Conspecificity of Elachista nigra and Elachista orbicularis (Elachistaceae, Phaeophyceae)

A taxonomic study of two brown algal species, Elachista nigra Takamatsu and Elachista orbicularis (Ohta) Skinner (Elachistaceae), was performed on the basis of morphological observations of field‐collected and laboratory cultured specimens from Japan (including their type localities) and molecular phylogenetic analyses. The two species had been distinguished by developmental patterns of paraphysis‐ and plurizoidangium‐bearing erect filaments, such filaments of E. nigra developing from wide erect filaments and those of E. orbicularis developing directly from basal prostrate filaments. However, many specimens investigated in the present study showed forms intermediate between these two patterns. Molecular phylogenetic analyses (including five additional elachistacean species) based on the internal transcribed spacer (ITS)2 region of the nuclear ribosomal RNA (nrRNA) gene showed a close relationship between all samples of E. nigra and E. orbicularis, and that the developmental patterns of paraphysis‐ and plurizoidangium‐bearing erect filaments were homoplasious. On the basis of these morphological and molecular data, E. orbicularis was reduced to synonymy with E. nigra. The ITS2 sequences of E. nigra were significantly different between samples from the Sea of Japan and those from the Pacific Ocean with several insertion/deletion and substitution mutations.     

中国鸢尾兰属(兰科)植物二新记录种

该文报道了兰科(Orchidaceae)鸢尾兰属(Oberonia Lindl.)2个中国新记录种,即心唇鸢尾兰(O. orbicularis Hooker f.)和凭祥鸢尾兰(O. delacourii Gagnep.)。其中,心唇鸢尾兰(O. orbicularis)与国内分布的全唇鸢尾兰(O. integerrima)和扁葶鸢尾兰(O. pachyrachis)均较为相似,但该种花葶中下部两侧具狭翅,不与叶合生,唇瓣边缘具明显的啮蚀状齿或细流苏状,先端中部具明显凹缺,可明显区别。心唇鸢尾兰(O. orbicularis)于2013年首次发现于云南省勐腊县,为中国新记录种。凭祥鸢尾兰(O. delacourii)与剑叶鸢尾兰(O. ensiformis)最为相近,但前者唇瓣中裂片先端小裂片近方形,小裂片先端边缘具流苏状齿,可明显区别于后者。凭祥鸢尾兰自1929年发表以来,除模式产地老挝外,至今未见新分布点的报道,为中国新记录种。文中提供了两个新记录种的形态特征描述,凭证标本存放于中国科学院华南植物园标本馆(IBSC)。     

A skeletochronological study of age,growth and longevity in two freshwater turtles,Emys orbicularis and Mauremys rivulata,from Mediterranean Turkey (Reptilia: Testudines)

We estimated growth parameters of Emys orbicularis and Mauremys rivulata in Mediterranean Turkey with the skeletochronological method, using specimens drowned in fyke nets. In adult E. orbicularis, the median age was 8 years in males and 10 years in females. The median age of adult M. rivulata was 10 years for both sexes. Both species reach sexual maturity at an age of 5–7 years. No difference was found in age composition between the sexes.     

Contribution to the occurrence and former distribution of Tephroseris palustris (Compositae) in the Central Europe

Tephroseris palustris (syn. Senecio palustris) is a circumboreal species with large distribution range. The European part of the recent distribution area extends southwards to central France, Germany, Poland, and Ukraine, while in Great Britain, Czech Republic, Hungary, Slovakia, and Romania, T. palustris has been treated as extinct species. The southern boundary of its distribution in Poland does not reach the Carpathian territory. Herbarium specimens, formerly collected in Czech Republic, were found, however, all Czech localities are extinct. No herbarium specimens confirming the old literature data from Slovakia, Hungary, and Romania have been found. Some herbarium specimens coming from this area, and declared as T. palustris (S. palustris), in fact, refer to Senecio paludosus L. Contrary to previous nomenclature review (Jeffrey & Chen 1984), the name Tephroseris palustris (L.) Rchb. seems to be correct (Reichenbach Fl. Saxon.: 146, 1842).     

Patterns of nuclear and mitochondrial DNA variation in Iberian populations of <Emphasis Type="Italic">Emys orbicularis</Emphasis> (Emydidae): conservation implications

The European pond turtle (Emys orbicularis) is threatened and in decline in several regions of its natural range, due to habitat loss combined with population fragmentation. In this work, we have focused our efforts on studying the genetic diversity and structure of Iberian populations with a fine-scale sampling (254 turtles in 10 populations) and a representation from North Africa and Balearic island populations. Using both nuclear and mitochondrial markers (seven microsatellites, ∼1048 bp nDNA and ∼1500 bp mtDNA) we have carried out phylogenetic and demographic analyses. Our results show low values of genetic diversity at the mitochondrial level although our microsatellite dataset revealed relatively high levels of genetic variability with a latitudinal genetic trend decreasing from southern to northern populations. A moderate degree of genetic differentiation was estimated for Iberian populations (genetic distances, F _ST values and clusters in the Bayesian analysis). The results in this study combining mtDNA and nDNA, provide the most comprehensive population genetic data for E. orbicularis in the Iberian Peninsula. Our results suggest that Iberian populations within the Iberian–Moroccan lineage should be considered as a single subspecies with five management units, and emphasize the importance of habitat management rather than population reinforcement (i.e. captive breeding and reintroduction) in this long-lived species.     

Thecamoebians from the small streams of the Boubín area (Šumava Mts,Czech Republic)

From 1999–2005, seventy-eight samples were collected from the small streams in the area of the Boubín Mountain including also the natural preserve “Boubínsky prales” (Boubín primeval forest) (Šumava Mts, Czech Republic). Nineteen species of thecamoebians were identified in the samples; the most abundant species were Centropyxis orbicularis, Pontigulasia compressa, Centropyxis aculeata, Difflugia oblonga and Centropyxis arcula. Species composition of assemblages as well as ecological affinities of the most common taxa are comparable with data from the previously analysed streams in the Šumava Mts. This correlation improves the quality of data for environmental preferences of thecamoebian assemblages contained in the streams and these can be used for interpretation of ancient environments. Though species composition of assemblages changes gradually, two end-member assemblages can be defined. For both assemblages, environmental conditions were defined: Lower-diversity assemblages dominated by centropyxids originated mainly from standing water with low content of organic debris. Relative abundances of C. orbicularis showed negative correlations with abundances of other Centropyxis spp. which may indicate different ecological affinities of this species. Centropyxis orbicularis may tolerate higher levels of fine organic debris in stream sediments. Assemblages with common to abundant occurrences of P. compressa and/or D. oblonga prefer running water. Difflugia oblonga dominated in samples with higher content of fine organic debris. Relation between test size of D. oblonga and flow rate was recorded: large D. oblonga prevailed in standing water while small specimens dominated in fast streams.     

Population structure and gene flow of the syntopic turtles Emys and Mauremys from coastal and inland regions of Anatolia (Turkey): results from mitochondrial and microsatellite data

Revealing the genetic basis of the existence of different species living together in different geographic regions provides clarification of this phylogeographic differentiation. In this study, we investigated the population genetics and evaluated the level of genetic variation of inland and coastal populations of Mauremys and Emys in Turkey. Tissue samples of 196 terrapins were studied which were collected from syntopic coastal (Gölbent-Söke/Ayd?n; M. rivulata and E. orbicularis) and inland populations (Bahçesaray/Aksaray; M. caspica and E. orbicularis). DNA was isolated using the InnuPREP DNA Mini Kit. Mitochondrial DNA sequences and allelic variation at 13 microsatellite loci for Mauremys and 12 microsatellite loci for Emys were examined.  Three haplotypes were found for Emys orbicularis (Im, Ip and Iw) collected from the coastal region and two haplotypes for Emys orbicularis (Ig and Im) collected from inland. Two haplotypes were identified for M. caspica (Cmt8 and Cmt9) and three haplotypes were identified for M. rivulata (Rmt3, Rmt24 and Rmt26). Using microsatellites and the software STRUCTURE the most probable value for K was revealed as two 2 for both species. The F_ST value between M. rivulata and M. caspica was 0.39, and between the coastal and inland populations of E. orbicularis 0.09. It can be concluded that Emys populations tend to evolve by somehow preserving the allelic richness they have and Mauremys populations continue to differentiate so that new species emerge in the evolutionary process to reach the ideal allelic structure.

     

Pelagic to demersal transition in a coral‐reef fish,the orbicular batfish Platax orbicularis

Behavioural and ecological observations were made on young, reared Platax orbicularis in Opunohu Bay, Moorea, French Polynesia, during their transition from the pelagic, dispersive stage to the reef‐orientated demersal stage. Seventy‐two young P. orbicularis (17–75 mm standard length, L_S) were released in the pelagic zone and 20 (40–70 mm L_S) adjacent to the reefs. Swimming speed was slow (mean 5·2 cm s^?1) and independent of size. An ontogenetic descent was observed: the smallest P. orbicularis swam at the surface, medium‐sized P. orbicularis swam in midwater (mean 5–13 m) and the largest P. orbicularis swam to the bottom, where many lay on their sides. Platax orbicularis swam southerly on average, away from the ocean and into the bay. Smaller P. orbicularis were more likely to swim directionally than larger individuals. Young P. orbicularis released near reef edges swam at similar, but more variable speeds (mean 6·6 cm s^?1). About half of those released near reefs swam away, but fewer swam away from an inshore fringing reef than from a patch reef near the bay mouth. Many P. orbicularis swam up the slope onto the reef top, but the little settlement observed was near the reef base. Average, near‐reef swimming direction was also southerly. Some reef residents, in particular the triggerfish Balistapus undulatus, harassed young P. orbicularis.     

Larvae of chigger mites Neotrombicula spp. (Acari: Trombiculidae) exhibited Borrelia but no Anaplasma infections: a field study including birds from the Czech Carpathians as hosts of chiggers

Chigger mites were collected from 1,080 wild birds of 37 species at Certak (Czech Republic), in the western Carpathian Mountains, from 29 July to 24 September 2005. The prevalence of infestation with chigger larvae was 7%. A total of 325 chigger specimens from 10 bird species was identified and three chigger species were found: Neotrombicula autumnalis, N. carpathica, and N. inopinata, the latter two species being reported on new hosts. Neotrombicula carpathica is reported in the Czech Republic for the first time. A total of 509 chigger larvae found on 79 host specimens were examined by polymerase chain reaction (PCR) for the presence of Borrelia burgdorferi s.l. DNA (fragments of the rrf (5S)—rrl (23S) intergenic spacer), and Anaplasma phagocytophilum DNA (epank1 gene). A fragment of specific Borrelia DNA was amplified through PCR in one sample, and the PCR product was further analyzed by reverse line blotting assay, whereby both genospecies of B. garinii and B. valaisiana were proved. This sample pooled five chigger larvae collected from one Sylvia atricapilla on 11 August 2005. No A. phagocytophilum DNA was amplified. We conclude that larvae of the genus Neotrombicula can be infected with Borrelia genospecies originated from their present or former hosts.     

Variability in cuticular hydrocarbons and phenotypic discrimination of Ixodes ricinus populations (Acarina: Ixodidae) from Europe

The cuticular hydrocarbon composition and a stepwise discriminant analysis are used to elucidate the phenotypic relationships of 66 populations of Ixodes ricinus in Europe. The method correctly allocates Ixodes persulcatus (outgroup) populations away from the main cluster of I. ricinus samples and separates the samples into ten relatively defined clusters of specimens. Populations from Poland are inseparable from samples collected in Germany, Switzerland and the Italian Alps, while individuals from Slovakia and the Czech Republic come into separate groups of phenotypic similarity. Irish and British specimens are separated but highly related and Spanish populations show an unexpectedly high distance from the remaining clusters.     

Distribution of mitochondrial haplotypes (cytb) in Polish populations of Emys orbicularis (L., 1758)

The European pond turtle, Emys orbicularis, inhabits a wide distribution area in the western Palaearctic. Polish populations of pond turtle represent the nominotypical subspecies Emys orbicularis orbicularis. The mitochondrial DNA haplotype (cytb gene) variation among 131 turtles from 26 locations in five regions of Poland was investigated. Five haplotypes belonging to three distinct lineages were identified. Two clades (I and II) were represented by two haplotypes each, while the other clade (IV) was represented by one haplotype. Three haplotypes were reported for the first time in E. orbicularis. The eastern part of Poland is inhabited exclusively by turtles bearing haplotype Ia. The remaining four sequence variants were recorded in western Poland where only the IIb haplotype is considered endemic. The distribution of the other haplotypes in western Poland could thus reflect past introductions or accidental releases. The authors regarded the two locations (Drzeczkowo and Karpicko) that were first included in the western Poland populations as autochthonous catchment areas of haplotype Ia.     

Synopsis of Grimmia Hedw. in New Zealand,including Grimmia wilsonii sp. nov.

Abstract

The New Zealand Grimmia Hedw. specimens from AK, AKU, BM, CHR, OTA and WELT have been revised and a bryological field trip to the New Zealand Southern Alps was made to study specimens in their natural habitats. As a result of the revision and the field trip, G. anodon, G. austrofunalis, G. orbicularis and G. tortuosa were added to the moss flora. A key is presented, the species are briefly discussed and Grimmia wilsonii H.C. Greven sp. nov. is described and illustrated.     

Some like it cold: the glossiphoniid parasites of the Sicilian endemic pond turtle Emys trinacris (Testudines,Emydidae), an example of ‘parasite inertia’?

The freshwater turtles of the genus Emys and some leech species of the family Glossiphoniidae are the only Palaearctic representatives of primarily Nearctic taxa, which jointly colonized Eurasia and the Maghreb during the Miocene. The strict trophic relationships occurring between the glossiphoniid parasite leech Placobdella costata and its host, the emydid Emys orbicularis, make them a prime example of host–parasite cophylogenetic evolution. In the light of the discovery of the Sicilian cryptic endemic species Emys trinacris, which is the sister species to the widespread Palaearctic E. orbicularis, the possible cophylogenetic divergence of the turtle hosts and their leech parasites was investigated. In spite of the deep divergence scored between the two pond turtle species and of their allopatric distribution, their leech parasites proved to be conspecific and indistinguishable based on the implemented molecular marker. This unexpected decoupling might likely be ascribed to the different dispersal abilities of the two taxa and/or to the recent, human‐mediated introduction of the leech parasites in Sicily. If this last scenario is confirmed, the long‐term effects of the introduced leech parasite on the endemic Sicilian pond turtle Emys trinacris should be carefully monitored. In the frame of this study, representatives of the widely spread predatory leech Helobdella stagnalis were observed on E. trinacris. Molecular analyses of their stomach content allowed to rule out the possibility of the existence of a trophic relationships between these two taxa, in contrast to what was previously suspected, and suggest that H. stagnalis specimens were rather attached to the turtles for non‐nutritional reasons.     

Big data can cause big mistakes: using the Societas Europaea Herpetologica atlas by Sillero et al. (2014), the distribution of <Emphasis Type="Italic">Emys orbicularis</Emphasis> will be misunderstood

Problems with the reliability of the distribution map for Emys orbicularis in the online atlas of European amphibians and reptiles (NA2RE) are highlighted. Two distinct species (E. orbicularis, E. trinacris) are lumped together there. For E. orbicularis, many regions are included into the native distribution range where the species does not occur naturally. On the contrary, records are missing for vast parts of the native range. Using data from the NA2RE atlas cannot be recommended presently, especially not for species distribution modelling.     

Eretes diving beetles (Coleoptera: Dytiscidae) in Central Europe – witnesses of climate change?

Records of the predaceous diving beetles of the genus Eretes Laporte, 1833 (Coleoptera: Dytiscidae) in Central Europe are summarised. While old records from the beginning of the twentieth century from the Czech Republic, Hungary, and Romania belong to Eretes griseus (Fabricius, 1781), a species which has not been recaptured in Central Europe for nearly the last hundred years, recently collected specimens from Hungary and Slovakia belong to E. sticticus (Linnaeus, 1767) and represent its first records in these countries as well as in Central Europe. The first specimens were collected at light during hot summer nights and may document a recent spreading of the species from the Mediterranean. In addition, the occurrence of E. sticticus is formally confirmed in Bulgaria, Croatia, Greece, Israel, Libya, South European Territory of Russia, and Tunisia.     

Isolation of microsatellite markers in the Emys orbicularis complex and development of multiplex PCR amplification

We report the development of 15 new microsatellite markers for Emys orbicularis and Emys trinacris. A survey of 20 individuals showed that all loci are highly polymorphic with 3–14 alleles per locus. Additionally, 22 Glyptemys muhlenbergii primers were checked for cross-species amplification, with 14 being amplified successfully and polymorphic (2–14 alleles). A set of eight markers was selected and combined into two multiplex PCRs. Levels of genetic diversity were assessed in 648 individuals covering the complete distribution area. The number of alleles ranged from 13 to 24 and observed heterozygosity varied between 0.515 and 0.852.     

First record of the brown lanternshark,Etmopterus unicolor, from the waters around New Zealand, and comparison with the southern lanternshark,E. granulosus

Specimens of the brown lanternshark,Etmopterus unicolor, reported here for the first time from the waters around New Zealand, were caught on bottom longlines. This study compares morphometeric and meristic characters of New Zealand and Japanese specimens ofE. unicolor and New Zealand specimens of the southern lanternshark,E. granulosus. E. unicolor andE. granulosus are clearly distinguishable by the height of the first dorsal fin, number of spiral valves, number of vertebrae, and shape of the dermal denticles and teeth.     

Identity of a powdery mildew fungus occurring on Paeonia and its relationship with Erysiphe hypophylla on oak

A powdery mildew fungus found on Paeonia lutea at the Botanical Garden of Geneva (Switzerland) was identified as Erysiphe hypophylla based on morphological observations. The occurrence of E. hypophylla on Paeonia seemed curious, because host plants of this species have been restricted to a few Quercus species of the family Fagaceae. In this study, we determined the rDNA sequences of the powdery mildew specimens on Paeonia and E. hypophylla on Quercus to confirm the identity of the Paeonia fungus. The three sequences from the specimens on P. lutea were identical to one another in both ITS and 28S rDNA regions and also to the sequences of E. hypophylla on Q. robur, which supports the identification that the fungus on P. lutea is E. hypophylla. However, these sequences were also identical to the sequences of E. alphitoides on Quercus spp. and Oidium mangiferae on mango. This result suggests a possibility that E. hypophylla is conspecific to E. alphitoides. Further study is required to clarify whether E. hypophylla is a synonym of E. alphitoides or a distinct species.