Multilocus phylogenetic analysis of the genus Atherina (Pisces: Atherinidae)

Sand-smelts are small fishes inhabiting inshore, brackish and freshwater environments and with a distribution in the eastern Atlantic and Mediterranean Sea, extending south into the Indian Ocean. Here, we present a broad phylogenetic analysis of the genus Atherina using three mitochondrial (control region, 12S and 16S) and two nuclear markers (rhodopsin and 2nd intron of S7). Phylogenetic analyses fully support the monophyly of the genus. Two anti-tropical clades were identified, separating the South African Atherina breviceps from the north-eastern Atlantic and Mediterranean Atherina' species. In European waters, two groups were found. The first clade formed by a well supported species-pair: Atherina presbyter (eastern Atlantic) and Atherina hepsetus (Mediterranean), both living in marine waters; a second clade included Atherina boyeri (brackish and freshwater environments) and two independent lineages of marine punctated and non-punctated fishes, recently proposed as separate species. Sequence divergence values strongly suggest multiple species within the A. boyeri complex.     

Ceratioid anglerfish of the families Gigantactinidae and Linophrynidae (Lophiiformes, Ceratioidea) collected off Madeira, including two species new to the north-eastern Atlantic

Specimens of the rare deep-sea anglerfish Gigantactis ios , Linophryne brevibarbata , L. aff. coronata and L. racemifera , caught in the north-eastern Atlantic, off Madeira, are reported and compared with previously described specimens, G. ios and L. racemifera are recorded for the first time from the north-eastern Atlantic.     

Geographic expansion of the invasive mud sleeper Butis koilomatodon (Perciformes: Eleotridae) in the western Atlantic Ocean

The Indo-Pacific mud sleeper Butis koilomatodon (Eleotridae) is recorded for the first time in the south-western Atlantic Ocean, based on 23 specimens caught at seven localities along the northern, north-eastern, eastern and south-eastern Brazilian coast. The occurrence of males and females in different ontogenetic stages indicates that this exotic mud sleeper breeds there. This invasive species has the potential to compete for food and microhabitat with several native gobies and an endemic blenny that dwell in estuaries and mangroves, besides preying on native fishes and crustaceans.     

Annotated list of demersal fishes occurring at Sedlo Seamount, Azores north-east central Atlantic Ocean

Several fish surveys were carried out in recent years at Sedlo Seamount, Azores, north-eastern central Atlantic Ocean. An objective of the surveys was to determine the species composition of the demersal fish species living in the area. Four types of sampling gears (bottom trawl and three types of longline) were used at Sedlo Seamount resulting in very different species composition by gear and a very complete coverage of the fish fauna of the area. A list of fishes caught with these sampling methods is presented, along with other specific auxiliary information. Altogether 78 species from 43 families were listed for Sedlo Seamount, and as far as is known, 15 species were recorded for the first time for Azorean waters.     

Adaptive and Neutral Genetic Variation and Colonization History of Atlantic Salmon, Salmo salar

Synopsis I combined neutral microsatellite markers with the major histocompatibility complex (MHC) class IIB to study genetic differentiation and colonization history in Atlantic salmon, Salmo salar, in the Baltic Sea and in the north-eastern Atlantic. Baltic salmon populations have lower levels of microsatellite genetic variation, in terms of heterozygosity and allelic richness than Atlantic populations, confirming earlier findings with other genetic markers, suggesting that the Baltic Sea populations have been exposed to genetic bottlenecks, most likely at a founding event. On the other hand, the level of MHC variation was similar in the Baltic and in the north-eastern Atlantic, indicating that positive balancing selection has increased the level of MHC-variation. Both microsatellite and MHC class IIB genetic variation give strong support to the hypothesis that the Baltic salmon are of a biphyletic origin, the southern population in this study is strongly differentiated from both the northern Baltic salmon populations and from the north-eastern Atlantic populations. Salmon may have colonized the northern Baltic Sea either from the south, via the so called “N?rke strait” or from the north, via a proposed historical connection between the White Sea and the northern Baltic. At microsatellites, no significant isolation-by distance was found at either colonization route. At the MHC, populations were significantly isolated by distance when assuming that colonization occurred via the “N?rke strait”.     

Evidence of Atlantic bluefin tuna spawning in the Bay of Biscay,north-eastern Atlantic

The spawning grounds of the Atlantic bluefin tuna (Thunnus thynnus) are traditionally considered to be the Gulf of Mexico (Gulf of Mexico) and the Mediterranean Sea (Mediterranean Sea). However, for the western Atlantic, unequivocal evidence of bluefin spawning outside the Gulf of Mexico has been shown. In this study we present the first records of genetically confirmed bluefin larvae in the southern Bay of Biscay (eastern Atlantic). These findings provide evidence of bluefin spawning activity outside the Mediterranean Sea, in the north-eastern Atlantic. However, our results suggest that the bluefin spawning in the Bay of Biscay is a sporadic phenomenon.     

Using DNA barcoding to assess Caribbean reef fish biodiversity: expanding taxonomic and geographic coverage

This paper represents a DNA barcode data release for 3,400 specimens representing 521 species of fishes from 6 areas across the Caribbean and western central Atlantic regions (FAO Region 31). Merged with our prior published data, the combined efforts result in 3,964 specimens representing 572 species of marine fishes and constitute one of the most comprehensive DNA barcoding "coverages" for a region reported to date. The barcode data are providing new insights into Caribbean shorefish diversity, allowing for more and more accurate DNA-based identifications of larvae, juveniles, and unknown specimens. Examples are given correcting previous work that was erroneous due to database incompleteness.     

Community structure and diet of roving herbivorous reef fishes in the Abrolhos Archipelago, south-western Atlantic

Community structure and diet of roving herbivorous reef fishes were analysed in 13 study sites around the five islands of the Abrolhos Archipelago, north-eastern Brazil (17°58' S; 38°42' W). This area has been part of the Abrolhos Marine National Park since 1983. Abundances and diets of fishes within the families Scaridae, Acanthuridae and Kyphosidae were compared among groups of sites differing in benthic community structure and exposure regime. The abundance of roving herbivorous fishes was higher in shallower sites than in deeper sites. At all study sites, observations of total herbivorous reef fish community structure revealed that 64% of fishes were acanthurids, 33% were scarids and only 4% were kyphosids. This pattern was predominant in all study sites. The majority of fishes examined in this study had the bulk of their diet based on both algae (35–90%) and detritus (35–65%). Among groups of algae, filamentous algae were the most commonly consumed as the majority of roving herbivorous fishes in Abrolhos feed as scrapers and excavators. The exceptions were the kyphosids, which had a diet consisting primarily of macroalgae (mainly Phaeophyta), and Acanthurus coeruleus that consumed mainly turf algae and very little detritus. The data collected indicate that roving herbivorous fishes in the Abrolhos Archipelago are more abundant at calm sites where detritus and delicate algae, their major food resources, are more abundant. The results presented here, along with underwater observations, suggest that the abundance and diet of these three fish families are associated with substratum cover.     

Measuring marine fishes biodiversity: temporal changes in abundance, life history and demography

Patterns in marine fishes biodiversity can be assessed by quantifying temporal variation in rate of population change, abundance, life history and demography concomitant with long-term reductions in abundance. Based on data for 178 populations (62 species) from four north-temperate oceanic regions (Northeast Atlantic and Pacific, Northwest Atlantic, North mid-Atlantic), 81% of the populations in decline prior to 1992 experienced reductions in their rate of loss thereafter; species whose rate of population decline accelerated after 1992 were predominantly top predators such as Atlantic cod (Gadus morhua), sole (Solea solea) and pelagic sharks. Combining population data across regions and species, marine fishes have declined 35% since 1978 and are currently less than 70% of recorded maxima; demersal species are generally at historic lows, pelagic species are generally stable or increasing in abundance. Declines by demersal species have been associated with substantive increases in pelagic species, a pattern consistent with the hypothesis that increases in the latter may be largely attributable to reduced predation mortality. There is a need to determine the consequences to population growth effected by the reductions in age and size at maturity, and in mean age and size of spawners, concomitant with population decline. We conclude that reductions in the rate of population decline, in the absence of targets for population increase, will be insufficient to effect a recovery of marine fishes biodiversity, and that great care must be exercised when interpreting multi-species patterns in abundance. Of fundamental importance is the need to explain the geographical, species-specific and habitat biases that pervade patterns of marine fishes recovery and biodiversity.     

First record of Grammicolepis brachiusculus in Portuguese waters

Morphometric and meristic characteristics of a specimen of Grammicolepis brachiusculus Poey caught off the Algarve coast, southern Portugal, are reported. This is the first record of this benthopelagic species in Portuguese waters (including Madeira and Azores Archipelagos) and its fifth finding in the north-eastern Atlantic.     

Molecular systematics, zoogeography, and evolutionary ecology of the atlantic parrotfish genus Sparisoma

Parrotfishes of the genus Sparisoma (Scaridae) are ecologically important tropical reef fishes restricted to the Atlantic Ocean. We investigated phylogenetic relationships among the eight extant species within this genus using mitochondrially encoded 12S and 16S ribosomal genes. Our molecular data support the view that (i) Sparisoma originated approximately 14-35 million years ago (mya), probably in the tropical western Atlantic, off Brazil; (ii) there have been at least four discrete bouts of cladogenesis within the genus, with the most recent one ( approximately 2.8-5.6 mya) involving four events in both the east and the west Atlantic and across the Atlantic; and (iii) the genus invaded the eastern Atlantic on two different occasions, probably by at least two different routes. The data also offer support for Bellwood's ideas concerning the evolutionary changes in adult feeding patterns and habitat use within Scarids. Specifically, they support the evolutionary position of the ecological traits of Sparisoma as intermediate within the family.     

Track analysis of the marine palaeofauna from the Turonian (Late Cretaceous)

Aim  To analyse the worldwide distribution patterns of Turonian marine biotas using a panbiogeographical approach.
Location  Turonian localities of southern and north-eastern Brazil, Mexico, Canada, central Europe, England and Morocco.
Method  Panbiogeographical track analysis.
Results  Nine generalized tracks and six nodes were found. The generalized tracks comprise two vicariant track patterns (one northern and one mid-southern) across the Atlantic.
Main conclusions  The generalized tracks show clearly two separate marine biotas, which were associated with the proto-South Atlantic and the proto-North Atlantic oceans. These generalized tracks, as well as the two vicariant track clusters between the north and south Atlantic, are identified by vicariant relationships shared by most of the taxa analysed, and illustrate the final break up of the Gondwana and Laurasia supercontinents and the consequences of vicariant events for the biogeography of the Atlantic Ocean.     

The shore fishes of Ascension Island

Seventy-one species of shore fishes are recorded from Ascension in a checklist which includes notes on ecology and behaviour. The extraordinary abundance of blackfish, Melichlhys niger , and the aggressive nature of moray eels, Lycodontis moringa , towards man are briefly mentioned. The number of species recorded is low for a tropical island and seems to reflect Ascension's geographical isolation and lack of habitat diversity; 15·7% of Ascension shore fishes (excluding one fish not identified to species level) appear to be endemic to the island, with a further 17·1% known only from Ascension and St Helena; 30·0% are recorded only from the western and central Atlantic, while 7·1% are recorded from the eastern and central Atlantic; 30·0% are widespread Atlantic species. Two new species are described: Taenioconger camelopardalis and Helcogramma ascensionis.     

An assessment of de-calcification procedures for δ13C and δ15N analysis of yellow perch, walleye and Atlantic salmon scales

The scales of three species of fishes, yellow perch Perca flavescens , walleye Sander vitreus and Atlantic salmon Salmo salar , were acidified and the isotopic signatures were compared to non-acidified scales from the same fishes. No significant acidification effects on either carbon or nitrogen isotope signatures were found. Results contrast with earlier literature findings noting significant acidification effects and suggest acidification tests be undertaken before scales are used for temporal reconstruction of fish food web positions.     

First record of Buenia massutii Kovačić, Ordines, & Schliewen, 2017 in the Atlantic Ocean based on molecular and morphological evidences

The recently described Mediterranean goby species, Buenia massutii, was found at the deep shelf in the Gulf of Cádiz (north-eastern Atlantic Ocean). The identification of the specimen was performed using morphological analysis and molecular techniques; including the sequencing of the mitochondrial genes Cytochrome c Oxidase I (DNA barcode) and Cytochrome b. The sequences for Cytochrome b is presented for the first time for B. massutii. The limited migration capability and behaviour of small benthic gobies, the short lifespan of Buenia species, and the oceanographic characteristics of the Strait of Gibraltar suggest the existence of an independent Atlantic population of B. massutii.     

The fishes of Saint Paul's Rocks

Fifty species of fishes are recorded from Saint Paul's Rocks in a checklist which includes notes on ecology and behaviour. The poor species diversity, which is the lowest of any tropical island studied to date, seems to result from the isolation of the Rocks and also their small size and lack of habitat diversity. Large pelagic and semi-pelagic predators, especially Galapagos sharks, are unusually common; 12.1% of identified shore fishes at St Paul's appear to be endemic to the Rocks, while 6.1% are known only from the tropical islands of the mid-Atlantic ridge (St Paul's, Ascension, St Helena); 15.2% are recorded only from Brazil and St Paul's 30.3% are widespread western Atlantic forms that have the central Atlantic as the eastern limit of their range; a further 36.4% are widely distributed throughout the tropical Atlantic. Three new species are described: Anthias salmopunctatus, Stegastes sanctipauli and Enneanectes smithi .     

Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species

Specimens of Starksia were collected throughout the western Atlantic, and a 650-bp portion of the mitochondrial gene cytochrome oxidase-c subunit I (COl) was sequenced as part of a re-analysis of species diversity of western Central Atlantic shorefishes. A neighbor-joining tree constructed from the sequence data suggests the existence of several cryptic species. Voucher specimens from each genetically distinct lineage and color photographs of vouchers taken prior to dissection and preservation were examined for diagnostic morphological characters. The results suggest that Starksia atlantica, Starksia lepicoelia, and Starksia sluiteri are species complexes, and each comprises three or more species. Seven new species are described. DNA data usually support morphological features, but some incongruence between genetic and morphological data exists. Genetic lineages are only recognized as species if supported by morphology. Genetic lineages within western Atlantic Starksia generally correspond to geography, such that members of each species complex have a very restricted geographical distribution. Increasing geographical coverage of sampling locations will almost certainly increase the number of Starksia species and species complexes recognized in the western Atlantic. Combining molecular and morphological investigations is bringing clarity to the taxonomy of many genera of morphologically similar fishes and increasing the number of currently recognized species. Future phylogenetic studies should help resolve species relationships and shed light on patterns of speciation in western Atlantic Starksia.     

Large-scale genetic differentiation of Pagrus pagrus in the Atlantic

Red porgy Pagrus pagrus from the north-eastern, north-western and south-western Atlantic were found to be genetically distinct as determined by mitochondrial DNA analysis. There were no shared composite restriction fragment haplotypes, and nucleotide sequence differences averaged 2% among these locations.     

Historical colonization of the Mediterranean Sea by Atlantic fishes: do biological traits matter?

Since its opening 5.33 million years ago, the Gibraltar Strait has always contributed to the Mediterranean fauna and flora. Despite the increasing importance of the phenomenon, ecological determinants underlying colonization success of Atlantic fishes in the Mediterranean Sea have been poorly investigated. Here we reconstruct the recent historical colonization of the whole Mediterranean Sea by Atlantic fishes and we aim to determine where Atlantic fishes preferentially establish and whether some biological traits and ecological factors can be correlated to the colonization success (climate match, position in the water column, maximum body length, propagules, confamilial resistance, depth). A database on Atlantic fish species records from 1810 to 2006 was built and the colonization rate of each introduced species was estimated. Analysis of Variance, Chi squared test and logistic regression were used to investigate the relationships between ecological variables and colonization success. In addition, an index of asymmetry was used to analyse the relative colonization on the two sides of the Mediterranean Sea. Overall 48.33% of Atlantic species introduced in the Mediterranean Sea succeeded in colonizing eastwards. We found that habitat depth of Atlantic species is significantly related to their colonization success due to the obstacle of the shallow depth of the Gibraltar Strait (300 m). It also appears that despite the cyclonic general water circulation on the North Western basin, the northern side is more colonized than the southern one: 70.40% of the studied species colonize the northern side, while only 29.62% colonize the southern one. Two hypotheses may explain this trend: the bottom-up process that enhances the colonization success of Atlantic fishes along the Spanish coast of Alboran Sea owning to its high productivity and the intensiveness of the scientific explorations along the northern Mediterranean side. We conclude that crossing the Gibraltar Strait does not guarantee the colonization success and that species life-history and functional traits are poor predictors. Instead we suggest that environmental factors may determine favourable locations for invasive species installation. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users. Handling editor: J. Cambray.