Reaction of incompatible isolate of Pyricularia grisea on rice leaves stripped of epicuticular wax reflects blast conduciveness of soils

Upland rice cultivars were evaluated in the greenhouse for susceptibility to the rice blast disease caused by Pyricularia grisea Sacc., on two upland soils from the Philippines previously considered to be “blast conducive” and “blast non-conducive”. Under monocyclic inoculation tests plants grown in conducive soil showed significantly greater lesion development than plants of the same cultivar grown in non-conducive soil: cultivars considered to be susceptible to the isolates used showed increased number of susceptible-type lesions; resistant cultivars showed increased number of hypersensitive resistant-type lesions. A similar effect was observed under polycyclic tests where several generations of the pathogen were allowed to develop on the test plants. Dilution of conducive soil with non-conducive soil resulted in a corresponding reduction of disease severity, although this was most pronounced on resistant cultivars. Removal of leaf epicuticular waxes (LEW) using organic solvents increased the number of resistant-type lesions on resistant cultivars grown in both soils following inoculation. Susceptible plants were not suitable for quantifying the relative blast conduciveness of a soil because of the extreme environmental sensitivity of the bioassay and the tendency of lesions to coalesce. Comparing numbers of resistant-type lesions on leaves of plants stripped of LEW and inoculated with an incompatible P. grisea isolate among plants grown in different soils proved to be a satisfactory means of distinguishing the relative blast conduciveness of soils under controlled conditions. This method was field tested in eastern India and results corroborated farmer assessment of which soils were blast conducive. Using incompatible isolate-cultivar combinations and LEW-free leaves is proposed as a simple bioassay for assessing blast conduciveness of soils and should prove useful in regional characterization of rice blast risk.     

Comparative study of four rice cultivars with different levels of cadmium tolerance

Cadmium (Cd) has been identified as a significant pollutant due to its high solubility in water and soil and high toxicity to plants and animals. Rice, as one of the most important food crops, is grown in soils with variable levels of Cd and therefore, is important to discriminate the Cd tolerance of different rice cultivars to determine their suitability for cultivation in Cd-contaminated soils. This study investigates the primary mechanisms employed by four rice cultivars in attaining Cd tolerance. HA63 cultivar reduces Cd uptake by increasing Fe absorption through activation of phytosiderophores. T3028 cultivar accumulates the highest level of Cd in leaves while also activating its reactive oxygen species (ROS) scavenging system, including antioxidant enzymes and phytochelatins. In some rice cultivars (such as HA63), a cyanide-resistant respiration mechanism, important in Cd detoxification, was also promoted under the Cd stress. In conclusion, different rice cultivars may adopt different biochemical strategies and respond with different efficiency to Cd stress.     

Pre symptomatic detection of wheat leaf rust in the susceptible cv Skalmeje and the resistant cv Esket by means of UV laser-induced fluorescence

In modern agriculture there is a great demand for a rapid and objective screening method for stress resistance, because so far, the resistance of new cultivars is tested in time- and money consuming field experiments. Based on fluorescence ratios, and lifetime of fluorophores measured by fluorescence spectroscopy, we have postulated that an early discrimination of susceptible and resistant wheat cultivars to the leaf rust pathogen Puccinia triticina can be accomplished. As representative for leaf rust resistant and leaf rust susceptible wheat genotypes the cultivars Esket and Skalmeje, respectively, were chosen. Plants were grown under controlled environment conditions and inoculated with the leaf rust pathogen at the second-leaf-stage by single-droplet application. Fluorescence measurements were carried out from two to four days after inoculation (dai) by using a compact fibre-optic fluorescence spectrometer with nanosecond time-resolution. Experimental results indicated that UV laser-induced spectral characteristics as well as determination of fluorescence lifetime are suited to detect leaf rust two dai. For this purpose several ratios and wavelength can be considered. In general, the tested cultivars showed distinct responses to the pathogen development. In this context the ratio F451/F687 measured three dai and mean lifetimes at 500 nm and 530 nm are suited to differentiate the resistant Esket from the susceptible Skalmeje genotypes.     

Comparison of growth and performance in upland and lowland switchgrass types to water and nitrogen stress

The objective of the study was to examine lowland (Alamo and Kanlow) and upland (Blackwell and Caddo) cultivars of switchgrass (Panicum virgatum L.) for differences in response to water deficit and nitrogen fertilizer. Cultivars were grown in pots with fritted clay at two water levels: well watered and deficit conditions (-0.1 and -1.0 MPa) and two nitrogen levels (10 and 100 kg ha(-1)). Nitrogen determined growth potential of the cultivars more than water availability. The lowland cultivars produced greater biomass yields than upland cultivars. However, upland cultivars showed a smaller response to drought stress. Under water stress conditions all cultivars exhibited a higher leaf percentage of total dry matter (DM), with the upland cultivars having the highest leaf percentage of total DM. Nitrogen proved to have more of an effect on single-leaf photosynthesis rates than water. Alamo demonstrated the greatest biomass production among all cultivars. The differences found between the two lowland cultivars suggest that Alamo would be better suited for forage and biomass production in central Texas, being a higher producer under drought and non-drought conditions than Kanlow as well as upland cultivars.     

Screening species and cultivars for their tolerance to acidic soil conditions.

The major phytotoxins in acid soils are aluminium and manganese. Tolerances to Al and to excessive Mn are independently inherited and Al and Mn solubilities in soils vary. In this work, the response of pasture grasses and legumes to soil acidity was studied on three soils with different Al and Mn concentrations. One provides moderate concentrations of Al with little Mn; one provides high concentrations of both Al and Mn and another provides a very high concentration of Mn at relatively low concentrations of Al. The response of a plant cultivar to changes in the soil acidity induced by lime or acid additions reflects the degree of Al and/or Mn stress provided by a particular soil, and the ability of the cultivar to tolerate those stresses. Examples are given of the way cultivars with different tolerances to Al and Mn toxicity respond to changes in acidity on the soils with different Al and Mn solubility characteristics. The utility of this screening technique to define the tolerance of cultivars to acidity on classically different soils is highlighted.     

Genetic variability of nitrogen accumulation during vegetative development and remobilization during the forcing process in witloof chicory tuberized root (Cichorium intybus L.)

A better knowledge of genetic variability of traits related to nitrogen use efficiency (NUE) is a potential strategy to optimize N fertilization and to reduce environmental pollution without decreasing marketable yield and quality. To this aim, in this study, 13 cultivars of witloof chicory were compared with three reference cultivars known for their adaptation to low, intermediate and high N availability in the field during the vegetative phase of development. Pertinent criteria used for this study were determined by a thorough comparison of nitrogen reserve accumulation in tuberized roots during vegetative development and mobilization during the forcing process in the three reference cultivars. Cluster analysis allowed us to sort the cultivars into four main groups we named G1, G2, G3 and G4. Cultivars of group G4, better adapted to soils with high nitrogen contents (N-demanding cultivars), showed higher total N, nitrate, total amino acids (AA), glutamine contents and lower total N and AA mobilization for chicon growth than did cultivars of group G1, adapted to soils with low nitrogen content (N-sensitive cultivars). An intermediate behavior was exhibited by cultivars of groups G2 and G3, characterized as N tolerant. It is proposed that either chicory growers or breeders may take advantage of the genetic variability revealed in the present study to gain flexibility in choosing the right cultivar for the type of soil available (N-rich soil vs N-poor soil) or to adapt the level of N fertilization to the type of cultivar (N-demanding vs N-sensitive) in order to target the highest NUE for the best chicon yield and trade quality.     

Enhancing plant phosphorus use efficiency for sustainable cropping

Phosphorus (P) is one of the least available mineral nutrients to the plants in many cropping environments. Sub-optimal P nutrition can lead to yield losses in the range of 10% to 15% of the maximal yields. P deficiency is more critical in highly withered soils as well as in calcareous and alkaline soils. Amelioration attempts by addition of phosphatic fertilizers are economically and ecologically unsound as the efficiency of added phosphatic fertilizers is very low. Inoculation with the mineral phosphate solubilizing microbes has not helped much due to inconsistent performance of the inoculants under field conditions. These factors have led to examine the opportunities for developing genetically enhanced plants with better P use efficiency (PUE) through efficient P absorption, transportation and internal utilization. In order to improve the PUE in crop plants, it is important to explore genetic variation for all its associated traits. Inter- and intra-specific variations for these traits are known to exist and are shown to be under genetic and physiological controls, but modified by the plant–environment interactions. A more comprehensive understanding of the molecular and physiological basis of P uptake, transportation and utilization is leading to formulation of strategies aimed at developing better P efficient cultivars suited for sustainable cropping with less P fertilizer inputs. Issues relating to enhancing PUE through genetic manipulations of crop cultivar parameters are discussed.     

Higher yields and lower methane emissions with new rice cultivars

Breeding high‐yielding rice cultivars through increasing biomass is a key strategy to meet rising global food demands. Yet, increasing rice growth can stimulate methane (CH₄) emissions, exacerbating global climate change, as rice cultivation is a major source of this powerful greenhouse gas. Here, we show in a series of experiments that high‐yielding rice cultivars actually reduce CH₄ emissions from typical paddy soils. Averaged across 33 rice cultivars, a biomass increase of 10% resulted in a 10.3% decrease in CH₄ emissions in a soil with a high carbon (C) content. Compared to a low‐yielding cultivar, a high‐yielding cultivar significantly increased root porosity and the abundance of methane‐consuming microorganisms, suggesting that the larger and more porous root systems of high‐yielding cultivars facilitated CH₄ oxidation by promoting O₂ transport to soils. Our results were further supported by a meta‐analysis, showing that high‐yielding rice cultivars strongly decrease CH₄ emissions from paddy soils with high organic C contents. Based on our results, increasing rice biomass by 10% could reduce annual CH₄ emissions from Chinese rice agriculture by 7.1%. Our findings suggest that modern rice breeding strategies for high‐yielding cultivars can substantially mitigate paddy CH₄ emission in China and other rice growing regions.     

Comparison of heavy metal accumulation and cadmium phytoextraction rates among ten leading tobacco (Nicotiana tabacum L.) cultivars in China

Abstract

Cadmium (Cd) contamination is one of the most serious global environmental problems, and phytoremediation, which uses Cd-accumulator plants, is potentially one of the sustainable solutions. Pot experiments with natural and Cd-amended soils were conducted to investigate the accumulation of heavy metals in 10 leading cultivars of tobacco in China. The extraction ability and profiles of Cd accumulation among plant organs were also analyzed. The tobacco roots accumulated cobalt, nickel, and Cd, while the leaf highly bioaccumulated Cd and lowly accumulated zinc, selenium and mercury. The transport from the tobacco stem to the leaf plays a critical role in the accumulation of these elements. The ratios of Cd concentration in the leaves at lower, middle and upper positions were comparatively stable. The high Cd-extracting cultivars were “Hongda”, “NC89” and “Zhongyan 100” when grown in normal soils, “CuiBi 1” and “Hongda” in moderately contaminated soils, and “YuYan 87”, “LongJiang 851” and “K326” in severely contaminated soils. Tobacco leaves could accumulate about 80% of the total Cd extracted from the soil by the plant. Considering the Cd-extraction limitations exhibited by leading tobacco cultivars, screening of germplasm resources for high or low levels of Cd-accumulation is still an important target for the future.     

Plant nutrition in the 20th and perspectives for the 21st century

This paper briefly presents the knowledge of plant nutrition in 1900 and its expansion since then in two areas - the discovery of the micronutrients and the absorption of nutrients from soils.Application of macro- and micronutrient fertilizers has contributed substantially to the huge increase in world food production experienced this century. In developed countries, excessive fertilizer use has led to serious problems of nutrient pollution; here, plant nutritionists will be concerned with monitoring nutrient status of crops and soils to maintain crop production with minimum loss of nutrients to the environment, and development of cultivars with high nutrient efficiency in soils with luxury supplies of nutrients.In many developing countries, soil infertility limits productivity; here, plant nutritional research can raise productivity by diagnosis of nutrient deficiencies and toxicities of crops on previously unfertilized soils, their correction with minimal fertilizer and treatment costs, and development of cultivars with high nutrient efficiency in deficient soils and high tolerance of natural toxicities.The pre-occupation of developed countries with pollution is blinding them to the urgent needs of developing countries for fertilizers and fertilizer research to increase crop production ha-1 as an alternative to clearing more land.     

Shrub Willow Biomass Production Ranking Across Three Harvests in New York and Minnesota

Shrub willow has potential for being a viable dedicated bioenergy crop in temperate northern latitudes of the USA. Selection of high-producing willow cultivars is critical for economic viability and long-term sustainability of willow production systems. Long-term trials are needed in different geographic areas to better understand genetic by environment interactions on biomass yield for greater profitability and to enhance future breeding efforts. Field trials were conducted in two contrasting environments, northern New York and southern Minnesota, to explore changes in shrub willow yield ranking over three harvest cycles across a range of cultivars and diversity groups. Overall, the MN site produced higher, more stable biomass yields than the NY site due primarily to more productive soils, warmer climate, and less weed pressure. However, between-site differences in willow biomass yield were nominal after the second harvest cycle. Yield variability among the top five willow cultivars at each harvest was significantly less than variability among all cultivars regardless of site. Shrub willow cultivars identified in the top-ranking groups were different between sites. Results show that willow can be a viable long-term crop for sustained biomass feedstock production across a wide range of soils and climates but proper cultivar selection is critical for biological and economic success.     

转基因棉花根际土壤DNA的提取方法研究

采用直接裂解方式,通过玻璃珠、溶菌酶和SDS共同作用直接从转基因棉花SGK321和中棉所41的根际土壤中提取微生物DNA。结果表明,该方法能从两种转基因棉花根际土壤中提取到20kb大小的完整的DNA片段。所得DNA完全适用于PCR扩增和酶切的要求。     

Potential of Ipomoea aquatica cultivars in phytoremediation of soils contaminated with di-n-butyl phthalate

Five different genotypic cultivars of Ipomoea aquatica commonly grown in Southeast Asia were cultivated to investigate their accumulation variation of di-n-butyl phthalate (DBP) and their potential for phytoremediation of three soils contaminated with DBP (4.5, 10.3 and 22.5 mg kg^?1). The results indicated different cultivar tolerance to DBP. DBP concentration in the shoots of the cultivars and residual DBP concentration in the soil were proportional to initial DBP concentrations in the soil and significantly different with different genotypic cultivars, indicating that the removal of DBP is cultivar-specific. DBP removal in the soil with indigenous DBP was higher than that in freshly DBP-spiked soils. The cultivars of local white-skin I. aquatica (cultivar V₅) and Taiwan filiform-leaf I. aquatica (cultivar V₁) presented the highest phytoremediation potential in the soil containing indigenous DBP and in freshly DBP-spiked soil, respectively. The translocation factor (TF, DBP concentration ratio of the shoots to the roots) and bioconcentration factor (BCF, DBP concentration ratio of the plant to the soil) also significantly varied with different cultivars, and they did not follow distribution profiles correlated to DBP removal indicating that phytoextraction was not the dominant DBP removal mechanism. Finally, the potential ability of different cultivars of enhancing biodegradation varied widely.     

Linkage between bacterial and fungal rhizosphere communities in hydrocarbon-contaminated soils is related to plant phylogeny

Phytoremediation is an attractive alternative to excavating and chemically treating contaminated soils. Certain plants can directly bioremediate by sequestering and/or transforming pollutants, but plants may also enhance bioremediation by promoting contaminant-degrading microorganisms in soils. In this study, we used high-throughput sequencing of bacterial 16S rRNA genes and the fungal internal transcribed spacer (ITS) region to compare the community composition of 66 soil samples from the rhizosphere of planted willows (Salix spp.) and six unplanted control samples at the site of a former petrochemical plant. The Bray–Curtis distance between bacterial communities across willow cultivars was significantly correlated with the distance between fungal communities in uncontaminated and moderately contaminated soils but not in highly contaminated (HC) soils (>2000 mg kg⁻¹ hydrocarbons). The mean dissimilarity between fungal, but not bacterial, communities from the rhizosphere of different cultivars increased substantially in the HC blocks. This divergence was partly related to high fungal sensitivity to hydrocarbon contaminants, as demonstrated by reduced Shannon diversity, but also to a stronger influence of willows on fungal communities. Abundance of the fungal class Pezizomycetes in HC soils was directly related to willow phylogeny, with Pezizomycetes dominating the rhizosphere of a monophyletic cluster of cultivars, while remaining in low relative abundance in other soils. This has implications for plant selection in phytoremediation, as fungal associations may affect the health of introduced plants and the success of co-inoculated microbial strains. An integrated understanding of the relationships between fungi, bacteria and plants will enable the design of treatments that specifically promote effective bioremediating communities.     

Phosphorus (P) acquisition of cereal cultivars in the field at three levels of P fertilization

Low phosphorus (P) availability in soils and diminishing P reserves emphasize the need to create plants that are more efficient P users. Knowledge of P efficient germplasm among the existing cereal varieties may serve as the basis for improving soil P use by selection and breeding. We had identified some cereal cultivars (winter wheat: Kosack and Kraka; winter barley: Hamu and Angora; spring barley: Canut, Alexis, Salka, Zita;) which differed (p<0.05) in P depletion from thin slices (0.2 mm) of the rhizosphere soil under controlled conditions. In the present study, the same cultivars were studied under field conditions at three levels of P supply (no-P, 10 and 20 kg P ha^-1) and the differences in P uptake as found in the previous work were confirmed. Under both conditions, the variation between the cultivars was greatest in soil without P fertilizers (no-P) for about 30 years. The variation in P uptake with most cultivars disappeared when 10 kg P ha^-1 was applied. Root development did not differ between the cultivars much, but there was wide, consistent variation in their root hairs, regardless of growth media (solution, soil column and field). Increase in soil P level reduced the length of root hairs. The variation in root hairs between the cultivars was largest in no-P soil. When 10 kg P ha^-1 was applied, the root hair lengths did not differ between the cultivars. Barley cultivars with longer root hairs depleted more P from the rhizosphere soil and also absorbed more P in the field. The relationship between root hairs and phosphorus uptake of the wheat cultivars was less clear. The wide variation in P uptake among the barley cultivars in the field and its relationship to the root hair development confirms that root hair length may be a suitable plant characteristic to use as criterion for selecting barley cultivars for P efficiency, especially in low-P soils. This revised version was published online in June 2006 with corrections to the Cover Date.     

Classification and Use of Natural and Anthropogenic Soils by Indigenous Communities of the Upper Amazon Region of Colombia

Outsiders often oversimplify Amazon soil use by assuming that abundantly available natural soils are poorly suited to agriculture and that sporadic anthropogenic soils are agriculturally productive. Local perceptions about the potentials and limitations of soils probably differ, but information on these perceptions is scarce. We therefore examined how four indigenous communities in the Middle Caquetá River region in the Colombian Amazon classify and use natural and anthropogenic soils. The study was framed in ethnopedology: local classifications, preferences, rankings, and soil uses were recorded through interviews and field observations. These communities recognized nine soils varying in suitability for agriculture. They identified anthropogenic soils as most suitable for agriculture, but only one group used them predominantly for their swiddens. As these communities did not perceive soil nutrient status as limiting, they did not base crop-site selection on soil fertility or on the interplay between soil quality and performance of manioc genetic resources.     

15N2 incorporation and acetylene reduction by Azospirillum isolated from rice roots and soils

Summary Nitrogen fixation by strains of Azospirillum isolated from several rice soils and rice cultivars was investigated by¹⁵N₂ incorporation and C₂H₂ reduction. C₂H₂ reducing ability markedly varied among the strains obtained from soils differing widely in their physico-chemical properties. Large variations in¹⁵N₂ incorporation by Azospirillum isolated from the roots of several rice cultivars were also noticed. The present study reveals that rice cultivars harbour Azospirillum with differential N₂-fixing ability and that plant genotype is of importance for optimal associations.     

Effect of potassium nutrition of rice on rhizosphere redox status

With four soils differing in K supplying power and with four rice cultivars (Oryza sativa L.) differing in K uptake kinetic parameters, the relationship between K fertilizer application and soil redox status in rhizosphere and; the distribution of ferrous iron and other toxic substances on the root surface and in the rhizosphere; and the effect of K supply on uptake of reduced iron by rice plants have been studied.The results show that K application on K-deficient soils reduced the content of active reducing substances and ferrous iron in the soil, raised the soil redox potential in the rhizosphere, increased the Eh value of rice roots and lowered the content of iron in the rice plants. These effects of K varied with different rice cultivars. When no K fertilizer was applied, active reducing substances and ferrous iron in rhizosphere soils were decreased more by the rice cultivars absorbing K strongly (e.g. Shanyou 64) than by cultivars absorbing K weakly (e.g. Zhongguo 91). Therefore, the diminution of the toxic substances by K application in the weakly K-absorbing cultivars was more significant.The observation of a rhizobox separated by a nylon screen showed that appreciably more iron oxides, compared with the control, were deposited at or adjacent to the root surfaces of the rice plant supplied with K fertilizer, fully demonstrating the relationship between K nutrition and the total oxidizing power of rice plants. According to the distribution of active reducing substances and ferrous iron, the oxidizing range of the rice root extended in K application treatment a few centimeters away from the root plane. K application to rice affected the soil redox status in rhizosphere in many ways. The main effect was an increase of the oxidizing power of the rice root. As a result, the value of soil Eh was increased, the contents of active reducing substances and ferrous iron were lowered, as well as the number of oxygen consuming microorganisms.     

The Cry1Ab Protein Has Minor Effects on the Arbuscular Mycorrhizal Fungal Communities after Five Seasons of Continuous Bt Maize Cultivation

The cultivation of genetically modified plants (GMP) has raised concerns regarding the plants’ ecological safety. A greenhouse experiment was conducted to assess the impact of five seasons of continuous Bt (Bacillus thuringiensis) maize cultivation on the colonisation and community structure of the non-target organisms arbuscular mycorrhizal fungi (AMF) in the maize roots, bulk soils and rhizospheric soils using the terminal restriction fragment length polymorphism (T-RFLP) analysis of the 28S ribosomal DNA and sequencing methods. AMF colonisation was significantly higher in the two Bt maize lines that express Cry1Ab, 5422Bt1 (event Bt11) and 5422CBCL (MON810) than in the non-Bt isoline 5422. No significant differences were observed in the diversity of the AMF community between the roots, bulk soils and rhizospheric soils of the Bt and non-Bt maize cultivars. The AMF genus Glomus was dominant in most of the samples, as detected by DNA sequencing. A clustering analysis based on the DNA sequence data suggested that the sample types (i.e., the samples from the roots, bulk soils or rhizospheric soils) might have greater influence on the AMF community phylotypes than the maize cultivars. This study indicated that the Cry1Ab protein has minor effects on the AMF communities after five seasons of continuous Bt maize cultivation.     

Trifluralin-induced chlorosis in soybeans (Glycine max (L.) Merr.) grown on clayey,high pH soils

Summary The cause of leaf chlorosis, frequently observed on soybeans (Glycine max (L.) Merr.) grown on high pH soils of the Mississippi Blackland Prairie, is thought to be low Fe availability and restricted rooting. Three greenhouse experiments were conducted using two soils, Sumter, a Rendollic Eutrocrept and Okolona, a Typic Chromudert; nine soybean cultivars differing in Feefficiency; and trifluralin (α-α-α-trifluoro-2,6-dinitro-N, N-di-propyl-p-toludine). Trifluralin at rates greater than 0.56 kg/ha caused chlorosis which was more severe on the Sumter, a soil low in available Fe. Fe-efficient cultivars were more resistant to the chlorosis induced by trifluralin than the Fe-inefficient cultivars. It was concluded that the chlorosis is an Fe deficiency caused by reduced uptake. The herbicide-induced chlorosis can be avoided by proper dosage and placement of the herbicide.