Sighting of Stenella attenuata, the spotted dolphin, in Culebra Bay, Costa Rica, 1999-2000

Parallel to a zooplankton study (1999-2000) observations were made (from an inflatable boat), on the presence of dolphins along a transect (-8 km long) on the axis of Culebra Bay (24 km2), Gulf of Papagayo, Pacific coast of Costa Rica. Dolphins were found during 20 of the 31 boat surveys conducted. The only species of cetacean found in the bay was Stenella attenuata, the spotted dolphin. These sightings were more frequent during the rainy season, particularly during the month of May of both years. The presence of S. attenuata in Culebra Bay might be associated to the abundances of fish and mollusks (their presumed prey: for example, squids), as evidenced by fishery statistics available for this zone of the Pacific coast of Costa Rica.     

Isolation and genetic characterization of Toxoplasma gondii from striped dolphin (Stenella coeruleoalba) from Costa Rica

Toxoplasma gondii infection in marine mammals is of interest because of mortality and mode of transmission. It has been suggested that marine mammals become infected with T. gondii oocysts washed from land to the sea. We report the isolation and genetic characterization of viable T. gondii from a striped dolphin (Stenella coeruleoalba), the first time from this host. An adult female dolphin was found stranded on the Pacific Coast of Costa Rica, and the animal died the next day. The dolphin had a high (1:6400) antibody titer to T. gondii in the modified agglutination test. Severe nonsuppurative meningoencephalomyelitis was found in its brain and spinal cord, but T. gondii was not found in histological sections of the dolphin. Portions of its brain and the heart were bioassayed in mice for the isolation of T. gondii. Viable T. gondii was isolated from the brain, but not from the heart, of the dolphin. A cat fed mice infected with the dolphin isolate (designated TgSdCol) shed oocysts. Genomic DNA from tachyzoites of this isolate was used for genotyping at 10 genetic loci, including SAG1, SAG2, SAG3, BTUB, GRA6, c22-8, c29-2, L358, PK1, and Apico, and this TgSdCo1 isolate was found to be Type II.     

Complete amino acid sequence of the myoglobin from the Pacific spotted dolphin, Stenella attenuata graffmani.

The complete amino acid sequence of the major component myoglobin from the Pacific spotted dolphin, Stenella attenuata graffmani, was determined by the automated Edman degradation of several large peptides obtained by specific cleavage of the protein. The acetimidated apomyoglobin was selectively cleaved at its two methionyl residues with cyanogen bromide and at its three arginyl residues by trypsin. By subjecting four of these peptides and the apomyoglobin to automated Edman degradation, over 80% of the primary structure of the protein was obtained. The remainder of the covalent structure was determined by the sequence analysis of peptides that resulted from further digestion of the central cyanogen bromide fragment. This fragment was cleaved at its glutamyl residues with staphylococcal protease and its lysyl residues with trypsin. The action of trypsin was restricted to the lysyl residues by chemical modification of the single arginyl residue of the fragment with 1,2-cyclohexanedione. The primary structure of this myoglobin proved to be identical with that from the Atlantic bottlenosed dolphin and Pacific common dolphin but differs from the myoglobins of the killer whale and pilot whale at two positions. The above sequence identities and differences reflect the close taxonomic relationship of these five species of Cetacea.     

Postural instability and akinesia in a pantropical spotted dolphin,Stenella attenuata,in proximity to operating airguns of a geophysical seismic vessel

Aberrant behaviour including erratic locomotion was observed in a pantropical spotted dolphin 600 m ahead of an airgun array during 3D seismic explorations off Liberia in March 2009. The dolphin, presumably in acoustic distress, lifted its head and cervical region above the surface in an oblique, strikingly rigid posture during 5 min. Turbulent white-water evidenced a major propulsory thrust. Incremental postural instability and apparent exhaustion progressed to a catatonic-like state of akinesia as the dolphin rolled over onto one side, then its back before sinking virtually motionless close to the airgun array. Unless it recovered full locomotory control, asphyxiation was inevitable. Potential internal injury is discussed, both acoustic-mediated and from extreme exertion (exertional myopathy, rhabdomyolysis and myoglobinuric nephrosis). As behaviour was spatially and temporally closely associated with firing seismic airguns, we suggest a cause–effect relationship. Differential diagnoses of pre-existing morbidity, senescence, or intoxication are considered possible but unlikely.     

Seawater temperature measured at the surface and at two depths (7 and 12 m) in one coral reef at Culebra Bay, Gulf of Papagayo, Costa Rica

Superficial seawater temperature (SST) and at two depths (7 and 12 m) were measured non-continuously during the study of the corals and coral reefs of Culebra Bay (1993-1996). SST showed seasonal variations of approximately 4 degrees C. The highest average temperatures (27.0 +/- 0.1, range 23-29 degrees C) were during the rainy season from May to November and the lowest (22.9 +/- 0.3 degrees C, 15.5-29 degrees C) during the dry season from December to April. Cold fronts with 2-3 degrees C differences in SST frequently pass into the bay and remain there for several hours according to the tidal cycles. Differences of approximately 3 degrees C between SST and the bottom (5-10 m depth) were usually found, particularly at locations where bottom topography and tidal circulation produced tidal bores. The average temperatures recorded by data loggers placed at 7 and 12 m depth on a coral reef at the outer shores of Culebra Bay, were 27.1 +/- 0.02 degrees C (20.5-31.6 degrees C) and 25.8 +/- 0.04 (9.9-31.5 degrees C) respectively. The seasonal pattern of higher and lower temperatures corresponds respectively to the rainy and dry season of the northern Pacific coast of Costa Rica. Water temperature at 12 m was < 14 degrees C for some hours during an upwelling event whilst minimum temperatures at 7 m were > or = 22 degrees C. Negative temperature anomalies coincided with an increase of the NE-E winds intensity and there is a lunar and tidal component which influence diumal variations of temperature. These results suggest that coral reefs built by branching species (e.g. Pocillopora spp.) in Culebra Bay could be limited by both the influence of cold fronts and by seasonal upwellings which affect negatively those coral species, as reported for other locations in the tropical eastern Pacific.     

The diversity and distribution of the cetaceans of Costa Rica (Cetacea: Delphinidae, Physeteridae, Ziphiidae y Balaenopteridae)

The first complete checklist of Costa Rican cetaceans is presented with a total of 28 species (35% of the group's world diversity). Most of the species occur in the Pacific Ocean (89%) and most are considered oceanic (57%), common (54%) and resident (68%). The known distribution and status of each species are also provided.     

On Branchiostoma californiense (Cephalochordata) from the Gulf of Nicoya estuary, Costa Rica

The cephalochordates are represented by the lancelets, of which species of the genus Branchiostoma are the best known. In recent years, these organisms have been the center of activity of studies focusing on the phylogenetic relationships of the chordates. In 1980, a survey of the benthos at 48 stations in the Gulf of Nicoya estuary, Pacific coast of Costa Rica, yielded 265 specimens of the lancelet Branchiostoma californiense. A total of 48 specimens was also collected at an intertidal flat in the mid upper estuary. Of the 48 subtidal stations, only eight had B. californiense, and these sites all had a sand fraction above 72%. The remaining stations ranged in their sand content from as low as 1% to as high as 92%, with an average of 25.9%, with 29 stations having a sand content lower than 72%. Lower salinities and muddy sediments may limit the distribution of the lancelet further upstream. This information is useful when changes over decades in the ecology of the estuary need to be evaluated against the background of local, regional, and global dynamics.     

Variation of thermohaline properties in the Nicoya Gulf, Costa Rica

The time-space behavior of thermohaline properties of the water masses in the Gulf of Nicoya, a tropical estuary in the Costa Rican Pacific coast, was studied by sampling monthly from April 1992 to April 1993. The saline field has a seasonal maximum during April, a month before the maximum temperature is observed. Minimun values were observed during October and November, in the rainy season. A defined surface saline front is located towards the east of Negritos Islands; it is produced by the interaction of freshwater from the Tarcoles River and the oceanic waters that enter through the occidental coast of the gulf. The vertical distribution of temperature and salinity indicates a gulf whose internal area is highly stratified in the rainy season, and much less stratified, or even well mixed in the dry season. The outer area of the Gulf is stratified throughout the year.     

Composition, abundance and distribution of macrozooplankton in Culebra Bay, Gulf of Papagayo, Pacific coast of Costa Rica and its value as bioindicator of pollution

The abundance, distribution and composition of the macrozooplankton of Culebra Bay, Costa Rica (10 degrees 38' N - 85 degrees 40' W) were studied at four stations throughout the dry (February-May) and rainy (September-November) seasons of 2000. The samples were collected at two-week intervals using a 500 microm mesh net with a 0.5 m diameter opening. Copepods (23-31%) and ostracods (20-34%) were predominant throughout the year, followed by cladocerans (2.5-14%), zoea (6.6-9.5%), and siphonophores (2.5-7.2%). High densities of zooplankton were obtained in February and March with peak abundance on March 18. The lowest densities were observed on September 3 and November 5. Significant differences in abundances at each station were observed for the groups Acartia tonsa (Copepoda), Ctenophora, Medusae, Ostracoda, Zoea, and Amphipoda. Comparison of the dry and rainy seasons revealed significantly higher zooplankton abundance in the dry season and copepod domination of all stations; during the rainy season ostracods dominated the off-shore areas. Zooplankton abundance and distribution are influenced by upwelling, which occurs during the dry season in Culebra Bay.     

A biogeochemical model for the Gulf of Nicoya, Costa Rica

In agreement with the Broecker and Penn two-boxes model, I generated a biogeochemical balance model for the Gulf of Nicoya (Guanacaste, Costa Rica) using two nutrient reservoirs: surface water and deep water. The mixing zone was located at a depth of 20 m. There is a balance between surface waters descending to the bottom and upwelling waters that carry nutrients and other chemical elements to the surface. The main source of nitrogen (nitrate), was the outlet of the Tempisque and Tárcoles rivers. The Gulf of Nicoya is a net source of Dissolved Inorganic Nitrogen (DIN) with an availability rate of 87 x 10(3) mol day(-1) in the dry season and 3044 x 10(3) mol day(-1)in the rainy season. Dissolved Inorganic Phosphate (DIP) was estimated in 27 mol day(-1) in the dry season and 207 mol day(-1) in the rainy season. The dynamics of these biolimited nutrients, in relation to runoff seasonal variations, fits the biological processes reported for the gulf, for example, for variations in primary productivity levels, and maturity and reproduction seasons for species with short and long life cycles.     

Hydroacoustic estimation of fish biomass in the Gulf of Nicoya, Costa Rica

A stratified sampling design was used for a hydroacoustic survey of the inner parts of the Gulf of Nicoya in 1987 and 1988. The bottom topography of the inner Gulf was modeled by introducing the concept of a topographical basin model, as the basis for the projection of the sample survey estimates to the entire inner gulf. The bottom depth contours and volumes for the basin model were constructed from nautical charts. The estimates of sample abundance were made for the fish in the inner Gulf using the acoustic methods, EMS (Expectation Maximization and Smoothing) and echo integration. The estimates of population were made by the multiplication of the topographic model's estimate of water volume and a model of fish density dependent on bottom depth. The results showed a general decrease in fish density biomass with bottom depth, and a simultaneous tendency for maximum concentrations over bottom depths of about four meters. The four meter bottom depth includes a broad expanse of the inner Gulf located south of Isla Chira. Overall estimates of volumetric density (0.269 fish/m3) and of areal densities (1.88 fish/m2) are comparable to other estuarine shallow water environments.     

Some features of ocean currents in Gulf of Nicoya, Costa Rica

The spatial and vertical structure of the water currents and its relationship with the tidal cycles were studied using current meters in the Gulf of Nicoya. In the upper gulf, the vertical marine current differences increase as the depth increases. The water column at the station near Chira Island (upper gulf) shows the smaller changes in currents and in temperature. The flow at the station between San Lucas Island and Puntarenas (middle gulf) is the most stratified in this region. Currents with magnitudes over 100 cm/seg were measured during spring tides. Changes in the lags of the surface and bottom tidal flows were measured on the order of 100 minutes. In general, in this upper region the flows are toward the head of the gulf when the tide is flooding and toward the mouth when the tide is ebbing. In the lower gulf the circulation is more complex. Along an axis between Tárcoles and Negritos Islands, changes of velocity vectors are identified between surface and bottom. The current rotates in a different way in the water column in this region and their patterns cannot be explained only by the tidal cycles predicted for Puntarenas. These results demonstrate that the spatial and vertical variation of the marine currents of the Gulf of Nicoya is not only related to the thermohaline structure, but also to the tidal cycles and tide ranges that take place in this estuary.     

Nasitrema sp.-associated encephalitis in a striped dolphin (Stenella coeruleoalba) stranded in the Gulf of Mexico.

An immature female striped dolphin (Stenella coeruleoalba) found dead on a northwestern Florida beach in 1988 exhibited severe inflammation bilaterally in the dorsal and mid-thalamus in association with adult trematodes (Nasitrema sp.) and trematode eggs. Numerous specimens of Nasitrema sp. also were present in the pterygoid sinuses. Pneumonia in association with a heavy growth of Vibrio damsela was observed also. This report confirms the occurrence of Nasitrema sp.-associated encephalitis in striped dolphins and in small cetaceans from the Gulf of Mexico.     

Feeding habits of raccoon (Procyon lotor) (Carnivora: Procyonidae) in a coastal,tropical wet forest of Costa Rica

Raccoon (Procyon lotor) food habits were studied at Manuel Antonio National Park, a tropical rain forest in the Pacific coast of Costa Rica from May to December 1987, from September to December 1989 and from January to April 1990. A 134 feces sample size was used to assess the most important items in raccoon diet: two crab species (Gecarcinus quadratus and Cardisoma crassum) with a relative frequency of 0.94 in the rainy season of 1987, 0.76 in the rainy season of 1989 and 0.65 in the dry season of 1990. Fruits were the second category in importance, with relative frequencies of 0.09 for 1987, 0.32 for 1989 and 0.44 for 1990.     

Identification of marine and coastal biodiversity conservation priorities in Costa Rica

Costa Rica is recognized as one of the most diverse countries in species and ecosystems, in their terrestrial realm as well as in the marine. Besides this relevance, the country presents a delay on conservation and management of marine and coastal biodiversity, with respect to terrestrial. For 2006, the marine protected surface was 5,208.8 km2, with 331.5 km of coastline, in 20 protected areas. The country has made progress on the conservation priority sites identification for terrestrial and freshwater biodiversity, with few efforts on marine planning. This research presents the analysis and results of the gap identification process, for marine and coastal biodiversity conservation in the protected areas system of Costa Rica. The analysis was built with the spatial information available on the presence and distribution of coastal and marine biodiversity, the establishment of the conservation goals and a threat analysis over the ecological integrity of this biodiversity. The selection of high-priority sites was carried out using spatial optimization techniques and the superposition over the current shape of marine protected areas, in order to identify representation gaps. A total of 19,076 km2 of conservation gaps were indentified, with 1,323 km2 in the Caribbean and 17,753 km2 in the Pacific. Recommendations are aimed at planning and strengthening the marine protected areas system, using the gaps identified as a framework. It is expected that the results of this study would be the scientific base needed for planning and sustainable use of marine biodiversity in the country.     

Anatomy and physics of the exceptional sensitivity of dolphin hearing (Odontoceti: Cetacea)

During the past 50 years, the high acoustic sensitivity and the echolocation behavior of dolphins and other small odontocetes have been studied thoroughly. However, understanding has been scarce as to how the dolphin cochlea is stimulated by high frequency echoes, and likewise regarding the ear mechanics affecting dolphin audiograms. The characteristic impedance of mammalian soft tissues is similar to that of water, and thus no radical refractions of sound, nor reflections of sound, can be expected at the water/soft tissue interfaces. Consequently, a sound-collecting terrestrial pinna and an outer ear canal serve little purpose in underwater hearing. Additionally, compared to terrestrial mammals whose middle ear performs an impedance match from air to the cochlea, the impedance match performed by the odontocete middle ear needs to be reversed to perform an opposite match from water to the cochlea. In this paper, we discuss anatomical adaptations of dolphins: a lower jaw collecting sound, thus replacing the terrestrial outer ear pinna, and a thin and large tympanic bone plate replacing the tympanic membrane of terrestrial mammals. The paper describes the lower jaw anatomy and hypothetical middle ear mechanisms explaining both the high sensitivity and the converted acoustic impedance match.     

Centruroides Schmidti (scorpiones: Buthidae) in Costa Rica

Centruroides schmidti Sissom, 1995 is the new identification designate of the scorpions previously known as C. thorelli (Kraepelin, 1891) in Northwest Costa Rica. The geographical distribution of the species in this country is established on the basis of new collected material. Its distribution includes the Pacific slope of the Guanacaste volcanic range, and the Pacific and Atlantic slopes of the Tilarán volcanic range between 50 and 775 m elevation above sea level, within the Costa Rican Guanacaste and Alajuela provinces.     

Seasonal variation in proximate composition of mussels Tagelus peruvianus (Bivalvia: Solecurtidae) from the Gulf of Nicoya, Puntarenas, Costa Rica

Marine bivalves are a very important food source for human consumption, and species that has not been of traditional use as a fishery resource are gaining interest. Seasonal variation in proximate composition, condition index and energy or caloric content of the mussel Tagelus peruvianus were studied in the Gulf of Nicoya, Puntarenas, Costa Rica. From November 2007 to October 2008, a total of 35 to 40 specimens per month were collected. The proximate composition using the AOAC methods was determined. Results showed that the condition index during December, January and May decreased, indicative of two spawning periods and one gonadal resting phase. Soft tissues were respectively characterized by protein (61.9 +/- 4.3%), carbohydrates (15.7 +/- 2.4%), ash (14.0 +/- 1.9%) and lipids (8.5 +/- 1.7%). The average caloric content was 5.0 +/- 0.1 kcal/g. The results showed that the decrease in protein and fat percentage, and calories content, occurred during the spawning seasons. We suggest that T. peruvianus has an optimal nutritional value for human consumption because of the low-fat and moderate protein content.