Population variability of nonacosan-10-ol and n-alkanes in needle cuticular waxes of Macedonian pine (Pinus peuce GRISEB.)

This is the first report on population variability of nonacosan-10-ol and n-alkanes in needle epicuticular waxes of Macedonian pine (Pinus peuce GRISEB.) Hexane extracts of needle samples, originating from two natural populations in Montenegro (Zeletin and Sjekirica) and from one population in Serbia (Mokra Gora) were analyzed by gas chromatography (GC) and gas chromatography/mass spectrometry (GC/MS). The amount of nonacosan-10-ol varied individually from 41.3 to 72.31% (average 55.9%), with the Sjekirica population being statistically divergent (64.4% on average). The results showed n-alkanes in epicuticular waxes ranging from C?? to C??. The most abundant alkanes were C??, C??, C??, and C?? (15.5, 11.1, 10.6, and 10.5% on average, resp.). The carbon preference index of Pinus peuce ranged from 1.0 to 4.3 (1.9 on average). Average chain length ranged from 18.4 to 27.7 (average 25.7). A high level of inidividual quantitative variation in all of these hydrocarbon parameters was also detected. These results were compared with published data on other species from the Pinus genus.     

Chemodiversity of Nonacosan‐10‐ol and n‐Alkanes in the Needle Wax of Pinus heldreichii

This is the first report of individual variability and population diversity of the contents of nonacosan‐10‐ol and n‐alkanes in the needle cuticular waxes of Bosnian pines originated from Montenegro, regarded as Pinus heldreichii var. leucodermis, and from Serbia, regarded as P. heldreichii var. pan?i?i. The amount of nonacosan‐10‐ol varied individually from 27.4 to 73.2% (55.5% in average), but differences between the four investigated populations were not statistically confirmed. The size of the n‐alkanes ranged from C₁₈ to C₃₃. The most abundant n‐alkanes were C₂₃, C₂₇, and C₂₅ (12.2, 11.2, and 10.8% in average, resp.). The carbon preference index (CPI) of the n‐alkanes ranged from 0.8 to 3.1 (1.6 in average), while the average chain length (ACL) ranged from 20.9 to 26.5 (24.4 in average). Long‐chain and mid‐chain n‐alkanes prevailed (49.6 and 37.9% in average, resp.). It was also found that the populations of P. heldreichii var. leucodermis had predominantly a narrower range of n‐alkanes (C₁₈? C₃₁) than the trees of the variety pan?i?i (C₁₈? C₃₃). Differences between the varieties were also significant for most of the other characteristics of the n‐alkane pattern (e.g., most abundant n‐alkanes, CPI, ACL, and relative proportion of short‐, mid‐, and long‐chain n‐alkanes). The principle component and cluster analyses of eleven n‐alkanes confirmed the significant diversity of these two varieties.     

Biosynthesis of secondary alcohols and ketones from alkanes

Combined gas-liquid chromatography-mass spectrometry of the secondary alcohols and ketones from broccoli (Brassica oleracea) showed that the former consisted of a mixture of nonacosan-14-ol (43%) and nonacosan-15-ol (57%) whereas the latter contained predominantly nonacosan-15-one (92%). Chemical degradation of the secondary alcohols derived from [4-¹⁴C]stearic acid in B. oleracea indicated that the intact C₁₈ chain was incorporated into nonacosan-14-ol and nonacosan-15-ol and that the hydroxyl groups of the positional isomers were introduced into a preformed aliphatic chain. [G-³H]Nonacosane was incorporated into nonacosan-14-ol and nonacosan-15-ol in B. oleracea in a ratio similar to that found in the natural mixture. A randomly tritiated natural mixture of secondary alcohols was incorporated into the ketone fraction by broccoli leaves. Chemical degradation of substrate secondary alcohols and the ketones biologically derived from them demonstrated that nonacosan-15-ol was the preferred secondary alcohol for biological oxidation to the ketone. The incorporation of [G-³H]nonacosane into nonacosanol and nonacosanone by broccoli leaves required O₂ and was inhibited by phenanthroline. The inhibition was reversed by Fe²⁺ suggesting that conversion of nonacosane into the oxygenated derivatives involve a mixed-function oxidase. From these results it is concluded that in B. oleracea nonacosane is hydroxylated to give nonacosan-15-ol and nonacosan-14-ol with subsequent preferential oxidation of the C-15 isomer to give the ketones.     

Epicuticular crystals of nonacosan-10-ol: In-vitro reconstitution and factors influencing crystal habits

The primary aerial surfaces of plant species from many families (e.g. Pinaceae, Liliaceae, Ranunculaceae, Papaveraceae) are covered by epicuticular tubules 5–20 μm long and 0.5 μn in diameter. The composition, mechanism of growth and molecular structure of this type of epicuticular aggregates have been studied. Pure nonacosan-10-ol extracted from Picea pungens needle surfaces formed, in vitro, tubular crystals like those occurring in vivo. This crystal habit was obtained irrespective of the type of solvent or substratum, if the solvent was evaporated within minutes. This shows that tubules of nonacosan-10-ol are formed in the kinetic regime of crystallization (limited by the diffusion of molecules from the solution to the crystal surface). Slow evaporation of the solvent or crystallization from the melt resulted in rhombic scales. These planar crystals represent the thermodynamic, stable modification of native nonacosan-10-ol. Homologous impurities in natural nonacosan-10-ol (3–14%) had no effect on the formation of the tubules. However, racemic nonacosan-10-ol invariably crystallized in scales. The phase behaviour of mixtures of natural nonacosan-10-ol and its synthetic racemate as well as synthetic (S)-nonacosan-10-ol provided evidence for the presence of the pure (S)-enantiomer on plant surfaces. The findings are discussed in terms of the mechanisms leading to epicuticular tubules consisting of nonacosan-10-ol and their molecular structure. Crystal structures for the pure enantiomer and the racemate of nonacosan-10-ol are proposed. It is concluded that the principles responsible for the formation of tubules are both the special molecular geometry of the naturally occurring (S)-nonacosan-10-ol and the mobility barrier of the plant cuticle. Further specific biological processes are not necessary for the formation of (S)-nonacosan-10-ol tubules. The alterations of epicuticular structures during ageing or the impact of pollutants are explained as spontaneous transitions between two crystal modifications of (S)-nonacosan-10-ol.     

Variability of n‐Alkanes and Nonacosan‐10‐ol in Natural Populations of Picea omorika

This is the first report of population variability of the contents of n‐alkanes and nonacosan‐10‐ol in the needle epicuticular waxes of Serbian spruce (Picea omorika). The hexane extracts of needle samples originated from three natural populations in Serbia (Vranjak, Zmajeva?ki potok, and Mile?evka Canyon) were investigated by GC and GC/MS analyses. The amount of nonacosan‐10‐ol varied individually from 50.05 to 74.42% (65.74% in average), but the differences between the three investigated populations were not statistically confirmed. The results exhibited variability of the composition of n‐alkanes in the epicuticular waxes with their size ranging from C₁₈ to C₃₅. The most abundant n‐alkanes were C₂₉, C₃₁, and C₂₇ (35.22, 13.77, and 12.28% in average, resp.). The carbon preference index of all the n‐alkanes (CPI_total) of the P. omorika populations (average of populations I–III) ranged from 3.3 to 11.5 (mean of 5.9), while the average chain length (ACL) ranged from 26.6 to 29.2. The principal component and cluster analyses of the contents of nine n‐alkanes showed the greatest difference for the population growing in the Mile?evka Canyon. The obtained results were compared with previous literature data given for other Picea species, and this comparison was briefly discussed.     

Isolation and characterization of microsatellite markers for Thujopsis dolabrata var. hondai (Cupressaceae)1

? Premise of the study: Microsatellite markers were developed for the endemic Japanese species Thujopsis dolabrata var. hondai for studies on forest ecology and tree breeding. ? Methods and Results: We characterized 10 dinucleotide microsatellite loci by screening primers developed using a simple sequence repeat-enriched library. The number of alleles per locus ranged from eight to 44 with an average of 20.3. The observed and expected heterozygosities ranged from 0.326 to 0.854 and from 0.670 to 0.976, respectively. ? Conclusions: The development of these markers can be used to assess useful genetic information for ecological studies and tree breeding in T. dolabrata var. hondai.     

In vitro Reconstitution of Epicuticular Wax Crystals: Formation of Tubular Aggregates by Long-Chain Secondary Alkanediols

Cuticles of several plant species are covered by tubular wax aggregates that are known to consist mainly of (S)-nonacosan-10-ol. The present work addresses the question whether minor wax components may additionally contribute to these tubules. Thin layer chromatography was used to prepare secondary alkanediol fractions from leaf cuticular waxes of Nelumbo nucifera and Thalictrum flavum, containing nonacosane-3,10-diol, nonacosane-4,10-diol, nonacosane-5,10-diol, nonacosane-7,10-diol, nonacosane-9,10-diol and nonacosane-10,13-diol. From organic solutions all these compounds crystallized in tubular shapes. Possible crystal structures of relevant alkanediol isomers are proposed, in analogy to the lattice geometries of comparable aliphatic compounds. The resulting structural model shows that nonacosan-10-ol and various secondary alkanediols may join in metastable mixed crystals. According to the structural model proposed the admixture of alkanediols to nonacosan-10-ol aggregates should enhance the stability of their tubular habit.     

Epicuticular wax of Pinus radiata needles

Epicuticular wax isolated from the cotyledons and primary needles of 10-week-old Pinus radiata seedlings is similar in composition and contains 86% neutral compounds, viz. alkyl esters (25%, C₂₄–C₆₄), nonacosan-10-ol (52%), heptacosane-5,10-diol (2%), nonacosane-4,10-diol, nonacosane-5,10-diol, and nonacosane-10,13-diol (total 12%) and estolides, MW ca 800 (2%), MW ca 1100 (6%), and MW ca 1500 (1%). The acidic fraction (14%) contains n-acids (78%, C₁₂–C₃₂) and diterpene acids (22%, mainly abieta-8,11,13-trien-18-oic, with lesser amounts of pimara-8(14),15-dien-18-oic, isopimara-7,15-dien-18-oic and hydroxylated aromatic, diene and mono-ene acids). Wax isolated from primary needles of 1-yr-old seedlings had a similar neutral fraction composition, but the acidic fraction contained predominantly the diterpene acid mixture, with only trace amounts of n-acids. The wax from 1-yr-old secondary, needles from P. radiata forest trees aged 5 yr and 40 yr contained an acid fraction (12% 5 yr, 17% 40 yr trees) comprising the diterpene acid mixture, with trace amounts of n-acids together with ω-hydroxy acids (C₁₂, C₁₄ and C₁₆). The neutral fraction from both young and old trees had a similar composition containing alkyl esters (7%, C₂₄–C₆₆), estolides (90%, MW 566-ca 1500), nonacosan-10-ol (2%) and the heptacosane and nonacosane diols (1%). During growth and maturation of P. radiata, the nonacosan-10-ol content of the needle wax decreases while the proportion of estolides and diterpene acids increases, the latter probably being located around the stomatal pore.     

FTIR spectroscopy of synthesized racemic nonacosan-10-ol: a model compound for plant epicuticular waxes

As there are no published graphically presented, detailed IR spectra of nonacosan-10-ol (occurring naturally and widely in plant epicuticular waxes of nanotube form), near IR FTIR spectroscopy (fundamentals, overtones and combinations) has been performed on laboratory synthesized racemic nonacosan-10-ol, as a crystalline solid on Mylar and polypropylene substrates. Room temperature, in vacuo data are presented graphically, in full, and show evidence of extensive hydrogen bonding, an orthorhombic perpendicular subcell, a methylene wagging progression, diagnostic of all-trans conformational order, and Fermi resonance. Moderate or stronger anharmonicity is confirmed. Detailed discussion, quantitative in parts, is given of the observed spectral features, especially as to how they inform crystal structure and molecular conformation, and assignments given for some of the features. The results will serve as a reference for future IR studies of the natural epicuticular wax nanotube form of (S)-nonacosan-10-ol.     

Study on Chemical Components in Leaves of Amentotaxus argotaenia (Hance) Pilger Native to China

Eight crystalline substances are isolated from leaves of Amentotaxus argotaenia native to China. Five of them are identified as known A-homo-5-cholest-6-en-3-One, cyclobalanone, nonacosan-10-ol, r-sitosterol and β-sitosterol. The others seem to be new components, whose structures will be studied further.     

Isolation and identification of cuticular compounds from the mediterranean flour moth,Ephestia kuehniella Zeller (Lepidoptera: Pyralidae), their antibacterial activities and biological functions

Cuticular analysis of Ephestia kuehniella females by gas chromatography-mass spectrometry revealed the presence of four groups of chemical compounds including alkane, alcohol, aldehyde and fatty acid. The cuticular n-alkanes ranged from 12 to 18, 20, 23, 24 and 29 carbon atoms in the chain. The most abundant n-alkanes detected in the cuticular extracts were C₁₄ (14.98%) and C₁₈ (8.15%). Cuticular fatty acids included hexadecenoic acid, 9-octadecenoic acid and 9,12-octadecenoic acid. Two types of alcohol including, 2-methyl-Z,Z-3,13-octadecadienol and 9-methyl-Z-10-tetradecen-1-ol acetate, were found in the cuticular lipids of the females. Two aldehyde components, (E)-11-hexadecenal and 9,17-octadecadienal, were identified in the cuticular extract of E. kuehniella. Antibacterial activity of the cuticular compounds was tested against Bacillus subtilis, Bacillus thuringiensis and Escherichia coli. These compounds from the moths inhibited the growth of Gram-positive bacteria. The functional characteristics of the cuticular compounds operating as pheromones, species-associated compounds and host-resistant compounds to bacterial infection are discussed.     

Epicuticular wax crystals of Wollemia nobilis: morphology and chemical composition

BACKGROUND AND AIMS: The morphology of the epicuticular leaf waxes of Wollemia nobilis (Araucariaceae) was studied with special emphasis on the relationship between the microstructure of epicuticular wax crystals and their chemical composition. Wollemia nobilis is a unique coniferous tree of the family Araucariaceae and is of very high scientific value as it is the sole living representative of an ancient genus, which until 1994 was known only from fossils. METHODS: Scanning electron microscopy (SEM), gas chromatography (GC) combined with mass spectrometry (GC-MS) and nuclear magnetic resonance spectroscopy (NMR) were used for characterizing the morphology and the chemical structure of the epicuticular wax layer of W. nobilis needles. KEY RESULTS: The main component of the leaf epicuticular wax of W. nobilis is nonacosan-10-ol. This secondary alcohol together with nonacosane diols is responsible for the tubular habit of the epicuticular wax crystals. Scanning electron micrographs revealed differences in the fine structure of adaxial and abaxial leaf surfaces that could be explained by gas chromatographic studies after selective mechanical removal of the waxes. CONCLUSIONS: SEM investigations established the tubular crystalline microstructure of the epicuticular wax of W. nobilis leaves. GC-MS and NMR experiments showed that nonacosan-10-ol is the major constituent of the epicuticular wax of W. nobilis leaves.     

Nanotubules on plant surfaces: chemical composition of epicuticular wax crystals on needles of Taxus baccata L

Needles of Taxus baccata L. were covered with tubular epicuticular wax crystals varying in diameters (100 and 250 nm) and lengths (300-500 and 500-1000 nm) on the abaxial and adaxial surfaces, respectively. Various sampling protocols were employed to study the chemical composition of the needle waxes on three different levels of spatial resolution. First, a dipping extraction of whole needles yielded the total cuticular wax mixture consisting of very long chain fatty acids (21%), alkanediols (19%), phenyl esters (15%), and secondary alcohols (9%) together with small amounts of aldehydes, primary alcohols, alkanes, alkyl esters, and tocopherols. Second, waxes from both sides of the needle were sampled separately by brushing with CHCl3-soaked fabric glass. Both sides showed very similar qualitative composition, but differed drastically in quantitative aspects, with nonacosan-10-ol (18%) and alkanediols (33%) dominating the abaxial and adaxial waxes, respectively. Third, the epi- and intracuticular wax layers were selectively sampled by a combination of mechanical wax removal and brushing extraction. This provided direct evidence that the tubular wax crystals contained high percentages of nonacosane-4,10-diol and nonacosane-5,10-diol on the abaxial surface, and nonacosan-10-ol on the adaxial surface of the needles. Together with these compounds, relatively large amounts of fatty acids and smaller percentages of aldehydes, primary alcohols, alkyl esters, and alkanes co-crystallized in the epicuticular layer. In comparison, the intracuticular wax consisted of higher portions of cyclic constituents and aliphatics with relatively high polarity. The formation of the tubular crystals is discussed as a spontaneous physico-chemical process, involving the establishment of gradients between the epi- and intracuticular wax layers and local phase separation.     

Epicuticular wax of Cirsium arvense

Epicuticular wax of Cirsium arvense contains hydrocarbons (12%), esters (35%), free acids (3%), free alcohols (10%), triterpene acetates (8%) and 1,3-ditetradecanoyl-2-hexanoylglycerol (8%) as major components. Minor components are triterpene alcohols (3%) and nonacosan-10-ol (2%). The esters contain triterpene alcohol esters (19%) as well as esters of alkanols.     

Molecular Paleoclimate Reconstructions over the Last 9 ka from a Peat Sequence in South China

To achieve a better understanding of Holocene climate change in the monsoon regions of China, we investigated the molecular distributions and carbon and hydrogen isotope compositions (δ¹³C and δD values) of long-chain n-alkanes in a peat core from the Shiwangutian (SWGT) peatland, south China over the last 9 ka. By comparisons with other climate records, we found that the δ¹³C values of the long-chain n-alkanes can be a proxy for humidity, while the δD values of the long-chain n-alkanes primarily recorded the moisture source δD signal during 9–1.8 ka BP and responded to the dry climate during 1.8–0.3 ka BP. Together with the average chain length (ACL) and the carbon preference index (CPI) data, the climate evolution over last 9 ka in the SWGT peatland can be divided into three stages. During the first stage (9–5 ka BP), the δ¹³C values were depleted and CPI and P_aq values were low, while ACL values were high. They reveal a period of warm and wet climate, which is regarded as the Holocene optimum. The second stage (5–1.8 ka BP) witnessed a shift to relatively cool and dry climate, as indicated by the more positive δ¹³C values and lower ACL values. During the third stage (1.8–0.3 ka BP), the δ¹³C, δD, CPI and P_aq values showed marked increase and ACL values varied greatly, implying an abrupt change to cold and dry conditions. This climate pattern corresponds to the broad decline in Asian monsoon intensity through the latter part of the Holocene. Our results do not support a later Holocene optimum in south China as suggested by previous studies.     

Population Variability of Nonacosan‐10‐ol and n‐Alkanes in Needle Cuticular Waxes of Macedonian Pine (Pinus peuce Griseb.)

This is the first report on population variability of nonacosan‐10‐ol and n‐alkanes in needle epicuticular waxes of Macedonian pine (Pinus peuce Griseb .) Hexane extracts of needle samples, originating from two natural populations in Montenegro (Zeletin and Sjekirica) and from one population in Serbia (Mokra Gora) were analyzed by gas chromatography (GC) and gas chromatography/mass spectrometry (GC/MS). The amount of nonacosan‐10‐ol varied individually from 41.3 to 72.31% (average 55.9%), with the Sjekirica population being statistically divergent (64.4% on average). The results showed n‐alkanes in epicuticular waxes ranging from C₁₈ to C₃₃. The most abundant alkanes were C₂₉, C₂₅, C₂₇, and C₂₃ (15.5, 11.1, 10.6, and 10.5% on average, resp.). The carbon preference index of Pinus peuce ranged from 1.0 to 4.3 (1.9 on average). Average chain length ranged from 18.4 to 27.7 (average 25.7). A high level of inidividual quantitative variation in all of these hydrocarbon parameters was also detected. These results were compared with published data on other species from the Pinus genus.     

Studies on the structure of the plant wax nonacosan-10-ol, the main component of epicuticular wax conifers

The main component presents in the epicuticular waxes of needles of Pinus halepensis and the most of conifers, the secondary alcohol nonacosan-10-ol, has been investigated by X-ray diffraction and differential scanning calorimetry. The results obtained from these physical techniques permitted to establish a definitive structural model of the molecular arrangement of this wax, basically in good agreement with the model formulated by other authors from theoretical formulations. Biological implications of the proposed structure have been also formulated.     

Thermophilic and thermotolerant fungi in the desert soils of Saudi Arabia

Forty-eight thermophilic and thermotolerant species in addition to 5 varieties which belong to 24 genera were collected from desert soils in Saudi Arabia on glucose-(22 genera and 38 species + 5 varieties), cellulose-(15 genera and 27 species + 4 varieties) and 40% sucrose-Czapek's agar plates (13 genera and 26 species + 4 varieties) at 45 °C. The most frequent species were as follows: Aspergillus fumigatus, A. terreus, Humicola grisea var. thermoidae and Chaetomium thermophile var. copropile on glucose-; A. fumigatus, C. thermophile var. copropile, A. terreus, A. nidulans and C. thermophile var. dissitum on cellulose-; and A. fumigatus and A. terreus on 40% sucrose-Czapek's agar plates. Sixteen species and 4 varieties were particularly thermophilic and these were A. fumigatus, H. grisea var. thermoidae, H. insolens, H. lanuginosa, C. thermophile var. copropile, C. thermophile var. dissitum, C. virginicum, M. pusillus, S. thermophila, S.? pulverulentum, T. thermophilus, T.? emersoni, T. aurantiacus, T. thermophila, M. pulchella var. sulfurea, M. albomyces, ?A. terrestris, C. pruinosum, T. thermophila and P. thermophila. The remaining species showed different degrees of thermotolerant (32 species + 1 variety).     

Composition of the cuticle of developing sweet cherry fruit

The composition of wax and cutin from developing sweet cherry (Prunus avium) fruit was studied by GC-MS between 22 and 85 days after full bloom (DAFB). In this and our previous study, fruit mass and surface area increased in a sigmoidal pattern with time, but mass of the cuticular membrane (CM) per unit fruit surface area decreased. On a whole fruit basis, mass of CM increased up to 36 DAFB and remained constant thereafter. At maturity, triterpenes, alkanes and alcohols accounted for 75.6%, 19.1% and 1.2% of total wax, respectively. The most abundant constituents were the triterpenes ursolic (60.0%) and oleanolic acid (7.5%), the alkanes nonacosane (13.0%) and heptacosane (3.0%), and the secondary alcohol nonacosan-10-ol (1.1%). In developing fruit triterpenes per unit area decreased, but alkanes and alcohols remained essentially constant. The cutin fraction of mature fruit consisted of mostly C16 (69.5%) and, to a lower extent, C18 monomers (19.4%) comprising alkanoic, omega-hydroxyacids, alpha,omega-dicarboxylic and midchain hydroxylated acids. The most abundant constituents were 9(10),16-dihydroxy-hexadecanoic acid (53.6%) and 9,10,18-trihydroxy-octadecanoic acid (7.8%). Amounts of C16 and C18 monomers per unit area decreased in developing fruit, but remained approximately constant on a whole fruit basis. Within both classes of monomers, opposing changes occurred. Amounts of hexadecandioic, 16-hydroxy-hexadecanoic, 9(10)-hydroxy-hexadecane-1,16-dioic and 9,10-epoxy-octadecane-1,18-dioic acids increased, but 9,10,18-trihydroxy-octadecanoic and 9,10,18-trihydroxy-octadecenoic acids decreased. There were no qualitative and minor quantitative differences in wax and cutin composition between cultivars at maturity. Our data indicate that deposition of some constituents of wax and cutin ceased during early fruit development.     

Desmids of Iraq

Forty species and varieties of desmids belonging to the genera Closterium (7), Pleurotaenium (1), Euastrum (3), Cosmarium (28) and Staurastrum (1) have been described from southern Iraq including two new varieties under Cosmarium (i.e. C. cyclicum Lund, var. mesopotamianum var. nov., and C. tyrolicum (Nordst.) Krieger & Gerloff var. minor var. nov.). Most of the taxa are new records for Iraq.