Role of the furrow of the proximal colon in the production of soft and hard feces in nutrias, Myocastor coypus

The bacterial level of soft feces is higher than that of hard feces in nutrias. This suggests the heterogeneity of bacterial density in the large intestine. To show the heterogeneity of bacteria in the contents of the large intestine in nutrias, we divided the contents of the large intestine into 12 regions, then measured the nitrogen (N), total amino acids (TAA) and diaminopimelic acid (DAP), a bacterial marker, of these regions. Levels of N, TAA and DAP varied along the cross section of the proximal colon. The greater curvature of the main lumen and furrow had higher N, TAA and DAP concentrations than the lesser curvature. We also examined the involvement of the furrow in producing two types of feces differing in bacterial nitrogen content by surgically preventing the flow of the furrow contents. We compared the concentrations of N, TAA and DAP between soft and hard feces among operated, sham-operated and intact animals. Surgical closure of the furrow abolished the difference in levels of N, TAA and DAP between soft and hard feces, suggesting that the furrow of the proximal colon is responsible for making the bacterial density higher in soft feces than in hard feces. Accepted: 13 July 2000     

Faculative Anaerobic Bacteria in the Digestive Tract of Chum Salmon (Oncorhynchus keta) Maintained in Fresh Water Under Defined Culture Conditions

The bacterial flora in the digestive tract of chum salmon growing in fresh water under defined and controlled culture conditions was examined both qualitatively and quantitatively. The predominant species present in the digestive tract were identified as Aeromonas, with Aeromonas hydrophila being the most common isolate. These aeromonads were not isolated from the diet. Other bacterial species commonly isolated included Bacillus, Enterobacter, nonpigmented pseudomonads, Micrococcus, and Acinetobacter. These species were also isolated from the diet or tank water. As many as 10-8 viable bacteria per g (wet weight) of digestive tract plus contents were counted. After 75 days of starvation, 10-6 viable bacteria were counted, whereas fish fed a sterile feed contained 10-5 viable bacteria per g (wet weight) of digestive tract plus contents.     

Cytokinesis and cancer:Polo loves ROCK'n' Rho(A)

Cytokinesis is the last step of the M (mitosis) phase, yet it is crucial for the faithful division of one cell into two. Cytokinesis failure is often associated with cancer. Cytokinesis can be morphologically divided into four steps: cleavage furrow initiation, cleavage furrow ingression, midbody formation and abscission. Molecular studies have revealed that RhoA as well as its regulators and effectors are important players to ensure a successful cytokinesis. At the same time, Polo-like kinase 1 (Plk1) is a...     

Three species of Pagodia (Corynexochida,Trilobita) from the Furongian (Cambrian) of northern Anhui,China and their intraspecific variation

More than one thousand cranidia, librigenae, and pygidia of the trilobite Pagodia were collected from the Cambrian (upper Jiangshanian through Stage 10) at Fenghuangshan in northern Anhui, China. They were identified as Pagodia lotos Walcott, 1905, Pagodia depressa (Walcott, 1905), and Pagodia bia Walcott, 1905. Based on one rare nearly complete exoskeleton of P. depressa and comparisons among the three species of Pagodia, the redefinition for those species is attempted as follows. Pagodia lotos: Glabella rectangular, slightly convergent anteriorly; anterior border ridge-like, anterior border furrow deep; pygidium semicircular, axis tapered rearward, with 4 axial rings and a terminal piece. P. depressa: Cranidium subquadrate, highly convex; glabella cylindrical, convergent anteriorly; pygidium semicircular. P. bia: Glabella rectangular, constricted in the midlength; fixigena wide (tr.); anterior border very narrow (sag.) and ridge-like; pygidium semicircular with wide borders; pygidial axis ended closer to the pygidial border furrow. We also discuss their intraspecific variations, commonly seen on the exfoliated specimens: palpebral ridge evident or obliterated, the length (sag.) of anterior area variable, the decoration of exoskeleton surface (with granules variable in size, convex or pitted).     

A new earthworm species of the genus Drawida Michaelsen(Oligochaeta: Moniligastridae) from China

A new species of terrestrial earthworms is described as Drawida dandongensis sp. nov. from Dandong, Liaoning, China. It is distinguished from others by a pair of spermathecal pores lie in the ventral of 7/8 intersegmental furrow, and a pair of male pores lie in 10/11 intersegmental furrow, between setae b and c.     

Comparison of microbial consortia in refuse-derived fuel (RDF) preparations between Japan and Germany

Refuse-derived fuels (RDF) pellets manufactured in Japan have been reported to contain a relatively high number of viable bacterial cells, and these bacteria generated a large amount of hydrogen gas during fermentation under wet conditions. In this study, we compared hydrogen gas generation from RDF pellets manufactured in Japan and in Germany and found that a large amount of hydrogen gas was generated from the Japanese RDF pellets but not from the German ones. This difference can be explained by the absence and presence of a biodegradation process before molding of raw garbage into RDF pellets. That is, the German process includes a biodegradation (or biological drying) process with forced aeration for a week, and this appears to reduce BOD in the garbage. Denaturing gradient gel electrophoresis analysis of 16S rRNA gene followed by DNA sequencing indicated that microbiotas of the RDF pellets manufactured in Japan and in Germany were very different.     

Bacteria and Methanogens Differ along the Gastrointestinal Tract of Chinese Roe Deer (Capreolus pygargus)

The current study provides the insight into the bacteria in the gastrointestinal tract (GIT) and methanogens presented in the rumen and cecum of the Chinese roe deer (Capreolus pygargus). The ruminal, ileal, cecal, and colonic contents, as well as feces, were obtained from each of the three, free-range, roe deer ingesting natural pasture after euthanasia. For the bacterial community, a total of 697,031 high-quality 16S rRNA gene sequences were generated using high-throughput sequencing, and assigned to 2,223 core operational taxonomic units (OTUs) (12 bacterial phyla and 87 genera). The phyla Firmicutes (51.2%) and Bacteroidetes (39.4%) were the dominant bacteria in the GIT of roe deer. However, the bacterial community in the rumen was significantly (P<0.01) different from the other sampled regions along the GIT. Secondly, Prevotella spp., Anaerovibrio spp., and unidentified bacteria within the families Veillonellaceae and Paraprevotellaceae were more abundant in the rumen than in the other regions. Unidentified bacteria within the family Enterobacteriaceae, Succinivibrio spp., and Desulfovibrio spp. were more predominant in the colon than in other regions. Unidentified bacteria within the family Ruminococcaceae, and Bacteroides spp. were more prevalent in the ileum, cecum and fecal pellets. For methanogens in the rumen and cecum, a total of 375,647 high quality 16S rRNA gene sequences were obtained and assigned to 113 core OTUs. Methanobrevibacter millerae was the dominant species accounting for 77.3±7.4 (S.E) % and 68.9±4.4 (S.E) % of total sequences in the rumen and cecum of roe deer, respectively. However, the abundance of Methanobrevibacter smithii was higher in the rumen than in the cecum (P = 0.004). These results revealed that there was intra variation in the bacterial community composition across the GIT of roe deer, and also showed that the methanogen community in the rumen differed from that in the cecum.     

Comparison of Microbial Consortia in Refuse-Derived Fuel (RDF) Preparations between Japan and Germany

Refuse-derived fuels (RDF) pellets manufactured in Japan have been reported to contain a relatively high number of viable bacterial cells, and these bacteria generated a large amount of hydrogen gas during fermentation under wet conditions. In this study, we compared hydrogen gas generation from RDF pellets manufactured in Japan and in Germany and found that a large amount of hydrogen gas was generated from the Japanese RDF pellets but not from the German ones. This difference can be explained by the absence and presence of a biodegradation process before molding of raw garbage into RDF pellets. That is, the German process includes a biodegradation (or biological drying) process with forced aeration for a week, and this appears to reduce BOD in the garbage. Denaturing gradient gel electrophoresis analysis of 16S rRNA gene followed by DNA sequencing indicated that microbiotas of the RDF pellets manufactured in Japan and in Germany were very different.     

Predation by Tawny owls (Strix aluco) on Bank voles (Clethrionomys glareolus) and Wood mice (Apodemus sylvaticus)

During 1954–56 we made a study of the numerical relationships between a population of Tawny owls ( Strix aluco ) and populations of their main prey species, the Bank vole ( Clethrionomys glareolus ) and the Wood mouse ( Apodemus sylvaticus ), in a 48.6-ha area of mainly deciduous woodland near Oxford. The owls were censused by plotting their territorial challenges (hooting), the rodents by the capture-mark-recapture technique. Since the rodents were marked with numbered monel metal leg rings, we were able to recover a proportion of these in the pellets of undigested material cast by the owls.
The results for Bank voles, which were the more numerous of the two prey species, indicated that 20–30% of the standing crop was removed by owls in any two-month period. We also made an independent estimate of predation rate from the number of rings recovered from owl pellets in relation to the number of ringed rodents released into the population each two months. This coincided with the limits indicated by the first method for voles (20-30% removed of the standing crop each 2 months).
Wood mice were scarcer than Bank voles and were not amenable to satisfactory capturemark-recapture analysis but, when treated on the system of recovery of rings in owl pellets, we found that they were preyed upon relatively more heavily than were the voles. Of the latter 18–46% of the marked animals were recovered in the owl pellets compared with 28–70% of the marked mice. Either the mice were preferred prey or they were more vulnerable to owl predation by reason of their preference for more open habitats.     

Parasites in micromammal fecal pellets throughout the Late Holocene (“Cueva Peligro” paleontological site,Patagonia, Argentina)

Parasite remains in micromammal fecal pellets collected from the paleontological site “Cueva Peligro” (CP 43°40′18”S, 66°24′52”W), Chubut Province, Argentina, were examined. The samples were obtained from two grids, dated between 1220 ± 70¹⁴C yr B.P. to modern dates. Fecal pellets were whole processed, rehydrated, homogenized, and examined via light microscopy. Eggs of parasites found were measured and photographed. Fecal pellets belong to one or more insectivore to omnivore unidentified micromammal species, possibly sigmodontine rodents. A high number of helminthes species was recorded (11 species), eight nematodes, two anoplocephalid cestodes and one acanthocephalan species. The sigmodontine-parasite relationship varied throughout the studied period and between studied grids. This is the first time that Gongylonema sp. and Syphacia sp. are reported from ancient times from Patagonia. The obtained results contribute to the knowledge of parasite assemblages associated to native South American sigmodontine rodents and the zoonoses present in the area throughout the lasts 1200 years.     

A note: gut bacteria produce components of a locust cohesion pheromone

AIMS: Faecal pellets from germ-free locusts were used as culture media to determine the ability of locust gut bacteria to synthesize phenolic components of the locust cohesion pheromone. METHODS AND RESULTS: Inoculation of germ-free faecal pellets with Pantoea agglomerans, a species commonly isolated from locusts, resulted in the release of large amounts of guaiacol and small amounts of phenol, both of which are components of the locust cohesion pheromone. Two other locust-derived species, Klebsiella pneumoniae pneumoniae and Enterobacter cloacae, also produced guaiacol from germ-free faecal pellets, but the opportunistic locust pathogen, Serratia marcescens, did not. The most likely precursor for guaiacol is the plant-derived vanillic acid, which is present in large amounts in the faeces of both conventional and germ-free locusts. CONCLUSIONS: These observations are consistent with previous ones, that locust gut bacteria are responsible for the production of components of the locust cohesion pheromone. SIGNIFICANCE AND IMPACT OF THE STUDY: These findings illustrate how an insect can adapt to make use of a common bacterial metabolite produced by one or more of its indigenous gut bacterial species. This observation has implications for our appreciation of insect gut microbiota interactions.     

The first cleavage furrow demarcates the dorsal-ventral axis in Xenopus embryos

To determine the relationship between the first cleavage furrow and the dorsal-ventral axis of the Xenopus embryo, a heritable intracellular marker was injected into one blastomere at the two-cell stage. Embryos were selected in which the cleavage furrow bisected the crescent-shaped region of pale pigmentation or in which it formed 45-90 degrees from this region. This region, which is located in the animal hemisphere of the Xenopus embryo, meets the criteria of the grey crescent as defined in other amphibian species. At tailbud stages the interface between the labeled and unlabeled halves was always coincident with the midsagittal plane. This correlation shows that the first cleavage furrow demarcates the dorsal-ventral axis. The labeling pattern was the same whether the first cleavage furrow bisected the region of pale pigmentation or whether it formed 90 degrees from it. However, when this region was bisected (70% of embryos) it always was located on the dorsal side of the embryo. Thus the region of pale pigmentation indicates the dorsal side of the embryo only when it is bisected by the first cleavage furrow.     

Oviposition of the dung beetle Aphodius ater in relation to the abundance of yellow dungfly larvae (Scatophaga stercoraria)

1. The dung beetle Aphodius ater and the yellow dungfly Scatophaga stercoraria are temporally co-occurring species in sheep dung, which they use for reproduction and nutrition ( A. ater ) or for reproduction only ( S. stercoraria ) during the spring in northern Germany. Scatophaga stercoraria uses fresh sheep dung pellets a few hours old for oviposition, whereas A. ater lays eggs into 2–10-day-old pellets. In the present study, the egg laying behaviour of A. ater in sheep dung in relation to the presence of larvae of S. stercoraria was investigated experimentally.
2. Choice experiments, based on examining the egg laying behaviour of beetles in 2- and 4-day-old pellets with and without high and low densities of fly larvae, showed the following. In 2-day-old pellets, the beetles did not distinguish between pellets without fly larvae or with fly larvae at low larval density but avoided laying eggs into pellets with a high larval density. In 4-day-old pellets, the beetles always preferred to lay their eggs into pellets without fly larvae, regardless of larval density.
3. The influence of different densities of larvae of S. stercoraria on dung depletion was examined by measuring the dry weight, organic matter content and organic nitrogen content of the remaining dung after larval development. The presence of the larvae led to a reduction in all three parameters.
4. The beetles' behaviour of laying eggs into older pellets, and their awareness of the presence of high densities of fly larvae, enables them to avoid egg laying into pellets that will have been depleted by fly larvae before the beetle larvae have finished their development.     

Food vacuole contents in the ciliate, Balantidium jocularum (Balantididae), a symbiont in the intestine of the surgeonfish, Naso tonganus (Acanthuridae)

During the past 16 years, the ciliate Balantidium jocularum has been collected from the intestines of many specimens of its fish host, Naso tonganus, all collected from the Great Barrier Reef near Lizard Island, Australia. Ciliates for this study of food consumption were isolated in 1988, 1989, 2003, and 2005. Nineteen specimens of B. jocularum were examined in the transmission electron microscope to determine the contents of both food vacuoles and a putative discharging cytoproct vacuole. Food vacuoles contained rod-shaped bacteria, tightly coiled spirilliform bacteria, and one or more euglenid flagellates. In several balantidia of somewhat different form than the type species of B. jocularum, the large bacterium, Epulopiscium fishelsoni, was observed in light microscope protargol preparations. Some putative phagolysosomes retained spirilliform bacteria that were apparently intact, and others contained partially digested flagellates. Food in a single discharging cytoproct vacuole consisted of normal appearing spirilliform bacteria, some other bacteria, and no flagellates. The results argue for non-selective ingestion of food and selective digestion; hence, somewhat inefficient food processing.     

Symbiotic Bacteria on the Epidermis of Species of the Nemertodermatida (Platyhelminthes,Acoelomorpha)

Meara stichopi and an undescribed species of Meara, both endosymbiotic in the intestine of aspidochirote holothurians, possess filiform extraepidermal bacteria among the epidermal cilia. Similar bacteria were also observed on one specimen of the free-living species Nemertoderma westbladi. The bacteria are of the gram-negative type, as evident by cell wall structure and results from gramstaining. On a few specimens of M. stichopi, the bacteria were found to carry peculiar distal appendages, or buds, on stalked cup-shaped cell extensions. As the bacteria described here appear to be species specific, they can be used in addition to other features in the often problematic characterization of the nemertodermatid species.     

Pollination of the orchidEpipactis thunbergii by syrphid flies (Diptera: Syrphidae)

The behavior of visitors to the flowers of the orchidEpipactis thunbergii was studied, with special attention to the role of the epichile in the pollination process. Only four species of syrphid flies legitimately pollinated the flower, among whichSphaerophoria macrogaster was regarded as the most effective pollinator. The movable epichile, possessing a furrow at its base, played a critical role in the pollination process: it threw the syrphid fly onto the stigmatic surface when both sides of the basal slanting surface of the furrow were presumably pressed in the direction of the hypochile by the fore (and middle) legs of the retreating syrphid fly. At this moment, the fly received a set of pollinia on the thorax.     

Antimicrobial activity in gorgonian corals (Coelenterata,Octocorallia)

Coral surfaces are often colonized by bacteria and other microbes that may be pathogenic as well as surface-fouling. To test the hypothesis that corals possess antimicrobial properties, both polar and non-polar extracts from eight species of gorgonian corals were assayed against five species of bacteria. Antimicrobial activity was most apparent in the non-polar fractions, which inhibited bacterial growth in all but one of the 40 interactions assayed (8 coralsx5 bacteria). Polar extracts were effective in less than 40% (14/40) of the interactions assayed. The levels of antimicrobial activity varied significantly among the gorgonian corals and was also dependent on the species of bacteria. Generally, marine bacteria were less sensitive to the extracts than were non-marine species. Differences in selerite content among the gorgonians did not influence the levels of extract antimicrobial activity.     

伞形科柴胡属部分物种的果实特征及系统学意义

对21个代表种果实形态与解剖特征观察发现：（1）中国柴胡属（Bupleurum L.）果实以芹亚科（Apioideae）原始的两侧压扁型为主,在外形上可分为圆柱形、矩圆形和卵形3类;（2）在柴胡属中果皮细胞内没有发现广泛存在于芹亚科基部类群变豆菜亚科（Saniculoideae）和天胡荽亚科（Hydrocotyloideae）的晶体后含物;（3）从果实的横切面看,可将柴胡属划分为棱槽单油管型和棱槽多油管型两大类。结合前人对伞形科其它类群果实形态解剖特征的研究及近年来分子系统学的证据,认为：（1）中国柴胡属植物的多油管类型为本属较进化类群;（2）柴胡属可能是芹亚科中连接基部类群与其它类群的过渡环节或进化旁支;（3）果实形态与解剖特征可作为探讨国产柴胡属种内和种间关系的辅助性状,并给出了分种检索表。     

Three dimensional typological studies using scanning electron microscopy for characterization of Termitomyces pellets obtained from submerged growth conditions

There are gaps in existing understanding of fungal pellet growth dynamics. We used scanning electron microscopy (SEM) for morphological characterization of the biomass organization of Termitomyces pellets for seven species: T. microcarpus (TMI1), T. albuminosus (TAL1, TAL2), T. striatus (TSTR), T. aurantiacus (TAUR), T. heimii (THE1, THE2), T. globulus (TGLO) and T. clypeatus (TCL1, TCL2, TCL3, TCL4, TCL5). We assessed the utility of SEM for morphological and structural characterization of Termitomyces spp. in three dimensional (3D) pellet form to identify ideal pellet morphology for industrial use. Typological classification of Termitomyces species was based on furrows, isotropy, total motifs and fractal dimensions. The pellets formed were entangled and exhibited highly compacted mycelial mass with microheterogeneity and microporosity. The mean density of furrows of Termitomyces species was between 10,000 and 11,300 cm/cm², percentage isotropy was 30?80 and total motifs varied from 300 to 2500. TGLO exhibited the highest furrow mean density, 11243 cm/cm², which indicated a compact, cerebroid structure with complex ridges and furrows, whereas TAL2 exhibited the lowest furrow density. TMI1a exhibited a high percentage isotropic value, 74.6, TSTR exhibited the lowest, 30.9. Total motif number also was used as a typological classification parameter. Fractal values were 2.64?2.78 for various submerged conditions of Termitomyces species. TAL1 exhibited the highest fractal dimension and TAL2 the lowest, which indicates the complexity of branching patterns. Three-dimensional SEM image analysis can provide insight into pellet micromorphology and is a powerful tool for exploring topographical details of pellets.