nuclei of the adult fish. Results showed that the elemental composition in the otolith nuclei varied substantially among the estuaries. Age and fish length data showed no significant influences on the elemental concentration ratios across the sample sites. The Sr:Ca and Ba:Ca ratios were inter-site distinct and could be used as natal tags for discriminating among stocks. Discriminant function analyses (DFA) showed that these ratios can be used in discriminating the Liaohe River estuary (LD, 92.3?%), the Yangtze River estuary (CJ, 86.7?%), and the Yellow River estuary (HH, 76.9?%) samples with high classification accuracy, followed by the Haihe River estuary (BH, 58.3?%) and the Daguhe River estuary (JZ, 46.2?%) samples. An overall classification accuracy rate of 72.7?% from the discriminant functions indicated that elemental fingerprinting appeared to have the potential to discriminate between tapertail anchovy stocks in these estuaries.     

洄游型、淡水型和陆封型刀鲚的寄生蠕虫群落结构

由于对淡水环境的适应和江湖阻隔,部分洄游型刀鲚(Coilia nasus)分化成淡水型和陆封型,为寻找区分洄游型、淡水型和陆封型这3种生态型刀鲚的寄生虫标志,并分析其寄生蠕虫群落结构特征,本文调查了3种生态型刀鲚鳃部、胃、肠和幽门盲囊中寄生蠕虫的种类和感染情况。共发现10种寄生虫,包括鳃上3种单殖吸虫:林氏异钩铗虫(Heteromazocraes lingmueni)、细长嗜鳀虫(Helciferus tenuis)和长江中华钩铗虫(Sinomazocraes changjiangensis);胃部1种复殖吸虫:鲚套茎吸虫(Elytrophallus coiliae);肠道3种线虫:简单异尖线虫(Anisakis simplex)、对盲囊线虫(Contracaecum sp.)和胃瘤线虫(Eustrongylides sp.),以及肠和幽门盲囊的3种棘头虫:陈氏刺棘虫(Acanthosentis cheni)、鲇异吻钩棘头虫(Arhythmacanthus parasiluri)、长江傲刺棘头虫(Brentisentis yangtzensis)。林氏异钩铗虫和陈氏刺棘虫在3种生态型的刀鲚中都有较高的感染率和平均丰度;海水性寄生虫细长嗜鳀虫、鲚套茎吸虫和对盲囊线虫只感染洄游型刀鲚,可作为区分洄游型刀鲚的寄生虫标志;淡水性寄生虫长江中华钩铗虫、鲇异吻钩棘头虫和长江傲刺棘头虫只在淡水型刀鲚中发现,可作为淡水型刀鲚的寄生虫标志。洄游型刀鲚的物种丰富度和Brillouin多样性最高,分别在1.25和0.19以上,淡水型刀鲚的较低,分别为0.79~1.12和0.10~0.12,陆封型刀鲚的最低,分别在0.66和0.02以下,这主要是由于淡水型和陆封型刀鲚中海水性寄生虫大部分丢失,以及淡水性寄生虫感染率和平均丰度都较低造成的。盐度降低和中间宿主缺乏是导致淡水型和陆封型刀鲚中海水性寄生虫丢失的主要原因;而淡水性寄生虫较低的感染水平可能是由于其对新宿主的适应时间较短;地理隔离可能是陆封型刀鲚中寄生虫群落多样性最低的另一重要原因。     

Genetic structure and differentiation of four lake populations of Coilia ectenes (Clupeiformes: Engraulidae) based on mtDNA control region sequences

To investigate genetic structure and differentiation of four lake populations of Coilia ectenes, a total of eighty-one individuals from four largest freshwater lakes (Dongting [DT], Poyang [PY], Chaohu [CH], Taihu [TH]) were analyzed based on mtDNA control region sequences. Seventy-five haplotypes were detected, and four to seven 38 bp tandem repeats were found. The indexes of nucleotide diversity (π) in these four populations were DT 0.78%, PY 1.09%, CH 0.81%, and TH 0.62%. Genetic distances within populations were between 0.63 and 1.14%, and from 0.76 to 1.60% among populations. A Neighbor–Joining (NJ) tree consisted of three major clades. Clade 1 consisted of 88.89, 26.09, and 4.55% individuals of DT, PY, and CH. Analysis of molecular variance (AMOVA) showed that most variances occurred within populations, suggesting that this is the main source of total variance. Our results suggest that the four lake populations of C. ectenes have not developed significant genetic structure.