The impacts of habitat disturbance on adult and larval dragonflies (Odonata) in rainforest streams in Sabah,Malaysian Borneo

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Diversity and occupancy of small carnivores within oil palm plantations in central Sumatra,Indonesia

In Southeast Asia, the conversion of native forests to oil palm plantations threatens tropical biodiversity, but very little is known about the impacts of oil palm cultivation on small carnivore species. To determine the diversity and occupancy of small carnivores within oil palm plantations and to investigate possible factors that might affect their presence within oil palm, we used camera-traps within two oil palm plantations in central Sumatra, analysed the data using occupancy modelling and tested whether two covariates (distance to the edge of the oil palm habitat and distance from extensive areas of lowland forest) affected the model parameters for each small carnivore species. From 3164 camera-trap days, we detected only three small carnivores: leopard cat (Prionailurus bengalensis), common palm civet (Paradoxurus hermaphroditus) and Malay civet (Viverra tangalunga), which indicates that there was a low diversity of small carnivores within the oil palm plantations. Both the leopard cat and common palm civet were found deep within the oil palm, whereas the Malay civet was only detected near the edge in one of the plantations. The leopard cat and common palm civet had very high occupancy values, whereas the Malay civet had low values for both occupancy and detection probability. Neither covariate affected occupancy of the leopard cat and common palm civet, but distance from the edge of the oil palm habitat did influence their detection probabilities. Malay civet occupancy decreased with distance from the oil palm edge, and detection probability was affected by distance from extensive areas of lowland forest. Forests and rest/den site availability are suggested to be important features for small carnivores with oil palm-dominated landscapes.     

Survival strategies of a frugivore,the sun bear,in a forest-oil palm landscape

As large areas of forest are lost throughout the tropics, prime habitat of many species decline and become fragmented. The island of Borneo is a prime example, with accelerated clearing of forests primarily for oil palm expansion. Borneo is recognized as an important stronghold for the conservation of the sun bear (Helarctos malayanus), but it is unclear how habitat reduction and fragmentation is affecting this frugivore. We used camera traps and sign surveys to understand patterns of sun bear habitat use in a matrix of fragmented forests and extensive oil palm development, which has existed as such for?>?15 years: the Lower Kinabatangan floodplain in Sabah, Malaysian Borneo. Within these small forest fragments, squeezed between a major river and oil palm plantations, bears exhibited selection for areas farther from human activity (plantations, river boat traffic, and buildings), and were rarely active during the day, demonstrating both spatial and temporal avoidance of potential human-related threats. They selected large trees to feed and rest, and also exploited adjacent plantations to feed on oil palm fruits. We conclude that even relatively small forest fragments (~?2000 ha) within large agricultural landscapes can be important for sun bears. Our research highlights the remarkable adaptations this species has employed to persist in a drastically modified landscape.     

Effects of habitat type change on taxonomic and functional composition of orchid bees (Apidae: Euglossini) in the Brazilian Amazon

Land use change impact species richness and functional diversity (FD). In the Brazilian Amazon, we examined the impacts of oil palm plantations on orchid bee (Apidae: Euglossini) species using abundance and FD. We collected male orchid bees in oil palm plantation (PALM), legal reserves (LR), and riparian corridors (APP), and then we used morphological and life-history traits to characterize each species. We evaluated differences in bee body size by comparing intertegular span values. We tested the influence of habitat on taxonomic and functional parameters of orchid bees by applying a partial redundancy analysis (pRDA). We contrasted FD by calculating species richness, functional richness, and functional dispersion. We sampled 1176 bees from 30 species in 18 sampling days across 2015 and 2016. Males from PALM were 13.6% bigger than those in LR areas, and bees from APP showed a similar pattern compared to LR and PALM. Less than 15% of the variation in species composition was related to the distance among sampling sites, and 8% was due to habitat structure. In our pRDA, the spatial difference explained 6% of the variation in orchid bee traits, but there were no effects of habitat parameters upon FD. FD was reduced with land use change caused by oil palm plantations. Our findings support the belief that many bees are impacted by cultivated lands. Nevertheless, the functional similarity between LRs and APPs reflects common structural elements between them, although we did not find significant relationship between functional composition and habitat structure that we evaluated.     

Effects of Logging and Oil Palm Expansion on Stream Frog Communities on Borneo,Southeast Asia

The conversion of tropical rain forests to oil palm plantations is a major threat to Southeast Asia's rich biodiversity. Fostering forest species communities in secondary forests, agroforestry systems, and plantations is therefore increasingly becoming a conservation focus. This study uses standardized transect‐based sampling to compare species richness, density and community composition of stream anuran assemblages among primary forests, repeatedly logged forests and oil palm plantations in northern Borneo. In primary forest streams, we recorded an average of 19 frog species, compared to 15 species in logged forests and 11 species in oil palm plantation streams. However, the high percentage of canopy cover above the plantation streams mitigated this loss to some extent. This study corroborates numerous studies that oil palm plantations have mainly negative effects on the region's biodiversity. However, our results also demonstrate the high conservation value of logged forests for Bornean stream‐dependent anurans. We conclude that palm plantations have a largely unused potential to promote regional anuran biodiversity.     

Adult tiger spiketail (<Emphasis Type="Italic">Cordulegaster erronea</Emphasis> Hagen) habitat use and home range observed via radio-telemetry with conservation recommendations

The Tiger Spiketail dragonfly (Cordulegaster erronea Hagen) is geographically restricted to the eastern half of North America, patchily distributed within the range and a habitat specialist of small spring and seepage fed headwater streams running through mature forest. These habitats are highly sensitive to disturbance and the Tiger Spiketail is of conservation concern throughout most of its range. Yet little is known about the habitat use of either sex away from the breeding stream hampering conservation strategies. In this study we use miniaturized radio transmitters to investigate the habitat use and home range of individual males and a female Tiger Spiketail in New Jersey. This is the first and only radio-telemetry for this species. We also provide recommendations for habitat protection and conservation. Our studies demonstrate that this species is critically dependent upon mature forest and the high quality, perennial headwater streams that run through them. These habitats are particularly sensitive to disturbance. Except when patrolling and ovipositing, both sexes are in the canopy above the breeding stream and in the adjacent mature forest, indicating the inseparable linkage between the aquatic and forested terrestrial habitat for this species. Our observations also suggest that C. erronea occurs in a metapopulation of nearby streams in our study area. Conservation of this species may therefore require forest protection far beyond the breeding stream. In New Jersey, and in other places throughout the range, there are many potential pressures on these habitats and current regulatory protections are not likely suitable. These same habitats may also be important for other Odonate species of conservation concern suggesting that protection of C. erronea may benefit a suite of species. We hope the information obtained from this study can assist resource managers in developing conservation and habitat protection measures.     

Accompanying vegetation in young <Emphasis Type="Italic">Pinus radiata</Emphasis> plantations enhances recolonization by <Emphasis Type="Italic">Ceroglossus chilensis</Emphasis> (Coleoptera: Carabidae) after clearcutting

The replacement of native forests by Pinus radiata plantations modifies habitat availability and quality for wildlife, constituting a threat to species survival. However, the presence of understory in mature pine plantations minimizes the negative impacts of native forest replacement, rendering a secondary habitat for wildlife. Whether forest-dwelling species recolonize clear-felled areas pending on the spontaneous development of accompanying vegetation growing after harvesting is yet to be assessed. In this context, we analyze the abundance, movement and habitat selection of the endemic ground beetle Ceroglossus chilensis (Coleoptera: Carabidae) in an anthropic forest landscape consisting of native forest remnants, adult pine plantations (>?20 years) with a well-developed understory, and young (1–2 years) pine plantations with varying degrees of accompanying vegetation development. Particularly, we analyze the likelihood that C. chilensis would recolonize young pine plantations depending on the presence (>?70% cover) or the absence (<?20% cover) of this accompanying vegetation. C. chilensis shows a greater probability of selecting habitats with understory (pine plantations and native forest) and young plantations with accompanying vegetation (future understory) than habitats without such vegetation. Movement of C. chilensis also favors their permanence in habitats with understory vegetation, coinciding with higher abundances than in young pine plantations devoid of accompanying vegetation. Hence, the effect of clearcutting could be mitigated by allowing the development of accompanying vegetation into a future understory, which facilitates the recolonization of pine plantations and its use as secondary habitat for wildlife.     

Carnivore mammals in a fragmented landscape in northeast of São Paulo State,Brazil

São Paulo is the most developed state in Brazil and little of its native vegetation remains. In Luiz Antonio and Santa Rita do Passa Quatro municipalities, only small fragments of cerrado (Brazilian savanna) physiognomies (cerradão, cerrado sensu stricto) and of semideciduous forest have been left, surrounded by eucalyptus silviculture and sugar-cane agriculture. However, that vegetation mosaic still shelters large mammals, including several carnivore species. To detect the carnivores present in such a mosaic area (50,000 ha), and to find out how they use the landscape, we recorded them through 21 camera traps and 21 track plots, during 18 months. Species richness, diversity and relative frequency were evaluated according to the habitat. Ten species were recorded, some of them locally threatened to extinction (Puma concolor, Leopardus pardalis, Chrysocyon brachyurus). Species diversity did not significantly differ among fragments, and although most species preferred one or another habitat, the carnivore community as a whole explored all the study area regardless of the vegetation cover; eucalyptus plantations were as used by the carnivores as the native fragments. Therefore, it seems possible to maintain such animals in agricultural landscapes, where some large native fragments are left and the matrix is permeable to native fauna.     

Can <Emphasis Type="Italic">Pinus</Emphasis> plantations facilitate reintroduction of endangered cloud forest species?

Coniferous plantations have been widely used by reforestation programs seeking to mitigate the effects of deforestation in mountainous areas in different parts of the world. However, some studies show that pine plantations can simulate natural mechanisms of succession, thereby facilitating the incorporation of other native species of mid- and late-successional stages. Existing pine plantations could function as a substitute habitat and facilitate the establishment of native and endangered cloud forest species. To test this hypothesis, we planted two endangered species from the family Juglandaceae (Juglans pyriformis and Oreomunnea mexicana) under twelve-year-old canopy plantations of Pinus patula and compared them to individuals planted in open (control) sites and recorded their survival and growth. The results show that the survival of J. pyriformis and O. mexicana was significantly higher below the canopy of P. patula plantations than in the open site. However, growth rates varied significantly among species and sites. Although pine plantations may favor the survival of seedlings, they cannot ensure the growth of plants without additional forest management.     

Assessing resource and predator effects on habitat use of tropical small carnivores

Habitat use of animals is influenced by a combination of factors including food abundance and interactions with other species. Animals typically must forage while simultaneously avoiding predation from multiple potential predators, but habitat use in tropical forest ecosystems that assesses effects of both predation risk and resources has rarely been conducted. We used camera traps and occupancy analyses to document small mammalian carnivore occurrence in relation to food abundance and interactions with large predators. We hypothesized that habitat use of six small mammalian carnivores (≤15 kg) would be influenced by (1) abundance of resources (fruit, rodents, and streams) and/or (2) large predators. Predictions regarding food and habitat resources were only supported for one species (crab-eating mongoose, Urva urva), which was positively associated with rodents and streams. Three small carnivores (masked palm civet Paguma larvata, common palm civet Paradoxurus hermaphroditus, yellow-throated marten Martes flavigula) were affected negatively by leopard and mesopredators as predicted. Counter to our predictions, two species (masked palm civet and yellow-throated marten) showed spatial avoidance of tiger suggesting that an apex predator might also pose predation risk to small carnivores. The focal small carnivores and large predators of this study appeared to have moderately to highly overlapping temporal activity indicating no temporal avoidance. In conclusion, food resources appeared to have minimal effects for six small carnivores in this ecosystem probably due to continuous resource availability. Predation risk appeared to affect some species in terms of spatial occupancy but not in temporal activity, indicating perhaps complex, but not entirely negative interactions between larger carnivores and this guild of small carnivores. The mechanisms which facilitate co-occurrence between small carnivores and large predators may, however, operate at finer spatiotemporal scales than we investigated here.     

Morphological traits mediate fish occurrences in oil palm-impacted tropical streams

1. Land-use change is a leading driver of biodiversity loss, especially in tropical fresh waters where the conversion of natural forest to monoculture plantations impacts freshwater fish assemblages. The environmental pathways underpinning shifts in fish assemblages, however, are poorly understood, but could potentially be inferred from trait–environment relationships.
2. We addressed this knowledge gap using eco-morphological traits to explain fish occurrences in oil palm-impacted streams of the Endau drainage in Peninsular Malaysia. We also investigated how traits relate to differences in environmental conditions associated with land-use change. We then integrate findings from the above to test how potential pathways of land-use driven environmental changes can impact species occurrences through effects on life history, feeding habits, and mobility.
3. Mixed-effects models show that fishes with superior (upward-facing) mouths and low body mass were more likely to occur in oil palm streams than forest streams, and these traits were associated with grass-dominated riparian zones and reduced woody debris in oil palm streams, respectively. Structural equation models show that mouth positions statistically mediated the effect of riparian vegetation on fish species occurrences in oil palm streams. Specifically, fishes with superior mouths were more likely to feed on terrestrial invertebrates.
4. Our analysis of easily measurable traits revealed pathways of land-use impact that are potentially more widely applicable than conventional taxa-based approaches. Fishes with superior mouths tended to occur in oil palm streams as they were able to more effectively exploit inputs of terrestrial invertebrates that are potentially associated with grass-dominated riparian vegetation.
5. Moreover, shifts in traits may suggest land-use driven changes in stream ecosystem functioning (e.g. in terms of the role of terrestrial subsidies), thereby informing targeted management actions in land-use impacted habitats (e.g. retention/restoration of riparian trees).

     

The impact of bird herbivory on macrophytes and the resilience of the clear-water state in shallow lakes: a model study

Land-use change associated with human development can alter aquatic habitat and imperil aquatic species. Fish are challenged when urban streams are altered, for example for stormwater conveyance, but little is known about how such activities influence the space use of individual fish. Electronic tagging and experimental displacement of fish can be used to explore site fidelity and homing behaviour of fish and can therefore be useful for testing hypotheses about space use and habitat selection. In this study, we used experimental displacement to determine how longnose dace (LND, Rhinichthys cataractae) utilize reaches within a watershed that have varying degrees of degradation. LND were tagged using passive integrated transponders (PIT tags), transported upstream, and released either into the natural stream reach, impaired stormwater drain reach, or at their confluence. Fixed PIT antennas were used to monitor movement of the PIT-tagged fish among the three reaches for a period of 3 weeks. LND exhibited dramatic and rapid selection against the stormwater drain. No LND moved into the drain and 97% of fish transported to the drain left within 24 h. LND were actively avoiding the stormwater drain, emphasizing the need for enhancement work to improve the biological connectivity of the system.     

Effects of habitat features on size-biased predation on salmon by bears

Predators can drive trait divergence among populations of prey by imposing differential selection on prey traits. Habitat characteristics can mediate predator selectivity by providing refuge for prey. We quantified the effects of stream characteristics on biases in the sizes of spawning salmon caught by bears (Ursus arctos and U. americanus) on the central coast of British Columbia, Canada by measuring size-biased predation on spawning chum (Oncorhynchus keta) and pink (O. gorbuscha) salmon in 12 streams with varying habitat characteristics. We tested the hypotheses that bears would catch larger than average salmon (size-biased predation) and that this bias toward larger fish would be higher in streams that provide less protection to spawning salmon from predation (e.g., less pools, wood, undercut banks). We then we tested for how such size biases in turn translate into differences among populations in the sizes of the fish. Bears caught larger-than-average salmon as the spawning season progressed and as predicted, this was most pronounced in streams with fewer refugia for the fish (i.e., wood and undercut banks). Salmon were marginally smaller in streams with more pronounced size-biased predation but this predictor was less reliable than physical characteristics of streams, with larger fish in wider, deeper streams. These results support the hypothesis that selective forces imposed by predators can be mediated by habitat characteristics, with potential consequences for physical traits of prey.     

Bird assemblages in pine plantations replacing native ecosystems in NW Patagonia

Forest plantations of exotic conifers represent an important economic activity in NW Patagonia, Argentina. However, there is a remarkable lack of information on the impact of forestry on native biodiversity. We analyzed the effect of Pinus ponderosa plantations on bird communities, considering different stand management practices (dense and sparse tree covers), and different landscape contexts where they are planted (Austrocedrus chilensis forest and steppe). Ultimately we wished to assess in which way plantations may be designed and managed to improve biodiversity conservation. Bird richness and abundance did not change significantly in the steppe, although community composition did, and was partially replaced by a new community, similar to that of ecotonal forests. In contrast, in the A. chilensis forest areas, species richness decreased in dense plantations, but bird community composition remained relatively constant when replacing the native forest with pine plantations. Also, in A. chilensis forest, stand management practices aiming at maintaining low tree densities permit the presence of many bird species from the original habitat. In the steppe area in turn, both dense and sparse plantations are unsuitable for most steppe species, thus it is necessary to manage them at higher scales, maintaining the connectivity of the native matrix to prevent the fragmentation of bird populations. We conclude that pine plantations can provide habitat for a substantial number of native bird species, and this feature varies both with management practices and with the landscape context of areas where afforestation occurs.     

Tree community structure reflects niche segregation of three parapatric squirrel monkey species (<Emphasis Type="Italic">Saimiri</Emphasis> spp.)

Integration between ecology and biogeography provides insights into how niche specialization affects the geographical distribution of species. Given that rivers are not effective barriers to dispersal in three parapatric species of squirrel monkeys (Saimiri vanzolinii, S. cassiquiarensis and S. macrodon) inhabiting floodplain forests of Central Amazonia, we tested whether forest structure and tree diversity may explain species differences in niche specialization and spatial segregation. We sampled 6617 trees of 326 species in three habitats (high várzea, low várzea and chavascal) used by three Saimiri species, and estimated tree species richness in each of them. For each tree, we measured variables known to influence habitat use in primates, such as crown area and presence of lianas, epiphytes and hemi-epiphytes. We used ANOVA to compare these variables and performed multivariate analyses (NMDS, ANOSIM and SIMPER) to evaluate dissimilarities in forest structure among each habitat inhabited by the three Saimiri species. We identified differences in the tree species richness, crown area and presence of lianas, epiphytes and hemi-epiphytes between the three habitats for all Saimiri species. NMDS demonstrated that areas of high and low várzeas occupied by S. vanzolinii were clearly separated from the other species. We also found that different plant species contributed to dissimilarity among Saimiri ranges. Our findings support the hypothesis that tree community structure may promote niche specialization and spatial segregation among primates. We discuss how these patterns could have been favored by historical changes in forest flood patterns, the evolutionary history of Saimiri spp., and past competition.     

Neotropical moth assemblages degrade due to oil palm expansion

Oil palm is one of the most rapidly expanding crops throughout the tropics, yet little is known about its impacts on Neotropical invertebrate biodiversity. Responses of insect assemblages to land conversion may substantially vary among taxa. We assessed geometrid and arctiine moth assemblages in a Costa Rican human dominated landscape, where oil palm plantations are now the second most common land cover. Moths were sampled during 6 months with automatic traps in the interior and margin of old-growth forests, young secondary forests and oil palm plantations in a 30 km² area. Our results show that richness and diversity of both taxa were severely reduced in oil palm compared to all other habitats. Geometrid abundance was highest in forest interiors and lowest in oil palm, while arctiine numbers did not differ between habitats. Dominance was highest in oil palm plantations, where one arctiine species and one geometrid species accounted for over 40% of total abundance in each of their respective taxa. Species composition was distinct in oil palm and forest interior sites, and depicted a gradient of habitat disturbance in ordination space that was strongly related to vegetation diversity and structure. This study demonstrates that oil palm plantations are not a suitable habitat for these moth taxa. Whilst some arctiine species seem adapted to disturbed habitats, geometrids were more dependent on old-growth forests, showing higher bioindicator potential. In the face of accelerated oil palm expansion, conservation strategies should focus on protecting old-growth forest remnants, as well as increasing species diversity and structural complexity of degraded habitats.     

The role of planted forests in the provision of habitat: an Irish perspective

The continued decline of natural forests globally has increased interest in the potential of planted forests to support biodiversity. Here, we examine the potential conservation benefits of plantation forests from an Irish perspective, a country where remaining natural forests are fragmented and degraded, and the majority of the forest area is comprised of non-native Sitka spruce (Picea sitchensis (Bong.) Carr.) and Norway spruce (Picea abies (L.) Karst.) plantations. We examine the true value of Irish plantation forests to native biodiversity, relative to remaining natural forest fragments, and to prior and alternative land use to afforestation. We find that plantation forests provide a suitable surrogate habitat primarily for generalist species, as well as providing habitat for certain species of conservation concern. However, we find that plantation forests provide poor habitat for native forest specialists, and examine potential management strategies which may be employed to improve habitat provision services for this group.     

Diversity of fish species in suichuan river and shushui river and conservation value,China

Based on the data collected from the Suichuan and Shushui Rivers, both tributaries of the Ganjiang River between April and July of 2015, the fish species identified were classified into 68 and 46 species, 14 and 12 families in the Suichuan River and Shushui River respectively. Cyprinidae is the most common family that accounts for 52.9% and 58.7% in the total number of fish species in the Suichuan River and Shushui River, respectively. The dominant species were Pseudohemiculter dispar, Squalidus argentatus, Silurus asotus and Leptobotia elongate for the Suichuan River and Squalidus argentatus, Acrossocheilus parallens, Pseudohemiculter dispar, Silurus asotus, Pelteobagrus fulvidraco, Acrossocheilus fasciatus and Zacco platypus for the Shushui River. The diversity of fish species showed more abundant and diverse for the Suichuan River. The composition of ecotype of fish indicated the rich diversities of ecotype in both the Suichuan and Shushui Rivers. The tributary (Suichuan River) and main stream of the Ganjiang River demonstrated a highly fauna similarity and the fish resources indicated its significance to maintain the fish diversity in the middle of the Ganjiang River and its benefits to the existence of the fish species in mountain streams. Dam construction, sand excavation and heavy metal pollution are the most significant threat to fish diversity and ecosystem functioning in Ganjiang River basin. In order to protect fish diversity and fisheries more effectively, relevant laws should be strengthened and conservation areas should be established for the survival of freshwater fish species.     

Effects of reduced‐impact logging on physical habitat and fish assemblages in streams of Eastern Amazonia

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Tree squirrel habitat selection and predispersal seed predation in a declining subalpine conifer

Differential responses by species to modern perturbations in forest ecosystems may have undesirable impacts on plant-animal interactions. If such disruptions cause declines in a plant species without corresponding declines in a primary seed predator, the effects on the plant could be exacerbated. We examined one such interaction between Pinus albicaulis (whitebark pine), a bird-dispersed, subalpine forest species experiencing severe population declines in the northern part of its range, and Tamiasciurus hudsonicus (red squirrel), an efficient conifer seed predator, at 20 sites in two distinct ecosystems. Hypotheses about squirrel habitat preferences were tested to determine how changes in forest conditions influence habitat use and subsequent levels of predispersal cone predation. We performed habitat selection modeling and variable ranking based on Akaike’s information criterion; compared the level and variance of habitat use between two forest types (P. albicaulis dominant and mixed conifer); and modeled the relationship between P. albicaulis relative abundance and predispersal cone predation. T. hudsonicus did not demonstrate strong habitat preference for P. albicaulis, and thus, declines in the pine were not met with proportional declines in squirrel habitat use. P. albicaulis habitat variables were the least important in squirrel habitat selection. Squirrel habitat use was lower and varied more in P. albicaulis-dominant forests, and predispersal cone predation decreased linearly with increasing P. albicaulis relative abundance. In Northern Rocky Mountain sites, where P. albicaulis mortality was higher and abundance lower, squirrel predation was greater than in Central Rocky Mountain sites. In ecosystems with reduced P. albicaulis abundance, altered interactions between the squirrel and pine may lead to a lower proportion of P. albicaulis contributing to population recruitment because of reduced seed availability. Reducing the abundance of competing conifers will create suboptimal squirrel habitat, thus lowering cone predation in P. albicaulis and ensuring more seeds are available for avian dispersal.