The response of a harpacticoid copepod community to sediment disturbance in a semi-enclosed lagoon

The harpacticoid fauna of a sandy sediment in the Sluice Dock of Ostend, Belgium, was dominated by a single species, Canuella perplexa, that attained an average annual density of over 400 ind. 10 cm^–2 in 1976 and 1977, whereas other species had a total mean density of less than 10 ind. 10 cm^–2. In the summer of 1979 a dystrophic crisis with abundant growth of Ulva occurred and in March 1980 the lagoon was drained. After refilling of the lagoon, the sediment was immediately colonized by good swimming harpacticoids, that attained densities of 200 ind. 10 cm^–2. Three months after refilling Canuella perplexa reappeared and the system returned to its original state within one month.     

Anthropogenic disturbance and spatial heterogeneity of macrobenthic invertebrate assemblages in coastal lagoons: the study case of Pialassa Baiona (northern Adriatic Sea)

The distribution patterns of macrobenthic invertebrate assemblages at different spatial scales and in relation to natural and anthropogenic disturbance gradients were investigated in the Pialassa Baiona, a eutrophic and polluted brackish coastal lagoon located along the Italian coast of the northern Adriatic Sea. This coastal lagoon shows a complex physiography with several shallow water ponds and channels separated by discontinuous artificial embankments. Environmental variables and macrobenthic invertebrate assemblages showed higher heterogeneity at small spatial scale (i.e. within channels and ponds). Distinction between channels and ponds is only weakly supported by the distribution patterns of macrobenthic assemblages. Depth was the major factor in structuring benthic communities within ponds, while species distributions along the channels were strongly correlated with the anthropogenic disturbance gradient. Anthropogenic disturbance mainly affected species richness, which was inversely correlated with the organic carbon contents in the sediments and the water surface temperature, which is affected by the input of cooling water from two thermal power plants. Some opportunistic species, like the polychaetes Streblospio shrubsolii and Capitella capitata, were more abundant in the southern polluted areas. In particular, the abundance of S. shrubsolii significantly increased with organic carbon contents in the sediments and water surface temperature, while C. capitata was more abundant in the warmed sites and close to sewages. Conversely, the abundance of the amphipod Corophium insidiosum was inversely related to organic carbon contents.     

Geochemistry of recent marine sediments in the Bardawil lagoon,northern Sinai,Egypt

The concentrations of major (Al, Fe, Mg, Ti, K and Na) and minor (Ba, Sr, V, Cu, Mn, Cr, Ni, Zn, Pb and Mo) elements as well as carbonate, organic carbon and total nitrogen have been determined in surface sediments collected at 12 stations from the Bardawil lagoon. The aim of the study was to characterize the geochemistry of the sediments in three different environments, the lagoon, the salt pans and the inlet between the lagoon and the Mediterranean Sea. Higher CaCO₃ percentage (53.5–70.5%) were found in the salt pans where biogenic calcareous components and carbonate rock fragments were found in sufficient quantities in the sediment fractions. Based on high C/N ratios, the organic carbon fraction of the Bardawil lagoon surface sediments is clearly dominated by terrigenous material. The distribution of Al, Fe, Mg and Ti are essentially controlled by the mineralogy of the sediments. The ratios of Ba, Sr, Cu, Mn, Pb and Mo to Al are all high in the salt pans and reflect changes in mineralogy and sediment texture.     

Macrozoobenthic community structure in a poikilohaline Mediterranean lagoon (Laki Lagoon, northern Aegean)

The community structure of the macrobenthic fauna was studied in the overall area of Laki Lagoon in September 1997 (salinity 32–35 psu) and monthly from February 1998 to February 1999 in the innermost part of the lagoon (salinity 0.1–6.8 psu). Community structure was analyzed by means of uni- and multivariate methods. In September 1997, the macrofauna in the outer part of the lagoon was characterized by a higher diversity and the occurrence of both lagoonal and marine species, and in the innermost part by a higher total abundance and the occurrence of a few lagoonal species. The combination of distance from the sea, depth, salinity and sediment organic matter correlated best with the spatial distribution pattern of the macrobenthic fauna. Community structure in the innermost part of the lagoon showed a seasonal periodicity. Species composition during spring 1998, at 0.1–2.0 psu, was similar to that in September 1997. During summer the macrobenthic fauna became impoverished, but recovered from late summer onwards. The salinity increase during summer (up to 5–7 psu) was followed by the appearance of marine species in the innermost part of the lagoon. Total abundance displayed a peak in late spring and a lower one in mid-autumn. The seasonal dynamics of the faunal assemblage was mainly governed by water temperature. Predation pressure by Atherina boyeri may have contributed to quantitative community changes during autumn.     

Concentrations of nitrogen in sandy sediments of a eutrophic estuarine lagoon

Concentrations of sediment organic nitrogen, dissolved inorganic nitrogen (ammonium, nitrite and nitrate), and dissolved organic nitrogen (DON) in sediments were measured at two sites in a eutrophic estuarine lagoon. One is a shallow aerobic site where macrobenthos are abundant and the other is a deep anaerobic site devoid of macrobenthos. Four species of macrobenthos (Bivalvia: Corbicula japonica, Annelida: Notomastus sp., Neanthes japonica and Oligochaeta sp.) were found in 8 sandy sediment cores collected at a shallow site in three succcessive summers. DON (170–1500 μg atom N l-1) was the major constituent of dissolved nitrogen with 10 times greater concentration than ammonium (55–180 μg atom N l-1) and 1000 times greater than nitrate (0.14–5.9 μg atom N l-1) and nitrite (0.21–1.4 μg atom N l-1). The ammonium content in anaerobic muddy sediments at the deep site (210–350 μg atom N l-1) was higher than in aerobic sandy sediments, whereas DON was higher in aerobic sediments than anaerobic sediments (90–240 μg atom N l-1). In aerobic sediments, depth profiles of DIN were nearly constant whereas DON was mostly highest at the surface. On the other hand, the increase of DON and ammonium was observed where macrobenthos was found. The occurrence of macrobenthos and high content of DON and ammonium content in the layers of sediment may suggest the influence of macrobenthos in the partitioning of nitrogen species through their motion and excretion. This revised version was published online in July 2006 with corrections to the Cover Date.     

Diel and seasonal vertical distribution of meiobenthic copepods in muddy sediments of a eutrophic lagoon (fish ponds of Arcachon Bay)

The vertical distribution of meiobenthic copepods was investigated within muddy sediments of a eutrophic lagoon (fish ponds of Arcachon Bay, France). The aim of the study was to determine if in muddy sediments, as previously established in sandy sediments, meiobenthic copepods migrate vertically according to the seasons or diel periods. Two experimental approaches were used, viz: a three-season comparison was made of the diel vertical distribution of the harpacticoid Canuella perplexa T. & A. Scott (1893) and secondly the depth distribution of a meiobenthic copepod assemblage was followed for a 24 h period, in shallow water subtidal locations. The harpacticoid C. perplexa vertically migrated through the top three centimeters of the sediment, showing diel and seasonal variations in depth distribution. The differential vertical distributions shown by the dominant meiobenthic populations suggest that emergence into the water column may mainly concern surface dwelling copepods. The physical and biological factors affecting seasonal and diel changes in the copepod assemblage of the fish ponds are discussed.     

Macrobenthic communities in a tropical lagoon (Tahiti, French Polynesia, central Pacific)

Soft bottom communities were sampled quantitatively in Tahiti lagoon (French Polynesia) at 18 stations in five zones around the island over 1 year. In addition, various environmental parameters (silt/clay fractions, organic content, chlorophyll and phaeopigment content) were sampled at the same stations over 2 years. The temporal and spatial variabilities of the macrobenthic communities are described and related to these environmental parameters. Each zone ran from the fringing reef to the inner flat of the barrier reef. The macrofauna exhibited a high richness (392 taxa) with an average mean biomass of 1.8 g AFDW m⁻² (grams ash-free dry weight per square metre). These communities exhibited temporal but not seasonal fluctuations. The biomass of the macrofauna increased from the fringing to the barrier reefs, and the density of individuals was significantly higher on the fringing reefs. Ordination techniques highlighted four groups of stations characterised by distinctive species composition, density and biomass. The first group included stations located on the inner flat of the barrier reef and in the shallow lagoon area and was characterised by highly diverse communities dominated by polychaetes. The second group primarily included stations from the industrial and hotel zones. This group had the lowest diversity and was also dominated by polychaetes, especially the capitellid Dasybranchus sp. 1. The third group was dominated by gastropods and bivalves. The final group of stations was represented only by station 51, in zone 5, which was characterised by mobile soft sediments and wave action and was dominated by the decapod Hippa cf. pacifica. Presumably, these mobile sediments facilitate the development of this benthic community, which does not occur elsewhere in the lagoon. The diversity and biomass of these benthic communities are low compared with most other areas in the South Pacific. Accepted: 10 May 2000     

Reconstruction of the former charophyte community out of the fructifications identified in Albufera de València lagoon sediments

Several decades ago, due to eutrophication, Albufera de València lagoon lost the charophyte meadows that covered the bottom in the past but had never been studied in detail. An area close to the lagoon will be restored now to improve water quality and to recover submerged vegetation. To have information on the background of the charophytes from this area, four 80-87 cm long sediment cores were extracted from the lagoon. The subfossil charophyte fructifications (oospores and gyrogonites) were isolated and identified in two of the four cores. Moreover, sediment core fractions from the third and fourth cores were allowed to germinate under several conditions. The study of the lagoon sediments has revealed that at least 11 morphologies of charophyte fructifications existed in the past. Ten of these were determined at species level: Chara vulgaris, Chara hispida, Chara aspera, Chara baltica, Chara tomentosa, Chara globularis, Lamprothamnium papulosum, Nitella hyalina, Tolypella glomerata and Tolypella hispanica. However, one form of Chara gyrogonite did not fit in any known species. L. papulosum oospores and gyrogonites were the most abundant and concentrated in the deepest sediment layers when the lagoon held brackish water. Large changes in salinity due to freshwater input drove charophyte species substitution (disappearance of L. papulosum). During the oligohaline period C. vulgaris sexual propagules were the most abundant. The last charophyte community before its disappearance due to eutrophication was composed mainly of C. hispida, C. tomentosa and N. hyalina (the two latter with small numbers of oospores in the sediment). To characterize the morphology of the unidentified gyrogonite species, 100 specimens were studied. This type could be a local variety of a more common species, probably C. vulgaris, grown under particular ecological conditions. Old collected oospores (more than 45 years old) germinated and could be identified as C. vulgaris and C. hispida.     

Relationships Between Chemical Characteristics of Sediments and Macrofaunal Communities in the Cabras Lagoon (Western Mediterranean,Italy)

The Cabras lagoon is a large and shallow transitional system which periodically suffers from dystrophic events leading to massive losses of its biological resources. Excessive organic matter (OM) and sulphur compounds in sediments are often claimed to be major environmental co-factors triggering these events. However, still limited information is available on their relationships with benthic macrofaunal communities in coastal lagoons. In order to assess these relationships, we conducted monthly field investigations between 2001 and 2002, at three regularly-spaced stations set between the inlet and the mouth of the Cabras lagoon. Results showed reduced conditions of sediments, worsening during the warm season. This was consistent with very high OM contents, up to >‰20%, with annual means of 14–16%. Organic pollution-tolerant taxa, such as Tubificidae nc, Neanthes succinea and Polydora ciliata, dominated poor macrofaunal communities. Results of multivariate analysis indicated significant differences in both environmental variables and macrofaunal community structure and species composition between stations and through different periods. This study documented for the first time in a coastal lagoon that inorganic reduced sulphur pools (acid volatile sulphide and chromium reduced sulphur) of sediments are leading (‚best-matching’) environmental factors influencing the spatial and temporal distribution of macrofaunal abundance and biomass. We conclude that impoverished macrofaunal communities in the Cabras lagoon may show a slight recovery during winter–spring, but tend to regress to an early stage of faunal succession in late summer. We suggest that the combination of excessive amounts of sedimentary organic matter and high temperatures tends to lead to anoxic conditions especially in relatively deeper and more saline waters. These events may concur to periodic increase of production rates of toxic hydrogen sulphide in sediments, which rapidly diffuses to the water column with deleterious effects both on the benthic and pelagic components of the lagoon ecosystem.     

Microbial population changes during bioremediation of nitroaromatic- and nitramine-contaminated lagoon

Nitration reactions of aromatic compounds are commonly involved in military industrial processes. Military industries treated their process effluents using lagoon systems for many years. In this study, the sediment of a lagoon was investigated from a bioremediation objective. The physico-chemical characterization of the sediments showed the organic nature of the sediment (25.4% carbon with a C:N=3) highly concentrated in RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), HMX (octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine) as well as two herbicides Dinoterb (2-tert-butyl-4,6-dinitrophenol) and Dinoseb (2-sec-butyl-4,6-dinitrophenol). Analysis of the 16S rRNA gene clone library revealed the presence of three dominant families, Geobacteriacea, Clostridiaceae and Pseudomonaceae. A bioremediation assay was carried out in anaerobic conditions in order to degrade organic compounds. In these conditions, 100% of Dinoterb and Dinoseb were degraded after 75 days of culture, while RDX and HMX were not consumed. The 16S rRNA gene clone library analysis of this incubation showed a drastic reduction of the final biodiversity composed by clones related to Enterobacteriaceae (especially Leclercia adecarboxylata) and Pseudomonaceae family. It was then suggested that Enterobacteriaceae and Pseudomonaceae were potentially involved in biodegradation of these two herbicides. To confirm this hypothesis, cultures were carried out with isolated species of Pseudomonas putida, Pseudomonas citronellolis and L. adecarboxylata in the presence of Dinoterb. The data confirmed that in the presence of glucose, these microorganisms are able to consume Dinoterb.     

Ammonification rates and 210Pb in sediments from a lagoon under a wet tropical climate: Marica,Rio de Janeiro state,Brazil

The ammonification rates in surficial sediments of the Marica lagoon (Rio de Janeiro, Brazil) were estimated using two methods:

Sediment-benthos relationships as a tool to assist in conservation practices in a coastal lagoon subjected to sediment change

This study explores the relation between sediment composition and intertidal macrobenthos populations in the Zwin nature reserve (Belgium and The Netherlands), a tidal lagoon that is included in the Ramsar list of wetlands of international importance and has been designated as Natura 2000 area, among others due to its function as wintering habitat for shorebirds that feed upon macrobenthic invertebrates. Species response models show highest biomass of these prey species in organically enriched cohesive sediments and a distinct decline in probability of occurrence for most species in coarse sediments. Further, the biomass of macrobenthos declined between 2003 and 2010 in the extensive low intertidal inlet channel concurrent with the coarsening of the sediment over time in this hydrodynamically stressed habitat. In contrast, macrobenthos biomass increased in a sheltered shallow intertidal habitat that acted as a catchment area for finer sediments, therefore facilitating the succession towards a higher elevated habitat with salt marsh vegetation establishment. Hence, spatio-temporal sediment dynamics decreased site quality for intertidal predators due to a reduction in feeding areas over time, and a change in physical sediment properties that alter the macrobenthos species occurrence and population biomass. This study thus illustrates that sediment transport dynamics may affect the functioning of coastal shallow soft-sediment habitats, like coastal lagoons. The presented macrobenthos species response models provide a tool to assist in management actions that enable the conservation of cohesive low intertidal habitats that provide a high food supply to shorebirds, fish and macrocrustaceans.     

Feeding and growth of Japanese scallop inhabiting different bottom sediment types

Two parts of the population of Japanese scallop Mizuhopecten yessoensis inhabiting sites with different bottom sediments in an open part of Peter the Great Bay of the Sea of Japan were compared. The scallops grew slower on muddy site compared to sandy site despite better food availability at muddy site. The food sources were determined using fatty acids as biomarkers. Analysis of the fatty acid composition of the scallops has identified diatom plankton, flagellates, and invertebrate larvae as the main scallop food sources. Benthic bacteria insignificantly contributed to the scallop diet. The food composition slightly varied in scallops on different sediment types. Most likely, low oxygen content in water, high resuspension of fine sediment particles rich in dead organic matter, and high content of contaminants accumulated in muddy sediments are the main factors of decelerated growth of scallops on muddy sites.     

Variable Importance of Macrofaunal Functional Biodiversity for Biogeochemical Cycling in Temperate Coastal Sediments

Coastal marine systems are currently subject to a variety of anthropogenic and climate-change-induced pressures. An important challenge is to predict how marine sediment communities and benthic biogeochemical cycling will be affected by these ongoing changes. To this end, it is of paramount importance to first better understand the natural variability in coastal benthic biogeochemical cycling and how this is influenced by local environmental conditions and faunal biodiversity. Here, we studied sedimentary biogeochemical cycling at ten coastal stations in the Southern North Sea on a monthly basis from February to October 2011. We explored the spatio-temporal variability in oxygen consumption, dissolved inorganic nitrogen and alkalinity fluxes, and estimated rates of nitrification and denitrification from a mass budget. In a next step, we statistically modeled their relation with environmental variables and structural and functional macrobenthic community characteristics. Our results show that the cohesive, muddy sediments were poor in functional macrobenthic diversity and displayed intermediate oxygen consumption rates, but the highest ammonium effluxes. These muddy sites also showed an elevated alkalinity release from the sediment, which can be explained by the elevated rate of anaerobic processes taking place. Fine sandy sediments were rich in functional macrobenthic diversity and had the maximum oxygen consumption and estimated denitrification rates. Permeable sediments were also poor in macrobenthic functional diversity and showed the lowest oxygen consumption rates and only small fluxes of ammonium and alkalinity. Macrobenthic functional biodiversity as estimated from bioturbation potential appeared a better variable than macrobenthic density in explaining oxygen consumption, ammonium and alkalinity fluxes, and estimated denitrification. However, this importance of functional biodiversity was manifested particularly in fine sandy sediments, to a lesser account in permeable sediments, but not in muddy sediments. The strong relationship between macrobenthic functional biodiversity and biogeochemical cycling in fine sandy sediments implies that a future loss of macrobenthic functional diversity will have important repercussions for benthic ecosystem functioning.     

Determination of Key Environmental Factors Responsible for Distribution Patterns of Fiddler Crabs in a Tropical Mangrove Ecosystem

In tropical regions, different species of fiddler crabs coexist on the mangrove floor, which sometimes makes it difficult to define species-specific habitat by visual inspection. The aim of this study is to find key environmental parameters which affect the distribution of fiddler crabs and to determine the habitats in which each species was most abundant. Crabs were collected from 19 sites within the mudflats of Sepang-Lukut mangrove forest. Temperature, porewater salinity, organic matter, water content, carbon and nitrogen content, porosity, chlorophyll content, pH, redox potential, sediment texture and heavy metals were determined in each 1 m² quadrate. Pearson correlation indicated that all sediment properties except pH and redox potential were correlated with sediment grain size. Canonical correspondence analysis (CCA) indicated that Uca paradussumieri was negatively correlated with salinity and redox potential. Sand dwelling species, Uca perplexa and Uca annulipes, were highly dependent on the abundance of 250 μm and 150 μm grain size particles in the sediment. Canonical Discriminative Analysis (CDA) indicated that variation in sediment grain size best explained where each crab species was most abundant. Moreover, U. paradussumieri commonly occupies muddy substrates of low shore, while U. forcipata lives under the shade of mangrove trees. U. annulipes and U. perplexa with the high number of spoon tipped setae on their second maxiliped are specialized to feed on the sandy sediments. U. rosea and U. triangularis are more common on muddy sediment with high sediment density. In conclusion, sediment grain size that influences most sediment properties acts as a main factor responsible for sediment heterogeneity. In this paper, the correlation between fiddler crab species and environmental parameters, as well as the interaction between sediment characteristics, was explained in order to define the important environmental factors in fiddler crab distributions.     

The subtidal macrobenthic assemblages of Bahía San Sebastián (Tierra del Fuego,Argentina)

Bahía San Sebastián (BSS), a shallow and protected environment on the eastern coast of Tierra del Fuego (Argentina), is a prime habitat for several species of nearctic migratory birds that visit the area during summer to feed in its huge intertidal mudflats. The area has also great economic value due to the extraction and transport of hydrocarbons. Twenty-three dredge stations were analysed and presence/absence data were used to classify stations and species by cluster analysis. Two algae and 113 taxa of macrobenthic invertebrates from 12 animal phyla were identified. Species richness was one order of magnitude higher (mean 29.0 sp st⁻¹) in stations located outside or in the southern unprotected section of BSS than in most muddy or sandy stations within the bay (mean 3.7 sp st⁻¹). Hard bottom stations outside BSS were dominated by a rich assemblage of sessile filter-feeders, mainly bryozoans, hydrozoans, ascidians, sponges, and the bivalve Aulacomya atra. Soft bottom areas inside BSS were mainly populated by relatively few species of deposit-feeders, such as the orbiniid polychaete Phylo felix, which was particularly frequent and widespread. Shells of the clam Mulinia edulis are very common, representing one of the few hard substrata available for sessile species on soft bottoms. Epibenthic assemblages within BSS were dominated by the detritivorous isopod Serolis paradoxa and the crab Eurypodius latreillei. The macrobenthic fauna of BSS can be regarded as typical of the Magellan region, showing affinities with those of other localities around Tierra del Fuego, the Straits of Magellan and the southern Chilean fjords.     

Benthic community response to a passive fishing gear in a coastal lagoon (South Brazil)

The influence of a passive shrimp fishing gear on benthic communities was studied at Laguna Estuarine System (South Brazil), a shallow choked coastal lagoon. The gear is composed by a group of fyke nets (25 mm mesh size) set in contact to the bottom, fixed with stakes forming a cage-like structure (around 30 m²). Samplings were conducted in the two main fishery areas of the estuarine system, Mirim (sand bottoms) and Imaruí (muddy bottoms) lagoon, in May 2005. In each area, 10 fyke net enclosures and 10 nearby sites without nets (control) were sampled. Microphytobenthos biomass (chlorophyll a and phaeopigments), number of taxa/species, density, Hill’s number N ₁ and N ₂, and estimated number of species (ES₁₀₀) were used as community attributes. For the nematodes, values of the maturity index and abundance of Wieser’s feeding type were used as well. The effects of the small-scale passive shrimp fishing gear on the coastal lagoon bottoms were dependent on the benthic component analyzed and the type of sediment. Whereas macrofauna was not affected by the net enclosures, meiofauna and nematodes, particularly from the mud sites were. At the sand site, the fyke net enclosures caused a decrease in the microphytobenthos biomass and changed the relative abundances of non-selective deposit feeding and epigrowth-feeding nematodes. The results indicated that small-scale static nets, such as the studied fyke enclosures, produced low intensity levels of disturbance. However, the enclosed area by nets at Laguna had already reached around 25,000 m². Given the large proportion of the coastal population involved and the area closed by nets, management policies should consider site-specific differences within the same estuarine system.     

Appraisal of contaminants in sediments of the Inner Bristol Channel and Severn Estuary

In the inner Bristol Channel and Severn Estuary, most contaminated stations were in muddy, depositional areas of the estuary, particularly along the Welsh coast between the Rivers Taff and Usk, and also on the English coast between Avonmouth and Severn Beach. Some deeper areas, dominated by sand and mixed sediments, also showed contaminant concentrations in excess of those predicted from sediment texture, organic matter, and aluminium or iron concentrations.
Concentrations of lead, copper, chromium, nickel and zinc have decreased in the muddy sediments since the 1970s, but only lead has decreased in sand. With the exception of zinc, which is high in the Severn, trace element concentrations were comparable to those from other British estuaries.
Landward of the proposed barrage, contaminants are associated with the sub-estuaries and muddy areas at their confluence with the main estuary. Post-barrage effects on contaminants will be focused in these muddy areas. However, fine sediment deposition on what are now sandy areas would increase their contaminant burden unless calcium build-up from the resulting molluscan fauna has the antagonistic effect of contaminant dilution in the sediment.